BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2891
Length=249
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610028|ref|NP_217407.1| hypothetical protein Rv2891 [Mycoba... 486 9e-136
gi|289746690|ref|ZP_06506068.1| conserved hypothetical protein [... 485 2e-135
gi|254551962|ref|ZP_05142409.1| hypothetical protein Mtube_16122... 300 2e-79
gi|289751556|ref|ZP_06510934.1| conserved hypothetical protein [... 253 1e-65
gi|167969520|ref|ZP_02551797.1| hypothetical protein MtubH3_1644... 250 1e-64
gi|240170589|ref|ZP_04749248.1| hypothetical protein MkanA1_1484... 244 1e-62
gi|254819057|ref|ZP_05224058.1| M23 peptidase domain-containing ... 237 1e-60
gi|183981831|ref|YP_001850122.1| hypothetical protein MMAR_1818 ... 230 1e-58
gi|342858259|ref|ZP_08714914.1| M23 peptidase domain-containing ... 229 2e-58
gi|118463588|ref|YP_882917.1| M23 peptidase domain-containing pr... 228 4e-58
gi|296171501|ref|ZP_06852765.1| M23 peptidase domain protein [My... 226 2e-57
gi|41409055|ref|NP_961891.1| hypothetical protein MAP2957 [Mycob... 222 4e-56
gi|336459055|gb|EGO38005.1| metalloendopeptidase-like membrane p... 218 5e-55
gi|333991252|ref|YP_004523866.1| M23 peptidase domain-containing... 214 7e-54
gi|120403199|ref|YP_953028.1| peptidase M23B [Mycobacterium vanb... 208 7e-52
gi|126434560|ref|YP_001070251.1| peptidase M23B [Mycobacterium s... 208 8e-52
gi|108798960|ref|YP_639157.1| peptidase M23B [Mycobacterium sp. ... 206 3e-51
gi|145224714|ref|YP_001135392.1| peptidase M23B [Mycobacterium g... 203 2e-50
gi|118472121|ref|YP_886855.1| peptidase M23B [Mycobacterium smeg... 199 3e-49
gi|307085600|ref|ZP_07494713.1| hypothetical protein TMLG_01381 ... 197 1e-48
gi|226306028|ref|YP_002765988.1| hypothetical protein RER_25410 ... 167 9e-40
gi|169630279|ref|YP_001703928.1| hypothetical protein MAB_3197 [... 167 1e-39
gi|229491464|ref|ZP_04385288.1| peptidase M23B [Rhodococcus eryt... 165 6e-39
gi|312139235|ref|YP_004006571.1| metallopeptidase [Rhodococcus e... 151 1e-34
gi|325673460|ref|ZP_08153151.1| M23 peptidase domain protein [Rh... 151 1e-34
gi|54026104|ref|YP_120346.1| putative peptidase [Nocardia farcin... 146 2e-33
gi|111023536|ref|YP_706508.1| hypothetical protein RHA1_ro06577 ... 144 9e-33
gi|343926723|ref|ZP_08766220.1| hypothetical protein GOALK_068_0... 144 1e-32
gi|226366020|ref|YP_002783803.1| hypothetical protein ROP_66110 ... 143 3e-32
gi|300783891|ref|YP_003764182.1| peptidase [Amycolatopsis medite... 141 7e-32
gi|262202040|ref|YP_003273248.1| peptidase M23 [Gordonia bronchi... 140 2e-31
gi|331698491|ref|YP_004334730.1| peptidase M23 [Pseudonocardia d... 138 8e-31
gi|159036849|ref|YP_001536102.1| peptidase M23B [Salinispora are... 137 1e-30
gi|296394366|ref|YP_003659250.1| peptidase M23 [Segniliparus rot... 137 2e-30
gi|145593865|ref|YP_001158162.1| peptidase M23B [Salinispora tro... 135 5e-30
gi|319948059|ref|ZP_08022233.1| peptidase M23B [Dietzia cinnamea... 133 3e-29
gi|326382898|ref|ZP_08204588.1| peptidase M23 [Gordonia neofelif... 132 3e-29
gi|296139373|ref|YP_003646616.1| peptidase M23 [Tsukamurella pau... 131 8e-29
gi|284992376|ref|YP_003410930.1| peptidase M23 [Geodermatophilus... 131 8e-29
gi|257055040|ref|YP_003132872.1| metalloendopeptidase-like membr... 129 4e-28
gi|317508415|ref|ZP_07966085.1| peptidase family M23 [Segnilipar... 129 6e-28
gi|315502443|ref|YP_004081330.1| peptidase m23 [Micromonospora s... 124 2e-26
gi|134102477|ref|YP_001108138.1| putative peptidase [Saccharopol... 121 8e-26
gi|305681011|ref|ZP_07403818.1| peptidase, M23 family [Corynebac... 120 2e-25
gi|238063315|ref|ZP_04608024.1| peptidase M23B [Micromonospora s... 119 4e-25
gi|326771761|ref|ZP_08231046.1| M23 peptidase domain protein [Ac... 118 8e-25
gi|326333661|ref|ZP_08199898.1| M23 peptidase domain protein [No... 117 1e-24
gi|225021107|ref|ZP_03710299.1| hypothetical protein CORMATOL_01... 117 1e-24
gi|302525187|ref|ZP_07277529.1| conserved hypothetical protein [... 117 2e-24
gi|317125402|ref|YP_004099514.1| peptidase M23 [Intrasporangium ... 116 3e-24
>gi|15610028|ref|NP_217407.1| hypothetical protein Rv2891 [Mycobacterium tuberculosis H37Rv]
gi|31794067|ref|NP_856560.1| hypothetical protein Mb2915 [Mycobacterium bovis AF2122/97]
gi|121638772|ref|YP_978996.1| hypothetical protein BCG_2912 [Mycobacterium bovis BCG str. Pasteur
1173P2]
42 more sequence titles
Length=249
Score = 486 bits (1252), Expect = 9e-136, Method: Compositional matrix adjust.
Identities = 248/249 (99%), Positives = 249/249 (100%), Gaps = 0/249 (0%)
Query 1 LAKSPARRCTAKVRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASP 60
+AKSPARRCTAKVRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASP
Sbjct 1 MAKSPARRCTAKVRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASP 60
Query 61 NWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRV 120
NWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRV
Sbjct 61 NWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRV 120
Query 121 GQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSSE 180
GQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSSE
Sbjct 121 GQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSSE 180
Query 181 GRTLHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFRGAAQGGDIVARQPPGRWVCPSSA 240
GRTLHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFRGAAQGGDIVARQPPGRWVCPSSA
Sbjct 181 GRTLHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFRGAAQGGDIVARQPPGRWVCPSSA 240
Query 241 GGPIGWHRQ 249
GGPIGWHRQ
Sbjct 241 GGPIGWHRQ 249
>gi|289746690|ref|ZP_06506068.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289759012|ref|ZP_06518390.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294994014|ref|ZP_06799705.1| hypothetical protein Mtub2_05748 [Mycobacterium tuberculosis
210]
gi|289687218|gb|EFD54706.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289714576|gb|EFD78588.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|326904505|gb|EGE51438.1| hypothetical protein TBPG_02412 [Mycobacterium tuberculosis W-148]
Length=249
Score = 485 bits (1249), Expect = 2e-135, Method: Compositional matrix adjust.
