BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2887
Length=139
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610024|ref|NP_217403.1| transcriptional regulatory protein ... 268 1e-70
gi|148824075|ref|YP_001288830.1| transcriptional regulator [Myco... 266 7e-70
gi|342858263|ref|ZP_08714918.1| transcriptional regulatory prote... 227 4e-58
gi|296171505|ref|ZP_06852769.1| MarR family transcriptional regu... 218 2e-55
gi|254819053|ref|ZP_05224054.1| MarR-family protein transcriptio... 218 2e-55
gi|183981835|ref|YP_001850126.1| transcriptional regulatory prot... 217 6e-55
gi|254776169|ref|ZP_05217685.1| MarR-family protein transcriptio... 216 8e-55
gi|118463730|ref|YP_882914.1| MarR family transcriptional regula... 214 2e-54
gi|118617640|ref|YP_905972.1| transcriptional regulatory protein... 214 4e-54
gi|41409051|ref|NP_961887.1| hypothetical protein MAP2953 [Mycob... 213 7e-54
gi|333991248|ref|YP_004523862.1| transcriptional regulator [Myco... 185 2e-45
gi|289751551|ref|ZP_06510929.1| transcriptional regulator [Mycob... 174 6e-42
gi|169627430|ref|YP_001701079.1| MarR family transcriptional reg... 144 4e-33
gi|118467907|ref|YP_886875.1| MarR family transcriptional regula... 136 1e-30
gi|296394013|ref|YP_003658897.1| MarR family transcriptional reg... 131 4e-29
gi|169627188|ref|YP_001700837.1| MarR family transcriptional reg... 131 4e-29
gi|169628076|ref|YP_001701725.1| putative HTH-type transcription... 128 3e-28
gi|317507298|ref|ZP_07965040.1| MarR family protein [Segniliparu... 118 3e-25
gi|302518183|ref|ZP_07270525.1| marR-family transcriptional regu... 108 2e-22
gi|326331646|ref|ZP_08197934.1| transcriptional regulator, MarR ... 108 2e-22
gi|342858504|ref|ZP_08715159.1| MarR family transcriptional regu... 108 4e-22
gi|302529913|ref|ZP_07282255.1| MarR family transcriptional regu... 107 4e-22
gi|169629012|ref|YP_001702661.1| MarR family transcriptional reg... 106 1e-21
gi|329936505|ref|ZP_08286241.1| MarR family transcriptional regu... 105 2e-21
gi|21225956|ref|NP_631735.1| MarR family transcriptional regulat... 105 3e-21
gi|271965566|ref|YP_003339762.1| MarR family transcriptional reg... 105 3e-21
gi|258653042|ref|YP_003202198.1| MarR family transcriptional reg... 104 6e-21
gi|323357223|ref|YP_004223619.1| transcriptional regulator [Micr... 103 9e-21
gi|312195993|ref|YP_004016054.1| MarR family transcriptional reg... 102 2e-20
gi|148271870|ref|YP_001221431.1| MarR family transcriptional reg... 98.6 3e-19
gi|170782494|ref|YP_001710827.1| MarR family transcriptional reg... 97.8 4e-19
gi|254387418|ref|ZP_05002660.1| marR-family transcriptional regu... 97.8 5e-19
gi|345008867|ref|YP_004811221.1| regulatory protein MarR [Strept... 97.1 9e-19
gi|329946953|ref|ZP_08294365.1| transcriptional regulator, MarR ... 96.7 1e-18
gi|296131385|ref|YP_003638635.1| MarR family transcriptional reg... 96.7 1e-18
gi|340359030|ref|ZP_08681530.1| MarR family transcriptional regu... 95.5 2e-18
gi|345003159|ref|YP_004806013.1| MarR family transcriptional reg... 95.1 3e-18
gi|260906874|ref|ZP_05915196.1| MarR family transcriptional regu... 94.7 4e-18
gi|269793678|ref|YP_003313133.1| transcriptional regulator [Sang... 92.8 1e-17
gi|320533972|ref|ZP_08034532.1| transcriptional regulator, MarR ... 92.4 2e-17
gi|311111769|ref|YP_003982991.1| MarR family transcriptional reg... 90.9 6e-17
gi|336319714|ref|YP_004599682.1| regulatory protein MarR [Cellvi... 90.5 7e-17
gi|256393280|ref|YP_003114844.1| MarR family transcriptional reg... 88.2 4e-16
gi|291299584|ref|YP_003510862.1| MarR family transcriptional reg... 88.2 4e-16
gi|332668805|ref|YP_004451812.1| regulatory protein MarR [Cellul... 87.0 9e-16
gi|300741878|ref|ZP_07071899.1| transcriptional regulator, MarR ... 86.3 1e-15
gi|169629558|ref|YP_001703207.1| MarR family transcriptional reg... 85.5 2e-15
gi|337763036|emb|CCB71744.1| Transcriptional regulator [Streptom... 84.0 7e-15
gi|134099341|ref|YP_001105002.1| MarR family transcriptional reg... 82.8 2e-14
gi|291007273|ref|ZP_06565246.1| MarR family transcriptional regu... 82.4 2e-14
>gi|15610024|ref|NP_217403.1| transcriptional regulatory protein [Mycobacterium tuberculosis
H37Rv]
gi|15842429|ref|NP_337466.1| MarR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|31794063|ref|NP_856556.1| transcriptional regulatory protein [Mycobacterium bovis AF2122/97]
78 more sequence titles
Length=139
Score = 268 bits (686), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%), Gaps = 0/139 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS
Sbjct 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR
Sbjct 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
Query 121 LTAPQQREFKRMLEKLGSD 139
LTAPQQREFKRMLEKLGSD
Sbjct 121 LTAPQQREFKRMLEKLGSD 139
>gi|148824075|ref|YP_001288830.1| transcriptional regulator [Mycobacterium tuberculosis F11]
gi|148722602|gb|ABR07227.1| hypothetical transcriptional regulatory protein [Mycobacterium
tuberculosis F11]
Length=139
Score = 266 bits (680), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 138/139 (99%), Positives = 138/139 (99%), Gaps = 0/139 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
M LADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS
Sbjct 1 MSLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR
Sbjct 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
