BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2886c
Length=295
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610023|ref|NP_217402.1| resolvase [Mycobacterium tuberculos... 582 3e-164
gi|148824076|ref|YP_001288829.1| resolvase [Mycobacterium tuberc... 580 8e-164
gi|340627876|ref|YP_004746328.1| putative resolvase [Mycobacteri... 575 2e-162
gi|326904500|gb|EGE51433.1| resolvase [Mycobacterium tuberculosi... 434 1e-119
gi|167969514|ref|ZP_02551791.1| IS1539 resolvase [Mycobacterium ... 378 7e-103
gi|294994020|ref|ZP_06799711.1| resolvase [Mycobacterium tubercu... 376 2e-102
gi|289444442|ref|ZP_06434186.1| resolvase [Mycobacterium tubercu... 343 1e-92
gi|326904407|gb|EGE51340.1| resolvase [Mycobacterium tuberculosi... 259 4e-67
gi|289444543|ref|ZP_06434287.1| resolvase [Mycobacterium tubercu... 251 1e-64
gi|15607745|ref|NP_215119.1| resolvase [Mycobacterium tuberculos... 248 9e-64
gi|15610116|ref|NP_217495.1| resolvase [Mycobacterium tuberculos... 247 2e-63
gi|15609929|ref|NP_217308.1| resolvase [Mycobacterium tuberculos... 245 5e-63
gi|289575490|ref|ZP_06455717.1| resolvase [Mycobacterium tubercu... 245 6e-63
gi|31793968|ref|NP_856461.1| resolvase [Mycobacterium bovis AF21... 245 6e-63
gi|31794155|ref|NP_856648.1| resolvase [Mycobacterium bovis AF21... 245 7e-63
gi|289446158|ref|ZP_06435902.1| resolvase [Mycobacterium tubercu... 245 8e-63
gi|15610964|ref|NP_218345.1| resolvase [Mycobacterium tuberculos... 241 1e-61
gi|167969029|ref|ZP_02551306.1| hypothetical resolvase [Mycobact... 239 5e-61
gi|340628797|ref|YP_004747249.1| putative resolvase [Mycobacteri... 238 7e-61
gi|289747670|ref|ZP_06507048.1| resolvase [Mycobacterium tubercu... 238 9e-61
gi|298527303|ref|ZP_07014712.1| conserved hypothetical protein [... 237 2e-60
gi|306774711|ref|ZP_07413048.1| resolvase [Mycobacterium tubercu... 235 7e-60
gi|333921217|ref|YP_004494798.1| putative resolvase [Amycolicico... 231 1e-58
gi|333921804|ref|YP_004495385.1| putative resolvase [Amycolicico... 229 5e-58
gi|167969943|ref|ZP_02552220.1| hypothetical resolvase [Mycobact... 226 3e-57
gi|333920658|ref|YP_004494239.1| putative resolvase [Amycolicico... 226 4e-57
gi|294993043|ref|ZP_06798734.1| resolvase [Mycobacterium tubercu... 219 6e-55
gi|86741374|ref|YP_481774.1| resolvase-like protein [Frankia sp.... 214 1e-53
gi|158312541|ref|YP_001505049.1| resolvase domain-containing pro... 204 2e-50
gi|289749103|ref|ZP_06508481.1| resolvase [Mycobacterium tubercu... 202 4e-50
gi|86742114|ref|YP_482514.1| resolvase-like protein [Frankia sp.... 191 2e-46
gi|240171118|ref|ZP_04749777.1| putative resolvase [Mycobacteriu... 189 4e-46
gi|288921956|ref|ZP_06416167.1| Resolvase domain protein [Franki... 183 3e-44
gi|289571177|ref|ZP_06451404.1| conserved hypothetical protein [... 183 4e-44
gi|328905690|gb|EGG25468.1| resolvase [Propionibacterium humerus... 182 4e-44
gi|315081078|gb|EFT53054.1| resolvase protein [Propionibacterium... 182 4e-44
gi|327446282|gb|EGE92936.1| resolvase protein [Propionibacterium... 182 5e-44
gi|289752977|ref|ZP_06512355.1| resolvase [Mycobacterium tubercu... 182 5e-44
gi|314973967|gb|EFT18063.1| resolvase protein [Propionibacterium... 182 5e-44
gi|314929732|gb|EFS93563.1| resolvase protein [Propionibacterium... 182 7e-44
gi|315092548|gb|EFT64524.1| resolvase protein [Propionibacterium... 181 1e-43
gi|340625932|ref|YP_004744384.1| putative resolvase [Mycobacteri... 181 1e-43
gi|15608061|ref|NP_215436.1| resolvase [Mycobacterium tuberculos... 181 1e-43
gi|295696699|ref|YP_003589937.1| Resolvase domain-containing pro... 177 2e-42
gi|258512473|ref|YP_003185907.1| Resolvase domain-containing pro... 175 7e-42
gi|158313451|ref|YP_001505959.1| resolvase domain-containing pro... 175 8e-42
gi|167629538|ref|YP_001680037.1| resolvase, n terminal domain [H... 174 1e-41
gi|339287910|gb|AEJ42020.1| Resolvase domain protein [Alicycloba... 173 3e-41
gi|339290995|gb|AEJ45105.1| Resolvase domain protein [Alicycloba... 170 3e-40
gi|158317728|ref|YP_001510236.1| resolvase domain-containing pro... 170 3e-40
>gi|15610023|ref|NP_217402.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15842428|ref|NP_337465.1| IS1539 resolvase [Mycobacterium tuberculosis CDC1551]
gi|31794062|ref|NP_856555.1| resolvase [Mycobacterium bovis AF2122/97]
43 more sequence titles
Length=295
Score = 582 bits (1500), Expect = 3e-164, Method: Compositional matrix adjust.
Identities = 295/295 (100%), Positives = 295/295 (100%), Gaps = 0/295 (0%)
Query 1 MSRILTHVPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT 60
MSRILTHVPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT
Sbjct 1 MSRILTHVPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT 60
Query 61 PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW 120
PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW
Sbjct 61 PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW 120
Query 121 LRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATA 180
LRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATA
Sbjct 121 LRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATA 180
Query 181 EQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGR 240
EQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGR
Sbjct 181 EQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGR 240
Query 241 ELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAARAVAAAARAGGHEAR 295
ELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAARAVAAAARAGGHEAR
Sbjct 241 ELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAARAVAAAARAGGHEAR 295
>gi|148824076|ref|YP_001288829.1| resolvase [Mycobacterium tuberculosis F11]
gi|148722603|gb|ABR07228.1| hypothetical resolvase [Mycobacterium tuberculosis F11]
Length=295
Score = 580 bits (1495), Expect = 8e-164, Method: Compositional matrix adjust.
