BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2892c Length=408 Score E Sequences producing significant alignments: (Bits) Value gi|15842434|ref|NP_337471.1| PPE family protein [Mycobacterium t... 786 0.0 gi|298526361|ref|ZP_07013770.1| PPE family protein [Mycobacteriu... 783 0.0 gi|340627882|ref|YP_004746334.1| PPE family protein [Mycobacteri... 780 0.0 gi|253798020|ref|YP_003031021.1| PPE family protein [Mycobacteri... 776 0.0 gi|339295729|gb|AEJ47840.1| PPE family protein [Mycobacterium tu... 772 0.0 gi|313659840|ref|ZP_07816720.1| PPE family protein [Mycobacteriu... 739 0.0 gi|254232986|ref|ZP_04926313.1| PPE family protein [Mycobacteriu... 629 3e-178 gi|240171296|ref|ZP_04749955.1| PPE family protein [Mycobacteriu... 318 7e-85 gi|183981918|ref|YP_001850209.1| PPE family protein [Mycobacteri... 292 8e-77 gi|118617688|ref|YP_906020.1| PPE family protein [Mycobacterium ... 292 8e-77 gi|289574463|ref|ZP_06454690.1| PPE family protein [Mycobacteriu... 285 8e-75 gi|31792975|ref|NP_855468.1| PPE family protein [Mycobacterium b... 283 5e-74 gi|148661594|ref|YP_001283117.1| PPE family protein [Mycobacteri... 281 2e-73 gi|15841255|ref|NP_336292.1| PPE family protein [Mycobacterium t... 280 3e-73 gi|57116909|ref|YP_177833.1| PPE family protein [Mycobacterium t... 280 3e-73 gi|340626799|ref|YP_004745251.1| PPE family protein [Mycobacteri... 279 6e-73 gi|289569852|ref|ZP_06450079.1| PPE family protein [Mycobacteriu... 279 7e-73 gi|254231975|ref|ZP_04925302.1| PPE family protein [Mycobacteriu... 279 7e-73 gi|254364619|ref|ZP_04980665.1| PPE family protein [Mycobacteriu... 279 7e-73 gi|344219609|gb|AEN00240.1| PPE family protein [Mycobacterium tu... 277 2e-72 gi|253799173|ref|YP_003032174.1| PPE family protein [Mycobacteri... 276 4e-72 gi|289554441|ref|ZP_06443651.1| PPE family protein [Mycobacteriu... 276 6e-72 gi|294996698|ref|ZP_06802389.1| PPE family protein [Mycobacteriu... 275 8e-72 gi|297731334|ref|ZP_06960452.1| PPE family protein [Mycobacteriu... 275 1e-71 gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacteriu... 274 2e-71 gi|289745781|ref|ZP_06505159.1| PPE family protein [Mycobacteriu... 274 2e-71 gi|308370824|ref|ZP_07422853.2| putative PPE family protein [Myc... 272 9e-71 gi|31792978|ref|NP_855471.1| PPE family protein [Mycobacterium b... 271 1e-70 gi|57116912|ref|YP_177836.1| PPE family protein [Mycobacterium t... 271 2e-70 gi|15841259|ref|NP_336296.1| PPE family protein [Mycobacterium t... 270 2e-70 gi|289574467|ref|ZP_06454694.1| PPE family protein [Mycobacteriu... 269 8e-70 gi|148823002|ref|YP_001287756.1| PPE family protein [Mycobacteri... 268 1e-69 gi|289569856|ref|ZP_06450083.1| PPE family protein [Mycobacteriu... 268 1e-69 gi|340626802|ref|YP_004745254.1| PPE family protein [Mycobacteri... 268 1e-69 gi|296164778|ref|ZP_06847340.1| PPE family protein [Mycobacteriu... 262 9e-68 gi|167967964|ref|ZP_02550241.1| PPE family protein [Mycobacteriu... 253 6e-65 gi|254550794|ref|ZP_05141241.1| PPE family protein [Mycobacteriu... 251 1e-64 gi|313658666|ref|ZP_07815546.1| PPE family protein [Mycobacteriu... 247 2e-63 gi|212596596|gb|ACJ35591.1| PPE24 [Mycobacterium intracellulare ... 244 2e-62 gi|212596073|gb|ACJ35549.1| PPE24 [Mycobacterium avium subsp. av... 242 8e-62 gi|118464876|ref|YP_882114.1| PPE family protein [Mycobacterium ... 241 1e-61 gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [My... 240 4e-61 gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacteri... 239 8e-61 gi|308379035|ref|ZP_07484774.2| putative PPE family protein [Myc... 235 1e-59 gi|118618472|ref|YP_906804.1| PPE family protein [Mycobacterium ... 234 2e-59 gi|296167735|ref|ZP_06849952.1| PPE family protein [Mycobacteriu... 233 5e-59 gi|41407603|ref|NP_960439.1| hypothetical protein MAP1505 [Mycob... 233 5e-59 gi|336457651|gb|EGO36655.1| PPE-repeat containing protein [Mycob... 233 5e-59 gi|240167787|ref|ZP_04746446.1| PPE family protein [Mycobacteriu... 229 6e-58 gi|342859619|ref|ZP_08716272.1| PPE family protein [Mycobacteriu... 229 8e-58 >gi|15842434|ref|NP_337471.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31794068|ref|NP_856561.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117034|ref|YP_177913.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 28 more sequence titles Length=408 Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR Sbjct 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA Sbjct 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD Sbjct 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG Sbjct 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 >gi|298526361|ref|ZP_07013770.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] gi|298496155|gb|EFI31449.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] Length=408 Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/408 (99%), Positives = 407/408 (99%), Gaps = 0/408 (0%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVP PVVVANRALLVAL Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPLPVVVANRALLVAL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR Sbjct 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA Sbjct 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD Sbjct 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG Sbjct 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 >gi|340627882|ref|YP_004746334.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006072|emb|CCC45244.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=408 Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/408 (99%), Positives = 405/408 (99%), Gaps = 0/408 (0%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYW GP Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWVGP 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMY YAGSAAIATELTPFT APVTTSPAALA Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYTYAGSAAIATELTPFTPAPVTTSPAALA 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 GQAAATVSSTVPP+ATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR Sbjct 181 GQAAATVSSTVPPVATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA Sbjct 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD Sbjct 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG Sbjct 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 >gi|253798020|ref|YP_003031021.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289553319|ref|ZP_06442529.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|289755004|ref|ZP_06514382.1| PPE family protein [Mycobacterium tuberculosis EAS054] 30 more sequence titles Length=404 Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/404 (99%), Positives = 404/404 (100%), Gaps = 0/404 (0%) Query 5 VLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAAS 64 +LPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAAS Sbjct 1 MLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAAS 60 Query 65 MVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATN 124 MVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATN Sbjct 61 MVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATN 120 Query 125 FFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAA 184 FFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAA Sbjct 121 FFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAA 180 Query 185 ATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGI 244 ATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGI Sbjct 181 ATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGI 240 Query 245 SYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGV 304 SYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGV Sbjct 241 SYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGV 300 Query 305 QTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTA 364 QTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTA Sbjct 301 QTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTA 360 Query 365 LRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 LRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG Sbjct 361 LRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 404 >gi|339295729|gb|AEJ47840.