Query 121 LTAPQQREFKRMLEKLGSD 139
LTAPQQREFKRMLEKLGSD
Sbjct 121 LTAPQQREFKRMLEKLGSD 139
>gi|342858263|ref|ZP_08714918.1| transcriptional regulatory protein [Mycobacterium colombiense
CECT 3035]
gi|342133967|gb|EGT87147.1| transcriptional regulatory protein [Mycobacterium colombiense
CECT 3035]
Length=153
Score = 227 bits (579), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/136 (83%), Positives = 123/136 (91%), Gaps = 0/136 (0%)
Query 4 ADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTP 63
ADDAPLGYLLYRVGAVLRPEV+ AL PLGLTLPEFVCLR+LS PG+SSAEL+RH +VTP
Sbjct 18 ADDAPLGYLLYRVGAVLRPEVATALGPLGLTLPEFVCLRILSIFPGMSSAELSRHTNVTP 77
Query 64 QAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTA 123
QAMNTVLRKLE+ GAVARP+SVSSGR+LPA LT +GRAL KRAE VR ADAR+LA+LT
Sbjct 78 QAMNTVLRKLEEVGAVARPSSVSSGRALPANLTGQGRALLKRAEGAVRGADARILAKLTE 137
Query 124 PQQREFKRMLEKLGSD 139
PQQREFKRMLEKLGSD
Sbjct 138 PQQREFKRMLEKLGSD 153
>gi|296171505|ref|ZP_06852769.1| MarR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894067|gb|EFG73828.1| MarR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=142
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/136 (81%), Positives = 120/136 (89%), Gaps = 0/136 (0%)
Query 4 ADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTP 63
A+DAPLGYLLYRV ++LRPEVSA L PLGLTLPEFVCLRMLS PG+SSAEL+R A VTP
Sbjct 7 AEDAPLGYLLYRVASLLRPEVSAVLGPLGLTLPEFVCLRMLSMFPGMSSAELSRQAGVTP 66
Query 64 QAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTA 123
QAMNTVLRKLED GAVARP SVSSGR+LPATLT +GRAL KRAE VR ADAR+LA+LT
Sbjct 67 QAMNTVLRKLEDIGAVARPTSVSSGRALPATLTGQGRALLKRAEGAVRTADARILAKLTD 126
Query 124 PQQREFKRMLEKLGSD 139
QQR+FKRML+KLGSD
Sbjct 127 TQQRDFKRMLDKLGSD 142
>gi|254819053|ref|ZP_05224054.1| MarR-family protein transcriptional regulator [Mycobacterium
intracellulare ATCC 13950]
Length=141
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/135 (81%), Positives = 118/135 (88%), Gaps = 0/135 (0%)
Query 5 DDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQ 64
DDAPLGYLLYRVG VLRPEV+A LSPL L LPEFVCLR+LS PG+SSAEL+RHA VTPQ
Sbjct 4 DDAPLGYLLYRVGTVLRPEVAAVLSPLDLALPEFVCLRILSMYPGMSSAELSRHAGVTPQ 63
Query 65 AMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAP 124
AMNTVLRKLED GAV RP+SVSSGR+LPA LT GRAL KRAEA VR ADAR+L++LT
Sbjct 64 AMNTVLRKLEDVGAVERPSSVSSGRALPANLTGAGRALLKRAEAAVRGADARILSKLTET 123
Query 125 QQREFKRMLEKLGSD 139
QQREFKRMLEKLGSD
Sbjct 124 QQREFKRMLEKLGSD 138
>gi|183981835|ref|YP_001850126.1| transcriptional regulatory protein [Mycobacterium marinum M]
gi|183175161|gb|ACC40271.1| transcriptional regulatory protein [Mycobacterium marinum M]
Length=139
Score = 217 bits (552), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/139 (80%), Positives = 123/139 (89%), Gaps = 0/139 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
MG A++APLG+LLYR AVLRPEVS ALSPLGLTLPEFVCLR+LS SPGLSSAELARH +
Sbjct 1 MGQAEEAPLGFLLYRAAAVLRPEVSTALSPLGLTLPEFVCLRILSASPGLSSAELARHTN 60
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VTPQAMNTVLRKLE+ GAV+RPASV SGR+LPATLTA GRAL KRAE VVR AD R+LA+
Sbjct 61 VTPQAMNTVLRKLEEVGAVSRPASVPSGRALPATLTAPGRALLKRAEVVVRGADDRILAK 120
Query 121 LTAPQQREFKRMLEKLGSD 139
LT +QREFKRMLE LG++
Sbjct 121 LTPAEQREFKRMLEMLGTE 139
>gi|254776169|ref|ZP_05217685.1| MarR-family protein transcriptional regulator [Mycobacterium
avium subsp. avium ATCC 25291]
gi|336459059|gb|EGO38009.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis
S397]
Length=140
Score = 216 bits (551), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/139 (80%), Positives = 120/139 (87%), Gaps = 0/139 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
M ADDAPLGYLLYRVGA LRPEVS AL PLGLTLPEFVCLR+LS PG+SSAEL+R A
Sbjct 1 MTEADDAPLGYLLYRVGAALRPEVSGALGPLGLTLPEFVCLRILSMFPGMSSAELSRRAG 60
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VTPQAMNTVLR+L++ GAVARP+SVSSGRSLPA LT GR L KRAEA VR ADAR+LA+
Sbjct 61 VTPQAMNTVLRRLQEVGAVARPSSVSSGRSLPAHLTGAGRTLLKRAEAAVRGADARILAK 120
Query 121 LTAPQQREFKRMLEKLGSD 139
LT QQREFKRML+KLGSD
Sbjct 121 LTETQQREFKRMLQKLGSD 139
>gi|118463730|ref|YP_882914.1| MarR family transcriptional regulator [Mycobacterium avium 104]
gi|118165017|gb|ABK65914.1| MarR-family protein transcriptional regulator [Mycobacterium
avium 104]
Length=175
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/139 (80%), Positives = 120/139 (87%), Gaps = 0/139 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
M ADDAPLGYLLYRVGA LRPEVS AL PLGLTLPEFVCLR+LS PG+SSAEL+R A
Sbjct 36 MTEADDAPLGYLLYRVGAALRPEVSGALGPLGLTLPEFVCLRILSMFPGMSSAELSRRAG 95
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VTPQAMNTVLR+L++ GAVARP+SVSSGRSLPA LT GR L KRAEA VR ADAR+LA+
Sbjct 96 VTPQAMNTVLRRLQEVGAVARPSSVSSGRSLPAHLTGAGRTLLKRAEAAVRGADARILAK 155
Query 121 LTAPQQREFKRMLEKLGSD 139
LT QQREFKRML+KLGSD
Sbjct 156 LTETQQREFKRMLQKLGSD 174
>gi|118617640|ref|YP_905972.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
gi|118569750|gb|ABL04501.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
Length=142
Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/139 (79%), Positives = 122/139 (88%), Gaps = 0/139 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
MG A++APLG+LLYR AVLRPEVS ALSPLGLTLPEFVCLR+LS SPGLSSAELARH +
Sbjct 4 MGQAEEAPLGFLLYRAAAVLRPEVSTALSPLGLTLPEFVCLRILSASPGLSSAELARHTN 63