Identities = 294/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%)
Query 1 MSRILTHVPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT 60
MSRILTHVPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT
Sbjct 1 MSRILTHVPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT 60
Query 61 PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW 120
PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW
Sbjct 61 PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW 120
Query 121 LRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATA 180
LRVGRLPVPARRVGRVILVDEPAGQPGRWGRT VCARLSSADQKVDLDRQVVGVTAWATA
Sbjct 121 LRVGRLPVPARRVGRVILVDEPAGQPGRWGRTVVCARLSSADQKVDLDRQVVGVTAWATA 180
Query 181 EQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGR 240
EQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGR
Sbjct 181 EQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGR 240
Query 241 ELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAARAVAAAARAGGHEAR 295
ELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAARAVAAAARAGGHEAR
Sbjct 241 ELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAARAVAAAARAGGHEAR 295
>gi|340627876|ref|YP_004746328.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
gi|340006066|emb|CCC45238.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=295
Score = 575 bits (1483), Expect = 2e-162, Method: Compositional matrix adjust.
Identities = 292/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%)
Query 1 MSRILTHVPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT 60
MSRILT+VPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT
Sbjct 1 MSRILTYVPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT 60
Query 61 PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW 120
PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW
Sbjct 61 PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW 120
Query 121 LRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATA 180
LRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATA
Sbjct 121 LRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATA 180
Query 181 EQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGR 240
EQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGR
Sbjct 181 EQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGR 240
Query 241 ELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAARAVAAAARAGGHEAR 295
ELVVVDSAD DDDVVGDITEILTS+CARLYGKRAAGNRAARAVAAAARAGGHEAR
Sbjct 241 ELVVVDSADGDDDVVGDITEILTSMCARLYGKRAAGNRAARAVAAAARAGGHEAR 295
>gi|326904500|gb|EGE51433.1| resolvase [Mycobacterium tuberculosis W-148]
gi|328457800|gb|AEB03223.1| resolvase [Mycobacterium tuberculosis KZN 4207]
gi|339295724|gb|AEJ47835.1| resolvase [Mycobacterium tuberculosis CCDC5079]
gi|339299340|gb|AEJ51450.1| resolvase [Mycobacterium tuberculosis CCDC5180]
Length=223
Score = 434 bits (1115), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 222/223 (99%), Positives = 223/223 (100%), Gaps = 0/223 (0%)
Query 73 VLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARR 132
+LPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARR
Sbjct 1 MLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARR 60
Query 133 VGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEV 192
VGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEV
Sbjct 61 VGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEV 120
Query 193 GSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDD 252
GSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDD
Sbjct 121 GSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDD 180
Query 253 DVVGDITEILTSICARLYGKRAAGNRAARAVAAAARAGGHEAR 295
DVVGDITEILTSICARLYGKRAAGNRAARAVAAAARAGGHEAR
Sbjct 181 DVVGDITEILTSICARLYGKRAAGNRAARAVAAAARAGGHEAR 223
>gi|167969514|ref|ZP_02551791.1| IS1539 resolvase [Mycobacterium tuberculosis H37Ra]
gi|254551957|ref|ZP_05142404.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|297635503|ref|ZP_06953283.1| resolvase [Mycobacterium tuberculosis KZN 4207]
25 more sequence titles
Length=195
Score = 378 bits (970), Expect = 7e-103, Method: Compositional matrix adjust.
Identities = 195/195 (100%), Positives = 195/195 (100%), Gaps = 0/195 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS
Sbjct 1 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR
Sbjct 61 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 280
DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA
Sbjct 121 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 180
Query 281 RAVAAAARAGGHEAR 295
RAVAAAARAGGHEAR
Sbjct 181 RAVAAAARAGGHEAR 195
>gi|294994020|ref|ZP_06799711.1| resolvase [Mycobacterium tuberculosis 210]
Length=195
Score = 376 bits (966), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 194/195 (99%), Positives = 194/195 (99%), Gaps = 0/195 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS
Sbjct 1 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR
Sbjct 61 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 280
DRLGRFGFECVQAVLAAD RELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA
Sbjct 121 DRLGRFGFECVQAVLAADARELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 180
Query 281 RAVAAAARAGGHEAR 295
RAVAAAARAGGHEAR
Sbjct 181 RAVAAAARAGGHEAR 195
>gi|289444442|ref|ZP_06434186.1| resolvase [Mycobacterium tuberculosis T46]
gi|289417361|gb|EFD14601.1| resolvase [Mycobacterium tuberculosis T46]
Length=171
Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 171/171 (100%), Positives = 171/171 (100%), Gaps = 0/171 (0%)
Query 1 MSRILTHVPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT 60
MSRILTHVPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT
Sbjct 1 MSRILTHVPGRTVNRSYALPALVGSAAGRLSGNHSHGREAYIALPQWACSRQPSTPPLQT 60
Query 61 PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW 120
PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW
Sbjct 61 PGRINALWSLRPVLPMPGRGCQLLRLGGRWLSVVCCRNGSMNLVVWAEGNGVARVIAYRW 120
Query 121 LRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQV 171
LRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQV
Sbjct 121 LRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQV 171
>gi|326904407|gb|EGE51340.1| resolvase [Mycobacterium tuberculosis W-148]
gi|328457897|gb|AEB03320.1| resolvase [Mycobacterium tuberculosis KZN 4207]
Length=201
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 133/186 (72%), Positives = 147/186 (80%), Gaps = 0/186 (0%)
Query 93 VVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRT 152
+ CCRN SMNL VWAE NGVARV AYRW G LPVPAR+ GR+ILVD+ R RT
