BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2890c
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610027|ref|NP_217406.1| 30S ribosomal protein S2 [Mycobacte... 589 2e-166
gi|240170590|ref|ZP_04749249.1| 30S ribosomal protein S2 [Mycoba... 530 9e-149
gi|41409054|ref|NP_961890.1| 30S ribosomal protein S2 [Mycobacte... 518 5e-145
gi|296171502|ref|ZP_06852766.1| 30S ribosomal protein S2 [Mycoba... 516 1e-144
gi|254819056|ref|ZP_05224057.1| 30S ribosomal protein S2 [Mycoba... 513 1e-143
gi|183981832|ref|YP_001850123.1| 30S ribosomal protein S2 RpsB [... 511 6e-143
gi|209573701|sp|A0PQ79.2|RS2_MYCUA RecName: Full=30S ribosomal p... 510 1e-142
gi|15827838|ref|NP_302101.1| 30S ribosomal protein S2 [Mycobacte... 507 8e-142
gi|333991251|ref|YP_004523865.1| 30S ribosomal protein S2 RpsB [... 505 3e-141
gi|118617637|ref|YP_905969.1| 30S ribosomal protein S2 [Mycobact... 500 9e-140
gi|262202041|ref|YP_003273249.1| 30S ribosomal protein S2 [Gordo... 499 2e-139
gi|296139383|ref|YP_003646626.1| 30S ribosomal protein S2 [Tsuka... 498 3e-139
gi|326382899|ref|ZP_08204589.1| 30S ribosomal protein S2 [Gordon... 496 2e-138
gi|54026102|ref|YP_120344.1| 30S ribosomal protein S2 [Nocardia ... 496 2e-138
gi|209573699|sp|A0QVB8.2|RS2_MYCS2 RecName: Full=30S ribosomal p... 488 3e-136
gi|118469915|ref|YP_886856.1| 30S ribosomal protein S2 [Mycobact... 488 5e-136
gi|336441458|gb|AEI54954.1| 30S ribosomal protein S2 [Mycobacter... 486 1e-135
gi|336441462|gb|AEI54956.1| 30S ribosomal protein S2 [Mycobacter... 486 2e-135
gi|336441464|gb|AEI54957.1| 30S ribosomal protein S2 [Mycobacter... 485 3e-135
gi|169630278|ref|YP_001703927.1| 30s ribosomal protein S2 [Mycob... 485 3e-135
gi|336441466|gb|AEI54958.1| 30S ribosomal protein S2 [Mycobacter... 484 6e-135
gi|226366021|ref|YP_002783804.1| 30S ribosomal protein S2 [Rhodo... 481 5e-134
gi|343926724|ref|ZP_08766221.1| 30S ribosomal protein S2 [Gordon... 481 5e-134
gi|111023537|ref|YP_706509.1| 30S ribosomal protein S2 [Rhodococ... 481 5e-134
gi|145224713|ref|YP_001135391.1| 30S ribosomal protein S2 [Mycob... 481 7e-134
gi|342858260|ref|ZP_08714915.1| 30S ribosomal protein S2 [Mycoba... 480 9e-134
gi|312139236|ref|YP_004006572.1| 30S ribosomal protein s2 rpsb [... 479 2e-133
gi|108798961|ref|YP_639158.1| 30S ribosomal protein S2 [Mycobact... 479 3e-133
gi|226306029|ref|YP_002765989.1| 30S ribosomal protein S2 [Rhodo... 476 2e-132
gi|333919249|ref|YP_004492830.1| 30S ribosomal protein S2 [Amyco... 471 4e-131
gi|325673459|ref|ZP_08153150.1| 30S ribosomal protein S2 [Rhodoc... 469 2e-130
gi|296395047|ref|YP_003659931.1| 30S ribosomal protein S2 [Segni... 457 1e-126
gi|317508976|ref|ZP_07966609.1| ribosomal protein S2 [Segnilipar... 455 4e-126
gi|331698490|ref|YP_004334729.1| 30S ribosomal protein S2 [Pseud... 454 9e-126
gi|120403200|ref|YP_953029.1| 30S ribosomal protein S2 [Mycobact... 451 6e-125
gi|134102476|ref|YP_001108137.1| 30S ribosomal protein S2 [Sacch... 448 5e-124
gi|256379906|ref|YP_003103566.1| 30S ribosomal protein S2 [Actin... 447 9e-124
gi|300783892|ref|YP_003764183.1| 30S ribosomal protein S2 [Amyco... 445 3e-123
gi|325001879|ref|ZP_08122991.1| 30S ribosomal protein S2 [Pseudo... 445 4e-123
gi|302525188|ref|ZP_07277530.1| ribosomal protein S2 [Streptomyc... 442 2e-122
gi|86742262|ref|YP_482662.1| 30S ribosomal protein S2 [Frankia s... 441 7e-122
gi|258653279|ref|YP_003202435.1| 30S ribosomal protein S2 [Nakam... 439 2e-121
gi|209573717|sp|Q0RDQ4.2|RS2_FRAAA RecName: Full=30S ribosomal p... 437 6e-121
gi|336179486|ref|YP_004584861.1| 30S ribosomal protein S2 [Frank... 437 1e-120
gi|319948058|ref|ZP_08022232.1| 30S ribosomal protein S2 [Dietzi... 435 4e-120
gi|312194962|ref|YP_004015023.1| ribosomal protein S2 [Frankia s... 434 6e-120
gi|284992375|ref|YP_003410929.1| 30S ribosomal protein S2 [Geode... 433 1e-119
gi|158313013|ref|YP_001505521.1| 30S ribosomal protein S2 [Frank... 432 2e-119
gi|257055041|ref|YP_003132873.1| 30S ribosomal protein S2P [Sacc... 431 5e-119
gi|288922421|ref|ZP_06416609.1| ribosomal protein S2 [Frankia sp... 431 5e-119
>gi|15610027|ref|NP_217406.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis H37Rv]
gi|15842432|ref|NP_337469.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis CDC1551]
gi|31794066|ref|NP_856559.1| 30S ribosomal protein S2 [Mycobacterium bovis AF2122/97]
82 more sequence titles
Length=287
Score = 589 bits (1518), Expect = 2e-166, Method: Compositional matrix adjust.
Identities = 287/287 (100%), Positives = 287/287 (100%), Gaps = 0/287 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA
Sbjct 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
Query 241 EAAEPLAEWEQELLASATASATPSATASTTALTDAPAGATEPTTDAS 287
EAAEPLAEWEQELLASATASATPSATASTTALTDAPAGATEPTTDAS
Sbjct 241 EAAEPLAEWEQELLASATASATPSATASTTALTDAPAGATEPTTDAS 287
>gi|240170590|ref|ZP_04749249.1| 30S ribosomal protein S2 [Mycobacterium kansasii ATCC 12478]
Length=281
Score = 530 bits (1365), Expect = 9e-149, Method: Compositional matrix adjust.
Identities = 258/279 (93%), Positives = 264/279 (95%), Gaps = 5/279 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDM+KVPSAIWVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMSKVPSAIWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAGLGR DGKPEA
Sbjct 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGLGRGDGKPEA 240
Query 241 EAAEPLAEWEQELLASATASAT-----PSATASTTALTD 274
E AEPLAEWEQELLA+AT T P+A T + TD
Sbjct 241 ETAEPLAEWEQELLAAATTPVTAGAGDPTAETPTESTTD 279
>gi|41409054|ref|NP_961890.1| 30S ribosomal protein S2 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464674|ref|YP_882916.1| 30S ribosomal protein S2 [Mycobacterium avium 104]
gi|254776172|ref|ZP_05217688.1| 30S ribosomal protein S2 [Mycobacterium avium subsp. avium ATCC
25291]
gi|61215644|sp|Q73VQ7.1|RS2_MYCPA RecName: Full=30S ribosomal protein S2
gi|41397413|gb|AAS05273.1| RpsB [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118165961|gb|ABK66858.1| ribosomal protein S2 [Mycobacterium avium 104]
gi|336459056|gb|EGO38006.1| ribosomal protein S2 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=276
Score = 518 bits (1333), Expect = 5e-145, Method: Compositional matrix adjust.