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=404 Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 5 VLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAAS 64 +LPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAAS Sbjct 1 MLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAAS 60 Query 65 MVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATN 124 MVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATN Sbjct 61 MVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATN 120 Query 125 FFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAA 184 FFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAA Sbjct 121 FFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAA 180 Query 185 ATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGI 244 ATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGI Sbjct 181 ATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGI 240 Query 245 SYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGV 304 SYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGV Sbjct 241 SYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGV 300 Query 305 QTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTA 364 QTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTA Sbjct 301 QTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTA 360 Query 365 LRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 LRGTA NALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG Sbjct 361 LRGTAGNALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 404 >gi|313659840|ref|ZP_07816720.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=385 Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/385 (100%), Positives = 385/385 (100%), Gaps = 0/385 (0%) Query 24 MMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAASMVAAVTPYVAWLSATAGQA 83 MMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAASMVAAVTPYVAWLSATAGQA Sbjct 1 MMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAASMVAAVTPYVAWLSATAGQA 60 Query 84 EQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATNFFGQNTPAIAATEAQYAEM 143 EQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATNFFGQNTPAIAATEAQYAEM Sbjct 61 EQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATNFFGQNTPAIAATEAQYAEM 120 Query 144 WAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAAATVSSTVPPLATTAAVPQL 203 WAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAAATVSSTVPPLATTAAVPQL Sbjct 121 WAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAAATVSSTVPPLATTAAVPQL 180 Query 204 LQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGISYFDEGLLQFEASLAQQAI 263 LQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGISYFDEGLLQFEASLAQQAI Sbjct 181 LQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGISYFDEGLLQFEASLAQQAI 240 Query 264 PGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGVQTPQPYWYWALDRESIGGS 323 PGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGVQTPQPYWYWALDRESIGGS Sbjct 241 PGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGVQTPQPYWYWALDRESIGGS 300 Query 324 VSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTALRGTAENALLRGFPMASAG 383 VSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTALRGTAENALLRGFPMASAG Sbjct 301 VSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTALRGTAENALLRGFPMASAG 360 Query 384 QSTGGGFVHKYGFRLAVMQRPPFAG 408 QSTGGGFVHKYGFRLAVMQRPPFAG Sbjct 361 QSTGGGFVHKYGFRLAVMQRPPFAG 385 >gi|254232986|ref|ZP_04926313.1| PPE family protein [Mycobacterium tuberculosis C] gi|124602045|gb|EAY61055.1| PPE family protein [Mycobacterium tuberculosis C] Length=411 Score = 629 bits (1622), Expect = 3e-178, Method: Compositional matrix adjust. Identities = 366/377 (98%), Positives = 370/377 (99%), Gaps = 0/377 (0%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR Sbjct 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRA+P VAGG A Sbjct 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRANPCVAGGCA 300 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 VG VQTPQPYWYWALDRESIGGSVSAALGKGSSAGSL VPPDWAARARWANPAAWRLPGD Sbjct 301 VGVVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLPVPPDWAARARWANPAAWRLPGD 360 Query 361 DVTALRGTAENALLRGF 377 DV A+RG AENALL+G Sbjct 361 DVFAVRGYAENALLQGI 377 >gi|240171296|ref|ZP_04749955.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=411 Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 231/418 (56%), Positives = 265/418 (64%), Gaps = 22/418 (5%) Query 2 DFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPA 61 D+G LPPEINS RMYAGPGSG M+AAAAAWD+LA ELG A GY ISELT A W GPA Sbjct 5 DYGALPPEINSARMYAGPGSGSMLAAAAAWDALAGELGAMASGYSSVISELTDAAWIGPA 64 Query 62 AASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALV 121 AASM+AA PYV WLSATA QAE QAR AAAAYE AFAMTVPPP V ANR LL+ LV Sbjct 65 AASMMAAAAPYVTWLSATAIQAEHTASQARVAAAAYETAFAMTVPPPAVTANRVLLMTLV 124 Query 122 ATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAG 181 ATNFFGQNTPAIAATE++YAEMWAQDAAAMY YAGS+A AT L PF P TT Sbjct 125 ATNFFGQNTPAIAATESEYAEMWAQDAAAMYGYAGSSATATVLAPFNPPPTTTDLTGSLR 184 Query 182 QAAAT-----------VSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGL 230 Q AA +++ + LA+T A+ L +LSS + P Y+A WL L + Sbjct 185 QTAAVAEVAAASAGTAITAKIWGLASTPAISHALARLSSNTWFPGYAAFAHWLEALLPEI 244 Query 231 TPDNRMTIVRLLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPR 290 TP R +VRL G+SYF G+ QF AS+AQQ IPG+PGGAGDSGSSVLDSWGP + G Sbjct 245 TPAERTALVRLAGLSYFGMGMGQFIASIAQQTIPGSPGGAGDSGSSVLDSWGPKLRFGAP 304 Query 291 ASPSVAGGGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWA 350 G AV P+ YW LDR + VSA +GK S GSLS P W A R Sbjct 305 PGAGAGGAAAV-----PEQYWE-RLDR--LARPVSAVMGKAGSIGSLSTPSSWDASVRVL 356 Query 351 NPAAWRLPGDDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + A D + +L NA L+G PM +AG+ +YGFR VMQR P AG Sbjct 357 H-APLDQEFDMIGSLANAKANAYLQGMPMTAAGKHAAAD--QRYGFRYRVMQRSPSAG 411 >gi|183981918|ref|YP_001850209.1| PPE family protein [Mycobacterium marinum M] gi|183175244|gb|ACC40354.1| PPE family protein [Mycobacterium marinum M] Length=391 Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 219/415 (53%), Positives = 255/415 (62%), Gaps = 36/415 (8%) Query 2 DFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPA 61 D+G PPEINS MY GPGS M+AAAAAWD++A ELG+ A GY ISELT W GPA Sbjct 5 DYGARPPEINSALMYFGPGSRSMLAAAAAWDAVAFELGVLASGYTSVISELTSGPWVGPA 64 Query 62 AASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALV 121 AASMV A PYVAWL A+A +AE+ QAR+AAAAYE AF MTVPPPVV ANR LL L+ Sbjct 65 AASMVGASAPYVAWLRASAIRAERTASQARSAAAAYEAAFVMTVPPPVVAANRVLLTTLI 124 Query 122 ATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAG 181 TNFFGQNTPAIA TEAQYAEMWAQDAAAMY YA S+A AT LTPF P TT+ Sbjct 125 VTNFFGQNTPAIAVTEAQYAEMWAQDAAAMYGYAASSATATRLTPFVPPPATTNLPGPLW 184 Query 182 QAAATVSSTVPPLATTAAV---PQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTI 238 QA+A + ATT AV LL +P +AL QWL +L G+TP R T+ Sbjct 185 QASAMGKA-----ATTTAVAGGSTLLAATRRPVALPRLAALAQWLEAHLPGITPAERTTV 239 Query 239 VRLLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGG 298 VRLLG SYF G++QF S+A QAIPGT GAG SGSSV+D+WG + A G Sbjct 240 VRLLGQSYFALGMVQFSTSIALQAIPGTASGAGASGSSVVDNWGSMLHG--------AHG 291 Query 299 GAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARAR-WANPAAWRL 357 GA + D ++ VSAA+GK GSLS P W A R +AN AA Sbjct 292 GATAEFEE---------DLGTLTRPVSAAMGKARLTGSLSTPSSWGAGVREFANAAA--- 339 Query 358 PGDDVTALRGTA----ENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 D+ L G+ NA L+G PM +AG++T KYGFR VMQR P G Sbjct 340 --DEQLDLAGSVASAKSNAYLQGMPMTAAGRNTAVA-EQKYGFRYRVMQRTPAGG 391 >gi|118617688|ref|YP_906020.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118569798|gb|ABL04549.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=391 Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 219/415 (53%), Positives = 255/415 (62%), Gaps = 36/415 (8%) Query 2 DFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPA 61 D+G PPEINS MY GPGS M+AAAAAWD++A ELG+ A GY ISELT W GPA Sbjct 5 DYGARPPEINSALMYFGPGSRSMLAAAAAWDAVAFELGVLASGYTSVISELTSGPWVGPA 64 Query 62 AASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALV 121 AASMV A PYVAWL A+A +AE+ QAR+AAAAYE AF MTVPPPVV ANR LL L+ Sbjct 65 AASMVGASAPYVAWLRASAIRAERTASQARSAAAAYEAAFVMTVPPPVVAANRVLLTTLI 124 Query 122 ATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAG 181 TNFFGQNTPAIA TEAQYAEMWAQDAAAMY YA S+A AT LTPF P TT+ Sbjct 125 VTNFFGQNTPAIAVTEAQYAEMWAQDAAAMYGYAASSATATRLTPFVPPPATTNLPGPLW 184 Query 182 QAAATVSSTVPPLATTAAV---PQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTI 238 QA+A + ATT AV LL +P +AL QWL +L G+TP R T+ Sbjct 185 QASAMGKA-----ATTTAVAGGSTLLAATRRPVALPRLAALAQWLEAHLPGITPAERTTV 239 Query 239 VRLLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGG 298 VRLLG SYF G++QF S+A QAIPGT GAG SGSSV+D+WG + A G Sbjct 240 VRLLGQSYFALGMVQFSTSIALQAIPGTASGAGGSGSSVVDNWGSMLHG--------AHG 291 Query 299 GAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARAR-WANPAAWRL 357 GA + D ++ VSAA+GK GSLS P W A R +AN AA Sbjct 292 GAAAEFEE---------DLGTLTRPVSAAMGKARLTGSLSTPSSWGAGVREFANAAA--- 339 Query 358 PGDDVTALRGTA----ENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 D+ L G+ NA L+G PM +AG++T KYGFR VMQR P G Sbjct 340 --DEQLDLAGSVASAKSNAYLQGMPMTAAGRNTAVA-EQKYGFRYRVMQRTPAGG 391 >gi|289574463|ref|ZP_06454690.