Identities = 247/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)
Query 1 LAKSPARRCTAKVRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASP 60
+AKSP RRCTAKVRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASP
Sbjct 1 MAKSPVRRCTAKVRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASP 60
Query 61 NWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRV 120
NWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRV
Sbjct 61 NWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRV 120
Query 121 GQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSSE 180
GQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSSE
Sbjct 121 GQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSSE 180
Query 181 GRTLHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFRGAAQGGDIVARQPPGRWVCPSSA 240
GRTLHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFRGAAQGGDIVARQPPGRWVCPSSA
Sbjct 181 GRTLHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFRGAAQGGDIVARQPPGRWVCPSSA 240
Query 241 GGPIGWHRQ 249
GGPIGWHRQ
Sbjct 241 GGPIGWHRQ 249
>gi|254551962|ref|ZP_05142409.1| hypothetical protein Mtube_16122 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=152
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/152 (99%), Positives = 152/152 (100%), Gaps = 0/152 (0%)
Query 98 VVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASG 157
+VSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASG
Sbjct 1 MVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASG 60
Query 158 ANYVDPLGLLKSTPIRLKPLSSEGRTLHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFR 217
ANYVDPLGLLKSTPIRLKPLSSEGRTLHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFR
Sbjct 61 ANYVDPLGLLKSTPIRLKPLSSEGRTLHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFR 120
Query 218 GAAQGGDIVARQPPGRWVCPSSAGGPIGWHRQ 249
GAAQGGDIVARQPPGRWVCPSSAGGPIGWHRQ
Sbjct 121 GAAQGGDIVARQPPGRWVCPSSAGGPIGWHRQ 152
>gi|289751556|ref|ZP_06510934.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289692143|gb|EFD59572.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=155
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/132 (99%), Positives = 132/132 (100%), Gaps = 0/132 (0%)
Query 13 VRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLA 72
+RRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLA
Sbjct 1 MRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLA 60
Query 73 GRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGA 132
GRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGA
Sbjct 61 GRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGA 120
Query 133 LAAGHPGCQAAA 144
LAAGHPGCQAAA
Sbjct 121 LAAGHPGCQAAA 132
>gi|167969520|ref|ZP_02551797.1| hypothetical protein MtubH3_16446 [Mycobacterium tuberculosis
H37Ra]
Length=126
Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/126 (99%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 124 VSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSSEGRT 183
+SAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSSEGRT
Sbjct 1 MSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSSEGRT 60
Query 184 LHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFRGAAQGGDIVARQPPGRWVCPSSAGGP 243
LHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFRGAAQGGDIVARQPPGRWVCPSSAGGP
Sbjct 61 LHYRQAEPVFVNEAAAGALAGAGHRKSPKQGVFRGAAQGGDIVARQPPGRWVCPSSAGGP 120
Query 244 IGWHRQ 249
IGWHRQ
Sbjct 121 IGWHRQ 126
>gi|240170589|ref|ZP_04749248.1| hypothetical protein MkanA1_14845 [Mycobacterium kansasii ATCC
12478]
Length=163
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/162 (77%), Positives = 136/162 (84%), Gaps = 0/162 (0%)
Query 17 LSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPG 76
+ R LILCW+L A+PA ADD RL WPLRP PAVVR +DA +PNW+PGHRGVDLA PG
Sbjct 1 MRRLALILCWTLASASPAVADDFRLQWPLRPAPAVVRGYDAPAPNWHPGHRGVDLAAAPG 60
Query 77 QPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAG 136
QPVYA GSATVVFAGLLAGRPVVSLAHPGGL TSYEPV A VR GQ V+A TV+G + AG
Sbjct 61 QPVYAPGSATVVFAGLLAGRPVVSLAHPGGLHTSYEPVHATVRAGQLVTAQTVLGTVLAG 120
Query 137 HPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLS 178
HPGC ACLHWGAMWGPAS A+YVDPLGL+KSTPIRLKPL+
Sbjct 121 HPGCTGQACLHWGAMWGPASRADYVDPLGLVKSTPIRLKPLT 162
>gi|254819057|ref|ZP_05224058.1| M23 peptidase domain-containing protein [Mycobacterium intracellulare
ATCC 13950]
Length=168
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/165 (76%), Positives = 134/165 (82%), Gaps = 0/165 (0%)
Query 22 LILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYA 81
L L +L+ A PA ADD RL WPLRPPPAV R FDA +W+PGHRGVDLAG GQPVYA
Sbjct 3 LTLGAALVSAVPAAADDDRLDWPLRPPPAVTRAFDAPVQDWHPGHRGVDLAGAAGQPVYA 62
Query 82 AGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQ 141
AG+ATVVFAGLLAGRPVVSLAHPGG RTSYEPV A VR GQ V+A TVIG L AGHPGC+
Sbjct 63 AGAATVVFAGLLAGRPVVSLAHPGGSRTSYEPVRAAVRAGQSVAAGTVIGTLMAGHPGCR 122
Query 142 AAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSSEGRTLHY 186
AACLHWGAMWGPASGA+YVDPLGLL+STPIRLKPL G +
Sbjct 123 VAACLHWGAMWGPASGAHYVDPLGLLRSTPIRLKPLRPPGDAAQH 167
>gi|183981831|ref|YP_001850122.1| hypothetical protein MMAR_1818 [Mycobacterium marinum M]
gi|183175157|gb|ACC40267.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=168
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/156 (74%), Positives = 130/156 (84%), Gaps = 0/156 (0%)
Query 23 ILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAA 82
+ WSLLGAA AHADD+RL WPLRPP V+R FDA +PNW PGHRGVDLAG PG+P++AA
Sbjct 12 LAAWSLLGAAAAHADDTRLQWPLRPPAVVLRGFDAPTPNWRPGHRGVDLAGVPGEPIFAA 71
Query 83 GSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQA 142
G ATVV+AG LA PVVSLAHPGGLRTSY+PV VR GQ V+A + +G L AGHPGC A
Sbjct 72 GDATVVYAGTLADWPVVSLAHPGGLRTSYQPVRPTVRAGQHVTAGSAVGTLVAGHPGCPA 131
Query 143 AACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLS 178
ACLHWGAMWGPAS A+YVDPLGLLKSTPIRLKP++
Sbjct 132 KACLHWGAMWGPASDAHYVDPLGLLKSTPIRLKPVT 167
>gi|342858259|ref|ZP_08714914.1| M23 peptidase domain-containing protein [Mycobacterium colombiense
CECT 3035]
gi|342133963|gb|EGT87143.1| M23 peptidase domain-containing protein [Mycobacterium colombiense
CECT 3035]
Length=163
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/159 (75%), Positives = 129/159 (82%), Gaps = 0/159 (0%)
Query 20 SVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPV 79
+ L+LC L+ A PA A RL WPLRPPPAV R FDA SP+WNPGHRGVDLAG GQPV
Sbjct 4 TALLLCAGLVSAVPAGAAADRLDWPLRPPPAVARGFDAPSPDWNPGHRGVDLAGAAGQPV 63
Query 80 YAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPG 139
YAAG+ TVVFAG+LAGRPVVSLAHPGGL TSYEPV A VR GQ V+A TV+G L GH G
Sbjct 64 YAAGAGTVVFAGVLAGRPVVSLAHPGGLHTSYEPVRAAVRAGQRVTAATVLGELMPGHAG 123
Query 140 CQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLS 178
C AACLHWGAMWGPASGA YVDPLGLL STP+RLKPL+
Sbjct 124 CPGAACLHWGAMWGPASGARYVDPLGLLSSTPVRLKPLN 162
>gi|118463588|ref|YP_882917.1| M23 peptidase domain-containing protein [Mycobacterium avium
104]
gi|254776173|ref|ZP_05217689.1| M23 peptidase domain-containing protein [Mycobacterium avium
subsp. avium ATCC 25291]