Identities = 247/254 (98%), Positives = 252/254 (99%), Gaps = 0/254 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQES+AAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDM+KVPSAIWVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMSKVPSAIWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAG+GR DGKPE
Sbjct 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGVGRGDGKPEV 240
Query 241 EAAEPLAEWEQELL 254
EAAEPLAEWEQELL
Sbjct 241 EAAEPLAEWEQELL 254
>gi|296171502|ref|ZP_06852766.1| 30S ribosomal protein S2 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894064|gb|EFG73825.1| 30S ribosomal protein S2 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=277
Score = 516 bits (1329), Expect = 1e-144, Method: Compositional matrix adjust.
Identities = 249/254 (99%), Positives = 251/254 (99%), Gaps = 0/254 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAG+GR DGKPEA
Sbjct 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGVGRGDGKPEA 240
Query 241 EAAEPLAEWEQELL 254
EAAEPL EWEQELL
Sbjct 241 EAAEPLPEWEQELL 254
>gi|254819056|ref|ZP_05224057.1| 30S ribosomal protein S2 [Mycobacterium intracellulare ATCC 13950]
Length=278
Score = 513 bits (1321), Expect = 1e-143, Method: Compositional matrix adjust.
Identities = 246/254 (97%), Positives = 251/254 (99%), Gaps = 0/254 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFID+AYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDQAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKL+RSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLDRSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAG+GR DGKPEA
Sbjct 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGVGRGDGKPEA 240
Query 241 EAAEPLAEWEQELL 254
EAAEPL EWEQELL
Sbjct 241 EAAEPLPEWEQELL 254
>gi|183981832|ref|YP_001850123.1| 30S ribosomal protein S2 RpsB [Mycobacterium marinum M]
gi|183175158|gb|ACC40268.1| 30S ribosomal protein S2 RpsB [Mycobacterium marinum M]
Length=276
Score = 511 bits (1315), Expect = 6e-143, Method: Compositional matrix adjust.
Identities = 245/251 (98%), Positives = 247/251 (99%), Gaps = 0/251 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAG GR DGKP
Sbjct 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGAGRGDGKPVV 240
Query 241 EAAEPLAEWEQ 251
EAAEPLAEWEQ
Sbjct 241 EAAEPLAEWEQ 251
>gi|209573701|sp|A0PQ79.2|RS2_MYCUA RecName: Full=30S ribosomal protein S2
Length=276
Score = 510 bits (1313), Expect = 1e-142, Method: Compositional matrix adjust.
Identities = 244/251 (98%), Positives = 247/251 (99%), Gaps = 0/251 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGR+KKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRSKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAG GR DGKP
Sbjct 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGAGRGDGKPVV 240
Query 241 EAAEPLAEWEQ 251
EAAEPLAEWEQ
Sbjct 241 EAAEPLAEWEQ 251
>gi|15827838|ref|NP_302101.1| 30S ribosomal protein S2 [Mycobacterium leprae TN]
gi|221230315|ref|YP_002503731.1| 30S ribosomal protein S2 [Mycobacterium leprae Br4923]
gi|3122831|sp|O33038.1|RS2_MYCLE RecName: Full=30S ribosomal protein S2
gi|2251179|emb|CAB10657.1| 30s ribosomal protein s2 [Mycobacterium leprae]
gi|13093390|emb|CAC30549.1| 30S ribosomal protein S2 [Mycobacterium leprae]
gi|219933422|emb|CAR71693.1| 30S ribosomal protein S2 [Mycobacterium leprae Br4923]
Length=277
Score = 507 bits (1306), Expect = 8e-142, Method: Compositional matrix adjust.
Identities = 246/261 (95%), Positives = 248/261 (96%), Gaps = 0/261 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VA GG VLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VARGGLVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
+PVIAILDTNCDPDEVDYPIPGNDDAIRSA LLT VIASAVAEGLQ RAGL DGKPE
Sbjct 181 VPVIAILDTNCDPDEVDYPIPGNDDAIRSAELLTTVIASAVAEGLQVRAGLRCGDGKPET 240
Query 241 EAAEPLAEWEQELLASATASA 261
EA EPL EWEQELLA A +SA
Sbjct 241 EAVEPLPEWEQELLAGAGSSA 261
>gi|333991251|ref|YP_004523865.1| 30S ribosomal protein S2 RpsB [Mycobacterium sp. JDM601]
gi|333487219|gb|AEF36611.1| 30S ribosomal protein S2 RpsB [Mycobacterium sp. JDM601]
Length=280
Score = 505 bits (1300), Expect = 3e-141, Method: Compositional matrix adjust.
Identities = 242/254 (96%), Positives = 247/254 (98%), Gaps = 0/254 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGS++FVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGSIMFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDMAKVPSA+WVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMAKVPSAVWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPD VDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAG G +GK EA
Sbjct 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGQGNGEGKAEA 240
Query 241 EAAEPLAEWEQELL 254
EA EPLAEWEQELL
Sbjct 241 EAVEPLAEWEQELL 254
>gi|118617637|ref|YP_905969.1| 30S ribosomal protein S2 [Mycobacterium ulcerans Agy99]
gi|118569747|gb|ABL04498.1| 30S ribosomal protein S2 RpsB [Mycobacterium ulcerans Agy99]
Length=271
Score = 500 bits (1288), Expect = 9e-140, Method: Compositional matrix adjust.
Identities = 239/246 (98%), Positives = 242/246 (99%), Gaps = 0/246 (0%)
Query 6 MKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHGG 65
MKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHGG
Sbjct 1 MKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHGG 60
Query 66 SVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGG 125
+VLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGG
Sbjct 61 TVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGG 120
Query 126 FEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIA 185
FEGR+KKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIA
Sbjct 121 FEGRSKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIA 180
Query 186 ILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEAEAAEP 245
ILDTNCDPDEVDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAG GR DGKP EAAEP
Sbjct 181 ILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGAGRGDGKPVVEAAEP 240
Query 246 LAEWEQ 251
LAEWEQ
Sbjct 241 LAEWEQ 246
>gi|262202041|ref|YP_003273249.1| 30S ribosomal protein S2 [Gordonia bronchialis DSM 43247]
gi|262085388|gb|ACY21356.1| ribosomal protein S2 [Gordonia bronchialis DSM 43247]
Length=272
Score = 499 bits (1285), Expect = 2e-139, Method: Compositional matrix adjust.
Identities = 240/271 (89%), Positives = 249/271 (92%), Gaps = 0/271 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG++LFVGTKKQAQES+A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE M
Sbjct 61 VAHGGTILFVGTKKQAQESIAGEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELETM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLER+LGGIRDMAKVPSA+WVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERTLGGIRDMAKVPSAVWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPD VDYPIPGNDDAIRSAALLTRV+ASAVAEG+QARAG D KPEA
Sbjct 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTRVVASAVAEGVQARAGQASDDSKPEA 240
Query 241 EAAEPLAEWEQELLASATASATPSATASTTA 271
EPLAEWEQELL A A A + T ST A
Sbjct 241 GGGEPLAEWEQELLTQAAAPAGDAGTESTPA 271
>gi|296139383|ref|YP_003646626.1| 30S ribosomal protein S2 [Tsukamurella paurometabola DSM 20162]
gi|296027517|gb|ADG78287.1| ribosomal protein S2 [Tsukamurella paurometabola DSM 20162]
Length=282
Score = 498 bits (1283), Expect = 3e-139, Method: Compositional matrix adjust.
Identities = 246/287 (86%), Positives = 258/287 (90%), Gaps = 6/287 (2%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKE
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKEA 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQES+A EATRVGMPYVNQRWLGGMLTNF TVHKRLQR+KELE M
Sbjct 61 VAHGGTVLFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFQTVHKRLQRMKELETM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLER+LGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERTLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASAVAEG+QARAG+ D KPEA
Sbjct 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGVAGGDAKPEA 240
Query 241 EAAEPLAEWEQELLASAT-ASATPSATASTTALTDAPAGATEPTTDA 286
A EPLAEWEQELL SAT A+A A A T+APA A T +A
Sbjct 241 GAGEPLAEWEQELLESATVATAGDEAKA-----TEAPASAPTETPEA 282
>gi|326382899|ref|ZP_08204589.1| 30S ribosomal protein S2 [Gordonia neofelifaecis NRRL B-59395]
gi|326198489|gb|EGD55673.1| 30S ribosomal protein S2 [Gordonia neofelifaecis NRRL B-59395]
Length=272
Score = 496 bits (1276), Expect = 2e-138, Method: Compositional matrix adjust.