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VT QAMNTVLRKLE+ GAV+RPASV SGR+LPATLTA GRAL KRAE VVR AD R+LA+
Sbjct 64 VTSQAMNTVLRKLEEVGAVSRPASVPSGRALPATLTAPGRALLKRAEVVVRGADDRILAK 123
Query 121 LTAPQQREFKRMLEKLGSD 139
LT +QREFKRMLE LG++
Sbjct 124 LTPAEQREFKRMLEMLGTE 142
>gi|41409051|ref|NP_961887.1| hypothetical protein MAP2953 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397410|gb|AAS05270.1| hypothetical protein MAP_2953 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=140
Score = 213 bits (542), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 109/139 (79%), Positives = 119/139 (86%), Gaps = 0/139 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
M ADDAPLGYLLYRVGA LRPEVS AL PLGLTLPEFVCLR+LS PG+SSAEL+R A
Sbjct 1 MTEADDAPLGYLLYRVGAALRPEVSGALGPLGLTLPEFVCLRILSMFPGMSSAELSRRAG 60
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VTPQAMNTVLR+L++ GAVARP+SVSSGRSLPA LT G L KRAEA VR ADAR+LA+
Sbjct 61 VTPQAMNTVLRRLQEVGAVARPSSVSSGRSLPAHLTGAGCTLLKRAEAAVRGADARILAK 120
Query 121 LTAPQQREFKRMLEKLGSD 139
LT QQREFKRML+KLGSD
Sbjct 121 LTETQQREFKRMLQKLGSD 139
>gi|333991248|ref|YP_004523862.1| transcriptional regulator [Mycobacterium sp. JDM601]
gi|333487216|gb|AEF36608.1| transcriptional regulatory protein [Mycobacterium sp. JDM601]
Length=139
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/139 (67%), Positives = 113/139 (82%), Gaps = 0/139 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
MG ++APLGYLLYRV + LRP+VSA L PLGLTLPEFVC+R+LS PGLSSAELARH S
Sbjct 1 MGDVNEAPLGYLLYRVSSALRPQVSAVLGPLGLTLPEFVCMRVLSVRPGLSSAELARHTS 60
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VTPQAMNTVL +L++ GAV+RP SV SGR+LPATLT GR L RAE VR AD RVLA
Sbjct 61 VTPQAMNTVLHRLQNRGAVSRPQSVPSGRALPATLTDAGRELLTRAEDAVRVADGRVLAA 120
Query 121 LTAPQQREFKRMLEKLGSD 139
L+ +Q+ F++MLE++G++
Sbjct 121 LSPTEQQRFRQMLERIGAE 139
>gi|289751551|ref|ZP_06510929.1| transcriptional regulator [Mycobacterium tuberculosis T92]
gi|289692138|gb|EFD59567.1| transcriptional regulator [Mycobacterium tuberculosis T92]
Length=88
Score = 174 bits (440), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS
Sbjct 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSG 88
VTPQAMNTVLRKLEDAGAVARPASVSSG
Sbjct 61 VTPQAMNTVLRKLEDAGAVARPASVSSG 88
>gi|169627430|ref|YP_001701079.1| MarR family transcriptional regulator [Mycobacterium abscessus
ATCC 19977]
gi|169239397|emb|CAM60425.1| Putative transcriptional regulator, MarR family [Mycobacterium
abscessus]
Length=145
Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/129 (55%), Positives = 97/129 (76%), Gaps = 0/129 (0%)
Query 8 PLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMN 67
PLGYL++R GAV+RP V A L PLGL +PEF+CLRML+++PG +SAELAR +V+ QAMN
Sbjct 9 PLGYLMFRAGAVMRPRVLAVLRPLGLGMPEFMCLRMLNENPGRTSAELARENNVSAQAMN 68
Query 68 TVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQR 127
VL L++ V+RPA +SGR+LPA +TA+G+AL KR E+ + AA+ + +RL QR
Sbjct 69 QVLNGLQNISLVSRPAVPASGRALPAKVTAKGKALLKRVESAIWAAEDEMFSRLGVDDQR 128
Query 128 EFKRMLEKL 136
E +R+L +L
Sbjct 129 ELRRILGRL 137
>gi|118467907|ref|YP_886875.1| MarR family transcriptional regulator [Mycobacterium smegmatis
str. MC2 155]
gi|118169194|gb|ABK70090.1| MarR-family protein transcriptional regulator [Mycobacterium
smegmatis str. MC2 155]
Length=142
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 94/126 (75%), Gaps = 0/126 (0%)
Query 8 PLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMN 67
PLG+L+YRV AVL+P V+A L LGLTLPEFVCLR+LS P S+AELARH +V+PQAMN
Sbjct 12 PLGFLMYRVMAVLQPAVAAQLQQLGLTLPEFVCLRILSAQPRQSNAELARHINVSPQAMN 71
Query 68 TVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQR 127
V+R L++ GAV RP + SSGR+LPA LT G L KRAEA AA+ LA LT Q+R
Sbjct 72 NVVRALQEKGAVRRPEAASSGRALPAELTTEGAKLLKRAEAAALAAEEEALANLTEAQRR 131
Query 128 EFKRML 133
E KR+L
Sbjct 132 ELKRLL 137
>gi|296394013|ref|YP_003658897.1| MarR family transcriptional regulator [Segniliparus rotundus
DSM 44985]
gi|296181160|gb|ADG98066.1| transcriptional regulator, MarR family [Segniliparus rotundus
DSM 44985]
Length=158
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/128 (54%), Positives = 89/128 (70%), Gaps = 0/128 (0%)
Query 6 DAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQA 65
D+P+GY L R R V A L PLGLTLP+++C+ ML ++PG+S+AELAR A VT QA
Sbjct 15 DSPIGYFLKRAMLTTRAHVGAKLRPLGLTLPQYICMHMLHRNPGMSNAELAREAFVTRQA 74
Query 66 MNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQ 125
MN+VL +LE G VARPA+ ++GR LPATLT RG L +A V AA+ VLA L+ +
Sbjct 75 MNSVLHELEKMGVVARPATAAAGRVLPATLTDRGEELLAQALPHVWAAEDEVLAALSTTE 134
Query 126 QREFKRML 133
+ E KR+L
Sbjct 135 RNELKRLL 142
>gi|169627188|ref|YP_001700837.1| MarR family transcriptional regulator [Mycobacterium abscessus
ATCC 19977]
gi|169239155|emb|CAM60183.1| Putative transcriptional regulator, MarR family [Mycobacterium
abscessus]
Length=144
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/133 (50%), Positives = 98/133 (74%), Gaps = 1/133 (0%)
Query 8 PLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMN 67
PLG L+YRV A LR E++AAL+ L L P++VC+R+LS++PG S+A+LAR VTPQ+MN
Sbjct 8 PLGALMYRVSAALRSEITAALASLNLPFPQYVCMRVLSKNPGWSNADLARAIDVTPQSMN 67
Query 68 TVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQR 127
TVL+ L+DAG V+RP +V +GR+ PA L+ G AL K+A+ + R A+ R+L+ ++A Q+
Sbjct 68 TVLQALQDAGLVSRPDTVDTGRARPAQLSRSGTALLKQADVLAREAEERLLSGISARQRS 127