gi|118164875|gb|ABK65772.1| M23 peptidase domain protein [Mycobacterium avium 104]
Length=167
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/162 (75%), Positives = 134/162 (83%), Gaps = 4/162 (2%)
Query 20 SVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPV 79
+ L+L L+GA PA A D RL WPLRPPP VVR FDA + +W+PGHRGVDLAG GQPV
Sbjct 4 AALMLVVGLVGAVPAAAGDLRLEWPLRPPPVVVRAFDAPAQDWHPGHRGVDLAGTAGQPV 63
Query 80 YAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPG 139
YAAG+ TVVFAGLLAGRPVVS+AHPGGLRTSYEPV A VRVGQPV+A TV+G L GHPG
Sbjct 64 YAAGAGTVVFAGLLAGRPVVSVAHPGGLRTSYEPVRAVVRVGQPVTAQTVLGELLPGHPG 123
Query 140 CQAA----ACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPL 177
C+A+ ACLHWGAMWGPASGA YVDPLGL+ STPIRLKPL
Sbjct 124 CRASPAGGACLHWGAMWGPASGARYVDPLGLVASTPIRLKPL 165
>gi|296171501|ref|ZP_06852765.1| M23 peptidase domain protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894063|gb|EFG73824.1| M23 peptidase domain protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=166
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/147 (80%), Positives = 126/147 (86%), Gaps = 4/147 (2%)
Query 37 DDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGR 96
DD RL WPLRPPPA+ R FDA SP+W+PGHRGVDL G PGQPVYA G ATVVFAG LAGR
Sbjct 20 DDVRLEWPLRPPPAIARGFDAPSPDWHPGHRGVDLRGSPGQPVYAPGDATVVFAGELAGR 79
Query 97 PVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAA----ACLHWGAMW 152
PVVSLAHPGGLRTSYEPV A VRVGQPV+A TVIG+L AGH GC+A+ ACLHWGAMW
Sbjct 80 PVVSLAHPGGLRTSYEPVRAAVRVGQPVTARTVIGSLEAGHAGCRASGAGGACLHWGAMW 139
Query 153 GPASGANYVDPLGLLKSTPIRLKPLSS 179
GPASGA+YVDPLGL+KSTPIRLKPL
Sbjct 140 GPASGAHYVDPLGLVKSTPIRLKPLHE 166
>gi|41409055|ref|NP_961891.1| hypothetical protein MAP2957 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397414|gb|AAS05274.1| hypothetical protein MAP_2957 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=167
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/162 (73%), Positives = 133/162 (83%), Gaps = 4/162 (2%)
Query 20 SVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPV 79
+ L+L L+GA PA A D L WPLRPPP VVR F+A + +W+PGHRGVDLAG GQPV
Sbjct 4 AALMLVVGLVGAVPAAAGDLHLEWPLRPPPVVVRAFEAPAQDWHPGHRGVDLAGTAGQPV 63
Query 80 YAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPG 139
YAAG+ TVVFAGLLAGRPVVS+AHPGGLRTSYEPV A VRVGQPV+A TV+G L GHPG
Sbjct 64 YAAGAGTVVFAGLLAGRPVVSVAHPGGLRTSYEPVRAVVRVGQPVTAQTVLGELRPGHPG 123
Query 140 CQAA----ACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPL 177
C+A+ ACLHWGA+WGPASGA Y+DPLGL+ STPIRLKPL
Sbjct 124 CRASPAGGACLHWGALWGPASGARYLDPLGLVASTPIRLKPL 165
>gi|336459055|gb|EGO38005.1| metalloendopeptidase-like membrane protein [Mycobacterium avium
subsp. paratuberculosis S397]
Length=161
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/159 (73%), Positives = 130/159 (82%), Gaps = 4/159 (2%)
Query 23 ILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAA 82
+L L+GA PA A D L WPLRPPP VVR F+A + +W+PGHRGVDLAG GQPVYAA
Sbjct 1 MLVVGLVGAVPAAAGDLHLEWPLRPPPVVVRAFEAPAQDWHPGHRGVDLAGTAGQPVYAA 60
Query 83 GSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQA 142
G+ TVVFAGLLAGRPVVS+AHPGGLRTSYEPV A VRVGQPV+A TV+G L GHPGC+A
Sbjct 61 GAGTVVFAGLLAGRPVVSVAHPGGLRTSYEPVRAVVRVGQPVTAQTVLGELRPGHPGCRA 120
Query 143 A----ACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPL 177
+ ACLHWGA+WGPASGA Y+DPLGL+ S PIRLKPL
Sbjct 121 SPAGGACLHWGALWGPASGARYLDPLGLVASIPIRLKPL 159
>gi|333991252|ref|YP_004523866.1| M23 peptidase domain-containing protein [Mycobacterium sp. JDM601]
gi|333487220|gb|AEF36612.1| M23 peptidase domain-containing protein [Mycobacterium sp. JDM601]
Length=164
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 114/161 (71%), Positives = 125/161 (78%), Gaps = 0/161 (0%)
Query 17 LSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPG 76
+ + L L S+L AAPAHA+ RL WPLRP PAVVR FDA P+W GHRGVDLAG G
Sbjct 1 MRFTALFLVASVLAAAPAHAERFRLDWPLRPRPAVVRGFDAPRPDWQRGHRGVDLAGAGG 60
Query 77 QPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAG 136
+PVYAAG ATV+FAG G PVVSLAHPGGLRTSYEPV A VR GQ V+A +VIG L G
Sbjct 61 RPVYAAGVATVIFAGRAGGVPVVSLAHPGGLRTSYEPVAATVRAGQQVAAGSVIGTLEPG 120
Query 137 HPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPL 177
HPGC A ACLHWGAMWGPAS A+YVDPLGLL TPIRLKP+
Sbjct 121 HPGCPAPACLHWGAMWGPASRADYVDPLGLLVGTPIRLKPV 161
>gi|120403199|ref|YP_953028.1| peptidase M23B [Mycobacterium vanbaalenii PYR-1]
gi|119956017|gb|ABM13022.1| peptidase M23B [Mycobacterium vanbaalenii PYR-1]
Length=162
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/141 (75%), Positives = 115/141 (82%), Gaps = 0/141 (0%)
Query 37 DDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGR 96
DD RLGWPL+P P VVRQFDA +PNW GHRGVDLAG GQPVYAA + TVVFAG LAGR
Sbjct 21 DDVRLGWPLKPSPTVVRQFDAPAPNWQRGHRGVDLAGADGQPVYAAAAGTVVFAGDLAGR 80
Query 97 PVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPAS 156
P+VS+AHPGGLRT+YEPV VR GQ V+A T +G LA GHP C A ACLHWGAMWGPAS
Sbjct 81 PLVSIAHPGGLRTTYEPVRPAVRRGQQVTAGTALGELATGHPNCAAPACLHWGAMWGPAS 140
Query 157 GANYVDPLGLLKSTPIRLKPL 177
A+YVDPLGLL +T IRLKPL
Sbjct 141 RADYVDPLGLLGTTAIRLKPL 161
>gi|126434560|ref|YP_001070251.1| peptidase M23B [Mycobacterium sp. JLS]
gi|126234360|gb|ABN97760.1| peptidase M23B [Mycobacterium sp. JLS]
Length=161
Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/156 (70%), Positives = 123/156 (79%), Gaps = 1/156 (0%)
Query 22 LILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYA 81
+++ S+ AAP A+D RL WPLRP PAVVR FDA +PNW GHRGVDLA PGQPVYA
Sbjct 6 VLVAISVAVAAPVRAED-RLDWPLRPRPAVVRTFDAPTPNWQRGHRGVDLAATPGQPVYA 64
Query 82 AGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQ 141
A S TVVFAG LAGRP+VS+AHPGGLRTSYEPV VR GQ V A V+G + AGH GC
Sbjct 65 AQSGTVVFAGELAGRPLVSVAHPGGLRTSYEPVRPSVRAGQTVRAGAVLGEVLAGHHGCA 124
Query 142 AAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPL 177
A ACLHWGAMWGPAS A+YVDPLGLL++TP+RL PL
Sbjct 125 ADACLHWGAMWGPASRADYVDPLGLLETTPVRLLPL 160
>gi|108798960|ref|YP_639157.1| peptidase M23B [Mycobacterium sp. MCS]
gi|119868075|ref|YP_938027.1| peptidase M23B [Mycobacterium sp. KMS]
gi|108769379|gb|ABG08101.1| peptidase M23B [Mycobacterium sp. MCS]
gi|119694164|gb|ABL91237.1| peptidase M23B [Mycobacterium sp. KMS]
Length=161
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/156 (70%), Positives = 122/156 (79%), Gaps = 1/156 (0%)
Query 22 LILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYA 81
+++ S+ AAP A+D RL WPLRP PAVVR FDA +PNW GHRGVDLA PGQPVYA
Sbjct 6 VLVAISVAVAAPVRAED-RLDWPLRPRPAVVRTFDAPAPNWQRGHRGVDLAATPGQPVYA 64
Query 82 AGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQ 141
A S TVVFAG LAGRP+VS+AHPGGLRTSYEPV VR GQ V A V+G + AGH GC
Sbjct 65 AQSGTVVFAGELAGRPLVSVAHPGGLRTSYEPVRPSVRAGQTVRAGAVLGEVLAGHHGCA 124
Query 142 AAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPL 177
ACLHWGAMWGPAS A+YVDPLGLL++TP+RL PL
Sbjct 125 GDACLHWGAMWGPASRADYVDPLGLLETTPVRLLPL 160
>gi|145224714|ref|YP_001135392.1| peptidase M23B [Mycobacterium gilvum PYR-GCK]
gi|315445044|ref|YP_004077923.1| metalloendopeptidase-like membrane protein [Mycobacterium sp.