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538894|gb|EFD43472.1| PPE family protein [Mycobacterium tuberculosis K85] Length=365 Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 204/408 (50%), Positives = 242/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAA WD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAPWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 181 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 229 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SYF G+ QF AS+AQQ G G + + +W PT P AG GA Sbjct 230 LLGQSYFATGMAQFFASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 277 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W Sbjct 278 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSA 317 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 318 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 >gi|31792975|ref|NP_855468.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121637688|ref|YP_977911.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990172|ref|YP_002644859.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618566|emb|CAD94518.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121493335|emb|CAL71806.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773285|dbj|BAH26091.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601715|emb|CCC64388.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=364 Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 207/408 (51%), Positives = 246/408 (61%), Gaps = 44/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 181 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 229 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SYF G+ QF AS+AQQ G G + + +W PT P AG GA Sbjct 230 LLGQSYFATGMAQFFASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 277 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W P A + + Sbjct 278 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTEPGAHAVSAN 317 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 318 P-TVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 364 >gi|148661594|ref|YP_001283117.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148505746|gb|ABQ73555.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=405 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 206/408 (51%), Positives = 243/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 LDFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 221 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 269 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SYF G+ QF AS+AQQ G G + + +W PT P AG GA Sbjct 270 LLGQSYFATGMAQFFASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 317 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W Sbjct 318 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSA 357 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 358 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 405 >gi|15841255|ref|NP_336292.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881482|gb|AAK46106.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=405 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 205/408 (51%), Positives = 242/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 LDFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 221 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 269 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SYF G+ QF AS+AQQ G G + + +W PT P AG GA Sbjct 270 LLGQSYFATGMAQFFASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 317 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VS +L + + G+LSVPP W Sbjct 318 --------------------SRAVSVSLARANKIGALSVPPSWVKTTALTESPVAHAVSA 357 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 358 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 405 >gi|57116909|ref|YP_177833.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|289447401|ref|ZP_06437145.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289750354|ref|ZP_06509732.1| PPE family protein [Mycobacterium tuberculosis T92] 17 more sequence titles Length=365 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 205/408 (51%), Positives = 243/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 181 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 229 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SYF G+ QF AS+AQQ G G + + +W PT P AG GA Sbjct 230 LLGQSYFATGMAQFFASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 277 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W Sbjct 278 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSA 317 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 318 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 >gi|340626799|ref|YP_004745251.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004989|emb|CCC44137.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=365 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 205/408 (51%), Positives = 243/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 181 AQVAAV-----------AAMPGLLQRLSSAASVSWPNPNDWWLVRLLGSITPTERTTIVR 229 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SYF G+ QF AS+AQQ G G + + +W PT P AG GA Sbjct 230 LLGQSYFATGMAQFFASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 277 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W Sbjct 278 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSA 317 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 318 NPTVGSSHGPHGLLRGLPLGSRITRRSGTFAHRYGFRHSVVARPPSAG 365 >gi|289569852|ref|ZP_06450079.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289543606|gb|EFD47254.1| PPE family protein [Mycobacterium tuberculosis T17] Length=365 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 204/408 (50%), Positives = 242/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W W+ L +TP R TIVR Sbjct 181 AQVAAV-----------AAMPGLLQRLSSAASVSWSHPNDWWIVRLLGSITPTERTTIVR 229 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SYF G+ QF AS+AQQ G G + + +W PT P AG GA Sbjct 230 LLGQSYFATGMAQFFASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 277 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W Sbjct 278 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSA 317 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 318 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 >gi|254231975|ref|ZP_04925302.1| PPE family protein [Mycobacterium tuberculosis C] gi|124601034|gb|EAY60044.1| PPE family protein [Mycobacterium tuberculosis C] Length=365 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 204/408 (50%), Positives = 242/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 181 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 229 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SYF G+ QF AS+AQQ G G + + +W PT P AG GA Sbjct 230 LLGQSYFATGMAQFFASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 277 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VS +L + + G+LSVPP W Sbjct 278 --------------------SRAVSVSLARANKIGALSVPPSWVKTTALTESPVAHAVSA 317 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 318 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 >gi|254364619|ref|ZP_04980665.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134150133|gb|EBA42178.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=371 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 205/408 (51%), Positives = 242/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 LDFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 7 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 66 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 67 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 126 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 127 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 186 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 187 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 235 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SYF G+ QF AS+AQQ G G + + +W PT P AG GA Sbjct 236 LLGQSYFATGMAQFFASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 283 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VS +L + + G+LSVPP W Sbjct 284 --------------------SRAVSVSLARANKIGALSVPPSWVKTTALTESPVAHAVSA 323 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 324 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 371 >gi|344219609|gb|AEN00240.