Query 128 EFKRMLEKL-GSD 139
+F + L + G D
Sbjct 128 DFFQTLRDIAGED 140
>gi|169628076|ref|YP_001701725.1| putative HTH-type transcriptional regulator MarR [Mycobacterium
abscessus ATCC 19977]
gi|169240043|emb|CAM61071.1| Putative HTH-type transcriptional regulator MarR [Mycobacterium
abscessus]
Length=142
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/135 (50%), Positives = 89/135 (66%), Gaps = 0/135 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
M + A LGYLL R LR +V+A L P+GL+LPE++C+R+L PG+S++ELAR A
Sbjct 1 MEIDGTASLGYLLTRTATSLRGKVAARLEPIGLSLPEYICMRILRTYPGMSNSELARQAM 60
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VT QAMN VL +LE+ G ++RP S GRSLPA LT RG ++A V A + V+ +
Sbjct 61 VTRQAMNAVLHRLEEEGLISRPESADHGRSLPARLTRRGSTQLEKAVEAVTAGENEVMEK 120
Query 121 LTAPQQREFKRMLEK 135
LTA +QR K ML K
Sbjct 121 LTADEQRALKAMLAK 135
>gi|317507298|ref|ZP_07965040.1| MarR family protein [Segniliparus rugosus ATCC BAA-974]
gi|316254401|gb|EFV13729.1| MarR family protein [Segniliparus rugosus ATCC BAA-974]
Length=149
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/133 (49%), Positives = 83/133 (63%), Gaps = 0/133 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
M + P GY L R R A L PLGLT+P+++C+++L +PG+S+A+LAR +
Sbjct 1 MTQPSELPFGYFLTRAMLTTRARTGAKLRPLGLTMPQYICMQILRHNPGMSNAQLARESF 60
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VT QAMN VL LE A VARPA+ SGR LPA LT RG AL A V AA+ VLA
Sbjct 61 VTRQAMNAVLHDLEKAELVARPATAVSGRILPARLTERGEALLDEALPQVWAAEDEVLAA 120
Query 121 LTAPQQREFKRML 133
LT ++ E KR+L
Sbjct 121 LTQEERHELKRLL 133
>gi|302518183|ref|ZP_07270525.1| marR-family transcriptional regulator [Streptomyces sp. SPB78]
gi|318059989|ref|ZP_07978712.1| MarR family transcriptional regulator [Streptomyces sp. SA3_actG]
gi|318079728|ref|ZP_07987060.1| MarR family transcriptional regulator [Streptomyces sp. SA3_actF]
gi|333028138|ref|ZP_08456202.1| putative MarR family transcriptional regulator [Streptomyces
sp. Tu6071]
gi|302427078|gb|EFK98893.1| marR-family transcriptional regulator [Streptomyces sp. SPB78]
gi|332747990|gb|EGJ78431.1| putative MarR family transcriptional regulator [Streptomyces
sp. Tu6071]
Length=152
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/135 (45%), Positives = 83/135 (62%), Gaps = 0/135 (0%)
Query 2 GLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASV 61
G+ D LGYLL + LR + A L PLG+T+ + CL +L+Q PGLS++ELAR A V
Sbjct 7 GIDLDKSLGYLLKEASSALRTAMEAVLRPLGMTVTHYSCLELLAQRPGLSNSELARGAFV 66
Query 62 TPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARL 121
T Q+MN +L+ LE G V RPA G++LPA LT RGR + A A VR+ + R+L +
Sbjct 67 TRQSMNVLLQNLEREGYVTRPAQAPHGKALPARLTPRGRQSLEEATAAVRSVEVRMLGGM 126
Query 122 TAPQQREFKRMLEKL 136
T +Q + R L +
Sbjct 127 TEAEQADAFRALTSM 141
>gi|326331646|ref|ZP_08197934.1| transcriptional regulator, MarR family [Nocardioidaceae bacterium
Broad-1]
gi|325950445|gb|EGD42497.1| transcriptional regulator, MarR family [Nocardioidaceae bacterium
Broad-1]
Length=150
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/135 (45%), Positives = 82/135 (61%), Gaps = 0/135 (0%)
Query 2 GLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASV 61
G+ D LGYLL + LR + L PLG+++ + CL +L+Q PGLS++ELAR A V
Sbjct 5 GVDLDKSLGYLLKEASSALRAAMEEVLRPLGMSITHYACLELLAQRPGLSNSELARGAFV 64
Query 62 TPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARL 121
T Q MN +LR LE G V RPA G+ LP LT RGR ++A A VR+ + R+LA +
Sbjct 65 TRQTMNVLLRSLEKEGDVTRPAEAPVGKVLPTRLTPRGRQRLEKATAAVRSVEVRMLAGM 124
Query 122 TAPQQREFKRMLEKL 136
T Q E R+L+ +
Sbjct 125 TPADQAEAFRILQGM 139
>gi|342858504|ref|ZP_08715159.1| MarR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
gi|342134208|gb|EGT87388.1| MarR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
Length=150
Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/135 (43%), Positives = 86/135 (64%), Gaps = 0/135 (0%)
Query 2 GLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASV 61
G+ D LGYLL + LR + L PLG+++ + CL +L+Q PGLS++ELAR A V
Sbjct 5 GVDLDTSLGYLLKEASSALRAAMEEVLRPLGMSVTHYSCLELLAQRPGLSNSELARGAFV 64
Query 62 TPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARL 121
T Q+MN +L+ LE G V+RPA G++LP LT RGR ++A A VR+ + R+L+ +
Sbjct 65 TRQSMNVLLQTLERDGYVSRPAQAPVGKALPTRLTPRGRRSLEKATAAVRSVEVRMLSGM 124
Query 122 TAPQQREFKRMLEKL 136
T +Q E R+L+ +
Sbjct 125 TEAEQSEAFRLLQSM 139
>gi|302529913|ref|ZP_07282255.1| MarR family transcriptional regulator [Streptomyces sp. AA4]
gi|302438808|gb|EFL10624.1| MarR family transcriptional regulator [Streptomyces sp. AA4]
Length=149
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/135 (45%), Positives = 84/135 (63%), Gaps = 0/135 (0%)
Query 2 GLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASV 61
G+ D LGYLL + LR + L PLG+T+ + CL +L+Q PGLS++ELAR A V
Sbjct 7 GIDLDKSLGYLLKEASSALRAAMEEVLRPLGMTVTHYSCLELLAQRPGLSNSELARGAFV 66
Query 62 TPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARL 121
T Q+MN +L+ LE G V RPA G++LP LT RGR ++A A VRA + R+L+ L
Sbjct 67 TRQSMNVLLQALERDGYVTRPAEAPVGKALPTRLTPRGRRSLEKASAAVRAVEVRMLSGL 126
Query 122 TAPQQREFKRMLEKL 136
T +Q + R+L +
Sbjct 127 TETEQADALRILRSM 141
>gi|169629012|ref|YP_001702661.1| MarR family transcriptional regulator [Mycobacterium abscessus
ATCC 19977]
gi|169240979|emb|CAM62007.1| Putative transcriptional regulator, MarR family [Mycobacterium
abscessus]