Identities = 237/271 (88%), Positives = 250/271 (93%), Gaps = 0/271 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTL++ID+AYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLSYIDRAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG++LFVGTKKQAQES+AAEATRVGMPYVNQRWLGGMLTNF+TVHKRLQR+KELE M
Sbjct 61 VAHGGTILFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFNTVHKRLQRMKELETM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLER+LGGIRDMAKVPSA+W+VDTNKEHIAVGEARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERTLGGIRDMAKVPSAVWIVDTNKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPD VDYPIP NDDAIRSAALLTRVIASAVAEG+QARAG D KPEA
Sbjct 181 IPVIAILDTNCDPDVVDYPIPANDDAIRSAALLTRVIASAVAEGVQARAGQTAGDAKPEA 240
Query 241 EAAEPLAEWEQELLASATASATPSATASTTA 271
EPLAEWEQELLA ATA AT AT + A
Sbjct 241 GEGEPLAEWEQELLAEATAPATDGATEAPAA 271
>gi|54026102|ref|YP_120344.1| 30S ribosomal protein S2 [Nocardia farcinica IFM 10152]
gi|61215421|sp|Q5YS61.1|RS2_NOCFA RecName: Full=30S ribosomal protein S2
gi|54017610|dbj|BAD58980.1| putative ribosomal protein S2 [Nocardia farcinica IFM 10152]
Length=285
Score = 496 bits (1276), Expect = 2e-138, Method: Compositional matrix adjust.
Identities = 237/258 (92%), Positives = 244/258 (95%), Gaps = 0/258 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQES+AAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTRE NKLER+LGGIRDM KVPSAIWVVDTNKEHIAVGEARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREMNKLERTLGGIRDMQKVPSAIWVVDTNKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASAVAEG+QARAGL D KPEA
Sbjct 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGLASGDAKPEA 240
Query 241 EAAEPLAEWEQELLASAT 258
A EPLAEWEQELLA A
Sbjct 241 GAGEPLAEWEQELLAQAN 258
>gi|209573699|sp|A0QVB8.2|RS2_MYCS2 RecName: Full=30S ribosomal protein S2
Length=277
Score = 488 bits (1257), Expect = 3e-136, Method: Compositional matrix adjust.
Identities = 236/254 (93%), Positives = 242/254 (96%), Gaps = 2/254 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQES+A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGTVLFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDM KVPSA+WVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAVWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPD VDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAG G G+ A
Sbjct 181 IPVIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGQG--SGEKPA 238
Query 241 EAAEPLAEWEQELL 254
E AEPLAEWEQELL
Sbjct 239 EGAEPLAEWEQELL 252
>gi|118469915|ref|YP_886856.1| 30S ribosomal protein S2 [Mycobacterium smegmatis str. MC2 155]
gi|118171202|gb|ABK72098.1| ribosomal protein S2 [Mycobacterium smegmatis str. MC2 155]
Length=291
Score = 488 bits (1255), Expect = 5e-136, Method: Compositional matrix adjust.
Identities = 236/254 (93%), Positives = 242/254 (96%), Gaps = 2/254 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 15 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 74
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQES+A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 75 VAHGGTVLFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 134
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDM KVPSA+WVVDTNKEHIAVGEARKLG
Sbjct 135 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAVWVVDTNKEHIAVGEARKLG 194
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPD VDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAG G G+ A
Sbjct 195 IPVIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGQG--SGEKPA 252
Query 241 EAAEPLAEWEQELL 254
E AEPLAEWEQELL
Sbjct 253 EGAEPLAEWEQELL 266
>gi|336441458|gb|AEI54954.1| 30S ribosomal protein S2 [Mycobacterium franklinii]
Length=282
Score = 486 bits (1252), Expect = 1e-135, Method: Compositional matrix adjust.
Identities = 233/258 (91%), Positives = 244/258 (95%), Gaps = 2/258 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGSV+FVGTKKQAQE +A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE+M
Sbjct 61 VAHGGSVMFVGTKKQAQEPIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDM KVPSAI+VVDTNKEH+AV EARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIFVVDTNKEHLAVAEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IP+IAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASA+AEGLQAR+GL AD KP
Sbjct 181 IPIIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAIAEGLQARSGLSGADEKP-- 238
Query 241 EAAEPLAEWEQELLASAT 258
EAAEPLAEWEQELLASA
Sbjct 239 EAAEPLAEWEQELLASAV 256
>gi|336441462|gb|AEI54956.1| 30S ribosomal protein S2 [Mycobacterium chelonae]
Length=277
Score = 486 bits (1250), Expect = 2e-135, Method: Compositional matrix adjust.
Identities = 233/260 (90%), Positives = 245/260 (95%), Gaps = 2/260 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGSV+FVGTKKQAQE +A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE+M
Sbjct 61 VAHGGSVMFVGTKKQAQEPIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDM KVPSAI+VVDTNKEH+AV EARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIFVVDTNKEHLAVAEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IP+IAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASA+AEGLQAR+GL D KP
Sbjct 181 IPIIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAIAEGLQARSGLAGGDEKP-- 238
Query 241 EAAEPLAEWEQELLASATAS 260
EAAEPLAEWEQELLASA A+
Sbjct 239 EAAEPLAEWEQELLASAVAT 258
>gi|336441464|gb|AEI54957.1| 30S ribosomal protein S2 [Mycobacterium immunogenum]
Length=277
Score = 485 bits (1249), Expect = 3e-135, Method: Compositional matrix adjust.
Identities = 234/268 (88%), Positives = 246/268 (92%), Gaps = 2/268 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGSV+FVGTKKQAQE +A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE+M
Sbjct 61 VAHGGSVMFVGTKKQAQEPIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDM KVPSAI+VVDTNKEH+AV EARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIFVVDTNKEHLAVAEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IP+IAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASA+AEGLQAR+GL D KP
Sbjct 181 IPIIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAIAEGLQARSGLAGGDEKP-- 238
Query 241 EAAEPLAEWEQELLASATASATPSATAS 268
EA EPLAEWEQELLASA A+ A S
Sbjct 239 EAGEPLAEWEQELLASAVATTDEGAAPS 266
>gi|169630278|ref|YP_001703927.1| 30s ribosomal protein S2 [Mycobacterium abscessus ATCC 19977]
gi|238688779|sp|B1MDF2.1|RS2_MYCA9 RecName: Full=30S ribosomal protein S2
gi|169242245|emb|CAM63273.1| 30s ribosomal protein S2 [Mycobacterium abscessus]
gi|336441456|gb|AEI54953.1| 30S ribosomal protein S2 [Mycobacterium abscessus]
gi|336441460|gb|AEI54955.1| 30S ribosomal protein S2 [Mycobacterium bolletii]
Length=277
Score = 485 bits (1249), Expect = 3e-135, Method: Compositional matrix adjust.
Identities = 233/268 (87%), Positives = 247/268 (93%), Gaps = 2/268 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGSV+FVGTKKQAQE +A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE+M
Sbjct 61 VAHGGSVMFVGTKKQAQEPIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDM KVPSAI+VVDTNKEH+AV EARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIFVVDTNKEHLAVAEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IP+IAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASA+AEGLQAR+GL D KP
Sbjct 181 IPIIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAIAEGLQARSGLAGGDEKP-- 238
Query 241 EAAEPLAEWEQELLASATASATPSATAS 268
EA EPLAEWEQELLASA A+ ++ S
Sbjct 239 EAGEPLAEWEQELLASAVATTDEASAPS 266
>gi|336441466|gb|AEI54958.1| 30S ribosomal protein S2 [Mycobacterium massiliense]
Length=277
Score = 484 bits (1246), Expect = 6e-135, Method: Compositional matrix adjust.
Identities = 232/260 (90%), Positives = 244/260 (94%), Gaps = 2/260 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGSV+FVGTKKQAQE +A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE+M
Sbjct 61 VAHGGSVMFVGTKKQAQEPIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDM KVPSAI+VVDTNKEH+AV EARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIFVVDTNKEHLAVAEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IP+IAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASA+AEGLQAR+GL D KP
Sbjct 181 IPIIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAIAEGLQARSGLAGGDEKP-- 238
Query 241 EAAEPLAEWEQELLASATAS 260
EA EPLAEWEQELLASA A+
Sbjct 239 EAGEPLAEWEQELLASAVAT 258
>gi|226366021|ref|YP_002783804.1| 30S ribosomal protein S2 [Rhodococcus opacus B4]
gi|254764487|sp|C1B2U2.1|RS2_RHOOB RecName: Full=30S ribosomal protein S2
gi|226244511|dbj|BAH54859.1| 30S ribosomal protein S2 [Rhodococcus opacus B4]
Length=288
Score = 481 bits (1239), Expect = 5e-134, Method: Compositional matrix adjust.