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=365 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 203/408 (50%), Positives = 242/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 181 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 229 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 230 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 277 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L +G+ G+LSVPP W Sbjct 278 --------------------SRAVSASLARGNKIGALSVPPSWVKTTALTESPVAHAVSA 317 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 318 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 >gi|253799173|ref|YP_003032174.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|253320676|gb|ACT25279.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|328458928|gb|AEB04351.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=405 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 203/408 (50%), Positives = 241/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 LDFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 221 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 269 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 270 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 317 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W Sbjct 318 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSA 357 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 358 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 405 >gi|289554441|ref|ZP_06443651.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|289439073|gb|EFD21566.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=391 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 203/408 (50%), Positives = 241/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 LDFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 27 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 86 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 87 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 146 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 147 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 206 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 207 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 255 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 256 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 303 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W Sbjct 304 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSA 343 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 344 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 391 >gi|294996698|ref|ZP_06802389.1| PPE family protein [Mycobacterium tuberculosis 210] gi|297634345|ref|ZP_06952125.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=365 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 202/408 (50%), Positives = 241/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 181 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 229 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 230 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 277 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W Sbjct 278 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSA 317 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 318 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 >gi|297731334|ref|ZP_06960452.1| PPE family protein [Mycobacterium tuberculosis KZN R506] Length=371 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 203/408 (50%), Positives = 241/408 (60%), Gaps = 43/408 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 LDFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 7 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 66 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 67 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 126 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 127 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 186 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Q AA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 187 AQVAAV-----------AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 235 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 236 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 283 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W Sbjct 284 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSA 323 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 324 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 371 >gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342131207|gb|EGT84488.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=417 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 206/441 (47%), Positives = 249/441 (57%), Gaps = 57/441 (12%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMYAGPGSGPMMAAAAAWD L AEL AA GY ISELT A W GP Sbjct 1 MDFGALPPEINSGRMYAGPGSGPMMAAAAAWDGLGAELSSAASGYTSVISELTHAPWVGP 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A++SM++AVTPYV+WLS A QAE+ QARAAAAA+E AFAMTVPPPV+ ANR LL L Sbjct 61 ASSSMLSAVTPYVSWLSVLAAQAEETAGQARAAAAAFEAAFAMTVPPPVIAANRVLLANL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 VATNF GQNTPAIAATEAQY EMWAQDAAAMY YAGS+A+A+EL P T+ P TT+P A + Sbjct 121 VATNFLGQNTPAIAATEAQYMEMWAQDAAAMYGYAGSSAVASELPPLTSPPNTTTPEADS 180 Query 181 GQAAATVSSTVPPLATTA------AVPQLLQQLSSTSLIPWYSALQ-------QWLAENL 227 QAAA + P TA A PQ L ++ ++ + WL + Sbjct 181 DQAAAVAKAVAEPAGNTAQTTSQLATPQALSAGATQAVTQASTTTTATQPGPFTWLQNLI 240 Query 228 LGL------TPDNRMT----------IVRLLGISYFDEGLLQFEASLAQQAIPGTPGGAG 271 G TP N + + G++YF G+ F +S+AQQ G G Sbjct 241 NGFLTSGLPTPTNNYAGLNTGMYGTLLKQTTGLAYFSTGITSFWSSIAQQLT----FGPG 296 Query 272 DSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGVQTPQPYWYWALDRESIGGSVSAALGKG 331 + + +W PT P A G G+VSA +G+ Sbjct 297 GTTAGAGGAWFPT--------PQFASLGLGNLGGVGHV------------GAVSAGVGQA 336 Query 332 SSAGSLSVPPDWAARARWANPAAWRLPGDDVTALRGTAE---NALLRGFPMASAGQS-TG 387 G LSVP WA +PAA + A G A N LLRG P+ S G+ Sbjct 337 GRVGMLSVPQHWATLTSSVSPAALSEEATPIQAAAGGANSPANGLLRGMPVGSIGRRGAA 396 Query 388 GGFVHKYGFRLAVMQRPPFAG 408 G+V+KYGFR +V+ RPP AG Sbjct 397 AGYVNKYGFRYSVLTRPPSAG 417 >gi|289745781|ref|ZP_06505159.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289686309|gb|EFD53797.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=390 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 199/408 (49%), Positives = 233/408 (58%), Gaps = 58/408 (14%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 LDFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 QA A+VS W + WL L +TP R TIVR Sbjct 221 AQAVASVS--------------------------WPNPNDWWLVRLLGSITPTERTTIVR 254 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SYF G+ QF AS+AQQ G G + + +W PT P AG GA Sbjct 255 LLGQSYFATGMAQFFASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 302 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W Sbjct 303 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSA 342 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 343 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 390 >gi|308370824|ref|ZP_07422853.2| putative PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308375681|ref|ZP_07444735.2| putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308377826|ref|ZP_07480546.2| putative PPE family protein [Mycobacterium tuberculosis SUMu009] gi|308330738|gb|EFP19589.1| putative PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308345534|gb|EFP34385.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308354478|gb|EFP43329.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009] Length=390 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 202/409 (50%), Positives = 237/409 (58%), Gaps = 60/409 (14%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 LDFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 QA A+VS W + WL L +TP R TIVR Sbjct 221 AQAVASVS--------------------------WPNPNDWWLVRLLGSITPTERTTIVR 254 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 255 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 302 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARA-RWANPAAWRLPG 359 G +VSA+L + G LSVPP WA A +A P Sbjct 303 --------------------GPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPM 342 Query 360 DDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + + LLRG P+A AG+ T G F H+YGFR +V+ R P AG Sbjct 343 SVIGEASSCGQGGLLRGIPLARAGRRT-GAFAHRYGFRHSVITRSPSAG 390 >gi|31792978|ref|NP_855471.