Length=149
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/133 (43%), Positives = 83/133 (63%), Gaps = 0/133 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
+G+ + LGYLL + LR + L PLG+++ + CL +L+Q PGLS++ELAR A
Sbjct 6 VGVDLETSLGYLLKETSSALRTAMEEVLRPLGMSITHYSCLELLAQRPGLSNSELARGAF 65
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VT Q MN +L+ LE G V RPA G+ LP LT+RGR ++A A VR+ + R+LA
Sbjct 66 VTRQTMNVLLQNLERDGYVTRPAEAPVGKVLPVRLTSRGRRSLQKASAAVRSVELRMLAG 125
Query 121 LTAPQQREFKRML 133
+T +Q + R+L
Sbjct 126 MTTTEQSDAFRLL 138
>gi|329936505|ref|ZP_08286241.1| MarR family transcriptional regulator [Streptomyces griseoaurantiacus
M045]
gi|329304020|gb|EGG47902.1| MarR family transcriptional regulator [Streptomyces griseoaurantiacus
M045]
Length=152
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/135 (45%), Positives = 84/135 (63%), Gaps = 0/135 (0%)
Query 2 GLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASV 61
G+ D LGYLL + LR + L PLG+ + + CL +L+Q PGLS++ELAR A V
Sbjct 7 GIDLDTSLGYLLKEAASALRTAMEEVLRPLGMNVTHYSCLELLAQRPGLSNSELARGAFV 66
Query 62 TPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARL 121
T Q+MNT+L+ LE G V RPA+ G++LPA LT RGR + A A VR+ + R+L+ L
Sbjct 67 TRQSMNTLLQALERDGFVTRPAAPPVGKALPARLTPRGRQSLEAASAAVRSVEERMLSGL 126
Query 122 TAPQQREFKRMLEKL 136
T + E R+L +
Sbjct 127 TGEDRSEAFRILRSM 141
>gi|21225956|ref|NP_631735.1| MarR family transcriptional regulator [Streptomyces coelicolor
A3(2)]
gi|289766880|ref|ZP_06526258.1| MarR family transcriptional regulator [Streptomyces lividans
TK24]
gi|11493188|emb|CAC17527.1| putative marR-family transcriptional regulator [Streptomyces
coelicolor A3(2)]
gi|289697079|gb|EFD64508.1| MarR family transcriptional regulator [Streptomyces lividans
TK24]
Length=151
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/135 (43%), Positives = 84/135 (63%), Gaps = 0/135 (0%)
Query 2 GLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASV 61
G+ D LGYLL + LR + L PLG+++ + CL +L+Q PGLS++ELAR A V
Sbjct 7 GIDLDKSLGYLLKEASSALRAAMEEVLRPLGMSVTHYSCLELLAQRPGLSNSELARGAFV 66
Query 62 TPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARL 121
T Q+MN +L+ LE G V RPA G++LPA LT RGR ++A VR+ + R+LA +
Sbjct 67 TRQSMNVLLQALERDGYVTRPAEAPVGKALPARLTPRGRRSLEKATVAVRSVELRMLAGM 126
Query 122 TAPQQREFKRMLEKL 136
T +Q R+L+ +
Sbjct 127 TESEQSGAFRILQSM 141
>gi|271965566|ref|YP_003339762.1| MarR family transcriptional regulator [Streptosporangium roseum
DSM 43021]
gi|270508741|gb|ACZ87019.1| transcriptional regulator, MarR family [Streptosporangium roseum
DSM 43021]
Length=152
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/136 (43%), Positives = 84/136 (62%), Gaps = 0/136 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
+G+ D LGYLL + LR + L PLG+++ + CL +L+Q PGLS++ELAR A
Sbjct 6 VGVDLDKSLGYLLKEASSALRAAMEEVLRPLGMSVTHYSCLELLAQRPGLSNSELARGAF 65
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VT Q+MN +L+ LE G V RPA G+ LPA LT RGR ++A VR+ + R+LA
Sbjct 66 VTRQSMNVLLQALEREGYVTRPAEAPVGKVLPARLTPRGRRSLEKATVAVRSVEVRMLAG 125
Query 121 LTAPQQREFKRMLEKL 136
+T +Q R+L+ +
Sbjct 126 MTEAEQSGAFRILQSM 141
>gi|258653042|ref|YP_003202198.1| MarR family transcriptional regulator [Nakamurella multipartita
DSM 44233]
gi|258556267|gb|ACV79209.1| transcriptional regulator, MarR family [Nakamurella multipartita
DSM 44233]
Length=152
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/136 (42%), Positives = 83/136 (62%), Gaps = 0/136 (0%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
+G+ LGYLL + LR + L PLG+++ + CL +L+Q PGLS +ELAR A
Sbjct 6 VGIDLQTSLGYLLKEASSALRVAMEQVLRPLGMSVTHYSCLELLAQRPGLSGSELARGAF 65
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VT Q+MN +L+ LE G++ RPA+ G+ LP LT +GR +A A VR+ + R+L
Sbjct 66 VTRQSMNVLLQALEREGSITRPAAAPVGKVLPTQLTPQGRRNLAKATAAVRSVEVRMLEG 125
Query 121 LTAPQQREFKRMLEKL 136
LT+ +Q + RML +
Sbjct 126 LTSAEQADMSRMLRSM 141
>gi|323357223|ref|YP_004223619.1| transcriptional regulator [Microbacterium testaceum StLB037]
gi|323273594|dbj|BAJ73739.1| transcriptional regulator [Microbacterium testaceum StLB037]
Length=145
Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/137 (44%), Positives = 83/137 (61%), Gaps = 4/137 (2%)
Query 6 DAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQA 65
D LGYLL + LR + L PLG+T+ + CL +LSQ PGLS+++LAR A VT Q+
Sbjct 9 DTSLGYLLKEAASALRAAMEDVLRPLGMTITHYSCLELLSQRPGLSNSDLARGAFVTRQS 68
Query 66 MNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQ 125
MN +L+ LE G V RP + G++LPA LTA+GR + A A VR+ + R+L +T +
Sbjct 69 MNVLLQSLERDGIVTRPDAAPVGKALPARLTAKGRRSLEEASAAVRSVERRMLGGMTEAE 128
Query 126 Q----REFKRMLEKLGS 138
Q R + M+ L S
Sbjct 129 QTAALRALRSMVRSLTS 145
>gi|312195993|ref|YP_004016054.1| MarR family transcriptional regulator [Frankia sp. EuI1c]
gi|311227329|gb|ADP80184.1| regulatory protein MarR [Frankia sp. EuI1c]
Length=153
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/132 (44%), Positives = 77/132 (59%), Gaps = 0/132 (0%)
Query 2 GLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASV 61
G+ D LGY+L + L + A L PLG+T+ + CL +L+Q PGLS++ELAR V
Sbjct 7 GIELDTSLGYMLKAAASALHSAMEAVLRPLGMTITHYACLELLAQRPGLSNSELARGTFV 66
Query 62 TPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARL 121
T Q+MN +L+ LE G V RP GR LP LT RGR K A A VR + +LA L
Sbjct 67 TRQSMNVLLQALERQGLVVRPEQAPVGRVLPTELTDRGRRQLKVASAAVRRVEQDMLANL 126