Spyr1]
gi|145217200|gb|ABP46604.1| peptidase M23B [Mycobacterium gilvum PYR-GCK]
gi|315263347|gb|ADU00089.1| metalloendopeptidase-like membrane protein [Mycobacterium sp.
Spyr1]
Length=162
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/159 (67%), Positives = 121/159 (77%), Gaps = 2/159 (1%)
Query 21 VLILCWSLLG--AAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQP 78
VL+L +L+ APA ADD RL WP+RP PAVVR FDA +PNW GHRGVDL G GQ
Sbjct 3 VLVLVATLVAICTAPAEADDGRLEWPMRPRPAVVRAFDAPAPNWQRGHRGVDLGGAEGQV 62
Query 79 VYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHP 138
+ AA S TVVFAG LAGRP++S+AHPGGLRT+YEPV VR GQ VS T +G L AGHP
Sbjct 63 IQAAASGTVVFAGELAGRPLISVAHPGGLRTTYEPVSPVVRRGQVVSTGTALGHLVAGHP 122
Query 139 GCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPL 177
GC AAACLHWGAMWGP+S A+YVDP GL+ + +RLKPL
Sbjct 123 GCAAAACLHWGAMWGPSSRADYVDPTGLVVTVTVRLKPL 161
>gi|118472121|ref|YP_886855.1| peptidase M23B [Mycobacterium smegmatis str. MC2 155]
gi|118173408|gb|ABK74304.1| peptidase M23B [Mycobacterium smegmatis str. MC2 155]
Length=172
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/168 (65%), Positives = 122/168 (73%), Gaps = 5/168 (2%)
Query 12 KVRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDL 71
KV R+++ ++C L A PA A+ R WPL P PAV R FDA SPNW GHRGVDL
Sbjct 4 KVMRIMA---AVVCAGLFWAVPADAETVRFRWPLDPRPAVTRAFDAPSPNWQRGHRGVDL 60
Query 72 AGRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIG 131
A QPVYAAG TVVFAG LAGRPVVS+AHPGGLRT+YEPV A VRVG+ V+A IG
Sbjct 61 AAGAHQPVYAAGPGTVVFAGELAGRPVVSIAHPGGLRTTYEPVRAHVRVGRTVAAGQSIG 120
Query 132 ALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSS 179
L GH GC AACLHWGAMWGPAS A+YVDPLGLL + +RLKPL +
Sbjct 121 TLDEGHSGCPVAACLHWGAMWGPASRADYVDPLGLLAA--VRLKPLQT 166
>gi|307085600|ref|ZP_07494713.1| hypothetical protein TMLG_01381 [Mycobacterium tuberculosis SUMu012]
gi|308364907|gb|EFP53758.1| hypothetical protein TMLG_01381 [Mycobacterium tuberculosis SUMu012]
Length=101
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/101 (99%), Positives = 101/101 (100%), Gaps = 0/101 (0%)
Query 1 LAKSPARRCTAKVRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASP 60
+AKSPARRCTAKVRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASP
Sbjct 1 MAKSPARRCTAKVRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASP 60
Query 61 NWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSL 101
NWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSL
Sbjct 61 NWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSL 101
>gi|226306028|ref|YP_002765988.1| hypothetical protein RER_25410 [Rhodococcus erythropolis PR4]
gi|226185145|dbj|BAH33249.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=166
Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/157 (57%), Positives = 104/157 (67%), Gaps = 7/157 (4%)
Query 22 LILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYA 81
+I C +G A A D+R WPL P P V R FD + NW PGHRGVDL G GQ V A
Sbjct 15 VISCCVAVGTASA---DARFDWPLAPRPHVERAFDKPAKNWLPGHRGVDLGGSAGQSVLA 71
Query 82 AGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQ 141
AG VVFAG++AGRP VS+ H GGLRT+YEPVVA VR G+ V+A +VIG L GH GC
Sbjct 72 AGDGIVVFAGVVAGRPTVSIDHSGGLRTTYEPVVAVVRAGERVAARSVIGTLETGHEGCA 131
Query 142 AAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLS 178
ACLHWG G Y+DPLGL+++ P+RLKPL
Sbjct 132 VEACLHWGLR----RGREYLDPLGLVRTQPLRLKPLK 164
>gi|169630279|ref|YP_001703928.1| hypothetical protein MAB_3197 [Mycobacterium abscessus ATCC 19977]
gi|169242246|emb|CAM63274.1| Conserved hypothetical protein (putative peptidase) [Mycobacterium
abscessus]
Length=209
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/161 (61%), Positives = 112/161 (70%), Gaps = 6/161 (3%)
Query 22 LILCWSLLGA-----APAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPG 76
LIL ++ G+ APA D R GWPL P PAV+RQFD WN GHRGVDLAG P
Sbjct 50 LILALAVAGSPMAATAPADTGD-RFGWPLSPRPAVIRQFDNPQQRWNRGHRGVDLAGGPD 108
Query 77 QPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAG 136
Q V AAG VVFAG+LAGRP+VS+ H GGLRT+YEPV VR GQ V VIG L G
Sbjct 109 QAVVAAGPGVVVFAGVLAGRPLVSIEHHGGLRTTYEPVTPVVRPGQRVDEGAVIGLLQRG 168
Query 137 HPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPL 177
HPGC ACLHWGA+ GPAS A+Y++PLGLL + P+RLKPL
Sbjct 169 HPGCAMTACLHWGALRGPASSAHYLNPLGLLAAIPLRLKPL 209
>gi|229491464|ref|ZP_04385288.1| peptidase M23B [Rhodococcus erythropolis SK121]
gi|229321749|gb|EEN87546.1| peptidase M23B [Rhodococcus erythropolis SK121]
Length=156
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/141 (59%), Positives = 96/141 (69%), Gaps = 4/141 (2%)
Query 38 DSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRP 97
D+R WPL P P V R FD + NW PGHRGVDL G GQ V AAG VVFAG++AG+P
Sbjct 18 DTRFDWPLAPRPHVERAFDKPAENWLPGHRGVDLGGSAGQSVLAAGDGIVVFAGVVAGKP 77
Query 98 VVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASG 157
VS+ H GGLRT+YEPV A VR G+ V+A +VIG L GH GC ACLHWG G
Sbjct 78 TVSIDHSGGLRTTYEPVTAVVRTGERVAARSVIGTLETGHEGCAVEACLHWGLR----RG 133
Query 158 ANYVDPLGLLKSTPIRLKPLS 178
Y+DPLGL++S P+RLKPL
Sbjct 134 REYLDPLGLVRSQPLRLKPLK 154
>gi|312139235|ref|YP_004006571.1| metallopeptidase [Rhodococcus equi 103S]
gi|311888574|emb|CBH47886.1| putative secreted metallopeptidase [Rhodococcus equi 103S]
Length=197
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/154 (56%), Positives = 99/154 (65%), Gaps = 7/154 (4%)