Identities = 230/256 (90%), Positives = 242/256 (95%), Gaps = 1/256 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQES+AAEATRVGMPYVNQRWLGGMLTNF+TVHKRL RLKELEAM
Sbjct 61 VAHGGTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFTTVHKRLLRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTRE KL+R+LGGIRDMAKVPSA+WVVDTNKEH+AV EARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAVWVVDTNKEHLAVAEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGR-ADGKPE 239
IPVIAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASAVAEG+QARAGL D KPE
Sbjct 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGLSSDKDAKPE 240
Query 240 AEAAEPLAEWEQELLA 255
A A EPLAEWEQELL+
Sbjct 241 AGAGEPLAEWEQELLS 256
>gi|343926724|ref|ZP_08766221.1| 30S ribosomal protein S2 [Gordonia alkanivorans NBRC 16433]
gi|343763323|dbj|GAA13147.1| 30S ribosomal protein S2 [Gordonia alkanivorans NBRC 16433]
Length=273
Score = 481 bits (1238), Expect = 5e-134, Method: Compositional matrix adjust.
Identities = 242/277 (88%), Positives = 252/277 (91%), Gaps = 6/277 (2%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG++LFVGTKKQAQES+AAEATRVGMPYVNQRWLGGMLTNF+TVHKRLQR+KELE M
Sbjct 61 VAHGGTILFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFNTVHKRLQRMKELETM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLER+LGGIRDMAKVPSA+WVVDTNKEHIAVGEARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERTLGGIRDMAKVPSAVWVVDTNKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPVIAILDTNCDPD VDYPIPGNDDAIRSAALLTRV+ASAVAEGLQARAG D KPEA
Sbjct 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTRVVASAVAEGLQARAGAAGGDAKPEA 240
Query 241 EAAEPLAEWEQELLASATASATPSATASTTALTDAPA 277
A EPLAEWEQELL A +A A A TDAPA
Sbjct 241 AAGEPLAEWEQELLTQA------AAPAGGEAATDAPA 271
>gi|111023537|ref|YP_706509.1| 30S ribosomal protein S2 [Rhodococcus jostii RHA1]
gi|123339669|sp|Q0S285.1|RS2_RHOSR RecName: Full=30S ribosomal protein S2
gi|110823067|gb|ABG98351.1| 30S ribosomal protein S2 [Rhodococcus jostii RHA1]
Length=300
Score = 481 bits (1238), Expect = 5e-134, Method: Compositional matrix adjust.
Identities = 230/256 (90%), Positives = 242/256 (95%), Gaps = 1/256 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQES+AAEATRVGMPYVNQRWLGGMLTNF+TVHKRL RLKELEAM
Sbjct 61 VAHGGTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFTTVHKRLLRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTRE KL+R+LGGIRDMAKVPSA+WVVDTNKEH+AV EARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAVWVVDTNKEHLAVAEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGL-GRADGKPE 239
IPVIAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASAVAEG+QARAGL D KPE
Sbjct 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGLSADKDAKPE 240
Query 240 AEAAEPLAEWEQELLA 255
A A EPLAEWEQELL+
Sbjct 241 AGAGEPLAEWEQELLS 256
>gi|145224713|ref|YP_001135391.1| 30S ribosomal protein S2 [Mycobacterium gilvum PYR-GCK]
gi|315445043|ref|YP_004077922.1| 30S ribosomal protein S2P [Mycobacterium sp. Spyr1]
gi|189044945|sp|A4TC67.1|RS2_MYCGI RecName: Full=30S ribosomal protein S2
gi|145217199|gb|ABP46603.1| SSU ribosomal protein S2P [Mycobacterium gilvum PYR-GCK]
gi|315263346|gb|ADU00088.1| SSU ribosomal protein S2P [Mycobacterium sp. Spyr1]
Length=279
Score = 481 bits (1237), Expect = 7e-134, Method: Compositional matrix adjust.
Identities = 229/256 (90%), Positives = 240/256 (94%), Gaps = 2/256 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+ID AYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDSAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGS++FVGTKKQAQES+A EATRVGMPYVNQRWLGGMLTNF TVHKRLQR+KELEAM
Sbjct 61 VAHGGSIMFVGTKKQAQESIAQEATRVGMPYVNQRWLGGMLTNFQTVHKRLQRMKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEH+AV EARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHLAVAEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLG--RADGKP 238
IP+IAILDTNCDPD VDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAG G +A+
Sbjct 181 IPIIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGAGADKAEAGQ 240
Query 239 EAEAAEPLAEWEQELL 254
+ AAEPLAEWEQELL
Sbjct 241 DGAAAEPLAEWEQELL 256
>gi|342858260|ref|ZP_08714915.1| 30S ribosomal protein S2 [Mycobacterium colombiense CECT 3035]
gi|342133964|gb|EGT87144.1| 30S ribosomal protein S2 [Mycobacterium colombiense CECT 3035]
Length=272
Score = 480 bits (1236), Expect = 9e-134, Method: Compositional matrix adjust.
Identities = 242/249 (98%), Positives = 246/249 (99%), Gaps = 0/249 (0%)
Query 6 MKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHGG 65
MKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFID+AYEFVKETVAHGG
Sbjct 1 MKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDQAYEFVKETVAHGG 60
Query 66 SVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGG 125
SVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNF TVHKRLQRLKELEAMEQTGG
Sbjct 61 SVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFQTVHKRLQRLKELEAMEQTGG 120
Query 126 FEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIA 185
FEGRTKKEIL LTREKNKL+RSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIA
Sbjct 121 FEGRTKKEILMLTREKNKLDRSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIA 180
Query 186 ILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEAEAAEP 245
ILDTNCDPDEVDYPIPGNDDAIRSAALLT+VIASAVAEGLQARAG+GR DGKPEAEAAEP
Sbjct 181 ILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGVGRGDGKPEAEAAEP 240
Query 246 LAEWEQELL 254
LAEWEQELL
Sbjct 241 LAEWEQELL 249
>gi|312139236|ref|YP_004006572.1| 30S ribosomal protein s2 rpsb [Rhodococcus equi 103S]
gi|311888575|emb|CBH47887.1| 30S ribosomal protein S2 RpsB [Rhodococcus equi 103S]
Length=276
Score = 479 bits (1233), Expect = 2e-133, Method: Compositional matrix adjust.
Identities = 229/256 (90%), Positives = 240/256 (94%), Gaps = 1/256 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTM+QLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG++LFVGTKKQAQES+A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE+M
Sbjct 61 VAHGGTILFVGTKKQAQESIAGEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTRE KL+R+LGGIRDMAKVPSAIWVVDTNKEHIAVGEARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGL-GRADGKPE 239
IPVIAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASAVAEGLQARAG D KPE
Sbjct 181 IPVIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAVAEGLQARAGASADKDAKPE 240
Query 240 AEAAEPLAEWEQELLA 255
A EPLAEWEQELL+
Sbjct 241 AGTGEPLAEWEQELLS 256
>gi|108798961|ref|YP_639158.1| 30S ribosomal protein S2 [Mycobacterium sp. MCS]
gi|119868076|ref|YP_938028.1| 30S ribosomal protein S2 [Mycobacterium sp. KMS]
gi|126434561|ref|YP_001070252.1| 30S ribosomal protein S2 [Mycobacterium sp. JLS]
6 more sequence titles
Length=284
Score = 479 bits (1232), Expect = 3e-133, Method: Compositional matrix adjust.