Query 122 TAPQQREFKRML 133
+Q + +R+L
Sbjct 127 DTGEQAQMRRLL 138
>gi|148271870|ref|YP_001221431.1| MarR family transcriptional regulator [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829800|emb|CAN00719.1| putative transcriptional regulator, MarR family [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length=150
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/128 (45%), Positives = 77/128 (61%), Gaps = 0/128 (0%)
Query 9 LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNT 68
LGYLL + LR + AL PLG+T+ + CL +L+Q PG S+++LAR A VT Q+MN
Sbjct 14 LGYLLKEAASALRAAMEEALRPLGMTITHYSCLELLAQRPGSSNSDLARGAFVTRQSMNV 73
Query 69 VLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQRE 128
+L+ LE G V RPA + GR P LTA GR +A A VRA + R+LA L+ Q
Sbjct 74 LLQTLERDGIVTRPAGEAVGRVQPTRLTAAGRRQLAKASAAVRAVELRMLADLSDADQEA 133
Query 129 FKRMLEKL 136
R+L +
Sbjct 134 ATRILRGM 141
>gi|170782494|ref|YP_001710827.1| MarR family transcriptional regulator [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157063|emb|CAQ02236.1| putative MarR-family transcriptional regulator [Clavibacter michiganensis
subsp. sepedonicus]
Length=150
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 77/125 (62%), Gaps = 0/125 (0%)
Query 9 LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNT 68
LGYLL + LR + AL PLG+T+ + CL +L+Q PG S+++LAR A VT Q+MN
Sbjct 14 LGYLLKEAASALRQAMEEALRPLGMTITHYSCLELLAQRPGSSNSDLARGAFVTRQSMNV 73
Query 69 VLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQRE 128
+L+ LE G+V RPA + GR P LTA+GR +A A VRA + R+L L+ +
Sbjct 74 LLQTLERDGSVTRPAEEAVGRVQPTRLTAKGRRDLAKASAAVRAVELRMLGDLSDADREA 133
Query 129 FKRML 133
R+L
Sbjct 134 ATRIL 138
>gi|254387418|ref|ZP_05002660.1| marR-family transcriptional regulator [Streptomyces sp. Mg1]
gi|194346205|gb|EDX27171.1| marR-family transcriptional regulator [Streptomyces sp. Mg1]
Length=160
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/145 (41%), Positives = 85/145 (59%), Gaps = 6/145 (4%)
Query 1 MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHAS 60
+G+ + LGYLL + LR + A L PLG+++ + CL +L+Q PGLS++ELAR A
Sbjct 6 VGVDLETSLGYLLKEASSALRAAMEAVLRPLGMSVTHYSCLELLAQRPGLSNSELARGAF 65
Query 61 VTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLAR 120
VT Q MN +L+ LE G V RPA G++LP LT GR + A VR+ + R+LA
Sbjct 66 VTRQTMNVLLQNLEREGYVTRPAEAPVGKALPTRLTPSGRRSLEEATVAVRSVELRMLAG 125
Query 121 LTAPQQ----REFKRMLEKL--GSD 139
+T ++ R + M+ L GSD
Sbjct 126 MTETERSAALRILRSMVHSLRDGSD 150
>gi|345008867|ref|YP_004811221.1| regulatory protein MarR [Streptomyces violaceusniger Tu 4113]
gi|344035216|gb|AEM80941.1| regulatory protein MarR [Streptomyces violaceusniger Tu 4113]
Length=147
Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/135 (44%), Positives = 79/135 (59%), Gaps = 8/135 (5%)
Query 9 LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNT 68
+GY L R A LR + AL GLT+P++ CL +L Q PGLS+AELAR VT Q+MN
Sbjct 14 VGYRLKRAAAALRGAMDKALRERGLTVPQYACLELLDQRPGLSNAELARGTFVTRQSMNV 73
Query 69 VLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQR- 127
VLR L+DA ++RPA+ GR+LPA LT GR A + V A + ++ PQ+R
Sbjct 74 VLRGLQDADLISRPATTDHGRALPAHLTEAGRERLDAARSAVYAIERTMVEAF--PQRRL 131
Query 128 -----EFKRMLEKLG 137
+ RM + LG
Sbjct 132 AALLADLDRMAKALG 146
>gi|329946953|ref|ZP_08294365.1| transcriptional regulator, MarR family [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328526764|gb|EGF53777.1| transcriptional regulator, MarR family [Actinomyces sp. oral
taxon 170 str. F0386]
Length=143
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/134 (44%), Positives = 81/134 (61%), Gaps = 3/134 (2%)
Query 3 LADDAP---LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHA 59
++ D P LGY L R+ A LR + AL PLGL+ P+++CL +LS++PG S++ELAR A
Sbjct 1 MSQDDPRKFLGYQLKRIQATLRARMDEALRPLGLSAPQYLCLELLSRAPGASTSELAREA 60
Query 60 SVTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLA 119
VT Q M+T+LR L D G R A SGR+LP LT GR+L K A V + +++
Sbjct 61 FVTRQTMSTLLRTLVDRGLAQRAAQAPSGRALPLQLTPEGRSLLKEASRVTVEIERVMIS 120
Query 120 RLTAPQQREFKRML 133
L+ Q R + L
Sbjct 121 PLSESQLRAVQEAL 134
>gi|296131385|ref|YP_003638635.1| MarR family transcriptional regulator [Cellulomonas flavigena
DSM 20109]
gi|296023200|gb|ADG76436.1| transcriptional regulator, MarR family [Cellulomonas flavigena
DSM 20109]
Length=151
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/128 (43%), Positives = 75/128 (59%), Gaps = 0/128 (0%)
Query 9 LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNT 68
+GY L V + LR + L PLG+ + + CL +L+Q PG+S AELAR A VT Q+M+T
Sbjct 13 MGYALKEVSSALRTAMEDVLRPLGMNVTRYACLELLAQRPGMSGAELARGAFVTRQSMST 72
Query 69 VLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQRE 128
+L+ LED G V RP G+ LP TLT GR A VR+ + +LA LT Q++
Sbjct 73 LLQALEDEGYVTRPTEAPVGKVLPTTLTPEGRRRLGEATVAVRSVEVAMLAGLTPAAQQD 132
Query 129 FKRMLEKL 136
R L+ +
Sbjct 133 TFRALQTM 140
>gi|340359030|ref|ZP_08681530.1| MarR family transcriptional regulator [Actinomyces sp. oral taxon
448 str. F0400]
gi|339885500|gb|EGQ75219.1| MarR family transcriptional regulator [Actinomyces sp. oral taxon
448 str. F0400]
Length=145
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/119 (46%), Positives = 74/119 (63%), Gaps = 0/119 (0%)
Query 7 APLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAM 66
A +GY L R LR + L PLGLT P++ CL ++ + PG SSAELAR A VT Q M