Query 34 AHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLL 93
A + GWPLRP P VVR FD NW PGHRGVDLA PGQ V AAG+ TVVFAG +
Sbjct 50 ATTNRQPFGWPLRPRPPVVRPFDLPERNWLPGHRGVDLAAAPGQTVLAAGAGTVVFAGTV 109
Query 94 AGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWG 153
AG+PVVS+ HPGGLRT+YEPV A V G+ V TV+G +A GHP C AAACLHWG
Sbjct 110 AGKPVVSVDHPGGLRTTYEPVEATVSAGRRVERGTVLGTVAPGHPECAAAACLHWGLR-- 167
Query 154 PASGANYVDPLGLLKSTPIRLKPLSSEGRTLHYR 187
Y+DPL L+ + +RL P G T H R
Sbjct 168 --RDREYLDPLPLVGAVRMRLLP---SGGTDHAR 196
>gi|325673460|ref|ZP_08153151.1| M23 peptidase domain protein [Rhodococcus equi ATCC 33707]
gi|325555481|gb|EGD25152.1| M23 peptidase domain protein [Rhodococcus equi ATCC 33707]
Length=197
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/147 (58%), Positives = 98/147 (67%), Gaps = 7/147 (4%)
Query 41 LGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVS 100
GWPLRP P VVR FD + NW PGHRGVDLA PGQ V AAG+ TVVFAG +AG+PVVS
Sbjct 57 FGWPLRPRPPVVRPFDLPARNWLPGHRGVDLAAVPGQTVLAAGAGTVVFAGTVAGKPVVS 116
Query 101 LAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANY 160
+ HPGGLRT+YEPV A V G+ V TV+G +A GHP C AAACLHWG Y
Sbjct 117 VDHPGGLRTTYEPVEATVSAGRRVERGTVLGTVAPGHPECAAAACLHWGLR----RDREY 172
Query 161 VDPLGLLKSTPIRLKPLSSEGRTLHYR 187
+DPL L+ + +RL P G T H R
Sbjct 173 LDPLPLVGAVRMRLLP---SGGTDHAR 196
>gi|54026104|ref|YP_120346.1| putative peptidase [Nocardia farcinica IFM 10152]
gi|54017612|dbj|BAD58982.1| putative peptidase [Nocardia farcinica IFM 10152]
Length=198
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/127 (61%), Positives = 88/127 (70%), Gaps = 2/127 (1%)
Query 41 LGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVS 100
GWPLRP P + R+FD +W PGHRGVDLAG PGQPV AAG VVFAG +AG+ VVS
Sbjct 53 FGWPLRPRPRIERRFDKPERDWLPGHRGVDLAGMPGQPVLAAGDGIVVFAGTVAGKRVVS 112
Query 101 LAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMW--GPASGA 158
+ HPGGLRT+YEPV V VG+ V+ TV+G L AGHPGC A ACLHWG G
Sbjct 113 VDHPGGLRTTYEPVQPAVTVGRRVTRGTVLGTLEAGHPGCHAPACLHWGLRREAGRRGRP 172
Query 159 NYVDPLG 165
Y+DPLG
Sbjct 173 EYLDPLG 179
>gi|111023536|ref|YP_706508.1| hypothetical protein RHA1_ro06577 [Rhodococcus jostii RHA1]
gi|110823066|gb|ABG98350.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=254
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/166 (49%), Positives = 99/166 (60%), Gaps = 6/166 (3%)
Query 13 VRRVLSRSVLILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLA 72
+ R L+ S L+ +L A WPL P P VVR FD +W PGHRGVDL
Sbjct 7 IVRALTASTLLTAAALFAPPADAAPTGEFDWPLHPRPRVVRAFDNPERDWLPGHRGVDLG 66
Query 73 GRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGA 132
G P + V +AG+ VVFAG +AG+PVVS+ HPGGLRT+YEPV A+V GQ V TV+G
Sbjct 67 GVPDEAVLSAGTGVVVFAGTVAGKPVVSVDHPGGLRTTYEPVTARVTPGQRVGRGTVLGT 126
Query 133 LAAGHPGC--QAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKP 176
L GHP C AACLHWG Y+DPLGL++ P+R P
Sbjct 127 LEPGHPRCITLVAACLHWGLR----RDREYLDPLGLVRVAPVRRYP 168
>gi|343926723|ref|ZP_08766220.1| hypothetical protein GOALK_068_00040 [Gordonia alkanivorans NBRC
16433]
gi|343763322|dbj|GAA13146.1| hypothetical protein GOALK_068_00040 [Gordonia alkanivorans NBRC
16433]
Length=174
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/136 (58%), Positives = 88/136 (65%), Gaps = 0/136 (0%)
Query 44 PLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLAH 103
PL P P VV FDA W PGHRGVDLA PG V AG+ V FAG +AGRPVVS+ H
Sbjct 36 PLPPRPTVVTGFDAPEKRWQPGHRGVDLAAVPGVAVSTAGAGRVRFAGRVAGRPVVSVQH 95
Query 104 PGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDP 163
P GL T+YEPV A V G PVS IG L AGHPGC CLHWGA G A Y++P
Sbjct 96 PDGLITTYEPVEATVGEGDPVSRGDTIGTLVAGHPGCPTLTCLHWGARRGVGRDAEYLNP 155
Query 164 LGLLKSTPIRLKPLSS 179
LGLL + +RLKPL++
Sbjct 156 LGLLGAVRVRLKPLNA 171
>gi|226366020|ref|YP_002783803.1| hypothetical protein ROP_66110 [Rhodococcus opacus B4]
gi|226244510|dbj|BAH54858.1| hypothetical protein [Rhodococcus opacus B4]
Length=200
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/139 (55%), Positives = 93/139 (67%), Gaps = 6/139 (4%)
Query 41 LGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVS 100
WPL P P VVR FD +W PGHRGVDL G P + V +AG+ VVFAG +AG+PVVS
Sbjct 64 FDWPLHPRPRVVRAFDNPEHDWLPGHRGVDLGGVPDEAVLSAGAGVVVFAGTVAGKPVVS 123
Query 101 LAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQA--AACLHWGAMWGPASGA 158
+ HPGGLRT+YEPV A+V G V TV+G L GHPGC AACLHWG
Sbjct 124 VDHPGGLRTTYEPVTARVAPGLRVGRGTVLGTLEPGHPGCITPVAACLHWGLR----RDR 179
Query 159 NYVDPLGLLKSTPIRLKPL 177
+Y+DPLGL++ P+RL+P+
Sbjct 180 DYLDPLGLVRVAPVRLEPV 198
>gi|300783891|ref|YP_003764182.1| peptidase [Amycolatopsis mediterranei U32]
gi|299793405|gb|ADJ43780.1| putative peptidase [Amycolatopsis mediterranei U32]
gi|340525286|gb|AEK40491.1| peptidase [Amycolatopsis mediterranei S699]
Length=211
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/138 (55%), Positives = 89/138 (65%), Gaps = 5/138 (3%)
Query 40 RLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVV 99
RL WPL P P +++ FDA + PGHRGVDLA PGQ V AA + VVFAG + GRPV+
Sbjct 73 RLSWPLSPVPVIIKYFDAPDTPFGPGHRGVDLAAAPGQDVLAADAGVVVFAGSVGGRPVL 132
Query 100 SLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGAN 159
S+ H GGLRT+YEPVV +V VG+ V V+G + AGHPGC AACLHWG G
Sbjct 133 SVDHDGGLRTTYEPVVPKVAVGEQVYRGQVLGTVLAGHPGCTVAACLHWGVR----RGEE 188
Query 160 YVDPLGLLKST-PIRLKP 176