Sbjct 1 MACCRNNSMNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRART 60
Query 153 AVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTV 212
AV AR+SSADQK DLDRQV VTAWAT EQI V KVVTEVGSAL G RR FL LL DP+V
Sbjct 61 AVYARVSSADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSV 120
Query 213 RRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK 272
+RIV++ RDR RFG E V+A LAA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct 121 KRIVVEHRDRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK 180
Query 273 RAAGNR 278
RAA NR
Sbjct 181 RAAQNR 186
>gi|289444543|ref|ZP_06434287.1| resolvase [Mycobacterium tuberculosis T46]
gi|289448651|ref|ZP_06438395.1| resolvase [Mycobacterium tuberculosis CPHL_A]
gi|289575686|ref|ZP_06455913.1| resolvase [Mycobacterium tuberculosis K85]
23 more sequence titles
Length=194
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/194 (70%), Positives = 149/194 (77%), Gaps = 1/194 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WAE NGVAR AYRW R G L V ARRVGR+ILVDEPAG G TAV AR+SS
Sbjct 1 MNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQK DLDRQV VTAWATA+Q+PV KVVTEVGSA RR FL+LL DP+V RIV++ R
Sbjct 61 ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 280
DR R G + VQA AA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGKRAA NR
Sbjct 121 DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK 180
Query 281 RAVAAAARAGGHEA 294
RA+AAAA HEA
Sbjct 181 RALAAAA-GEDHEA 193
>gi|15607745|ref|NP_215119.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15840006|ref|NP_335043.1| IS1536 resolvase [Mycobacterium tuberculosis CDC1551]
gi|31791787|ref|NP_854280.1| resolvase [Mycobacterium bovis AF2122/97]
39 more sequence titles
Length=202
Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 129/185 (70%), Positives = 144/185 (78%), Gaps = 0/185 (0%)
Query 93 VVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRT 152
+ CCRN MNL WAE NGVARV AYRW G LPVPAR+VGR+ILVDE A + G +T
Sbjct 1 MACCRNRGMNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKT 60
Query 153 AVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTV 212
AV AR+SSADQK DLDRQV VT+WATAEQIPV KVVTEVGS L G RR F +L D +V
Sbjct 61 AVYARVSSADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSV 120
Query 213 RRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK 272
RIV++ RDR RFG E V A LAA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct 121 TRIVVEHRDRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGK 180
Query 273 RAAGN 277
RAA N
Sbjct 181 RAAQN 185
>gi|15610116|ref|NP_217495.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15842533|ref|NP_337570.1| IS1538 resolvase [Mycobacterium tuberculosis CDC1551]
gi|148662829|ref|YP_001284352.1| IS1538 resolvase [Mycobacterium tuberculosis H37Ra]
47 more sequence titles
Length=194
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/194 (70%), Positives = 148/194 (77%), Gaps = 1/194 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WAE NGVA AYRW R G L V ARRVGR+ILVDEPAG G TAV AR+SS
Sbjct 1 MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQK DLDRQV VTAWATA+Q+PV KVVTEVGSA RR FL+LL DP+V RIV++ R
Sbjct 61 ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 280
DR R G + VQA AA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGKRAA NR
Sbjct 121 DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK 180
Query 281 RAVAAAARAGGHEA 294
RA+AAAA HEA
Sbjct 181 RALAAAA-GEDHEA 193
>gi|15609929|ref|NP_217308.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15842330|ref|NP_337367.1| IS1602 resolvase [Mycobacterium tuberculosis CDC1551]
gi|121638672|ref|YP_978896.1| putative resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
74 more sequence titles
Length=193
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/178 (72%), Positives = 141/178 (80%), Gaps = 0/178 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL VWAE NGVARV AYRW G LPVPAR+ GR+ILVD+ R RTAV AR+SS
Sbjct 1 MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQK DLDRQV VTAWAT EQI V KVVTEVGSAL G RR FL LL DP+V+RIV++ R
Sbjct 61 ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNR 278
DR RFG E V+A LAA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGKRAA NR
Sbjct 121 DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNR 178
>gi|289575490|ref|ZP_06455717.1| resolvase [Mycobacterium tuberculosis K85]
gi|289539921|gb|EFD44499.1| resolvase [Mycobacterium tuberculosis K85]
Length=193
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/178 (72%), Positives = 141/178 (80%), Gaps = 0/178 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL VWAE NG+ARV AYRW G LPVPAR+ GR+ILVD+ R RTAV AR+SS
Sbjct 1 MNLAVWAERNGIARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQK DLDRQV VTAWAT EQI V KVVTEVGSAL G RR FL LL DP+V+RIV++ R
Sbjct 61 ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNR 278
DR RFG E V+A LAA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGKRAA NR
Sbjct 121 DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNR 178
>gi|31793968|ref|NP_856461.1| resolvase [Mycobacterium bovis AF2122/97]
gi|31619562|emb|CAD95000.1| POSSIBLE RESOLVASE [Mycobacterium bovis AF2122/97]
Length=193
Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/178 (72%), Positives = 141/178 (80%), Gaps = 0/178 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL VWAE NGVARV YRW G LPVPAR+ GR+ILVD+ R RTAV AR+SS
Sbjct 1 MNLAVWAERNGVARVTVYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQK DLDRQV VTAWATAEQI V KVVTEVGSAL G RR FL LL DP+V+RIV++ R
Sbjct 61 ADQKPDLDRQVARVTAWATAEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNR 278
DR RFG E V+A LAA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGKRAA NR
Sbjct 121 DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNR 178
>gi|31794155|ref|NP_856648.1| resolvase [Mycobacterium bovis AF2122/97]
gi|121638860|ref|YP_979084.1| putative resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991352|ref|YP_002646041.1| putative resolvase [Mycobacterium bovis BCG str. Tokyo 172]
gi|31619750|emb|CAD96690.1| PROBABLE RESOLVASE [Mycobacterium bovis AF2122/97]
gi|121494508|emb|CAL72989.1| Probable resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224774467|dbj|BAH27273.1| putative resolvase [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602899|emb|CCC65577.1| probable resolvase [Mycobacterium bovis BCG str. Moreau RDJ]
Length=194
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 133/194 (69%), Positives = 147/194 (76%), Gaps = 1/194 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WAE NGVAR AYRW R G L V ARRVGR+ILVDEPAG G TAV AR+SS