Identities = 248/283 (88%), Positives = 258/283 (92%), Gaps = 4/283 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGS++FVGTKKQAQES+A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGSIMFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDM KVPSAIWVVDTNKEH+AV EARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIWVVDTNKEHLAVAEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IP+IAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASAVAEGLQARAG G + KPEA
Sbjct 181 IPIIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAVAEGLQARAGGGNGN-KPEA 239
Query 241 EAAEPLAEWEQELLASATASATPSATASTTALTDAPAGATEPT 283
EAAEPLAEWEQELLA ATAS T + A T D TEPT
Sbjct 240 EAAEPLAEWEQELLAGATASPTAAGAAPGTPEADI---QTEPT 279
>gi|226306029|ref|YP_002765989.1| 30S ribosomal protein S2 [Rhodococcus erythropolis PR4]
gi|229491372|ref|ZP_04385196.1| ribosomal protein S2 [Rhodococcus erythropolis SK121]
gi|259495222|sp|C0ZY15.1|RS2_RHOE4 RecName: Full=30S ribosomal protein S2
gi|226185146|dbj|BAH33250.1| 30S ribosomal protein S2 [Rhodococcus erythropolis PR4]
gi|229321657|gb|EEN87454.1| ribosomal protein S2 [Rhodococcus erythropolis SK121]
Length=285
Score = 476 bits (1225), Expect = 2e-132, Method: Compositional matrix adjust.
Identities = 226/256 (89%), Positives = 241/256 (95%), Gaps = 1/256 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQ+LDSGTHFGHQTRRWNPKMKRFI TDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQMLDSGTHFGHQTRRWNPKMKRFILTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQES+A+EATRVGMPYVNQRWLGGMLTNF+TVHKRL RLKELEAM
Sbjct 61 VAHGGTVLFVGTKKQAQESIASEATRVGMPYVNQRWLGGMLTNFTTVHKRLLRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTRE KL+R+LGGIRDMAKVPSA+W+VDTNKEH+AV EARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAVWIVDTNKEHLAVAEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGL-GRADGKPE 239
IPVIAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASAVAEG+QARAGL D KPE
Sbjct 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGLSADKDAKPE 240
Query 240 AEAAEPLAEWEQELLA 255
A A EPLAEWEQELL+
Sbjct 241 AGAGEPLAEWEQELLS 256
>gi|333919249|ref|YP_004492830.1| 30S ribosomal protein S2 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481470|gb|AEF40030.1| 30S ribosomal protein S2 [Amycolicicoccus subflavus DQS3-9A1]
Length=286
Score = 471 bits (1213), Expect = 4e-131, Method: Compositional matrix adjust.
Identities = 225/261 (87%), Positives = 245/261 (94%), Gaps = 2/261 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDL+QTL++IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLRQTLSYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG++LFVGTKKQAQES+A EATRVGMPYVNQRWLGGMLTNF TVHKRLQRLKELE+M
Sbjct 61 VAHGGTILFVGTKKQAQESIAGEATRVGMPYVNQRWLGGMLTNFQTVHKRLQRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREK KLER+LGGIRDMAKVPSA+W+VDTNKEHIAVGEARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKTKLERTLGGIRDMAKVPSAVWIVDTNKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPV+AILDTNCDPD VDYPIPGNDDAIRSAALLTRV+A+AVA+GLQARAGL + G +
Sbjct 181 IPVVAILDTNCDPDLVDYPIPGNDDAIRSAALLTRVVAAAVADGLQARAGLNTS-GDEKG 239
Query 241 EAAEPLAEWEQELLASATASA 261
E AEPLA+WE+ELL SA+ +A
Sbjct 240 E-AEPLADWEKELLESASPAA 259
>gi|325673459|ref|ZP_08153150.1| 30S ribosomal protein S2 [Rhodococcus equi ATCC 33707]
gi|325555480|gb|EGD25151.1| 30S ribosomal protein S2 [Rhodococcus equi ATCC 33707]
Length=271
Score = 469 bits (1208), Expect = 2e-130, Method: Compositional matrix adjust.
Identities = 224/251 (90%), Positives = 235/251 (94%), Gaps = 1/251 (0%)
Query 6 MKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHGG 65
M+QLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKETVAHGG
Sbjct 1 MRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHGG 60
Query 66 SVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGG 125
++LFVGTKKQAQES+A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE+MEQTGG
Sbjct 61 TILFVGTKKQAQESIAGEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESMEQTGG 120
Query 126 FEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIA 185
FEGRTKKEIL LTRE KL+R+LGGIRDMAKVPSAIWVVDTNKEHIAVGEARKL IPVIA
Sbjct 121 FEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLNIPVIA 180
Query 186 ILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGL-GRADGKPEAEAAE 244
ILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASAVAEGLQARAG D KPEA E
Sbjct 181 ILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAVAEGLQARAGASADKDAKPEAGTGE 240
Query 245 PLAEWEQELLA 255
PLAEWEQELL+
Sbjct 241 PLAEWEQELLS 251
>gi|296395047|ref|YP_003659931.1| 30S ribosomal protein S2 [Segniliparus rotundus DSM 44985]
gi|296182194|gb|ADG99100.1| ribosomal protein S2 [Segniliparus rotundus DSM 44985]
Length=287
Score = 457 bits (1175), Expect = 1e-126, Method: Compositional matrix adjust.
Identities = 218/255 (86%), Positives = 232/255 (91%), Gaps = 4/255 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTM+QLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT ID+AYEFVKET
Sbjct 1 MAVVTMRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTAIDRAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG++LFVGTKKQAQE +A EA RVGMPYVNQRWLGGMLTNF TVHKRLQRLKELE+M
Sbjct 61 VAHGGTILFVGTKKQAQEPIATEAARVGMPYVNQRWLGGMLTNFQTVHKRLQRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGF GRTKKEILGLTRE NKL+RSLGG+RDMAK+PSA+WVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFSGRTKKEILGLTREMNKLDRSLGGLRDMAKLPSALWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPV+AILDTNCDPD VDYPIP NDDAIRSAALLTRV+A+AVA+GLQ RA G
Sbjct 181 IPVVAILDTNCDPDLVDYPIPANDDAIRSAALLTRVVATAVADGLQQRASQRGGKGGE-- 238
Query 241 EAAEPLAEWEQELLA 255
AEPLAEWEQELLA
Sbjct 239 --AEPLAEWEQELLA 251
>gi|317508976|ref|ZP_07966609.1| ribosomal protein S2 [Segniliparus rugosus ATCC BAA-974]
gi|316252741|gb|EFV12178.1| ribosomal protein S2 [Segniliparus rugosus ATCC BAA-974]
Length=279
Score = 455 bits (1170), Expect = 4e-126, Method: Compositional matrix adjust.
Identities = 217/257 (85%), Positives = 233/257 (91%), Gaps = 4/257 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTM+QLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT ID+AYEFVKET
Sbjct 1 MAVVTMRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTSIDRAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG++LFVGTKKQAQE +A EA RVGMPYVNQRWLGGMLTNF TVHKRLQRLKELE+M
Sbjct 61 VAHGGTILFVGTKKQAQEPIATEALRVGMPYVNQRWLGGMLTNFQTVHKRLQRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGF GRTKKEILGLTRE NKL+RSLGG+RDMAK+PSA+WVVDTNKEHIAVGEARKLG
Sbjct 121 EQTGGFAGRTKKEILGLTREMNKLDRSLGGLRDMAKLPSALWVVDTNKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPV+AILDTNCDPD VDYPIP NDDAIRSAALLTRV+A+AVA+GLQ R+ + G
Sbjct 181 IPVVAILDTNCDPDLVDYPIPANDDAIRSAALLTRVVATAVADGLQQRSSQRGSQGG--- 237
Query 241 EAAEPLAEWEQELLASA 257
AEPLAEWEQELLA
Sbjct 238 -EAEPLAEWEQELLAQG 253
>gi|331698490|ref|YP_004334729.1| 30S ribosomal protein S2 [Pseudonocardia dioxanivorans CB1190]
gi|326953179|gb|AEA26876.1| ribosomal protein S2 [Pseudonocardia dioxanivorans CB1190]
Length=300
Score = 454 bits (1167), Expect = 9e-126, Method: Compositional matrix adjust.