Y+DPL L RLKP
Sbjct 189 YIDPLALTGEVGEYRLKP 206
>gi|262202040|ref|YP_003273248.1| peptidase M23 [Gordonia bronchialis DSM 43247]
gi|262085387|gb|ACY21355.1| Peptidase M23 [Gordonia bronchialis DSM 43247]
Length=174
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/165 (50%), Positives = 95/165 (58%), Gaps = 7/165 (4%)
Query 22 LILCWSLLGAAPA-------HADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGR 74
L++ +LL A PA A R PL P P VVR F+ W PGHRGVDLAG
Sbjct 8 LLITVALLWAVPAVVMAPVAMATAERYSVPLAPRPTVVRAFENPERRWQPGHRGVDLAGG 67
Query 75 PGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALA 134
PG V AAGS TV FAG +AGR VVS+ H G+ T+YEPV V G V IG L
Sbjct 68 PGVAVLAAGSGTVRFAGDVAGRTVVSIQHADGVITTYEPVRPTVADGDHVRRGQRIGTLV 127
Query 135 AGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLSS 179
GHPGC A CLHWGA G A Y+DPLGL+ + +RLKP+
Sbjct 128 TGHPGCPVATCLHWGARVGAGRSARYLDPLGLIGAVRVRLKPIDE 172
>gi|331698491|ref|YP_004334730.1| peptidase M23 [Pseudonocardia dioxanivorans CB1190]
gi|326953180|gb|AEA26877.1| Peptidase M23 [Pseudonocardia dioxanivorans CB1190]
Length=245
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/144 (55%), Positives = 92/144 (64%), Gaps = 3/144 (2%)
Query 39 SRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPV 98
+R GWPLRP P + ++F A W+PGHRGVDL G PGQ V AA V FAG LAGR V
Sbjct 103 ARYGWPLRPVPRIGQRFRAPPNPWSPGHRGVDLVGVPGQEVRAARDGVVAFAGPLAGRGV 162
Query 99 VSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGA 158
VS+ HP GLRT+YEPV A V VG VS V+G L GHPGC A CLHWG G A
Sbjct 163 VSVLHPDGLRTTYEPVTATVAVGTVVSRGAVLGTLEPGHPGCPATTCLHWGVRRG---DA 219
Query 159 NYVDPLGLLKSTPIRLKPLSSEGR 182
+Y+DPL L+ + +RL P +G
Sbjct 220 DYLDPLVLVGAGRVRLLPDPGDGE 243
>gi|159036849|ref|YP_001536102.1| peptidase M23B [Salinispora arenicola CNS-205]
gi|157915684|gb|ABV97111.1| peptidase M23B [Salinispora arenicola CNS-205]
Length=214
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/140 (55%), Positives = 89/140 (64%), Gaps = 4/140 (2%)
Query 43 WPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLA 102
WPL P++ R+FD W GHRGVDLA PG PV AAG+ V FAG +AGRPVV++
Sbjct 79 WPLPGTPSIARRFDPPPQPWLSGHRGVDLAAAPGVPVSAAGAGVVTFAGTVAGRPVVTVG 138
Query 103 HPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVD 162
H GLRT+YEPV++ VG PVSA +IG L GH GC A ACLHWG G Y+D
Sbjct 139 HADGLRTTYEPVLSGAEVGSPVSAGALIGHLLGGHRGCAAPACLHWGLR----RGDTYLD 194
Query 163 PLGLLKSTPIRLKPLSSEGR 182
PL LL P+RL PL E R
Sbjct 195 PLALLGRGPVRLLPLDGELR 214
>gi|296394366|ref|YP_003659250.1| peptidase M23 [Segniliparus rotundus DSM 44985]
gi|296181513|gb|ADG98419.1| Peptidase M23 [Segniliparus rotundus DSM 44985]
Length=286
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/136 (54%), Positives = 85/136 (63%), Gaps = 0/136 (0%)
Query 43 WPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLA 102
WPL P P VV +FD W GHRGVDLA G V +AG TVVFAG ++G V+++
Sbjct 35 WPLSPKPRVVTKFDPPGQRWGSGHRGVDLAAAAGAVVRSAGRGTVVFAGSVSGIGVIAVE 94
Query 103 HPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVD 162
HP G RT+YEPV VR G V+A IG L+AGHPGC AAACLHWG G Y D
Sbjct 95 HPSGFRTTYEPVEPTVRAGDLVAAGEPIGRLSAGHPGCPAAACLHWGLKRGHGRQDRYDD 154
Query 163 PLGLLKSTPIRLKPLS 178
PL L+ PIRLKP+
Sbjct 155 PLVLVAVLPIRLKPMD 170
>gi|145593865|ref|YP_001158162.1| peptidase M23B [Salinispora tropica CNB-440]
gi|145303202|gb|ABP53784.1| peptidase M23B [Salinispora tropica CNB-440]
Length=164
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/140 (56%), Positives = 86/140 (62%), Gaps = 4/140 (2%)
Query 43 WPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLA 102
WPL P VVR+FD W PGHRGVDLA G PV +AG V FAG +AGRPVV++
Sbjct 29 WPLPGEPPVVRRFDPPPQPWLPGHRGVDLAAGAGTPVLSAGDGVVTFAGAVAGRPVVTVG 88
Query 103 HPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVD 162
H GLRT+YEPV V VG PV A IG L AGHPGC A ACLHWG G Y+D
Sbjct 89 HANGLRTTYEPVHPVVEVGTPVLAGVPIGRLRAGHPGCAAPACLHWGLR----RGDTYLD 144
Query 163 PLGLLKSTPIRLKPLSSEGR 182
PL LL P+RL PL R
Sbjct 145 PLALLGRGPVRLLPLDGALR 164
>gi|319948059|ref|ZP_08022233.1| peptidase M23B [Dietzia cinnamea P4]
gi|319438298|gb|EFV93244.1| peptidase M23B [Dietzia cinnamea P4]
Length=215
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/139 (57%), Positives = 91/139 (66%), Gaps = 6/139 (4%)
Query 44 PLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLAH 103
P+ P +VV FD + W PGHRGVDLA P PV + TV FAG +AGRPVVS+ H
Sbjct 69 PVPGPLSVVTPFDPPARRWLPGHRGVDLAAEPYSPVLSPADGTVSFAGAVAGRPVVSIDH 128
Query 104 PGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWG---AMWGPA-SGAN 159
GGLRT+YEPV A+VR G V+A IG L AGHPGC ACLHWG A GP+ +
Sbjct 129 GGGLRTTYEPVAAEVRAGDVVAAGARIGRLLAGHPGCPVVACLHWGARVASGGPSGDDDD 188
Query 160 YVDPLGLLKST--PIRLKP 176
YVDPL LL +T PIRLKP
Sbjct 189 YVDPLALLAATHRPIRLKP 207
>gi|326382898|ref|ZP_08204588.1| peptidase M23 [Gordonia neofelifaecis NRRL B-59395]
gi|326198488|gb|EGD55672.1| peptidase M23 [Gordonia neofelifaecis NRRL B-59395]
Length=177
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/145 (52%), Positives = 94/145 (65%), Gaps = 0/145 (0%)
Query 39 SRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPV 98
+R WPL+P P+V R+FD + W GHRGVDLA PG V AA + TV FAG + R V
Sbjct 32 TRYDWPLQPRPSVSRRFDPPARRWLSGHRGVDLAAVPGSAVLAARAGTVTFAGPVVDRDV 91
Query 99 VSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGA 158
V++ HP G+ T+YEP+ QVR G+ V A V+G L AGH C++AACLHWGA G A