Sbjct 1 MNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQK DLDRQV VTAWA A+Q+PV KVVTEVGSA RR FL+LL DP+V RIV++ R
Sbjct 61 ADQKADLDRQVARVTAWAAAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 280
DR R G + VQA AA GRELVVVDSA+V DD+V D+TEILTS+CARLYGKRAA NR
Sbjct 121 DRFCRLGSKYVQAAFAAQGRELVVVDSAEVGDDLVRDMTEILTSMCARLYGKRAAENRTK 180
Query 281 RAVAAAARAGGHEA 294
RA+AAAA HEA
Sbjct 181 RALAAAA-GEDHEA 193
>gi|289446158|ref|ZP_06435902.1| resolvase [Mycobacterium tuberculosis CPHL_A]
gi|289419116|gb|EFD16317.1| resolvase [Mycobacterium tuberculosis CPHL_A]
Length=202
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 128/185 (70%), Positives = 143/185 (78%), Gaps = 0/185 (0%)
Query 93 VVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRT 152
+ CCRN MNL WAE NGVARV AYRW G LPVPAR+VGR+ILVDE A + G +T
Sbjct 1 MACCRNRGMNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKT 60
Query 153 AVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTV 212
AV AR+SSADQK DLDRQV VT+WATAEQIPV KVVTEVGS L G RR F +L D +V
Sbjct 61 AVYARVSSADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSV 120
Query 213 RRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK 272
RIV++ RDR RFG E V A LAA GRELVVVDSA+ DDD+V D+TEILTS+CARLYGK
Sbjct 121 TRIVVEHRDRFCRFGSEYVHAALAAQGRELVVVDSAEGDDDLVWDMTEILTSMCARLYGK 180
Query 273 RAAGN 277
RAA N
Sbjct 181 RAAQN 185
>gi|15610964|ref|NP_218345.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15843452|ref|NP_338489.1| IS1537 resolvase [Mycobacterium tuberculosis CDC1551]
gi|31795002|ref|NP_857495.1| resolvase [Mycobacterium bovis AF2122/97]
40 more sequence titles
Length=203
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/193 (67%), Positives = 149/193 (78%), Gaps = 0/193 (0%)
Query 91 LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG 150
+SVVCCRN MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA + G
Sbjct 1 MSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
Query 151 RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP 210
RT V AR+SSADQ+ DLDR+V VTAWAT++ + V KVV E G AL G RR F LLGDP
Sbjct 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
Query 211 TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLY 270
V RIV++ RDR FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLY
Sbjct 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY 180
Query 271 GKRAAGNRAARAV 283
G+RAA N A RA+
Sbjct 181 GERAAQNGAKRAL 193
>gi|167969029|ref|ZP_02551306.1| hypothetical resolvase [Mycobacterium tuberculosis H37Ra]
gi|254230942|ref|ZP_04924269.1| hypothetical protein TBCG_00600 [Mycobacterium tuberculosis C]
gi|254549562|ref|ZP_05140009.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
26 more sequence titles
Length=194
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 125/177 (71%), Positives = 139/177 (79%), Gaps = 0/177 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WAE NGVARV AYRW G LPVPAR+VGR+ILVDE A + G +TAV AR+SS
Sbjct 1 MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQK DLDRQV VT+WATAEQIPV KVVTEVGS L G RR F +L D +V RIV++ R
Sbjct 61 ADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGN 277
DR RFG E V A LAA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGKRAA N
Sbjct 121 DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN 177
>gi|340628797|ref|YP_004747249.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
gi|340006987|emb|CCC46178.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=203
Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 127/193 (66%), Positives = 147/193 (77%), Gaps = 0/193 (0%)
Query 91 LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG 150
+SVVCCRN MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA + G
Sbjct 1 MSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
Query 151 RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP 210
RT V AR+SSADQ+ DLDR+V VTAWAT++ + V KVV E G AL G RR F LLGDP
Sbjct 61 RTVVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
Query 211 TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLY 270
V RIV + RDR FG E V+A L A GRELVVVD A+VDDD+VGD+ EILTS+CARLY
Sbjct 121 VVTRIVAEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMIEILTSMCARLY 180
Query 271 GKRAAGNRAARAV 283
G+RAA N A RA+
Sbjct 181 GERAAQNGAKRAL 193
>gi|289747670|ref|ZP_06507048.1| resolvase [Mycobacterium tuberculosis 02_1987]
gi|289688198|gb|EFD55686.1| resolvase [Mycobacterium tuberculosis 02_1987]
Length=203
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 127/193 (66%), Positives = 148/193 (77%), Gaps = 0/193 (0%)
Query 91 LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG 150
+SVVCCRN MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA + G
Sbjct 1 MSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
Query 151 RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP 210
RT V AR+SSADQ+ DLDR+V VTAWAT++ + V KVV E G AL G RR F LLGDP
Sbjct 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
Query 211 TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLY 270
V RIV++ RDR FG E V+A L A GRELVVVD +VDDD+VGD+TEILTS+CARLY
Sbjct 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLPEVDDDLVGDMTEILTSMCARLY 180
Query 271 GKRAAGNRAARAV 283
G+RAA N A RA+
Sbjct 181 GERAAQNGAKRAL 193
>gi|298527303|ref|ZP_07014712.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298497097|gb|EFI32391.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|328460604|gb|AEB06027.1| resolvase [Mycobacterium tuberculosis KZN 4207]
Length=201
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/191 (66%), Positives = 147/191 (77%), Gaps = 0/191 (0%)
Query 93 VVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRT 152
+VCCRN MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA + GRT
Sbjct 1 MVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT 60
Query 153 AVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTV 212
V AR+SSADQ+ DLDR+V VTAWAT++ + V KVV E G AL G RR F LLGDP V
Sbjct 61 LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV 120
Query 213 RRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK 272
RIV++ RDR FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLYG+
Sbjct 121 TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE 180
Query 273 RAAGNRAARAV 283
RAA N A RA+
Sbjct 181 RAAQNGAKRAL 191
>gi|306774711|ref|ZP_07413048.1| resolvase [Mycobacterium tuberculosis SUMu001]
gi|306970815|ref|ZP_07483476.1| resolvase [Mycobacterium tuberculosis SUMu010]
gi|307078538|ref|ZP_07487708.1| resolvase [Mycobacterium tuberculosis SUMu011]