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31618569|emb|CAD94521.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=350 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 201/409 (50%), Positives = 237/409 (58%), Gaps = 60/409 (14%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 QA A+VS W + WL L +TP R TIVR Sbjct 181 AQAVASVS--------------------------WSNPNDWWLVRLLGSITPTERTTIVR 214 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 215 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 262 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARA-RWANPAAWRLPG 359 G +VSA+L + G LSVPP WA A +A P Sbjct 263 --------------------GPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPM 302 Query 360 DDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + + LLRG P+A AG+ T G F H+YGFR +V+ R P AG Sbjct 303 SVIGEASSCGQGGLLRGIPLARAGRRT-GAFAHRYGFRHSVITRSPSAG 350 >gi|57116912|ref|YP_177836.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121637691|ref|YP_977914.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661597|ref|YP_001283120.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 47 more sequence titles Length=350 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 201/409 (50%), Positives = 237/409 (58%), Gaps = 60/409 (14%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 QA A+VS W + WL L +TP R TIVR Sbjct 181 AQAVASVS--------------------------WPNPNDWWLVRLLGSITPTERTTIVR 214 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 215 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 262 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARA-RWANPAAWRLPG 359 G +VSA+L + G LSVPP WA A +A P Sbjct 263 --------------------GPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPM 302 Query 360 DDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + + LLRG P+A AG+ T G F H+YGFR +V+ R P AG Sbjct 303 SVIGEASSCGQGGLLRGIPLARAGRRT-GAFAHRYGFRHSVITRSPSAG 350 >gi|15841259|ref|NP_336296.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|167967961|ref|ZP_02550238.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|253799169|ref|YP_003032170.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|254550799|ref|ZP_05141246.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|13881486|gb|AAK46110.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|253320672|gb|ACT25275.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|328458924|gb|AEB04347.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=363 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 201/409 (50%), Positives = 237/409 (58%), Gaps = 60/409 (14%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 14 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 73 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 74 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 133 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 134 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 193 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 QA A+VS W + WL L +TP R TIVR Sbjct 194 AQAVASVS--------------------------WPNPNDWWLVRLLGSITPTERTTIVR 227 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 228 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 275 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARA-RWANPAAWRLPG 359 G +VSA+L + G LSVPP WA A +A P Sbjct 276 --------------------GPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPM 315 Query 360 DDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + + LLRG P+A AG+ T G F H+YGFR +V+ R P AG Sbjct 316 SVIGEASSCGQGGLLRGIPLARAGRRT-GAFAHRYGFRHSVITRSPSAG 363 >gi|289574467|ref|ZP_06454694.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538898|gb|EFD43476.1| PPE family protein [Mycobacterium tuberculosis K85] Length=350 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 200/409 (49%), Positives = 236/409 (58%), Gaps = 60/409 (14%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTG W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGPPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 QA A+VS W + WL L +TP R TIVR Sbjct 181 AQAVASVS--------------------------WPNPNDWWLVRLLGSITPTERTTIVR 214 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 215 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 262 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARA-RWANPAAWRLPG 359 G +VSA+L + G LSVPP WA A +A P Sbjct 263 --------------------GPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPM 302 Query 360 DDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + + LLRG P+A AG+ T G F H+YGFR +V+ R P AG Sbjct 303 SVIGEASSCGQGGLLRGIPLARAGRRT-GAFAHRYGFRHSVITRSPSAG 350 >gi|148823002|ref|YP_001287756.1| PPE family protein [Mycobacterium tuberculosis F11] gi|148721529|gb|ABR06154.1| PPE family protein [Mycobacterium tuberculosis F11] Length=350 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 195/408 (48%), Positives = 231/408 (57%), Gaps = 58/408 (14%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 QA A+VS W + WL L +TP R TIVR Sbjct 181 AQAVASVS--------------------------WPNPNDWWLVRLLGSITPTERTTIVR 214 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 215 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 262 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGD 360 +VSA+L + + G+LSVPP W Sbjct 263 --------------------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSA 302 Query 361 DVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 303 NPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 350 >gi|289569856|ref|ZP_06450083.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289543610|gb|EFD47258.1| PPE family protein [Mycobacterium tuberculosis T17] Length=350 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 200/409 (49%), Positives = 236/409 (58%), Gaps = 60/409 (14%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SM AA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMEAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 QA A+VS W + WL L +TP R TIVR Sbjct 181 AQAVASVS--------------------------WPNPNDWWLVRLLGSITPTERTTIVR 214 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 215 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 262 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARA-RWANPAAWRLPG 359 G +VSA+L + G LSVPP WA A +A P Sbjct 263 --------------------GPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPM 302 Query 360 DDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + + LLRG P+A AG+ T G F H+YGFR +V+ R P AG Sbjct 303 SVIGEASSCGQGGLLRGIPLARAGRRT-GAFAHRYGFRHSVITRSPSAG 350 >gi|340626802|ref|YP_004745254.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004992|emb|CCC44140.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=350 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 199/409 (49%), Positives = 236/409 (58%), Gaps = 60/409 (14%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 QA A+VS W + WL L +TP R TIVR Sbjct 181 AQAVASVS--------------------------WPNPNDWWLVRLLGSITPTERTTIVR 214 Query 241 LLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGA 300 LLG SY G+ +F S+AQQ G G + + +W PT P AG GA Sbjct 215 LLGQSYLATGMARFLTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA 262 Query 301 VGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARA-RWANPAAWRLPG 359 +VSA+L + G LSVPP WA A +A P Sbjct 263 --------------------SRAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPM 302 Query 360 DDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 + + LLRG P+A AG+ + G F H+YGFR +V+ R P AG Sbjct 303 SVIGEASSCGQGGLLRGIPLARAGRRS-GAFAHRYGFRHSVITRSPSAG 350 >gi|296164778|ref|ZP_06847340.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899879|gb|EFG79323.