Sbjct 92 VAVLHPDGVTTTYEPLTPQVRRGEHVRAGQVLGYLRAGHANCRSAACLHWGARRGDGRAA 151
Query 159 NYVDPLGLLKSTPIRLKPLSSEGRT 183
Y++PL LL IRLKP+ + RT
Sbjct 152 EYLNPLALLGLLRIRLKPVVDDERT 176
>gi|296139373|ref|YP_003646616.1| peptidase M23 [Tsukamurella paurometabola DSM 20162]
gi|296027507|gb|ADG78277.1| Peptidase M23 [Tsukamurella paurometabola DSM 20162]
Length=169
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/156 (49%), Positives = 89/156 (58%), Gaps = 2/156 (1%)
Query 22 LILCWSLLGAAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYA 81
+LC L A P A S WPL P PAV R F W PGHRGVDLAG GQ V+A
Sbjct 7 FLLCLLLPAATPVRAA-SEYAWPLDPRPAVARPFANPDERWQPGHRGVDLAGSAGQTVHA 65
Query 82 AGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQ-VRVGQPVSAPTVIGALAAGHPGC 140
AG+ V G + R V+S+ HP GL T+YEP+ V G V+ T +G LAAGHPGC
Sbjct 66 AGAGRVHHVGRVDDRIVISVLHPNGLLTTYEPITESGVAEGDEVTVGTALGTLAAGHPGC 125
Query 141 QAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKP 176
A CLHWG G A Y +PL L+ + P+RL P
Sbjct 126 PVAVCLHWGLRRGSGHAARYFNPLLLVGAAPVRLLP 161
>gi|284992376|ref|YP_003410930.1| peptidase M23 [Geodermatophilus obscurus DSM 43160]
gi|284065621|gb|ADB76559.1| Peptidase M23 [Geodermatophilus obscurus DSM 43160]
Length=175
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/128 (56%), Positives = 83/128 (65%), Gaps = 4/128 (3%)
Query 50 AVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRT 109
AV R FD + PGHRG DLAG PG PV AAG VVF G++AGRPVVS+ H GGLRT
Sbjct 51 AVTRPFDPPPHRYGPGHRGADLAGAPGTPVLAAGDGVVVFTGMVAGRPVVSVDHAGGLRT 110
Query 110 SYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKS 169
+YEPV A V G+PV+ TV+G L GH GC A CLHWG G Y+DPL LL+
Sbjct 111 TYEPVDAVVGAGRPVARGTVLGTLVGGHAGCPVATCLHWGLR----RGEVYLDPLSLLEP 166
Query 170 TPIRLKPL 177
+RL P+
Sbjct 167 PEVRLLPM 174
>gi|257055040|ref|YP_003132872.1| metalloendopeptidase-like membrane protein [Saccharomonospora
viridis DSM 43017]
gi|256584912|gb|ACU96045.1| metalloendopeptidase-like membrane protein [Saccharomonospora
viridis DSM 43017]
Length=219
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/138 (53%), Positives = 84/138 (61%), Gaps = 1/138 (0%)
Query 40 RLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVV 99
R WPL P VVR F S + PGHRGVDLA PGQ V A+ V+FAG +AGR VV
Sbjct 74 RFSWPLSGEPDVVRLFHRPSSTYGPGHRGVDLAATPGQDVLASAEGVVIFAGRVAGRGVV 133
Query 100 SLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGAN 159
S+ H GLRT+YEPV V GQ V VIG +A GH GC ACLHWG + +
Sbjct 134 SIRHNDGLRTTYEPVRWSVSPGQRVRRGQVIGTVAPGHDGCPVEACLHWGVRRDGTANTD 193
Query 160 YVDPLGL-LKSTPIRLKP 176
Y+DPL L L + P+RLKP
Sbjct 194 YLDPLRLVLPAAPLRLKP 211
>gi|317508415|ref|ZP_07966085.1| peptidase family M23 [Segniliparus rugosus ATCC BAA-974]
gi|316253262|gb|EFV12662.1| peptidase family M23 [Segniliparus rugosus ATCC BAA-974]
Length=166
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/164 (47%), Positives = 91/164 (56%), Gaps = 6/164 (3%)
Query 21 VLILCWSLLG------AAPAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGR 74
+L LC L G A HA + WPL P P V ++FD W GHRGVDL
Sbjct 2 LLALCACLSGSLCPARAHSGHAPTTGFVWPLAPKPRVAQKFDPPRERWGSGHRGVDLVAS 61
Query 75 PGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALA 134
G V +AG VVFA + G VS+ HP GLRT+YEPV VR G+ V+A IG L
Sbjct 62 EGAVVRSAGRGRVVFANSINGVGSVSVEHPSGLRTTYEPVEPSVRPGELVAAGDPIGRLV 121
Query 135 AGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKSTPIRLKPLS 178
AGHPGC ACLHWG G Y +PL L+ + PIRLKP++
Sbjct 122 AGHPGCPVRACLHWGLKLGHGHSDRYYNPLVLVAALPIRLKPMA 165
>gi|315502443|ref|YP_004081330.1| peptidase m23 [Micromonospora sp. L5]
gi|315409062|gb|ADU07179.1| Peptidase M23 [Micromonospora sp. L5]
Length=192
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/122 (56%), Positives = 81/122 (67%), Gaps = 4/122 (3%)
Query 43 WPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLA 102
WPL P VVR+FD W GHRGVDLA PG PV AAG+ TV+FAG +AGRPV+++
Sbjct 56 WPLPGAPRVVRRFDPPPQPWLSGHRGVDLAAAPGAPVLAAGAGTVLFAGTVAGRPVLTVG 115
Query 103 HPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVD 162
H GLRT+YEPV +++ G PV A T +G L AGH GC AACLHWG A Y+D
Sbjct 116 HSDGLRTTYEPVRSRLTAGTPVDAGTPVGDLLAGHRGCAEAACLHWGLR----RDAEYLD 171
Query 163 PL 164
PL
Sbjct 172 PL 173
>gi|134102477|ref|YP_001108138.1| putative peptidase [Saccharopolyspora erythraea NRRL 2338]
gi|291004132|ref|ZP_06562105.1| putative peptidase [Saccharopolyspora erythraea NRRL 2338]
gi|133915100|emb|CAM05213.1| putative peptidase [Saccharopolyspora erythraea NRRL 2338]
Length=180
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/140 (52%), Positives = 83/140 (60%), Gaps = 7/140 (5%)
Query 40 RLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVV 99
R GWP+ P V R F+A + PGHRGVDL G GQ V AAG V++AG LA R +V
Sbjct 39 RFGWPMAGAPQVTRPFEAPDHAYGPGHRGVDLVGDVGQAVLAAGPGLVLYAGPLANRNLV 98
Query 100 SLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAA---ACLHWGAMWGPAS 156
S+ HPGGLRT+YEPV V VGQ V IG L AGHP C A+ CLHWGA
Sbjct 99 SIEHPGGLRTTYEPVTPTVAVGQQVVRGQQIGTLDAGHPECTASPPNTCLHWGAR----R 154
Query 157 GANYVDPLGLLKSTPIRLKP 176
Y+DPL LL +RL P
Sbjct 155 RTVYLDPLTLLGLGHVRLLP 174
>gi|305681011|ref|ZP_07403818.1| peptidase, M23 family [Corynebacterium matruchotii ATCC 14266]
gi|305659216|gb|EFM48716.1| peptidase, M23 family [Corynebacterium matruchotii ATCC 14266]
Length=210
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/138 (50%), Positives = 86/138 (63%), Gaps = 9/138 (6%)