gi|308216606|gb|EFO76005.1| resolvase [Mycobacterium tuberculosis SUMu001]
gi|308359602|gb|EFP48453.1| resolvase [Mycobacterium tuberculosis SUMu010]
gi|308363530|gb|EFP52381.1| resolvase [Mycobacterium tuberculosis SUMu011]
Length=194
Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/177 (71%), Positives = 138/177 (78%), Gaps = 0/177 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WAE NGVARV AYRW G LPVPAR+VGR+ILVDE A + G +TAV AR+SS
Sbjct 1 MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQK DLDRQV VT+WATAE IPV KVVTEVGS L G RR F +L D +V RIV++ R
Sbjct 61 ADQKSDLDRQVARVTSWATAEPIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGN 277
DR RFG E V A LAA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGKRAA N
Sbjct 121 DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN 177
>gi|333921217|ref|YP_004494798.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483438|gb|AEF41998.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=215
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/197 (68%), Positives = 147/197 (75%), Gaps = 0/197 (0%)
Query 91 LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG 150
LSVVC G MNL WA+ NGV RV AYRW R G LPVPAR+ G +ILV +P G
Sbjct 11 LSVVCGTTGHMNLATWAQRNGVGRVTAYRWFRSGSLPVPARKAGGLILVGDPTTNTQSHG 70
Query 151 RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP 210
RTAV A +SSADQK LDRQV VTAWA +E+I VGKVVTEVGSAL G R FL LL DP
Sbjct 71 RTAVYAGVSSADQKAGLDRQVARVTAWAASERIGVGKVVTEVGSALNGHRGKFLALLRDP 130
Query 211 TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLY 270
V RIV++ RDR RFG ECVQA LAA+G LVVVDS +VDDD+V D+TEILTS+CARLY
Sbjct 131 IVTRIVVEHRDRFCRFGSECVQAALAANGGALVVVDSCEVDDDLVRDMTEILTSMCARLY 190
Query 271 GKRAAGNRAARAVAAAA 287
GKRAA +RA RAVAA A
Sbjct 191 GKRAAVHRAKRAVAATA 207
>gi|333921804|ref|YP_004495385.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
gi|333484025|gb|AEF42585.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=195
Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/171 (70%), Positives = 135/171 (79%), Gaps = 0/171 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WA+ NGVARV AYRW R G LPVPAR+VGR+ILVD+PA + G TAV AR+SS
Sbjct 1 MNLATWAQRNGVARVTAYRWFRSGLLPVPARKVGRLILVDDPAAEMQSSGCTAVYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQK DL RQV VTAWAT +IPV KVVTEVGSAL G RR FL LL DP++ RIV++ R
Sbjct 61 ADQKADLHRQVARVTAWATDRRIPVDKVVTEVGSALNGHRRKFLALLRDPSIARIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYG 271
DR RFG E VQA LAA GRELVV+DS++VDDD+V D+TEILTS+CARLY
Sbjct 121 DRFCRFGSEYVQAALAAHGRELVVIDSSEVDDDLVRDMTEILTSMCARLYS 171
>gi|167969943|ref|ZP_02552220.1| hypothetical resolvase [Mycobacterium tuberculosis H37Ra]
gi|297636511|ref|ZP_06954291.1| resolvase [Mycobacterium tuberculosis KZN 4207]
gi|297733506|ref|ZP_06962624.1| resolvase [Mycobacterium tuberculosis KZN R506]
26 more sequence titles
Length=193
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/183 (67%), Positives = 141/183 (78%), Gaps = 0/183 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA + GRT V AR+SS
Sbjct 1 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQ+ DLDR+V VTAWAT++ + V KVV E G AL G RR F LLGDP V RIV++ R
Sbjct 61 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 280
DR FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLYG+RAA N A
Sbjct 121 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK 180
Query 281 RAV 283
RA+
Sbjct 181 RAL 183
>gi|333920658|ref|YP_004494239.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
gi|333482879|gb|AEF41439.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=215
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/197 (67%), Positives = 146/197 (75%), Gaps = 0/197 (0%)
Query 91 LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG 150
LSVVC MNL WA+ NGVARV AYRW R G LPVPAR+ G +ILV +P G
Sbjct 11 LSVVCGTTEHMNLATWAQRNGVARVTAYRWFRSGSLPVPARKAGGLILVGDPTTNTQSHG 70
Query 151 RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP 210
RTAV A +SSADQK LDRQV VTAWA +E+I VGKVVTEVGSAL G R FL LL DP
Sbjct 71 RTAVYAGVSSADQKAGLDRQVARVTAWAASERIGVGKVVTEVGSALNGHRGKFLALLRDP 130
Query 211 TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLY 270
V RIV++ RDR RFG E VQA LAA+G LVVVDS +VDDD+V D+TEILTS+CARLY
Sbjct 131 IVTRIVVEHRDRFCRFGSEYVQAALAANGGALVVVDSCEVDDDLVRDMTEILTSMCARLY 190
Query 271 GKRAAGNRAARAVAAAA 287
GKRAA +RA RAVAA A
Sbjct 191 GKRAAVHRAKRAVAATA 207
>gi|294993043|ref|ZP_06798734.1| resolvase [Mycobacterium tuberculosis 210]
gi|339296637|gb|AEJ48748.1| resolvase [Mycobacterium tuberculosis CCDC5079]
gi|339300234|gb|AEJ52344.1| resolvase [Mycobacterium tuberculosis CCDC5180]
Length=189
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/179 (66%), Positives = 138/179 (78%), Gaps = 0/179 (0%)
Query 105 VWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQK 164
+WAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA + GRT V AR+SSADQ+
Sbjct 1 MWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQR 60
Query 165 VDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLG 224
DLDR+V VTAWAT++ + V KVV E G AL G RR F LLGDP V RIV++ RDR
Sbjct 61 SDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFC 120
Query 225 RFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAARAV 283
FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLYG+RAA N A RA+
Sbjct 121 WFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAKRAL 179
>gi|86741374|ref|YP_481774.1| resolvase-like protein [Frankia sp. CcI3]
gi|86568236|gb|ABD12045.1| Resolvase-like [Frankia sp. CcI3]
Length=190
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/177 (67%), Positives = 133/177 (76%), Gaps = 1/177 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WAE GVA V A RW G+LPVPARRVG +ILV EP QP G TAV AR+SS
Sbjct 1 MNLKEWAESQGVAYVTARRWYAAGKLPVPARRVGGLILVGEP-DQPTGDGLTAVYARVSS 59
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQ+ DLDRQV VTAWAT + +PV KVVTEVGSAL G RR FL LL DP V IV++ R
Sbjct 60 ADQRPDLDRQVARVTAWATGQNLPVDKVVTEVGSALNGHRRKFLALLRDPDVATIVVEYR 119
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGN 277
DR RFG E V+A L+A GR L+VVD +VDDD+VGD+TEILTS+CARLYG+RAA N
Sbjct 120 DRFARFGAEYVEAALSAQGRRLLVVDPGEVDDDLVGDVTEILTSLCARLYGRRAAVN 176
>gi|158312541|ref|YP_001505049.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
gi|158317424|ref|YP_001509932.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
gi|158107946|gb|ABW10143.1| Resolvase domain [Frankia sp. EAN1pec]
gi|158112829|gb|ABW15026.1| Resolvase domain [Frankia sp. EAN1pec]
Length=190