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=411 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 209/435 (49%), Positives = 250/435 (58%), Gaps = 52/435 (11%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 DFG LPPEINSGRMYAGPGSGPMM AAAAWD LAAELG AA GY I ELT W GP Sbjct 2 FDFGALPPEINSGRMYAGPGSGPMMVAAAAWDVLAAELGTAASGYNSIIDELTNGPWVGP 61 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SM+AAVTPYV+WL+ AGQAE+ ARAAAAA+E AFAMTVPPPV+ ANR LL L Sbjct 62 ASTSMIAAVTPYVSWLTTIAGQAEETAGHARAAAAAFEAAFAMTVPPPVIAANRVLLATL 121 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSP---- 176 VATNFFGQNTPAI ATEAQY EMWAQDAAAMY YA S+ A+++TPF+AAP TT+P Sbjct 122 VATNFFGQNTPAIMATEAQYMEMWAQDAAAMYGYAASSTTASQMTPFSAAPQTTTPDGES 181 Query 177 ----------AALAGQAAATVSSTVPPLAT----TAAVPQLLQQLSSTSLIPWYSALQQW 222 AG A TVS+T LAT +A PQ QQ+ + P ++Q Sbjct 182 QQFAAVTQATTQQAGNTAQTVSNTSSQLATPQVLSATAPQTAQQVITAGTAPTTGSVQDV 241 Query 223 LAE--NLLGLTPDNRMTIVRLLGISYFDEGLLQFEASLAQQAIPGTPGGA--GDSGSSVL 278 L N LTP N I++ +YF G+ F S+ QQ G PGG+ G +G Sbjct 242 LPSPTNWWSLTPGNYTAIIKQTLQAYFGVGIGNFGWSIGQQLTFG-PGGSTVGSAG---- 296 Query 279 DSWGPTIFAGPRASPSVAGGGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLS 338 +W PT P A Q + GG+V+A G+ + G LS Sbjct 297 -TWFPT--------PQFA-----------QLGLGNLGSLGNAGGAVTAGAGQAAQVGGLS 336 Query 339 VPPDWAARARWANPA-AWRLPGDDVTALRGTAE--NALLRGFPM--ASAGQSTGGGFVHK 393 VP WA A +PA A + + + ++ NALLRG P G+ HK Sbjct 337 VPQQWATLASSVSPAEATDVEAAPIQTVSASSPPGNALLRGMPTGAMGRRAGAAAGYTHK 396 Query 394 YGFRLAVMQRPPFAG 408 YGFR +V+ RPP AG Sbjct 397 YGFRYSVLTRPPSAG 411 >gi|167967964|ref|ZP_02550241.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=351 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 193/394 (49%), Positives = 230/394 (59%), Gaps = 43/394 (10%) Query 15 MYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAASMVAAVTPYVA 74 MY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G A+ SMVAA TPYVA Sbjct 1 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 60 Query 75 WLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATNFFGQNTPAIA 134 WLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L+ATNFFGQN+ AIA Sbjct 61 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 120 Query 135 ATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAAATVSSTVPPL 194 EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Q AA Sbjct 121 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAV-------- 172 Query 195 ATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGISYFDEGLLQF 254 AA+P LLQ+LSS + + W + WL L +TP R TIVRLLG SYF G+ QF Sbjct 173 ---AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQF 229 Query 255 EASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGVQTPQPYWYWA 314 AS+AQQ G G + + +W PT P AG GA Sbjct 230 FASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA-------------- 263 Query 315 LDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTALRGTAENALL 374 +VSA+L + + G+LSVPP W + T + LL Sbjct 264 ------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSSHGPHGLL 317 Query 375 RGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 RG P+ S G F H+YGFR +V+ RPP AG Sbjct 318 RGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 351 >gi|254550794|ref|ZP_05141241.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=351 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 192/394 (49%), Positives = 229/394 (59%), Gaps = 43/394 (10%) Query 15 MYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAASMVAAVTPYVA 74 MY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTG W G A+ SMVAA TPYVA Sbjct 1 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGVPWVGAASLSMVAAATPYVA 60 Query 75 WLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATNFFGQNTPAIA 134 WLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L+ATNFFGQN+ AIA Sbjct 61 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 120 Query 135 ATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAAATVSSTVPPL 194 EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Q AA Sbjct 121 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAV-------- 172 Query 195 ATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGISYFDEGLLQF 254 AA+P LLQ+LSS + + W + WL L +TP R TIVRLLG SYF G+ QF Sbjct 173 ---AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQF 229 Query 255 EASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGVQTPQPYWYWA 314 AS+AQQ G G + + +W PT P AG GA Sbjct 230 FASIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA-------------- 263 Query 315 LDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTALRGTAENALL 374 +VSA+L + + G+LSVPP W + T + LL Sbjct 264 ------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSSHGPHGLL 317 Query 375 RGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 RG P+ S G F H+YGFR +V+ RPP AG Sbjct 318 RGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 351 >gi|313658666|ref|ZP_07815546.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=351 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 190/394 (49%), Positives = 228/394 (58%), Gaps = 43/394 (10%) Query 15 MYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAASMVAAVTPYVA 74 MY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G A+ SMVAA TPYVA Sbjct 1 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 60 Query 75 WLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATNFFGQNTPAIA 134 WLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L+ATNFFGQN+ AIA Sbjct 61 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 120 Query 135 ATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAAATVSSTVPPL 194 EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Q AA Sbjct 121 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAV-------- 172 Query 195 ATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGISYFDEGLLQF 254 AA+P LLQ+LSS + + W + WL L +TP R TIVRLLG SY G+ +F Sbjct 173 ---AAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARF 229 Query 255 EASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGVQTPQPYWYWA 314 S+AQQ G G + + +W PT P AG GA Sbjct 230 LTSIAQQLT----FGPGGTTAGSGGAWYPT--------PQFAGLGA-------------- 263 Query 315 LDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTALRGTAENALL 374 +VSA+L + + G+LSVPP W + T + LL Sbjct 264 ------SRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSSHGPHGLL 317 Query 375 RGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 RG P+ S G F H+YGFR +V+ RPP AG Sbjct 318 RGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 351 >gi|212596596|gb|ACJ35591.1| PPE24 [Mycobacterium intracellulare ATCC 13950] Length=403 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 197/428 (47%), Positives = 247/428 (58%), Gaps = 46/428 (10%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 LDFG LPPEINSGRMYAGPGSGPMMAAAAAWD +AAE+G+AA GY ++EL W GP Sbjct 2 LDFGALPPEINSGRMYAGPGSGPMMAAAAAWDEIAAEVGVAANGYNSVVTELISGPWVGP 61 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SM++A+ P+++WLSA A QAE+A Q R AAAA+E AFAMTVPPPV+ NR LL L Sbjct 62 ASISMISAIAPFISWLSAVAAQAEEAASQGRVAAAAFEAAFAMTVPPPVIAVNRVLLANL 121 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 +ATNFFGQNTPAIAATEAQY EMWAQDA AMY YA S+A+A+EL PF P T++P A + Sbjct 122 IATNFFGQNTPAIAATEAQYMEMWAQDAVAMYGYAASSAMASELAPFAPPPKTSTPDASS 181 Query 181 GQAAATVSSTVPPLATTA------AVPQLLQQLSS------TSLIPWYSALQQWLAENLL 228 QAAA + P TA A PQ L +S T+ S +N+ Sbjct 182 KQAAAVAKAVAEPAGNTAQNTSQVASPQALSLNASQATQAPTTATNAASTGTTTSLKNIF 241 Query 229 GLTPDNRMTIVRLLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPT-IFA 287 G N R G++YF G+ QF +S+AQQ G G S + +W PT FA Sbjct 242 GDPTFNDTIFKRTTGLAYFSNGMGQFASSIAQQLT----FGPGGSTAGAGGAWFPTPQFA 297 Query 288 GPRASPSVAGGGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARA 347 G G + G V+A+ G+ + G+LSVP WA Sbjct 298 NLGLGNLGGGAGHLSG--------------------VTASAGQAARIGTLSVPQHWATLT 337 Query 348 RWANPAAWRLPGDDVTALRGTAE------NALLRGFPMASAGQS-TGGGFVHKYGFRLAV 400 PA +P + T ++ A N LLRG P + G+ GG+V+KYGFR +V Sbjct 338 SAVTPAT--VPDLEATPVQAAATGTTGPANGLLRGMPAGALGRRGAAGGYVNKYGFRYSV 395 Query 401 MQRPPFAG 408 + RPP AG Sbjct 396 LTRPPSAG 403 >gi|212596073|gb|ACJ35549.1| PPE24 [Mycobacterium avium subsp. avium] Length=421 Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 208/445 (47%), Positives = 253/445 (57%), Gaps = 62/445 (13%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 DFG LPPEINSGRMYAGPGSGP+MAAAAAWD +AAELG+AA GY I+ELT W GP Sbjct 2 FDFGALPPEINSGRMYAGPGSGPLMAAAAAWDEVAAELGIAASGYHSVIAELTSGPWVGP 61 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMV+A+TPYV WLSA A QAE+ Q RAAAAA+E AFAMTVPPPV+ ANR LL L Sbjct 62 ASLSMVSAITPYVGWLSAVAAQAEETASQGRAAAAAFEAAFAMTVPPPVIAANRVLLATL 121 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 VATNFFGQNTPAIAATEAQY EMWAQDAAAMY YA ++ A+ L+PF A P TT+P + Sbjct 122 VATNFFGQNTPAIAATEAQYMEMWAQDAAAMYGYAAASQTASTLSPFAAPPNTTAPEGES 