Query 39 SRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPV 98
+RL P R V+R F+ + NW PGHRGVDL P P+YAAG TV++AG+LAG P
Sbjct 78 TRLPRPNR----VLRTFNKPAKNWLPGHRGVDLEAAPTDPIYAAGDGTVIYAGILAGIPT 133
Query 99 VSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGA 158
VS+ HPGGLRT+Y+PV+ V VG V+ IG LA G G L WGA +G
Sbjct 134 VSIEHPGGLRTTYQPVLPLVAVGDTVTGQQPIGTLAPG--GTHGYPGLQWGAKFG---AD 188
Query 159 NYVDPLGLLKSTPIRLKP 176
+Y++PL LL + IRLKP
Sbjct 189 DYINPLTLLPAPVIRLKP 206
>gi|238063315|ref|ZP_04608024.1| peptidase M23B [Micromonospora sp. ATCC 39149]
gi|237885126|gb|EEP73954.1| peptidase M23B [Micromonospora sp. ATCC 39149]
Length=201
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/149 (49%), Positives = 85/149 (58%), Gaps = 5/149 (3%)
Query 29 LGAAPAHAD-DSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATV 87
+G PA A R WPL P R+F+ W PGHRGVDL PG V AAGS V
Sbjct 56 VGVEPATAAVPVRFRWPLDGVPRPARRFEPPPQPWLPGHRGVDLIAEPGAVVRAAGSGVV 115
Query 88 VFAGLLAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLH 147
+FAG +AGRPVV++ H GLRT+YEPV+ VR G V+ +G L GH GC CLH
Sbjct 116 LFAGQVAGRPVVTVGHTAGLRTTYEPVLPGVRAGDQVALGVPLGQLRPGHVGCPGGTCLH 175
Query 148 WGAMWGPASGANYVDPLGLLKSTPIRLKP 176
WG G Y+DPL LL P+RL P
Sbjct 176 WGLR----RGEEYLDPLALLGLGPVRLLP 200
>gi|326771761|ref|ZP_08231046.1| M23 peptidase domain protein [Actinomyces viscosus C505]
gi|326637894|gb|EGE38795.1| M23 peptidase domain protein [Actinomyces viscosus C505]
Length=175
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/138 (49%), Positives = 82/138 (60%), Gaps = 4/138 (2%)
Query 40 RLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVV 99
R WP P VV FD + W GHRGVDLA G + +A + TV FAG++AGRPVV
Sbjct 41 RYQWPTGAPATVVEDFDPPAVVWGRGHRGVDLAAAEGTQIRSAAAGTVAFAGMVAGRPVV 100
Query 100 SLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGAN 159
S+ H G+RT+YEPV V G V+A +IG L AGH LHWGA GP +
Sbjct 101 SIDHADGIRTTYEPVEPAVSAGDTVAAGQIIGTLLAGH-RSDGVCALHWGARTGPKT--- 156
Query 160 YVDPLGLLKSTPIRLKPL 177
Y++PL LL+ IRLKPL
Sbjct 157 YINPLRLLQPAVIRLKPL 174
>gi|326333661|ref|ZP_08199898.1| M23 peptidase domain protein [Nocardioidaceae bacterium Broad-1]
gi|325948567|gb|EGD40670.1| M23 peptidase domain protein [Nocardioidaceae bacterium Broad-1]
Length=207
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/136 (53%), Positives = 86/136 (64%), Gaps = 4/136 (2%)
Query 43 WPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLA 102
WPL P P VVR+FD W GHRGVDLAG PG V +A + TVVF G++AG+PVVS+
Sbjct 68 WPLAPRPEVVRRFDPPDAPWGAGHRGVDLAGSPGAVVRSAIAGTVVFVGVIAGKPVVSVD 127
Query 103 HPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVD 162
H G RT+YEPVVA V G PV+A +G L C AACLHWG W + Y+D
Sbjct 128 H-GATRTTYEPVVATVTEGDPVAAGAPLGRLGIAGSHCFPAACLHWG--WIRNADDVYLD 184
Query 163 PLGLLKS-TPIRLKPL 177
PL L+ + P+RL PL
Sbjct 185 PLLLVDAPRPVRLLPL 200
>gi|225021107|ref|ZP_03710299.1| hypothetical protein CORMATOL_01119 [Corynebacterium matruchotii
ATCC 33806]
gi|224946107|gb|EEG27316.1| hypothetical protein CORMATOL_01119 [Corynebacterium matruchotii
ATCC 33806]
Length=125
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 81/126 (65%), Gaps = 5/126 (3%)
Query 51 VVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLAHPGGLRTS 110
++R F+ + NW PGHRGVDL P P+YAAG TV++AG+LAG P VS+ HPGGLRT+
Sbjct 1 MLRTFNKPAKNWLPGHRGVDLEAAPTDPIYAAGDGTVIYAGILAGIPTVSIEHPGGLRTT 60
Query 111 YEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVDPLGLLKST 170
Y+PV+ V VG V+ IG LA G G L WGA +G +Y++PL LL +
Sbjct 61 YQPVLPLVAVGDTVTGQQPIGTLAPG--GTHGYPGLQWGAKFG---ADDYINPLTLLPAP 115
Query 171 PIRLKP 176
IRLKP
Sbjct 116 VIRLKP 121
>gi|302525187|ref|ZP_07277529.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302434082|gb|EFL05898.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=165
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/145 (47%), Positives = 84/145 (58%), Gaps = 5/145 (3%)
Query 33 PAHADDSRLGWPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGL 92
PA + RL WPL P P V R F+ + + PGHRGVDL GQ V AA VVFAG
Sbjct 20 PAPEEPGRLAWPLTPRPHVTRNFEPPATPFGPGHRGVDLEAAAGQQVLAADMGVVVFAGQ 79
Query 93 LAGRPVVSLAHPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMW 152
+AG+ VV++ H GGL T+Y P+ V G + +G A GHPGC A CLHWGA
Sbjct 80 VAGQGVVAIDHDGGLHTTYLPIAPTVATGDQIYRGQPLGTAAPGHPGCPTATCLHWGAR- 138
Query 153 GPASGANYVDPLGLLKS-TPIRLKP 176
G Y+DPL L+ + + +RLKP
Sbjct 139 ---RGTEYIDPLALVGTPSRVRLKP 160
>gi|317125402|ref|YP_004099514.1| peptidase M23 [Intrasporangium calvum DSM 43043]
gi|315589490|gb|ADU48787.1| Peptidase M23 [Intrasporangium calvum DSM 43043]
Length=188
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/136 (48%), Positives = 78/136 (58%), Gaps = 4/136 (2%)
Query 43 WPLRPPPAVVRQFDAASPNWNPGHRGVDLAGRPGQPVYAAGSATVVFAGLLAGRPVVSLA 102
WPL P P V R DA W PGHRGVDL GQ V + + V FA LAGR V+ +
Sbjct 57 WPLAPEPEVERPSDAPRRRWEPGHRGVDLRASVGQEVRSPAAGEVAFAARLAGRSVLVVR 116
Query 103 HPGGLRTSYEPVVAQVRVGQPVSAPTVIGALAAGHPGCQAAACLHWGAMWGPASGANYVD 162
HPGGLR+++EPVV + VG PV+ VIG + C A CLHWG + G Y+D
Sbjct 117 HPGGLRSTFEPVVGSLPVGSPVAPGEVIGLVTDESTHCDPATCLHWGVL----RGREYLD 172
Query 163 PLGLLKSTPIRLKPLS 178
PL LL+ P+ L PL
Sbjct 173 PLVLLRRAPVILLPLE 188
Lambda K H
0.319 0.136 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 355796561820
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40