Identities = 213/272 (79%), Positives = 242/272 (89%), Gaps = 4/272 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKR+I T+RNGIYIIDLQQTL++ID+AYEFV+ET
Sbjct 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAYEFVRET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+++FVGTKKQAQE++A EA RV MPYVNQRWLGGMLTNF TVHKRLQRLKELE+M
Sbjct 61 VAHGGTIMFVGTKKQAQEAIAEEAGRVNMPYVNQRWLGGMLTNFQTVHKRLQRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREK+KLE++LGGIRDM+KVPSA+WVVDT KEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILMLTREKDKLEKTLGGIRDMSKVPSAVWVVDTKKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARA----GLGRADG 236
IPV++ILDTNCDPDEVD+PIPGNDDAIRSAALLT+VIA A A+GL AR+ G A+G
Sbjct 181 IPVVSILDTNCDPDEVDFPIPGNDDAIRSAALLTKVIARAAADGLMARSARSGGRDGAEG 240
Query 237 KPEAEAAEPLAEWEQELLASATASATPSATAS 268
KPE + EPL EWEQ+LLA+ + A+ S
Sbjct 241 KPEVGSDEPLPEWEQDLLANGGEVGSDGASLS 272
>gi|120403200|ref|YP_953029.1| 30S ribosomal protein S2 [Mycobacterium vanbaalenii PYR-1]
gi|166225286|sp|A1T773.1|RS2_MYCVP RecName: Full=30S ribosomal protein S2
gi|119956018|gb|ABM13023.1| SSU ribosomal protein S2P [Mycobacterium vanbaalenii PYR-1]
Length=273
Score = 451 bits (1160), Expect = 6e-125, Method: Compositional matrix adjust.
Identities = 211/226 (94%), Positives = 219/226 (97%), Gaps = 0/226 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLT+IDKAYEFVKET
Sbjct 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGS++FVGTKKQAQES+A EATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM
Sbjct 61 VAHGGSIMFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLERSLGGIRDM KVPSAIWVVDTNKEH+AV EARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIWVVDTNKEHLAVAEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQ 226
IP+IAILDTNCDPD VDYPIPGNDDAIRSAALLT+V+ASAVAEGLQ
Sbjct 181 IPIIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGLQ 226
>gi|134102476|ref|YP_001108137.1| 30S ribosomal protein S2 [Saccharopolyspora erythraea NRRL 2338]
gi|291004133|ref|ZP_06562106.1| 30S ribosomal protein S2 [Saccharopolyspora erythraea NRRL 2338]
gi|133915099|emb|CAM05212.1| 30S ribosomal protein S2 [Saccharopolyspora erythraea NRRL 2338]
Length=274
Score = 448 bits (1152), Expect = 5e-124, Method: Compositional matrix adjust.
Identities = 209/256 (82%), Positives = 235/256 (92%), Gaps = 2/256 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKR+I T+RNGIYIIDLQQTL++ID AY+FVK+T
Sbjct 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDGAYDFVKQT 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG++LFVGTKKQAQE++A +A RVGMP+VNQRWLGGMLTNF TVHKRLQRLKELE M
Sbjct 61 VAHGGTILFVGTKKQAQEAIAEQALRVGMPFVNQRWLGGMLTNFQTVHKRLQRLKELETM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREK+KLE++LGGIRDM+KVPSA+W+VDT KEHIAVGEARKLG
Sbjct 121 EQTGGFEGRTKKEILMLTREKDKLEKTLGGIRDMSKVPSAVWIVDTKKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGL--GRADGKP 238
IPV+AILDTNCDPDEVDYPIPGNDDAIRSAALLTRV+A VA+GL AR+G G A+G+
Sbjct 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADGVADGLMARSGRTNGAAEGEE 240
Query 239 EAEAAEPLAEWEQELL 254
+ EPLAEWE+ELL
Sbjct 241 KPAGGEPLAEWEKELL 256
>gi|256379906|ref|YP_003103566.1| 30S ribosomal protein S2 [Actinosynnema mirum DSM 43827]
gi|255924209|gb|ACU39720.1| ribosomal protein S2 [Actinosynnema mirum DSM 43827]
Length=304
Score = 447 bits (1150), Expect = 9e-124, Method: Compositional matrix adjust.
Identities = 209/260 (81%), Positives = 236/260 (91%), Gaps = 4/260 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKR+IFT+RNGIYIIDL QTLT+ID+A+EFV+ET
Sbjct 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLMQTLTYIDRAFEFVRET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGS+LF+GTKKQAQE++A EA RVGMP+VNQRWLGGMLTNFSTVHKRLQRLKELE+M
Sbjct 61 VAHGGSILFIGTKKQAQEAIANEALRVGMPFVNQRWLGGMLTNFSTVHKRLQRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGF+G TKKEIL + REK+KLER+LGGIRDM+KVPSA+W+VDT KEHIAVGEARKL
Sbjct 121 EQTGGFQGFTKKEILMMNREKDKLERTLGGIRDMSKVPSAVWIVDTKKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGL--GRADG-- 236
IP++AILDTNCDPDEVDYPIPGNDDAIRSAALLT+V+A A A GL +R+G+ G A G
Sbjct 181 IPIVAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVVAEAAAAGLMSRSGVRTGNAGGAE 240
Query 237 KPEAEAAEPLAEWEQELLAS 256
KPE EPLAEWEQELL +
Sbjct 241 KPEPGTDEPLAEWEQELLVN 260
>gi|300783892|ref|YP_003764183.1| 30S ribosomal protein S2 [Amycolatopsis mediterranei U32]
gi|299793406|gb|ADJ43781.1| small subunit ribosomal protein S2 [Amycolatopsis mediterranei
U32]
gi|340525287|gb|AEK40492.1| 30S ribosomal protein S2 [Amycolatopsis mediterranei S699]
Length=291
Score = 445 bits (1145), Expect = 3e-123, Method: Compositional matrix adjust.
Identities = 211/261 (81%), Positives = 233/261 (90%), Gaps = 4/261 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKR+IFT+RNGIYIIDLQQTLT+ID+AYEF+KET
Sbjct 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQQTLTYIDRAYEFIKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+++FVGTKKQAQE++A EA RVGMPYVNQRWLGGMLTNF TVHKRL RLKELEA
Sbjct 61 VAHGGTIMFVGTKKQAQEAIANEAARVGMPYVNQRWLGGMLTNFQTVHKRLLRLKELEAR 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEG TK+EIL LTREK+KLE++LGGIRDMAKVPSA+W+VDT KEHIAVGEARKL
Sbjct 121 EQTGGFEGLTKREILTLTREKDKLEKTLGGIRDMAKVPSAVWIVDTKKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLG--RADGKP 238
IPV+AILDTNCDPDEVDYPIPGNDDAIRSAALLT+V+A A A GL R+ AD KP
Sbjct 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVVAEAAAAGLMQRSSRNGASADSKP 240
Query 239 E--AEAAEPLAEWEQELLASA 257
E A EPLAEWE+ELLA +
Sbjct 241 EPGVAADEPLAEWEKELLAGS 261
>gi|325001879|ref|ZP_08122991.1| 30S ribosomal protein S2 [Pseudonocardia sp. P1]
Length=286
Score = 445 bits (1144), Expect = 4e-123, Method: Compositional matrix adjust.
Identities = 206/255 (81%), Positives = 235/255 (93%), Gaps = 3/255 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKR+I T+RNGIYIIDLQQTL++ID+AYEFV+ET
Sbjct 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAYEFVRET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+++FVGTKKQAQE++A EA RV MPYVNQRWLGGMLTNF TVHKRLQRLKELEAM
Sbjct 61 VAHGGTIMFVGTKKQAQEAIAEEAGRVNMPYVNQRWLGGMLTNFQTVHKRLQRLKELEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTK+EIL LTREK+KLE++LGGIRDM+KVPSA+W+VDT KEHIAVGEARKL
Sbjct 121 EQTGGFEGRTKREILTLTREKDKLEKTLGGIRDMSKVPSAVWIVDTKKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPV++ILDTNCDPDEVD+PIPGNDDAIRSAALLT+VIA A A+GL +R G+ G+ EA
Sbjct 181 IPVVSILDTNCDPDEVDFPIPGNDDAIRSAALLTKVIAKAAADGLVSR---GQRRGEGEA 237
Query 241 EAAEPLAEWEQELLA 255
A +PLAEWEQ++LA
Sbjct 238 AAEQPLAEWEQDVLA 252
>gi|302525188|ref|ZP_07277530.1| ribosomal protein S2 [Streptomyces sp. AA4]
gi|302434083|gb|EFL05899.1| ribosomal protein S2 [Streptomyces sp. AA4]
Length=297
Score = 442 bits (1138), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 212/260 (82%), Positives = 235/260 (91%), Gaps = 3/260 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKR+IFT+RNGIYIIDLQQTLT+ID+AYEF+KET
Sbjct 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQQTLTYIDRAYEFIKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+++FVGTKKQAQE++A EA RVGMPYVNQRWLGGMLTNF TVHKRL RLKELEA
Sbjct 61 VAHGGTIMFVGTKKQAQEAIANEAARVGMPYVNQRWLGGMLTNFQTVHKRLLRLKELEAQ 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGF G TK+EIL LTREK+KLE++LGGIRDMAKVPSA+W+VDT KEHIAVGEARKL
Sbjct 121 EQTGGFAGLTKREILTLTREKDKLEKTLGGIRDMAKVPSAVWIVDTKKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLG--RADGKP 238
IPV+AILDTNCDPDEVDYPIPGNDDAIRSAALLT+V+A A A GL AR+G AD KP
Sbjct 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVVAEAAAAGLMARSGRNGASADAKP 240
Query 239 EAEAA-EPLAEWEQELLASA 257
E A+ EPLAEWE+ELLA +
Sbjct 241 ETGASDEPLAEWEKELLAGS 260
>gi|86742262|ref|YP_482662.1| 30S ribosomal protein S2 [Frankia sp. CcI3]
gi|86569124|gb|ABD12933.1| SSU ribosomal protein S2P [Frankia sp. CcI3]
Length=289
Score = 441 bits (1134), Expect = 7e-122, Method: Compositional matrix adjust.