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/171 (64%), Positives = 125/171 (74%), Gaps = 1/171 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WAE GVA V A RW G+LPVPAR+VG +ILV EP +P G V AR+SS
Sbjct 1 MNLKEWAESQGVAYVTAQRWFHAGKLPVPARKVGGLILVGEP-DRPATSGTVVVYARVSS 59
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
ADQK DLDRQV VT WAT + +PV +VVTEVGSAL G RR FL LL DP IV++ R
Sbjct 60 ADQKSDLDRQVACVTGWATGQGLPVDRVVTEVGSALNGHRRKFLALLRDPAATTIVVEHR 119
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYG 271
DR RFG E V+A LAA+GR L+VVD A+VDDD+V DITEILTS+CARLYG
Sbjct 120 DRFARFGAEYVEAALAANGRRLLVVDPAEVDDDLVRDITEILTSMCARLYG 170
>gi|289749103|ref|ZP_06508481.1| resolvase [Mycobacterium tuberculosis T92]
gi|289689690|gb|EFD57119.1| resolvase [Mycobacterium tuberculosis T92]
Length=172
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/155 (70%), Positives = 123/155 (80%), Gaps = 0/155 (0%)
Query 123 VGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATAEQ 182
+G PVPAR+VGR+ILVDE A + G +TAV AR+SSADQK DLDRQV VT+WATAEQ
Sbjct 1 MGSCPVPARKVGRLILVDELASEAGAQPKTAVYARVSSADQKSDLDRQVARVTSWATAEQ 60
Query 183 IPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGREL 242
IPV KVVTEVGS L G RR F +L D +V RIV++ RDR RFG E V A LAA GREL
Sbjct 61 IPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHRDRFCRFGSEYVHAALAAQGREL 120
Query 243 VVVDSADVDDDVVGDITEILTSICARLYGKRAAGN 277
VVVDSA+VDDD+V D+TEILTS+CARLYGKRAA N
Sbjct 121 VVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN 155
>gi|86742114|ref|YP_482514.1| resolvase-like protein [Frankia sp. CcI3]
gi|86568976|gb|ABD12785.1| Resolvase-like [Frankia sp. CcI3]
Length=197
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/174 (60%), Positives = 124/174 (72%), Gaps = 7/174 (4%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDE---PAGQPGRWGRTAVCAR 157
+NL WA NGV A RW R G LPVPAR+VG ++LVDE PAG+P V AR
Sbjct 8 VNLKEWAAANGVGYTTARRWYRDGLLPVPARKVGGLVLVDESTVPAGRP----VAVVYAR 63
Query 158 LSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVM 217
+SSADQK DLDRQV + WA ++ + VG+VVTEVGSAL G RR FL LL DP V IV+
Sbjct 64 VSSADQKPDLDRQVARIVTWAASQNLAVGRVVTEVGSALNGHRRKFLGLLRDPAVATIVV 123
Query 218 KRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYG 271
+ RDR RFG E V+A L+A GR L+VVD +VDDD+VGD+TEILTS+CARLYG
Sbjct 124 EHRDRFARFGAEYVEAALSAQGRRLLVVDPGEVDDDLVGDVTEILTSLCARLYG 177
>gi|240171118|ref|ZP_04749777.1| putative resolvase [Mycobacterium kansasii ATCC 12478]
gi|296165344|ref|ZP_06847885.1| resolvase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899235|gb|EFG78700.1| resolvase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=193
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/191 (56%), Positives = 125/191 (66%), Gaps = 0/191 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WAE GV R AYRW R G LPVPA RVGR+ILV A G V AR+SS
Sbjct 1 MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKAAASVSGAAATVVVYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
DQ+ DLDRQV VTAWAT + VG+VV EVGS L G+R +L DP R IV++ R
Sbjct 61 HDQRSDLDRQVARVTAWATERDLEVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 280
DRL RFG E ++A L+A GR +VV D + DD+V D+ E+LTS+CARLYG+R A NRA
Sbjct 121 DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVRDMIEVLTSMCARLYGRRGARNRAM 180
Query 281 RAVAAAARAGG 291
RAV A R G
Sbjct 181 RAVTATKREPG 191
>gi|288921956|ref|ZP_06416167.1| Resolvase domain protein [Frankia sp. EUN1f]
gi|288346714|gb|EFC81032.1| Resolvase domain protein [Frankia sp. EUN1f]
Length=179
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/157 (64%), Positives = 116/157 (74%), Gaps = 1/157 (0%)
Query 115 VIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGV 174
V AYRW R G+LPVPARRVGR+ILV EP G T V AR+SSADQK DLDRQV V
Sbjct 4 VTAYRWFREGKLPVPARRVGRLILV-EPDAVERPAGLTVVYARVSSADQKSDLDRQVARV 62
Query 175 TAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAV 234
T WAT + V +VVTEVGSAL G RR FL LL DP V IV++ R + RFG E V+A
Sbjct 63 TGWATGQGRAVDRVVTEVGSALNGHRRKFLALLRDPDVSTIVVEHRGKFARFGAENVEAA 122
Query 235 LAADGRELVVVDSADVDDDVVGDITEILTSICARLYG 271
LAA+GREL+VVD A+VDDD+V D+TEILTS+C R+YG
Sbjct 123 LAANGRELLVVDPAEVDDDLVRDMTEILTSLCVRMYG 159
>gi|289571177|ref|ZP_06451404.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289544931|gb|EFD48579.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=162
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/160 (66%), Positives = 115/160 (72%), Gaps = 3/160 (1%)
Query 91 LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG 150
+SV C RN MNL WAE NGVAR AYRW R G L V ARRVGR+ILVDEPAG G
Sbjct 1 MSVACGRNRDMNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRS 60
Query 151 RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP 210
TAV AR+SSADQK DLDRQV VTAWATA+Q+PV KVVTEVGSA RR FL+LL DP
Sbjct 61 PTAVYARVSSADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDP 120
Query 211 TVRRIVMKRRDRL--GRFGFECVQAVLAADGRELVVVDSA 248
+V RIV++ RDR+ G C Q AA GRELVVVDSA
Sbjct 121 SVHRIVVEHRDRVLPGWARSTCRQR-FAAQGRELVVVDSA 159
>gi|328905690|gb|EGG25468.1| resolvase [Propionibacterium humerusii P08]
Length=206
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/200 (49%), Positives = 132/200 (66%), Gaps = 6/200 (3%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVD-EPAGQPGRWG-----RTAV 154
MNL WA G++ A RW G +PVP RVGR++LVD + G P +T +
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVDCDEHGLPFEGSTPEPTKTII 60
Query 155 CARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRR 214
AR+ SADQK DLDRQ+ V WA+A+++ V VVTEVGS L G R+ F LL D +VR
Sbjct 61 YARVCSADQKPDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGSVRT 120
Query 215 IVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRA 274
I+++ RDR RFG E ++A L+A R L+VVD +++DD+V D+T++LTS+CARLYGKR+
Sbjct 121 ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS 180
Query 275 AGNRAARAVAAAARAGGHEA 294
A +RA +AV A GG E+
Sbjct 181 AKHRARKAVETAMTTGGEES 200
>gi|315081078|gb|EFT53054.1| resolvase protein [Propionibacterium acnes HL078PA1]
Length=206
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 133/200 (67%), Gaps = 6/200 (3%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVD-EPAGQP---GRWGRTAVC- 155
MNL WA G++ A RW G +PVP RRVGR++LVD + G P +G T V
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVDCDEHGLPFEGSTFGPTKVII 60
Query 156 -ARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRR 214
AR+SSADQK DLDRQ+ V WA+A+++ V VVTEVGS L G R+ F LL D +VR
Sbjct 61 YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGSVRT 120
Query 215 IVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRA 274