Sbjct 9 ALIGYRLKRAQISLRSRMDEGLRPLGLTSPQYACLELIQRRPGASSAELARAAFVTRQTM 68
Query 67 NTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQ 125
+T+L+ L G V R +GR++P LTA G L +RA AVVR ++R+++RL+ Q
Sbjct 69 STLLKGLVARGLVERSERACAGRAMPTGLTAEGGDLLRRASAVVREVESRMISRLSDTQ 127
>gi|345003159|ref|YP_004806013.1| MarR family transcriptional regulator [Streptomyces sp. SirexAA-E]
gi|344318785|gb|AEN13473.1| transcriptional regulator, MarR family [Streptomyces sp. SirexAA-E]
Length=153
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/135 (44%), Positives = 79/135 (59%), Gaps = 8/135 (5%)
Query 9 LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNT 68
+GY L R A LR + L GLT+P++ CL +L+ PGLS+AELAR A VT Q+MN
Sbjct 20 VGYRLKRAHAALRGALDQVLREHGLTVPQYSCLELLALRPGLSNAELARGAFVTRQSMNV 79
Query 69 VLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQR- 127
VLR L+D G +ARPA+ GR+ PA LT G+ A + V A + R++A P R
Sbjct 80 VLRGLQDDGLIARPATADHGRARPAHLTPEGQRRLDAARSAVYAVETRMIA--AVPSARL 137
Query 128 -----EFKRMLEKLG 137
+ +RM E LG
Sbjct 138 PALLADLERMAEALG 152
>gi|260906874|ref|ZP_05915196.1| MarR family transcriptional regulator [Brevibacterium linens
BL2]
Length=162
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/107 (47%), Positives = 71/107 (67%), Gaps = 1/107 (0%)
Query 6 DAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQA 65
+A +GY L + +VLR + L PLGL+ P++ CL +L ++PG S++ELAR A VT Q
Sbjct 17 EAMIGYQLKHLQSVLRSRMDETLRPLGLSTPQYACLELLRRAPGASNSELARGAFVTRQT 76
Query 66 MNTVLRKLEDAGAVARPASVSSGRSLPATLTAR-GRALAKRAEAVVR 111
MNT+L+ L+D G V R +GR+LP TLT + G+ALA+ E V R
Sbjct 77 MNTLLKGLQDRGLVTRATKAETGRALPTTLTEKGGKALAQAVERVER 123
>gi|269793678|ref|YP_003313133.1| transcriptional regulator [Sanguibacter keddieii DSM 10542]
gi|269095863|gb|ACZ20299.1| transcriptional regulator [Sanguibacter keddieii DSM 10542]
Length=150
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/132 (40%), Positives = 76/132 (58%), Gaps = 0/132 (0%)
Query 2 GLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASV 61
G+ + +GYLL + LR + A L PLG+T+ + CL +L+Q PGLS++ELAR V
Sbjct 7 GIHLETSVGYLLKEASSALRAAMEAVLRPLGMTITHYSCLELLAQRPGLSNSELARGTFV 66
Query 62 TPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARL 121
T Q+MN +L+ LE G V R ++GR+LP LT GR A A VR + R+ + +
Sbjct 67 TRQSMNVLLQTLERDGLVTRAEQAATGRALPTELTDAGRRQLATASAAVRGVEDRMKSGM 126
Query 122 TAPQQREFKRML 133
+Q F +L
Sbjct 127 DRAEQAAFADLL 138
>gi|320533972|ref|ZP_08034532.1| transcriptional regulator, MarR family [Actinomyces sp. oral
taxon 171 str. F0337]
gi|320133802|gb|EFW26190.1| transcriptional regulator, MarR family [Actinomyces sp. oral
taxon 171 str. F0337]
Length=143
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/134 (43%), Positives = 79/134 (59%), Gaps = 3/134 (2%)
Query 3 LADDAP---LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHA 59
++ D P LGY L V A LR + AL PLGL+ P+++CL +LS++PG S+++LAR A
Sbjct 1 MSQDDPRELLGYQLKHVQAALRARMDEALRPLGLSAPQYLCLELLSRAPGASTSDLAREA 60
Query 60 SVTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLA 119
VT Q M+T+LR L D G R A SSGR+LP LT GR L A V + +++
Sbjct 61 FVTRQTMSTLLRTLVDRGLAQRAAQASSGRALPVQLTPEGRDLLGEASRVTVEVERVMIS 120
Query 120 RLTAPQQREFKRML 133
L+ Q R + L
Sbjct 121 PLSESQLRVVQEAL 134
>gi|311111769|ref|YP_003982991.1| MarR family transcriptional regulator [Rothia dentocariosa ATCC
17931]
gi|310943263|gb|ADP39557.1| MarR family transcriptional regulator [Rothia dentocariosa ATCC
17931]
Length=148
Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/125 (38%), Positives = 74/125 (60%), Gaps = 0/125 (0%)
Query 9 LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNT 68
+GY L V ++LR + L PLG+T+ ++VCL +L +PG S+AELAR A VT Q MNT
Sbjct 10 IGYRLKEVQSLLRSRMEEVLRPLGITVAQYVCLEILKSTPGASNAELARQAFVTRQTMNT 69
Query 69 VLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQRE 128
+LR L++ + R GR+LP LTA G + +A +R + ++ L+ +++E
Sbjct 70 LLRGLQERSLIERAEQAPRGRALPTILTAEGERVLDQATGRIRDVEQHMVGGLSDAKRQE 129
Query 129 FKRML 133
+L
Sbjct 130 LWDLL 134
>gi|336319714|ref|YP_004599682.1| regulatory protein MarR [Cellvibrio gilvus ATCC 13127]
gi|336103295|gb|AEI11114.1| regulatory protein MarR [Cellvibrio gilvus ATCC 13127]
Length=149
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/135 (40%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Query 2 GLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASV 61
G+ + LGYLL + LR + L PLG+T+ + CL +L+Q PGLS AELAR V
Sbjct 6 GIDLETSLGYLLKETSSALRAAMEEVLRPLGMTVTRYSCLELLAQRPGLSGAELARGVFV 65
Query 62 TPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARL 121
T Q+MN +L+ LE+ G V R A ++G+ LP LT RGR ++A VR+ + R+L+ +
Sbjct 66 TRQSMNVLLQALENEGYVTR-AEPTAGKVLPTRLTPRGRRELEQATRAVRSVEDRMLSGM 124
Query 122 TAPQQREFKRMLEKL 136
+ + R+L+ +
Sbjct 125 SEADRAHAFRLLQAM 139
>gi|256393280|ref|YP_003114844.1| MarR family transcriptional regulator [Catenulispora acidiphila
DSM 44928]
gi|256359506|gb|ACU73003.1| transcriptional regulator, MarR family [Catenulispora acidiphila
DSM 44928]
Length=149
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/120 (43%), Positives = 71/120 (60%), Gaps = 0/120 (0%)
Query 10 GYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNTV 69
G+L+ + AVL E++ AL+ G T+ ++ L L Q GLS+AELAR A +TPQ+MN
Sbjct 15 GFLIKQAQAVLHAEMTRALASHGATISQYAVLAALDQESGLSNAELARRAFITPQSMNEN 74