181 Query 181 GQAAATVSSTVPPLATTA----------AVPQLLQ-------------QLSSTSLIPWYS 217 QAAA + P +TA A PQ L S T W + Sbjct 182 DQAAAVSQAMAQPAGSTAQTAANTSSQLATPQALSAGTSQAATQASSSSASQTGPFTWLT 241 Query 218 ALQQWLAE--------NLLGLTPDNRMTIVRLL-GISYFDEGLLQFEASLAQQAIPGTPG 268 + Q L + N LGL+P +++ G+ YF G+ F + LAQQ + Sbjct 242 SALQNLQQSGLPTPTNNYLGLSPTFYTVMLKQTSGLGYFSNGITAFWSQLAQQLV----S 297 Query 269 GAGDSGSSVLDSWGPTIFAGPR-ASPSVAGGGAVGGVQTPQPYWYWALDRESIGGSVSAA 327 G G S + +W PT P+ AS + G+VGG S +VSA Sbjct 298 GPGGSTAGAGGAWYPT----PQFASLGLGNLGSVGGA--------------SHVSAVSAG 339 Query 328 LGKGSSAGSLSVPPDWAARARWANPAAWR---LPGDDVTALRGTAENALLRGFPMASAGQ 384 G+ AG+LSVP WA +PA G A N LLRG P+ + G+ Sbjct 340 AGR---AGALSVPQQWATLTSAVSPAVSEEGSAVQAAAGGAPGGAANGLLRGMPVGALGR 396 Query 385 S-TGGGFVHKYGFRLAVMQRPPFAG 408 G+V+KYGFR +V+ RPP AG Sbjct 397 RGAAAGYVNKYGFRYSVLTRPPSAG 421 >gi|118464876|ref|YP_882114.1| PPE family protein [Mycobacterium avium 104] gi|118166163|gb|ABK67060.1| ppe family protein [Mycobacterium avium 104] Length=421 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 207/445 (47%), Positives = 253/445 (57%), Gaps = 62/445 (13%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 DFG LPPEINSGRMYAGPGSGP+MAAAAAWD +AAELG+AA GY I+ELT W GP Sbjct 2 FDFGALPPEINSGRMYAGPGSGPLMAAAAAWDEVAAELGIAASGYHSVIAELTSGPWVGP 61 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMV+A+TPYV WLSA A QAE+ Q RAAAAA+E AFAMTVPPPV+ ANR LL L Sbjct 62 ASLSMVSAITPYVGWLSAVAAQAEETASQGRAAAAAFEAAFAMTVPPPVIAANRVLLATL 121 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 VATNFFGQNTPAIAATEAQY EMWAQDAAAMY YA ++ A+ L+PF A P TT+P + Sbjct 122 VATNFFGQNTPAIAATEAQYMEMWAQDAAAMYGYAAASQTASTLSPFAAPPNTTAPEGES 181 Query 181 GQAAATVSSTVPPLATTA----------AVPQLLQ-------------QLSSTSLIPWYS 217 QAAA + P +TA A PQ L S T W + Sbjct 182 DQAAAVSQAMAQPAGSTAQTAANTSSQLATPQALSAGTSQAATQASSSSASQTGPFTWLT 241 Query 218 ALQQWLAE--------NLLGLTPDNRMTIVRLL-GISYFDEGLLQFEASLAQQAIPGTPG 268 + Q L + N LGL+P +++ G+ YF G+ F + LAQQ + Sbjct 242 SALQNLQQSGLPTPTNNYLGLSPTFYTVMLKQTSGLGYFSNGITAFWSQLAQQLV----S 297 Query 269 GAGDSGSSVLDSWGPTIFAGPR-ASPSVAGGGAVGGVQTPQPYWYWALDRESIGGSVSAA 327 G G S + +W PT P+ AS + G+VGG S ++SA Sbjct 298 GPGGSTAGAGGAWYPT----PQFASLGLGNLGSVGGA--------------SHVSAISAG 339 Query 328 LGKGSSAGSLSVPPDWAARARWANPAAWR---LPGDDVTALRGTAENALLRGFPMASAGQ 384 G+ AG+LSVP WA +PA G A N LLRG P+ + G+ Sbjct 340 AGR---AGALSVPQQWATLTSAVSPAVSEEGSAVQAAAGGAPGGAANGLLRGMPVGALGR 396 Query 385 S-TGGGFVHKYGFRLAVMQRPPFAG 408 G+V+KYGFR +V+ RPP AG Sbjct 397 RGAAAGYVNKYGFRYSVLTRPPSAG 421 >gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [Mycobacterium marinum M] gi|183173551|gb|ACC38661.1| PPE family protein, PPE51_2 [Mycobacterium marinum M] Length=381 Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 181/422 (43%), Positives = 237/422 (57%), Gaps = 55/422 (13%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DF +LPPE+NSG MY GPG+G ++AAA +WD LA ELG A Y +S LT YWAGP Sbjct 1 MDFAMLPPEVNSGLMYTGPGAGSLLAAANSWDELAIELGTTAQTYESVLSGLTSMYWAGP 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SM A PYV WL +TA Q +Q Q RAAA A+E A+AMTVPPPV++ANR L++L Sbjct 61 ASESMAAKAAPYVWWLHSTAEQTQQTATQCRAAAMAFEQAYAMTVPPPVILANRMQLMSL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 VATNFFGQNT AIAA EAQYAEMW QDAAAMY YA SAA+A +L PF++ TT+PA L+ Sbjct 121 VATNFFGQNTAAIAALEAQYAEMWEQDAAAMYGYATSAAMAAQLVPFSSPQQTTNPAGLS 180 Query 181 GQAAAT-----VSSTVPPLATTAAVPQL-LQQLSST--SLIP-WYSALQQWLA-ENLLGL 230 Q+AA ++ PL+ A+ Q L L+ +L+P +S L A +G+ Sbjct 181 AQSAAVNQADATAAAANPLSDLIALVQKGLAALAGAFPNLLPDDFSILDGIFAGYATVGV 240 Query 231 TPDNRMTIVRLLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPR 290 + D I ++G + + G+L + + PG G SVL S Sbjct 241 SQDCESIIAGIIG-AESNLGMLGAASENPAELAPGDIGIG-----SVLSS---------- 284 Query 291 ASPSVAGGGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWA 350 +PSV GGAV G G+V ++G+ S G LSVP WAA A Sbjct 285 -APSV--GGAVSGP-----------------GAVLVSVGRAGSIGQLSVPASWAAPATRQ 324 Query 351 NPAAWRLPGDDVTALRGTAENAL----LRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPF 406 A L +T + GT E A + G P+ S+ +++ V +YG RL VM PP Sbjct 325 VAA---LSSAGLTTIPGTEEAAHGIPGMPGMPVGSSSRAS--SVVPRYGVRLTVMAHPPA 379 Query 407 AG 408 AG Sbjct 380 AG 381 >gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacterium marinum M] gi|183174804|gb|ACC39914.1| PPE family protein [Mycobacterium marinum M] Length=427 Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 152/280 (55%), Positives = 180/280 (65%), Gaps = 24/280 (8%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGPM+AAA WD LAAEL A GYR + LTG W GP Sbjct 1 MDFGALPPEINSGRMYVGPGSGPMLAAAVVWDELAAELYATAAGYRSTLDGLTGGSWRGP 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ASM AA PYVAW++ATA QAE AG QA+ AA+AYE AFA TVPPPV+ ANRALL+ L Sbjct 61 ASASMAAAAAPYVAWMTATAAQAELAGSQAKVAASAYETAFAATVPPPVIAANRALLMGL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 V TN FGQNTPAIAATEA YAEMWAQDAAAMYAYAGS+A AT++TPFT P TSP+ Sbjct 121 VFTNIFGQNTPAIAATEAHYAEMWAQDAAAMYAYAGSSATATQVTPFTEPPQITSPSGAV 180 Query 181 GQ-----------AAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLG 229 Q A++ +++ + PL A VP LQ + +TS P A + G Sbjct 181 SQAAAVTEAATASASSDITAQLSPL--IAVVPNALQGM-ATSGNP---------AAAIAG 228 Query 230 LTPDNRMTIVRLLGISYFDEGLLQFEASLAQQAIPGTPGG 269 L PD + + + F L + Q + G PGG Sbjct 229 L-PDVALPAGIITDLQNFTTILDTLDGPFTIQGLTGVPGG 267 >gi|308379035|ref|ZP_07484774.2| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358415|gb|EFP47266.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] Length=342 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 185/385 (49%), Positives = 222/385 (58%), Gaps = 43/385 (11%) Query 24 MMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAASMVAAVTPYVAWLSATAGQA 83 M+AAAAAWD +A ELGLAA GY I+ELTGA W G A+ SMVAA TPYVAWLS A +A Sbjct 1 MLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARA 60 Query 84 EQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATNFFGQNTPAIAATEAQYAEM 143 EQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L+ATNFFGQN+ AIA EAQYAEM Sbjct 61 EQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEM 120 Query 144 WAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAAATVSSTVPPLATTAAVPQL 203 WAQDA AMY YA ++A A+ L PF A P TT+ A + Q AA AA+P L Sbjct 121 WAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAV-----------AAMPGL 169 Query 204 LQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGISYFDEGLLQFEASLAQQAI 263 LQ+LSS + + W + WL L +TP R TIVRLLG SYF G+ QF AS+AQQ Sbjct 170 LQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLT 229 Query 264 PGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGVQTPQPYWYWALDRESIGGS 323 G G + + +W PT P AG GA + Sbjct 230 ----FGPGGTTAGSGGAWYPT--------PQFAGLGA--------------------SRA 257 Query 324 VSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTALRGTAENALLRGFPMASAG 383 VSA+L + + G+LSVPP W + T + LLRG P+ S Sbjct 258 VSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRI 317 Query 384 QSTGGGFVHKYGFRLAVMQRPPFAG 408 G F H+YGFR +V+ RPP AG Sbjct 318 TRRSGAFAHRYGFRHSVVARPPSAG 342 >gi|118618472|ref|YP_906804.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570582|gb|ABL05333.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=418 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 210/446 (48%), Positives = 247/446 (56%), Gaps = 67/446 (15%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 DFG LPPEINSGRMY GPGSGPMMAAA+AWD+LAAEL AA GY L I+ELT + W GP Sbjct 2 FDFGALPPEINSGRMYTGPGSGPMMAAASAWDALAAELSSAASGYSLVIAELTSSPWLGP 61 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SM++AV PYV WLSA A Q E A QARAAAAAYE AF MTVPPPV+ ANR LL+AL Sbjct 62 ASRSMMSAVAPYVTWLSAAAAQTETAASQARAAAAAYETAFVMTVPPPVIAANRVLLMAL 121 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 VATNFFGQNTPAIAATEAQY EMWAQDAAAMY+YAGS+A ATEL F P TTS A Sbjct 122 VATNFFGQNTPAIAATEAQYMEMWAQDAAAMYSYAGSSAPATELPRFAPPPDTTSVNAAG 181 Query 181 GQ--------------AAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSA-------- 218 GQ +A T+++T+P L ++A VP L Q+ S+ SA Sbjct 182 GQSAVVAQAAATPAGDSAQTITATIPQLLSSAGVPGLQQRSLSSVSSMSPSAASSPTVWQ 241 Query 219 LQQWLAENLL--GL-TPDNR--------MTIVRLLGISYFDEGLLQFEASLAQQAIPGTP 267 + Q +N L GL TPDN +R +YF G+ F S+AQQ Sbjct 242 IIQTQVQNFLTYGLPTPDNNYAGLYPGMYNALRQTLQAYFGVGIGNFGWSIAQQLT---- 297 Query 268 GGAGDSGSSVLDSWGPTIFAGPRASPSVAGGGAVGGVQTPQPYWYWALDRESIGGSVSAA 327 G G + + +W PT P A GA W+W A+ Sbjct 298 LGPGGTTAGAGGAWYPT--------PEFAALGA--------DTWHW---------HPMAS 332 Query 328 LGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDVTALRGTAE-----NALLRGFPMASA 382 S G LSVP W A+ +L + T G A NA LRGFP+ S Sbjct 333 FASSSKVGGLSVPASWGTTPGAVEQASTKLVSTNFTTSPGEANPANGLNAALRGFPVGSR 392 Query 383 GQSTGGGFVHKYGFRLAVMQRPPFAG 408 G G +YGFR V+ RPP AG Sbjct 393 GAQRTGNLGVRYGFRYPVLTRPPSAG 418 >gi|296167735|ref|ZP_06849952.