I+++ RDR RFG E ++A L+A R LVVVD +++DD+V D+T++LTS+CARLYGKR+
Sbjct 121 ILVEHRDRFCRFGSEYIEAALSAQNRRLVVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS 180
Query 275 AGNRAARAVAAAARAGGHEA 294
A +RA +AV G E+
Sbjct 181 AKHRARKAVETVMTTDGEES 200
>gi|327446282|gb|EGE92936.1| resolvase protein [Propionibacterium acnes HL043PA1]
gi|327451294|gb|EGE97948.1| resolvase protein [Propionibacterium acnes HL043PA2]
Length=206
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/200 (49%), Positives = 132/200 (66%), Gaps = 6/200 (3%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVD-EPAGQPGRWG-----RTAV 154
MNL WA G++ A RW G +PVP RRVGR++LVD + G P +T +
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVDCDEHGLPFEGSTFEPTKTII 60
Query 155 CARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRR 214
AR+SSADQK DLDRQ+ V WA+A+++ V VVTEVGS L G R+ F LL D +VR
Sbjct 61 YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGSVRT 120
Query 215 IVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRA 274
I+++ RDR RFG E ++A L+A R L+VVD +++DD+V D+T++LTS+CARLYGKR+
Sbjct 121 ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS 180
Query 275 AGNRAARAVAAAARAGGHEA 294
A +RA +AV G E+
Sbjct 181 AKHRARKAVENVMTTDGEES 200
>gi|289752977|ref|ZP_06512355.1| resolvase [Mycobacterium tuberculosis EAS054]
gi|289693564|gb|EFD60993.1| resolvase [Mycobacterium tuberculosis EAS054]
Length=193
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/191 (54%), Positives = 123/191 (65%), Gaps = 0/191 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WAE GV R AYRW R G LPVPA RVGR+ILV A + AR+SS
Sbjct 1 MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
D++ DLDRQV +TAWAT + VG+VV EVGS L G+R +L DP R IV+K R
Sbjct 61 HDRRSDLDRQVARLTAWATERDLGVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVKHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 280
DRL RFG E ++A L+A GR +VV D + DD+V D+ E+LT +CARLYG+R A NRA
Sbjct 121 DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM 180
Query 281 RAVAAAARAGG 291
RAV A R G
Sbjct 181 RAVTEAKREPG 191
>gi|314973967|gb|EFT18063.1| resolvase protein [Propionibacterium acnes HL053PA1]
Length=206
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/200 (49%), Positives = 132/200 (66%), Gaps = 6/200 (3%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVD-EPAGQPGRWG-----RTAV 154
MNL WA G++ A RW G +PVP RRVGR++LVD + G P +T +
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVDCDEHGLPFEGSTFEPTKTII 60
Query 155 CARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRR 214
AR+SSADQK DLDRQ+ V WA+A+++ V VVTEVGS L G R+ F LL D +VR
Sbjct 61 YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGSVRT 120
Query 215 IVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRA 274
I+++ RDR RFG E ++A L+A R LVVVD ++++D+V D+T++LTS+CARLYGKR+
Sbjct 121 ILVEHRDRFCRFGSEYIEAALSAQNRRLVVVDDKEIENDLVQDMTDVLTSMCARLYGKRS 180
Query 275 AGNRAARAVAAAARAGGHEA 294
A +RA +AV G E+
Sbjct 181 AKHRARKAVETVMTTDGEES 200
>gi|314929732|gb|EFS93563.1| resolvase protein [Propionibacterium acnes HL044PA1]
Length=206
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 132/200 (66%), Gaps = 6/200 (3%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVD-EPAGQPGRWG-----RTAV 154
MNL WA G++ A RW G +PVP RVGR++LVD + G P +T +
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVDCDEHGLPFEGSTPEPTKTII 60
Query 155 CARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRR 214
AR+ SADQK DLDRQ+ V WA+A+++ V VVTEVGS L G R+ F LL D +VR
Sbjct 61 YARVCSADQKPDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGSVRT 120
Query 215 IVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRA 274
I+++ RDR RFG E ++A L+A R L+VVD +++DD+V D+T++LTS+CARLYGKR+
Sbjct 121 ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS 180
Query 275 AGNRAARAVAAAARAGGHEA 294
A +RA +A+ A GG E+
Sbjct 181 AKHRARKAMETAMTTGGEES 200
>gi|315092548|gb|EFT64524.1| resolvase protein [Propionibacterium acnes HL110PA4]
Length=206
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 131/200 (66%), Gaps = 6/200 (3%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVD-EPAGQPGRWG-----RTAV 154
MNL WA G++ A RW G +PVP RVGR++LVD + G P +T +
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVDCDEHGLPFEGSTFEPTKTII 60
Query 155 CARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRR 214
AR+SSADQK DLDRQ+ V WA+A+++ V VVTEVGS L G R+ F LL D +VR
Sbjct 61 YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGSVRT 120
Query 215 IVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRA 274
I+++ RDR RFG E ++A L+A R L+VVD +++DD+V D+T++LTS+CARLYGKR+
Sbjct 121 ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS 180
Query 275 AGNRAARAVAAAARAGGHEA 294
A +RA +AV G E+
Sbjct 181 AKHRARKAVETVMITDGEES 200
>gi|340625932|ref|YP_004744384.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
gi|340004122|emb|CCC43259.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=193
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/191 (53%), Positives = 123/191 (65%), Gaps = 0/191 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WAE GV R AYRW R G LPVPA RVGR+ILV A + AR+SS
Sbjct 1 MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
D++ DLDRQV +TAWAT + VG+VV EVGS L G+R +L DP R IV++ R
Sbjct 61 HDRRSDLDRQVARLTAWATERDLGVGQVVREVGSGLNGKRPKLRRILSDPDARVIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 280
DRL RFG E ++A L+A GR +VV D + DD+V D+ E+LT +CARLYG+R A NRA
Sbjct 121 DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM 180
Query 281 RAVAAAARAGG 291
RAV A R G
Sbjct 181 RAVTEAKREPG 191
>gi|15608061|ref|NP_215436.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15840344|ref|NP_335381.1| IS1535 resolvase [Mycobacterium tuberculosis CDC1551]
gi|31792109|ref|NP_854602.1| resolvase [Mycobacterium bovis AF2122/97]
74 more sequence titles
Length=193
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/191 (53%), Positives = 123/191 (65%), Gaps = 0/191 (0%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 160
MNL WAE GV R AYRW R G LPVPA RVGR+ILV A + AR+SS
Sbjct 1 MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS 60
Query 161 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 220
D++ DLDRQV +TAWAT + VG+VV EVGS L G+R +L DP R IV++ R
Sbjct 61 HDRRSDLDRQVARLTAWATERDLGVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVEHR 120
Query 221 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRAA 280
DRL RFG E ++A L+A GR +VV D + DD+V D+ E+LT +CARLYG+R A NRA
Sbjct 121 DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM 180
Query 281 RAVAAAARAGG 291
RAV A R G
Sbjct 181 RAVTEAKREPG 191