Identities = 216/284 (77%), Positives = 239/284 (85%), Gaps = 5/284 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLL+SG HFGHQT+RWNPKMKR+IFT+RNGIYIIDLQQTL++ID+AY+FVKET
Sbjct 1 MAVVTMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLF+GTKKQAQE++ A RVGMPYV +RWLGGMLTNFSTV+KRLQRLKELE +
Sbjct 61 VAHGGTVLFIGTKKQAQEAIEEHAARVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEI 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
E TGG E RTKKE L LTREK KLER+LGGIRDM++VPSA+WVVDT KEHIAVGEARKLG
Sbjct 121 EVTGGTEVRTKKEQLVLTREKVKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGL-GRADGKPE 239
IPV+AILDTNCDPDEVDYPIPGNDDAIRSAALLTRV+A AVA+GL ARAG AD KPE
Sbjct 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVADGLMARAGASSSADAKPE 240
Query 240 AEAA-EPLAEWEQELLASATASATPSATASTTALTDAPAGATEP 282
A EPLAEWEQ LL + P A TA PA T P
Sbjct 241 QSAGEEPLAEWEQALLRGEAPAEAPGAVEPATA---EPADGTRP 281
>gi|258653279|ref|YP_003202435.1| 30S ribosomal protein S2 [Nakamurella multipartita DSM 44233]
gi|258556504|gb|ACV79446.1| ribosomal protein S2 [Nakamurella multipartita DSM 44233]
Length=296
Score = 439 bits (1129), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 209/268 (78%), Positives = 238/268 (89%), Gaps = 8/268 (2%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTM+Q+LD+G HFGHQTRRWNPKMKRFIFT+RNGIYIIDLQQTL ++D+A+EFVKET
Sbjct 1 MAVVTMRQMLDAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQTLQYVDRAFEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG++LFVGTK+QAQE++A +ATRV MPYVNQRWLGGMLTNF TVHKRLQRLK+LEAM
Sbjct 61 VAHGGTILFVGTKRQAQEAIAEQATRVNMPYVNQRWLGGMLTNFQTVHKRLQRLKDLEAM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
E +G FEGRTKKE+L LTREK+KL ++LGGIRDMAKVPSA+W+VDT KEHIAVGEARKL
Sbjct 121 ETSGEFEGRTKKEVLLLTREKDKLAKTLGGIRDMAKVPSAVWIVDTKKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPV+A+LDTNCDPDEVDYP+PGNDDAIRSAALLT+VIA AVA GL AR+G G A G E
Sbjct 181 IPVVAVLDTNCDPDEVDYPVPGNDDAIRSAALLTKVIAEAVAAGLIARSG-GAAGGTQE- 238
Query 241 EAAEPLAEWEQELLASATASATPSATAS 268
EPLAEWE+ELLA AS P AT +
Sbjct 239 ---EPLAEWERELLA---ASEQPVATTA 260
>gi|209573717|sp|Q0RDQ4.2|RS2_FRAAA RecName: Full=30S ribosomal protein S2
Length=291
Score = 437 bits (1125), Expect = 6e-121, Method: Compositional matrix adjust.
Identities = 208/256 (82%), Positives = 232/256 (91%), Gaps = 2/256 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLL+SG HFGHQT+RWNPKMKR+IFT+RNGIYIIDLQQTL++ID+AY+FVKET
Sbjct 1 MAVVTMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLF+GTKKQAQE++ +A RVGMPYV +RWLGGMLTNFSTV+KRLQRLKELE +
Sbjct 61 VAHGGTVLFIGTKKQAQEAIEEQAARVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEI 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
E TGG E RTKKE L LTREK KLER+LGGIRDM++VPSA+WVVDT KEHIAVGEARKLG
Sbjct 121 EVTGGTEVRTKKEQLVLTREKAKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGR-ADGKPE 239
IPV+AILDTNCDPDEVDYPIPGNDDAIRSAALLTRV+A AVA+GL ARAG + AD KPE
Sbjct 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVADGLMARAGASKAADAKPE 240
Query 240 AEAA-EPLAEWEQELL 254
A EPLAEWEQ LL
Sbjct 241 QSAGEEPLAEWEQALL 256
>gi|336179486|ref|YP_004584861.1| 30S ribosomal protein S2 [Frankia symbiont of Datisca glomerata]
gi|334860466|gb|AEH10940.1| ribosomal protein S2 [Frankia symbiont of Datisca glomerata]
Length=305
Score = 437 bits (1124), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 211/271 (78%), Positives = 235/271 (87%), Gaps = 2/271 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLL+SG HFGHQT+RWNPKMKRFIFT+RNGIYIIDLQQTL++ID+AY+FVKET
Sbjct 1 MAVVTMKQLLESGVHFGHQTKRWNPKMKRFIFTERNGIYIIDLQQTLSYIDRAYDFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLF+GTKKQAQE++ +A RVGMPYV +RWLGGMLTNFSTV+KRLQRLKELE +
Sbjct 61 VAHGGTVLFIGTKKQAQEAIEEQAQRVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEI 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
E TGG E RTKKE L L+REK KLER+LGGIRDM +VPSA+WVVDT KEHIAVGEARKLG
Sbjct 121 ELTGGTEVRTKKEQLVLSREKAKLERTLGGIRDMTRVPSAVWVVDTKKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARA-GLGRADGKPE 239
IPV+AILDTNCDPDEVDYPIPGNDDAIRSA LLTRV+A AVA+GL ARA G AD KPE
Sbjct 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSATLLTRVVADAVADGLVARAGGTTSADVKPE 240
Query 240 A-EAAEPLAEWEQELLASATASATPSATAST 269
EPL EWEQELL +SA ATA +
Sbjct 241 TPSGGEPLTEWEQELLRGQVSSADAPATAGS 271
>gi|319948058|ref|ZP_08022232.1| 30S ribosomal protein S2 [Dietzia cinnamea P4]
gi|319438297|gb|EFV93243.1| 30S ribosomal protein S2 [Dietzia cinnamea P4]
Length=293
Score = 435 bits (1119), Expect = 4e-120, Method: Compositional matrix adjust.
Identities = 213/266 (81%), Positives = 235/266 (89%), Gaps = 4/266 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAV++MKQLLD+G HFGHQTRRWNPKM+RFIFTDRNGIYIIDLQQTLT+ID+AYEFVKET
Sbjct 1 MAVISMKQLLDAGAHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDQAYEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLFVGTKKQAQE++A EA +VGMPYVNQRWLGGMLTNF TVH+RL RLKELE+M
Sbjct 61 VAHGGTVLFVGTKKQAQEAIAEEAAKVGMPYVNQRWLGGMLTNFQTVHQRLLRLKELESM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGFEGRTKKEIL LTREKNKLER+LGG+RDM+KVPS +WVVDTNKEHIAVGEARKL
Sbjct 121 EQTGGFEGRTKKEILMLTREKNKLERTLGGMRDMSKVPSVVWVVDTNKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240
IPV+A+LDTNCDPD VDYPIP NDDAIRS +LTRVIASAVAEGL+AR+ G+A G
Sbjct 181 IPVVALLDTNCDPDVVDYPIPANDDAIRSVTVLTRVIASAVAEGLKARSQAGKATG---- 236
Query 241 EAAEPLAEWEQELLASATASATPSAT 266
E AEPLAEWE E L T A T
Sbjct 237 EEAEPLAEWETEQLDQVTGGAATEGT 262
>gi|312194962|ref|YP_004015023.1| ribosomal protein S2 [Frankia sp. EuI1c]
gi|311226298|gb|ADP79153.1| ribosomal protein S2 [Frankia sp. EuI1c]
Length=292
Score = 434 bits (1117), Expect = 6e-120, Method: Compositional matrix adjust.