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897078|gb|EFG76693.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=403 Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 196/433 (46%), Positives = 238/433 (55%), Gaps = 56/433 (12%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 DFG LPPEINSGRMY GPGSGPM+AAAAAWD LAAEL + A + +SELT A WAGP Sbjct 2 FDFGALPPEINSGRMYTGPGSGPMLAAAAAWDELAAELTMGASVFSSVLSELTSALWAGP 61 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ASM +AV PYV WL+A A +EQ QAR AAAA++ A+AMTVPP + ANR LL+ L Sbjct 62 ASASMASAVVPYVDWLAAVAYLSEQTASQARVAAAAFDAAYAMTVPPAEIAANRTLLMTL 121 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAAL- 179 VATNFFGQNTPAIAATE QY +MWAQDA AMY YAGS AIA +LTPF + P TT+P A Sbjct 122 VATNFFGQNTPAIAATETQYMQMWAQDAVAMYGYAGSLAIAGQLTPFASPPNTTTPDART 181 Query 180 -------------AGQAAATVSSTVPPLATTAAVPQLLQQLSST--------SLIPWYSA 218 AG A ++T P AT +VPQ L++T SLIP Sbjct 182 AQAAAVAQATETPAGNTAQMAATTTPQFATATSVPQASSTLATTGTSSSSLNSLIPG--- 238 Query 219 LQQWLAENLLGLTPDNRMTIVRLLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVL 278 N G P++ I L Y G AQQ + GT AG Sbjct 239 -----PNNWWGFQPNDYKIIFHDLLQEYNSYGTGYQAYQWAQQLVFGTGTTAGS------ 287 Query 279 DSWGPTIFAGPRASPSVA--GGGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGS 336 +W PT P A G G +G + + + + +E ++A G+ G+ Sbjct 288 GAWYPT--------PQFAHLGLGNIGSLSS-----FNGVSQE----GIAAGAGQAGKIGT 330 Query 337 LSVPPDWAARARWANPAAWRLPGDDV-TALRGTAENALLRGFPMASAGQSTGGGFVHKYG 395 LSVP WA +PA V TA A N LLRG P SAG+ ++KYG Sbjct 331 LSVPQSWATPVPQVHPAVTATETASVHTAANPAATNGLLRGIPNGSAGRRGSANALNKYG 390 Query 396 FRLAVMQRPPFAG 408 FR +V+ RPP AG Sbjct 391 FRHSVLTRPPSAG 403 >gi|41407603|ref|NP_960439.1| hypothetical protein MAP1505 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395956|gb|AAS03822.1| hypothetical protein MAP_1505 [Mycobacterium avium subsp. paratuberculosis K-10] Length=421 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 204/449 (46%), Positives = 247/449 (56%), Gaps = 70/449 (15%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 DFG LPPEINSGRMYAGPGSGP+MAAAAAWD +AAELG+AA GY I+ELT W GP Sbjct 2 FDFGALPPEINSGRMYAGPGSGPLMAAAAAWDEVAAELGIAASGYHSVIAELTSGPWVGP 61 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMV+A+TPYV WLSA A QAE+ Q RAAAAA+E AFAMTVPPPV+ ANR LL L Sbjct 62 ASLSMVSAITPYVGWLSAVAAQAEETASQGRAAAAAFEAAFAMTVPPPVIAANRVLLATL 121 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAAL- 179 VATNFFGQNTPAIAATEAQY EMWAQDAAAMY YA ++ A+ L+PF A P TT+P Sbjct 122 VATNFFGQNTPAIAATEAQYMEMWAQDAAAMYGYAAASQTASTLSPFAAPPNTTAPEGES 181 Query 180 -------------AGQAAATVSSTVPPLATTAAVPQLLQ-------------QLSSTSLI 213 AG +A T ++T LAT PQ L S T Sbjct 182 DQAAVVAQAAAEPAGNSAQTAANTSSQLAT----PQALSAGTSQAATQASSSSASQTGPF 237 Query 214 PWYSALQQWLAE--------NLLGLTPDNRMTIVRLL-GISYFDEGLLQFEASLAQQAIP 264 W ++ Q L + N LGL+P +++ G+ YF G+ F + LAQQ + Sbjct 238 TWLTSALQNLQQSGLPTPTNNYLGLSPTFYTVMLKQTSGLGYFSNGITAFWSQLAQQLV- 296 Query 265 GTPGGAGDSGSSVLDSWGPTIFAGPR-ASPSVAGGGAVGGVQTPQPYWYWALDRESIGGS 323 G G S + +W PT P+ A + G+VGG Sbjct 297 ---SGPGGSTAGAGGAWYPT----PQFAKLGLGNLGSVGGAS-----------------H 332 Query 324 VSAALGKGSSAGSLSVPPDWAARARWANPAAWR---LPGDDVTALRGTAENALLRGFPMA 380 VSA G+LSVP WA +PA G A N LLRG P+ Sbjct 333 VSATSAGAGRVGALSVPQQWATLTSAVSPAVSEEGSAVQAAAGGAPGGAANGLLRGMPVG 392 Query 381 SAGQS-TGGGFVHKYGFRLAVMQRPPFAG 408 + G+ G+V+KYGFR +V+ RPP AG Sbjct 393 ALGRRGAAAGYVNKYGFRYSVLTRPPSAG 421 >gi|336457651|gb|EGO36655.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=421 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 205/449 (46%), Positives = 249/449 (56%), Gaps = 70/449 (15%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 DFG LPPEINSGRMYAGPGSGP+MAAAAAWD +AAELG+AA GY I+ELT W GP Sbjct 2 FDFGALPPEINSGRMYAGPGSGPLMAAAAAWDEVAAELGIAASGYHSVIAELTSGPWVGP 61 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+ SMV+A+TPYV WLSA A QAE+ Q RAAAAA+E AFAMTVPPPV+ ANR LL L Sbjct 62 ASLSMVSAITPYVGWLSAVAAQAEETASQGRAAAAAFEAAFAMTVPPPVIAANRVLLATL 121 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSP---- 176 VATNFFGQNTPAIAATEAQY EMWAQDAAAMY YA ++ A+ L+PF A P TT+P Sbjct 122 VATNFFGQNTPAIAATEAQYMEMWAQDAAAMYGYAAASQTASTLSPFAAPPNTTAPEGES 181 Query 177 ----------AALAGQAAATVSSTVPPLATTAAVPQLLQ-------------QLSSTSLI 213 A AG +A T ++T LAT PQ L S T Sbjct 182 DQAAAVAQAAAEPAGNSAQTAANTSSQLAT----PQALSAGTSQAATQASSSSASQTGPF 237 Query 214 PWYSALQQWLAE--------NLLGLTPDNRMTIVRLL-GISYFDEGLLQFEASLAQQAIP 264 W ++ Q L + N LGL+P +++ G+ YF G+ F + LAQQ + Sbjct 238 TWLTSALQNLQQSGLPTPTNNYLGLSPTFYTVMLKQTSGLGYFSNGITAFWSQLAQQLV- 296 Query 265 GTPGGAGDSGSSVLDSWGPTIFAGPR-ASPSVAGGGAVGGVQTPQPYWYWALDRESIGGS 323 G G S + +W PT P+ A+ + G+VGG Sbjct 297 ---SGPGGSTAGAGGAWYPT----PQFANLGLGNLGSVGGAS-----------------H 332 Query 324 VSAALGKGSSAGSLSVPPDWAARARWANPAAWR---LPGDDVTALRGTAENALLRGFPMA 380 VSA G+LSVP WA +PA G A N LLRG P+ Sbjct 333 VSATSAGAGRVGALSVPQQWATLTSAVSPAVSEEGSAVQAAAGGAPGGAANGLLRGMPVG 392 Query 381 SAGQS-TGGGFVHKYGFRLAVMQRPPFAG 408 + G+ G+V+KYGFR +V+ RPP AG Sbjct 393 ALGRRGAAAGYVNKYGFRYSVLTRPPSAG 421 >gi|240167787|ref|ZP_04746446.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=377 Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 195/412 (48%), Positives = 233/412 (57%), Gaps = 63/412 (15%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DFG LPPEINSGRMY GPGSGP++AAA AWD+LAA++G AA GYR I+ELT W+GP Sbjct 25 IDFGALPPEINSGRMYTGPGSGPLIAAAGAWDALAADIGAAASGYRTVIAELTSLQWSGP 84 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 A+A+M+AAVTPYV WL ATA +AEQAGMQARAAAAAYE AFAMTVPPP++ ANR L+ L Sbjct 85 ASAAMLAAVTPYVTWLCATAARAEQAGMQARAAAAAYETAFAMTVPPPLIAANRVRLMVL 144 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 VATNFFGQNTP IA+TEA+YAE WAQDA AMYAYA S+A A+ LTPFTA P TTSP LA Sbjct 145 VATNFFGQNTPLIASTEAEYAEFWAQDATAMYAYASSSATASVLTPFTAPPNTTSPGGLA 204 Query 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSAL--QQWLAENLLGLTPDNRMTI 238 Q + AA Q L L PW+ + Q W A + Sbjct 205 EQGLSV---------GKAAAQQGLSALKR----PWFPIIPTQDWNA-------------L 238 Query 239 VRLLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRASPSVAGG 298 + G++YF G++Q AQQ IP +S S+ + +AGG Sbjct 239 INTWGLTYFGAGIVQLVTLFAQQLIP-------ESASATMP---------------IAGG 276 Query 299 GAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLP 358 A TP + ++ SA G+ GSLSVPP WA A A + Sbjct 277 AAPASALTP--------SQLAVARPASAVFGQADRLGSLSVPPSWATSLNPAKAGAAEIS 328 Query 359 GDDVTALRGTAENALLRGFPMASAGQSTGGGFV--HKYGFRLAVMQRPPFAG 408 T R A L FP G G +YG RL VM RPP AG Sbjct 329 HTVSTVGRTNAPRGL---FPNTPTGNDRRGATFARRRYGIRLTVMSRPPAAG 377 >gi|342859619|ref|ZP_08716272.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342132751|gb|EGT85971.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=458 Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 164/352 (47%), Positives = 204/352 (58%), Gaps = 32/352 (9%) Query 1 LDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 +DF VLPPE+NS RMYAGPGSGPM+AAA AWD +AA L A Y+ I+ LT W GP Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDEVAAALQTTANSYQAEITALTSGPWVGP 60 Query 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 ++A+MVAA+TPY+ W+ QAE+ QAR AA AYE AFA TVPPPVV ANR L AL Sbjct 61 SSAAMVAAITPYLEWMRTAGAQAEETANQARTAAFAYETAFAETVPPPVVTANRTQLAAL 120 Query 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTA-APVTTSPA-- 177 VATN GQNTPAIAATEA+Y EMWA+D AAM+ YAG+ A AT LTPF+ P + S A Sbjct 121 VATNVLGQNTPAIAATEAEYGEMWARDTAAMFGYAGTTASATRLTPFSQPDPTSNSGAGQ 180 Query 178 ----ALAGQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPD 233 A AG AA + +TV + +AVP L LS+ +L P +A+ A +LLGL D Sbjct 181 SEAVAQAGTAAGSTRNTV--QQSFSAVPNL---LSNAALSP--AAISPTSATDLLGLESD 233 Query 234 NRMTIVRLLGISYFDEGLLQFEASLAQQAIPGTPGGA--GDSGSSVLDSWGPTIFAGPRA 291 ++ + + L +A A+P GA G ++ W AG +A Sbjct 234 ----LIAIFLDAPASVAGLGIDAPGTLVALPFDVAGALTGFHTDDIVSGW-----AGVQA 284 Query 292 SPSVAGGGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDW 343 P G GAV P P+ G SA LG+ S+ G LSVPP W Sbjct 285 WP---GTGAV----PPSPFPVITNPAGGFGTLASAGLGQASTVGGLSVPPGW 329 Lambda K H 0.316 0.129 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 813232817712 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40