>gi|295696699|ref|YP_003589937.1| Resolvase domain-containing protein [Bacillus tusciae DSM 2912]
gi|295412301|gb|ADG06793.1| Resolvase domain protein [Bacillus tusciae DSM 2912]
Length=192
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/191 (51%), Positives = 126/191 (66%), Gaps = 3/191 (1%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGR-VILVDEPAGQPGRWGRTAVCARLS 159
M L WA G++ + A+RW + G+LPVPAR+ ILVD P + GRT V AR+S
Sbjct 1 MKLSDWARQQGISYMTAWRWWKDGKLPVPARQTESGTILVDVPPSRKD--GRTVVYARVS 58
Query 160 SADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKR 219
S DQ+ DLDRQV +T WAT + V +VVTEVGS + G+R +L D V I+++
Sbjct 59 SHDQRSDLDRQVSRITQWATERDLVVDEVVTEVGSGMNGKRPKLRRILADARVTTIIVEH 118
Query 220 RDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRA 279
RDRL RFG E +++ LAA GR +VVVDS + DD+V D+ E+LTS CARLYG+R A NRA
Sbjct 119 RDRLARFGVEYLESALAAQGRHIVVVDSGETRDDLVRDMIEVLTSFCARLYGRRGARNRA 178
Query 280 ARAVAAAARAG 290
RAV AA + G
Sbjct 179 LRAVTAAKKDG 189
>gi|258512473|ref|YP_003185907.1| Resolvase domain-containing protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257479199|gb|ACV59518.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length=195
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/189 (49%), Positives = 124/189 (66%), Gaps = 3/189 (1%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGR-VILVDEPAGQPGRWGRTAVCARLS 159
M L WA NG++ A+RW++ GR+PVP + ILV EP +P A+ AR+S
Sbjct 1 MKLSDWARKNGISYKTAWRWVKEGRMPVPFEQTPSGTILVHEP--EPSTTNAVALYARVS 58
Query 160 SADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKR 219
SADQK DLDRQ+ + +A A+++ V K VTE+GS L G R + +L DP IV++
Sbjct 59 SADQKADLDRQIARLMEFAMAQKLVVVKAVTEIGSGLNGHRPKLMKMLSDPNAHTIVVEH 118
Query 220 RDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRA 279
RDRL RFGFE V+A LAA GR ++VV+ +V DD+V D+ E+LTS CARLYG+R+A +RA
Sbjct 119 RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMVEVLTSFCARLYGRRSARHRA 178
Query 280 ARAVAAAAR 288
RA+ R
Sbjct 179 KRALEVLER 187
>gi|158313451|ref|YP_001505959.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
gi|158108856|gb|ABW11053.1| Resolvase domain [Frankia sp. EAN1pec]
Length=182
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/163 (62%), Positives = 114/163 (70%), Gaps = 3/163 (1%)
Query 110 NGVARVIAYRWLRVGRLPVPARRVGRVILVDEPA-GQPGRWGRTAVCARLSSADQKVDLD 168
NGV A +W GRLPVPARRVG +ILVDEPA P G V A +SSADQ+ DLD
Sbjct 2 NGVGYSTARQWFLDGRLPVPARRVGGLILVDEPARSVPS--GTVVVYACVSSADQESDLD 59
Query 169 RQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGF 228
RQV + W E + VGKVVTEVGSAL G RR FL LL DP V IV++ RDR FG
Sbjct 60 RQVARIVRWTAGENLAVGKVVTEVGSALDGHRREFLALLRDPEVTTIVVEHRDRFAWFGA 119
Query 229 ECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYG 271
E V+A LAA GR L+VVD ++VDDD+V DITEILTS+CARLYG
Sbjct 120 EYVEAALAASGRRLLVVDPSEVDDDLVRDITEILTSMCARLYG 162
>gi|167629538|ref|YP_001680037.1| resolvase, n terminal domain [Heliobacterium modesticaldum Ice1]
gi|167592278|gb|ABZ84026.1| resolvase, n terminal domain [Heliobacterium modesticaldum Ice1]
Length=188
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/186 (49%), Positives = 125/186 (68%), Gaps = 4/186 (2%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGR-VILVDEPAGQPGRWGRTAVCARLS 159
M L WA+ NG+ A++W + G+LPVPA ++ IL+ E G+ A+ AR+S
Sbjct 1 MKLSEWAKKNGITYRTAWQWFKAGKLPVPAVQMPTGTILIQEGGKHEGK---VALYARVS 57
Query 160 SADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKR 219
SADQK DLDRQV + +A + VG+ VTE+GS L GRR + LL DP V+ IV++
Sbjct 58 SADQKSDLDRQVSRLLTYANEQGWDVGEAVTEIGSGLNGRRPKLMKLLADPKVKVIVVEH 117
Query 220 RDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRA 279
RDRL RFGFE V++ L A GR +VVVD +++ DD+V D+ E+LTS CARLYG+R+A N+A
Sbjct 118 RDRLMRFGFEYVESALVAQGRRIVVVDQSELKDDLVQDMIEVLTSFCARLYGRRSAANKA 177
Query 280 ARAVAA 285
+A+ A
Sbjct 178 KKAMEA 183
>gi|339287910|gb|AEJ42020.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length=208
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/190 (48%), Positives = 123/190 (65%), Gaps = 3/190 (1%)
Query 100 SMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRV-GRVILVDEPAGQPGRWGRTAVCARL 158
SM L WA NG+ A+RW++ GR+PVP + ILV EP + A+ AR+
Sbjct 13 SMKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVHEP--ESSTENAVALYARV 70
Query 159 SSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMK 218
SSADQK DLDRQ+ + +AT +++ V K VTE+GS L G R + LL +P IV++
Sbjct 71 SSADQKADLDRQIARLMEFATEQKLVVVKAVTEIGSGLNGHRPKLMKLLSNPDAHTIVVE 130
Query 219 RRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNR 278
RDRL RFGFE V+A LAA GR ++VV+ +V DD+V D+ E+LTS CARLYG+R+A +R
Sbjct 131 HRDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHR 190
Query 279 AARAVAAAAR 288
A RA+ R
Sbjct 191 AKRALEVFKR 200
>gi|339290995|gb|AEJ45105.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length=195
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/189 (48%), Positives = 121/189 (65%), Gaps = 3/189 (1%)
Query 101 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRV-GRVILVDEPAGQPGRWGRTAVCARLS 159
M L WA NG+ A+RW++ GR+PVP + ILV EP A+ AR+S
Sbjct 1 MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVREPESSTA--NAVALYARVS 58
Query 160 SADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKR 219
SADQK DLDRQ+ + +AT +++ V K VTE+GS L G R + LL +P IV++
Sbjct 59 SADQKDDLDRQIARLMEFATEQKLVVFKAVTEIGSGLNGHRPKLMKLLSNPNAHTIVVEH 118
Query 220 RDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGKRAAGNRA 279
RDRL RFGFE V+A LAA GR ++VV+ +V DD+V D+ E+LTS CARLYG+R+A +RA
Sbjct 119 RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRA 178
Query 280 ARAVAAAAR 288
RA+ R
Sbjct 179 KRALEVFKR 187
>gi|158317728|ref|YP_001510236.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
gi|158113133|gb|ABW15330.1| Resolvase domain [Frankia sp. EAN1pec]
Length=162
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/143 (66%), Positives = 108/143 (76%), Gaps = 2/143 (1%)
Query 128 VPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGK 187
+PARRVG +ILV+EPA G TAV AR+SSADQ+ DLDRQV V WA +PVGK
Sbjct 1 MPARRVGGLILVEEPARSA--TGMTAVYARVSSADQESDLDRQVARVVTWAAGRNLPVGK 58
Query 188 VVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDS 247
VVTEVGSAL G RR FL LLGDP V IV++ RDR RFG E V+A LAA GR L+VVD
Sbjct 59 VVTEVGSALGGDRREFLALLGDPRVSTIVVEHRDRFARFGAEYVEAALAACGRRLLVVDP 118
Query 248 ADVDDDVVGDITEILTSICARLY 270
A+VDDD+V D+TEILTS+CARLY
Sbjct 119 AEVDDDLVRDVTEILTSMCARLY 141
Lambda K H
0.323 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 489554810128
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40