Query 70 LRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQREF 129
LR+LE V R GR L LT GR++ + EA V A + R+LA L A Q+R+
Sbjct 75 LRELEQRAWVIRHQHPDHGRILQTELTKAGRSVLRHCEAAVTAIEERMLAGLDAGQRRDL 134
>gi|291299584|ref|YP_003510862.1| MarR family transcriptional regulator [Stackebrandtia nassauensis
DSM 44728]
gi|290568804|gb|ADD41769.1| transcriptional regulator, MarR family [Stackebrandtia nassauensis
DSM 44728]
Length=150
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/113 (48%), Positives = 71/113 (63%), Gaps = 0/113 (0%)
Query 9 LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNT 68
+GY+L +V A L + L GL++ ++ CL +L+++PGLS+AELAR A VT QAMNT
Sbjct 14 MGYVLKQVQAALHGAMDERLRGHGLSVAQYACLELLAETPGLSNAELARGAFVTRQAMNT 73
Query 69 VLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARL 121
VLR L AG V RPA GR+ PA LT G AL A A V A + R++ L
Sbjct 74 VLRGLLAAGHVDRPAEAEYGRARPARLTDAGEALLAAARADVVAIEERMVTGL 126
>gi|332668805|ref|YP_004451812.1| regulatory protein MarR [Cellulomonas fimi ATCC 484]
gi|332337842|gb|AEE44425.1| regulatory protein MarR [Cellulomonas fimi ATCC 484]
Length=150
Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/128 (45%), Positives = 76/128 (60%), Gaps = 0/128 (0%)
Query 6 DAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQA 65
D +GY+L R A LR + AL PL L++P++ CL +L Q PGLS+AELAR A VT Q+
Sbjct 9 DTSIGYVLKRAAAALRASMDVALRPLSLSVPQYSCLELLGQRPGLSAAELARGAFVTRQS 68
Query 66 MNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQ 125
M+ VL LE G +ARPA+ GR++P+ LT GR L A VV + ++A L
Sbjct 69 MHAVLHGLEQRGLLARPATARRGRAMPSELTPAGRELLTAASRVVAEVERTMVASLPPGD 128
Query 126 QREFKRML 133
QR L
Sbjct 129 QRHLWSTL 136
>gi|300741878|ref|ZP_07071899.1| transcriptional regulator, MarR family [Rothia dentocariosa M567]
gi|300381063|gb|EFJ77625.1| transcriptional regulator, MarR family [Rothia dentocariosa M567]
Length=148
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 72/125 (58%), Gaps = 0/125 (0%)
Query 9 LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNT 68
+GY L V ++LR + L PLG+T+ ++VCL +L +PG S+AELAR A VT Q MN
Sbjct 10 IGYRLKEVQSLLRSRMEEVLRPLGITVAQYVCLEILKFTPGASNAELARQAFVTRQTMNM 69
Query 69 VLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQRE 128
+LR L++ + R GR+LP LT G + +A +R + ++ L+ +++E
Sbjct 70 LLRGLQERSLIERAEQAPRGRALPTMLTVEGERVLDQATGRIRDVEQHMVGGLSDAKRQE 129
Query 129 FKRML 133
+L
Sbjct 130 LWDLL 134
>gi|169629558|ref|YP_001703207.1| MarR family transcriptional regulator [Mycobacterium abscessus
ATCC 19977]
gi|169241525|emb|CAM62553.1| Putative transcriptional regulator, MarR family [Mycobacterium
abscessus]
Length=135
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/125 (37%), Positives = 74/125 (60%), Gaps = 0/125 (0%)
Query 9 LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNT 68
+G L+ ++ +L S + G+T+P+ CL +LS PG+S+ E+A +TPQA++
Sbjct 1 MGILVSQMYRLLWSRASVIVRDFGVTVPQMECLAVLSAQPGISNVEIAAELRITPQAVSL 60
Query 69 VLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQRE 128
V R LE+AG V R + R L LTA+GR L +RA+A +R D +LA +T + +
Sbjct 61 VQRSLEEAGLVHRSRRQADARVLTTELTAKGRKLFERADATLREDDEEILANMTERDRVQ 120
Query 129 FKRML 133
+R+L
Sbjct 121 LRRLL 125
>gi|337763036|emb|CCB71744.1| Transcriptional regulator [Streptomyces cattleya NRRL 8057]
Length=153
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/109 (44%), Positives = 65/109 (60%), Gaps = 0/109 (0%)
Query 9 LGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNT 68
+GYLL R A LR + L GLT+P++ L +L+ PG+S+A+LAR VT Q+ N
Sbjct 20 VGYLLKRAQAALRGAMDKVLREHGLTVPQYATLELLALHPGMSNADLARATFVTRQSGNV 79
Query 69 VLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARV 117
VLR L+DAG + RP + GR+ PA LT GRA + V A + R+
Sbjct 80 VLRGLQDAGLITRPTAPDHGRARPAHLTEEGRARLAAVQTAVYAVEQRM 128
>gi|134099341|ref|YP_001105002.1| MarR family transcriptional regulator [Saccharopolyspora erythraea
NRRL 2338]
gi|133911964|emb|CAM02077.1| transcriptional regulator, MarR family [Saccharopolyspora erythraea
NRRL 2338]
Length=153
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/124 (41%), Positives = 72/124 (59%), Gaps = 0/124 (0%)
Query 11 YLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNTVL 70
YL+ R+ V+R + AL P GLT +F L L + GLSSA+LAR + VTPQ MN ++
Sbjct 13 YLVKRLEQVIRARMDEALRPHGLTTLQFTALTALRRRDGLSSAQLARRSFVTPQTMNEMV 72
Query 71 RKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQREFK 130
R LE G + R + R L TLT GR+L +R + +V A +A +L + A Q F+
Sbjct 73 RWLEKHGHIERRRDPDNRRVLLITLTESGRSLLRRCDPLVEAIEAEMLGAVPAVQHPLFR 132
Query 131 RMLE 134
+ L+
Sbjct 133 QSLQ 136
>gi|291007273|ref|ZP_06565246.1| MarR family transcriptional regulator [Saccharopolyspora erythraea
NRRL 2338]
Length=168
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/124 (41%), Positives = 72/124 (59%), Gaps = 0/124 (0%)
Query 11 YLLYRVGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQAMNTVL 70
YL+ R+ V+R + AL P GLT +F L L + GLSSA+LAR + VTPQ MN ++
Sbjct 28 YLVKRLEQVIRARMDEALRPHGLTTLQFTALTALRRRDGLSSAQLARRSFVTPQTMNEMV 87
Query 71 RKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQREFK 130
R LE G + R + R L TLT GR+L +R + +V A +A +L + A Q F+
Sbjct 88 RWLEKHGHIERRRDPDNRRVLLITLTESGRSLLRRCDPLVEAIEAEMLGAVPAVQHPLFR 147
Query 131 RMLE 134
+ L+
Sbjct 148 QSLQ 151
Lambda K H
0.318 0.130 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131443546824
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40