Identities = 209/276 (76%), Positives = 238/276 (87%), Gaps = 1/276 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTM+QLL+SG HFGHQT+RWNPKMKR+I T+RNGIYIIDLQQTL++ID+AY+FVKET
Sbjct 1 MAVVTMRQLLESGVHFGHQTKRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAYDFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
V HGG+VLF+GTKKQAQE+V +A RVGMPYV +RWLGGMLTNFSTV+KRLQRLKELE +
Sbjct 61 VGHGGTVLFIGTKKQAQEAVEEQARRVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEI 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
E TGG E RTKKE L L+REK KLER+LGGIRDM++VPSA+WVVDT KEHIAVGEARKL
Sbjct 121 ELTGGTEVRTKKEQLVLSREKTKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKP-E 239
IPV+AILDTNCDPDEVDYPIPGNDDAIRSAALLTRV+A AVA GL +RAG AD KP +
Sbjct 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVAAGLMSRAGASAADVKPDQ 240
Query 240 AEAAEPLAEWEQELLASATASATPSATASTTALTDA 275
AAEPLAEWEQE+L +A A T A+T+A
Sbjct 241 IAAAEPLAEWEQEVLRRDAEAAPAEAAVETPAVTEA 276
>gi|284992375|ref|YP_003410929.1| 30S ribosomal protein S2 [Geodermatophilus obscurus DSM 43160]
gi|284065620|gb|ADB76558.1| ribosomal protein S2 [Geodermatophilus obscurus DSM 43160]
Length=316
Score = 433 bits (1114), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 211/259 (82%), Positives = 226/259 (88%), Gaps = 5/259 (1%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVV+MKQLLDSG HFGHQTRRWNPKMKRFIFT+RNGIYIIDLQQTL +ID AYEFVK+T
Sbjct 1 MAVVSMKQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQTLGYIDNAYEFVKQT 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGGS+LFVGTK+QAQE +A +A RVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE M
Sbjct 61 VAHGGSILFVGTKRQAQEVIAEQAQRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEDM 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTG +KKE LGLTREK KLERSLGGIRDM KVPSA+W+VDT KEHIAVGEARKL
Sbjct 121 EQTGVLVSLSKKEQLGLTREKAKLERSLGGIRDMQKVPSAVWIVDTKKEHIAVGEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQAR----AGLGRADG 236
IPV+AILDTNCDPDEVDY IPGNDDAIRSAALLTRVIA AVAEGL AR A GR DG
Sbjct 181 IPVVAILDTNCDPDEVDYKIPGNDDAIRSAALLTRVIADAVAEGLMARSASQANAGREDG 240
Query 237 KPEAEAA-EPLAEWEQELL 254
+A EPLA+WE+ELL
Sbjct 241 GQQAIGGDEPLADWERELL 259
>gi|158313013|ref|YP_001505521.1| 30S ribosomal protein S2 [Frankia sp. EAN1pec]
gi|158108418|gb|ABW10615.1| ribosomal protein S2 [Frankia sp. EAN1pec]
Length=300
Score = 432 bits (1112), Expect = 2e-119, Method: Compositional matrix adjust.
Identities = 206/256 (81%), Positives = 231/256 (91%), Gaps = 2/256 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLL+SG HFGHQT+RWNPKMKR+IFT+RNGIYIIDLQQTL++ID+AY+FVKET
Sbjct 1 MAVVTMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLF+GTKKQAQE++ +A RVGMP+V +RWLGGMLTNFSTV+KRLQRLKELE +
Sbjct 61 VAHGGTVLFIGTKKQAQEAIEEQAQRVGMPFVKERWLGGMLTNFSTVYKRLQRLKELEEI 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
E TGG E RTKKE L LTREK KLER+LGGIRDMA+VPSA+WVVDT KEHIAVGEARKLG
Sbjct 121 ELTGGTEVRTKKEQLVLTREKAKLERTLGGIRDMARVPSAVWVVDTKKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGL-GRADGKPE 239
IPV+AILDTNCDPDEVDYPIPGNDDAIRSAALLTRV+A AVAEGL +RAG A+ KPE
Sbjct 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVAEGLMSRAGASSNAEAKPE 240
Query 240 -AEAAEPLAEWEQELL 254
+ EPLAEWEQ LL
Sbjct 241 QSTGEEPLAEWEQALL 256
>gi|257055041|ref|YP_003132873.1| 30S ribosomal protein S2P [Saccharomonospora viridis DSM 43017]
gi|256584913|gb|ACU96046.1| SSU ribosomal protein S2P [Saccharomonospora viridis DSM 43017]
Length=278
Score = 431 bits (1109), Expect = 5e-119, Method: Compositional matrix adjust.
Identities = 206/277 (75%), Positives = 237/277 (86%), Gaps = 6/277 (2%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLLDSG HFGHQTRRWNPKMKR+I T+RNGIYIIDLQQTL++ID+A+EFVKET
Sbjct 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAFEFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG++LFVGTKKQAQE++A EA RVGMPYVNQRWLGGMLTNF TVHKRLQRLKELEA
Sbjct 61 VAHGGTILFVGTKKQAQEAIATEAGRVGMPYVNQRWLGGMLTNFQTVHKRLQRLKELEAQ 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
EQTGGF+G TK+EIL LTREK+KLER+LGGIRDM+KVPSA+W+VDT KEHIAV EARKL
Sbjct 121 EQTGGFQGLTKREILTLTREKDKLERTLGGIRDMSKVPSAVWIVDTKKEHIAVNEARKLN 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVI----ASAVAEGLQARAGLGRADG 236
IP++AILDTNCDPDEVDYPIPGNDDAIRSAALLT+V+ A+ + +
Sbjct 181 IPIVAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVVAEAAAAGLMARAGRNRAAAEGED 240
Query 237 KPEAEAA--EPLAEWEQELLASATASATPSATASTTA 271
KPEA AA +PL EWEQELLA + A+A+ ++ T+A
Sbjct 241 KPEAGAASDQPLPEWEQELLAGSDATASGQSSEQTSA 277
>gi|288922421|ref|ZP_06416609.1| ribosomal protein S2 [Frankia sp. EUN1f]
gi|288346224|gb|EFC80565.1| ribosomal protein S2 [Frankia sp. EUN1f]
Length=305
Score = 431 bits (1109), Expect = 5e-119, Method: Compositional matrix adjust.
Identities = 205/256 (81%), Positives = 231/256 (91%), Gaps = 2/256 (0%)
Query 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60
MAVVTMKQLL+SG HFGHQT+RWNPKMKR+IFT+RNGIYIIDLQQTL++ID+AY+FVKET
Sbjct 1 MAVVTMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKET 60
Query 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120
VAHGG+VLF+GTKKQAQE++ +A RVGMP+V +RWLGGMLTNFSTV+KRLQRLKELE +
Sbjct 61 VAHGGTVLFIGTKKQAQEAIEEQALRVGMPFVKERWLGGMLTNFSTVYKRLQRLKELEEI 120
Query 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180
E TGG E RTKKE L LTREK KLER+LGGIRDM++VPSA+WVVDT KEHIAVGEARKLG
Sbjct 121 ELTGGTEVRTKKEQLVLTREKAKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLG 180
Query 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGL-GRADGKPE 239
IPV+AILDTNCDPDEVDYPIPGNDDAIRSAALLTRV+A AVAEGL +RAG A+ KPE
Sbjct 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVAEGLMSRAGASSNAEAKPE 240
Query 240 -AEAAEPLAEWEQELL 254
+ EPLAEWEQ LL
Sbjct 241 QSTGEEPLAEWEQALL 256
Lambda K H
0.315 0.130 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 464609342096
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40