BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 21,062,489 sequences; 7,218,481,314 total letters Query= Rv2896c Rv2896c Conserved hypothetical protein 3205265:3206434 reverse MW:40100 Length=389 Score E Sequences producing significant alignments: (Bits) Value gi|15842439|ref|NP_337476.1| hypothetical protein MT2964 [Mycoba... 743 0.0 gi|15610033|ref|NP_217412.1| hypothetical protein Rv2896c [Mycob... 743 0.0 gi|358233050|dbj|GAA46542.1| hypothetical protein NCGM2209_3183 ... 742 0.0 gi|254365536|ref|ZP_04981581.1| conserved hypothetical protein [... 742 0.0 gi|340627886|ref|YP_004746338.1| hypothetical protein MCAN_29171... 741 0.0 gi|289444451|ref|ZP_06434195.1| conserved hypothetical protein [... 741 0.0 gi|31794072|ref|NP_856565.1| hypothetical protein Mb2920c [Mycob... 740 0.0 gi|306798827|ref|ZP_07437129.1| putative DNA protecting protein ... 738 0.0 gi|289448561|ref|ZP_06438305.1| smf family protein [Mycobacteriu... 700 0.0 gi|308375917|ref|ZP_07445533.2| hypothetical protein TMGG_02430 ... 649 0.0 gi|383823920|ref|ZP_09979108.1| hypothetical protein MXEN_03814 ... 540 2e-151 gi|183981827|ref|YP_001850118.1| hypothetical protein MMAR_1814 ... 538 8e-151 gi|118617634|ref|YP_905966.1| hypothetical protein MUL_2062 [Myc... 532 4e-149 gi|118463022|ref|YP_882921.1| smf family protein [Mycobacterium ... 521 1e-145 gi|408781897|ref|ZP_11193670.1| hypothetical protein MkanA1_1452... 518 1e-144 gi|400536985|ref|ZP_10800519.1| smf family protein [Mycobacteriu... 514 1e-143 gi|336459051|gb|EGO38001.1| DNA protecting protein DprA [Mycobac... 511 2e-142 gi|379763143|ref|YP_005349540.1| smf family protein [Mycobacteri... 510 2e-142 gi|41409059|ref|NP_961895.1| hypothetical protein MAP2961c [Myco... 510 3e-142 gi|387876969|ref|YP_006307273.1| smf family protein [Mycobacteri... 508 9e-142 gi|406031851|ref|YP_006730743.1| smf family protein [Mycobacteri... 508 1e-141 gi|379755597|ref|YP_005344269.1| smf family protein [Mycobacteri... 507 2e-141 gi|379748309|ref|YP_005339130.1| smf family protein [Mycobacteri... 506 4e-141 gi|333991257|ref|YP_004523871.1| hypothetical protein JDM601_261... 502 7e-140 gi|404423826|ref|ZP_11005450.1| hypothetical protein MFORT_25082... 476 3e-132 gi|404446912|ref|ZP_11012006.1| DNA protecting protein DprA [Myc... 476 4e-132 gi|357022060|ref|ZP_09084291.1| DNA protecting protein DprA [Myc... 465 8e-129 gi|353179736|gb|EHB45293.1| DNA protecting protein DprA [Mycobac... 464 1e-128 gi|383818750|ref|ZP_09974035.1| DNA protecting protein DprA [Myc... 457 2e-126 gi|126434555|ref|YP_001070246.1| DNA protecting protein DprA [My... 448 7e-124 gi|108798955|ref|YP_639152.1| DNA processing protein DprA [Mycob... 446 6e-123 gi|374608425|ref|ZP_09681224.1| DNA protecting protein DprA [Myc... 442 7e-122 gi|145224718|ref|YP_001135396.1| DNA protecting protein DprA [My... 436 4e-120 gi|407985960|ref|ZP_11166529.1| DNA protecting protein DprA [Myc... 431 1e-118 gi|392415817|ref|YP_006452422.1| DNA protecting protein DprA [My... 431 2e-118 gi|120403195|ref|YP_953024.1| transcriptional regulator TrmB [My... 427 2e-117 gi|375142813|ref|YP_005003462.1| DNA protecting protein DprA [My... 421 1e-115 gi|289763072|ref|ZP_06522450.1| smf family protein [Mycobacteriu... 420 2e-115 gi|363996404|gb|EHM17619.1| hypothetical protein MBOL_30440 [Myc... 400 2e-109 gi|397679967|ref|YP_006521502.1| hypothetical protein MYCMA_1760... 395 7e-108 gi|382945524|gb|EIC69818.1| hypothetical protein S7W_08113 [Myco... 395 9e-108 gi|169630293|ref|YP_001703942.1| hypothetical protein MAB_3212c ... 393 3e-107 gi|365871140|ref|ZP_09410681.1| hypothetical protein MMAS_30830 ... 392 7e-107 gi|254776194|ref|ZP_05217710.1| smf family protein [Mycobacteriu... 381 2e-103 gi|254820364|ref|ZP_05225365.1| smf family protein [Mycobacteriu... 368 1e-99 gi|296171474|ref|ZP_06852760.1| smf family protein [Mycobacteriu... 332 8e-89 gi|312139229|ref|YP_004006565.1| smf family protein [Rhodococcus... 323 4e-86 gi|325673466|ref|ZP_08153157.1| DNA protecting protein DprA [Rho... 322 9e-86 gi|407886682|emb|CCH34325.1| hypothetical protein BN6_70900 [Sac... 320 3e-85 gi|377567910|ref|ZP_09797112.1| DNA processing protein [Gordonia... 317 2e-84 >gi|15842439|ref|NP_337476.1| hypothetical protein MT2964 [Mycobacterium tuberculosis CDC1551] gi|148662740|ref|YP_001284263.1| hypothetical protein MRA_2921 [Mycobacterium tuberculosis H37Ra] gi|148824085|ref|YP_001288839.1| hypothetical protein TBFG_12910 [Mycobacterium tuberculosis F11] 70 more sequence titles Length=389 Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/389 (100%), Positives = 389/389 (100%), Gaps = 0/389 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR Sbjct 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA Sbjct 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV Sbjct 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA Sbjct 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG Sbjct 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 Query 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG Sbjct 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 Query 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 LAECRDGRWRILRAGAGQAAAKGAAARLV Sbjct 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 >gi|15610033|ref|NP_217412.1| hypothetical protein Rv2896c [Mycobacterium tuberculosis H37Rv] gi|2851412|sp|Q10817.2|Y2896_MYCTU RecName: Full=Uncharacterized protein Rv2896c/MT2964 gi|2529205|emb|CAA98374.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] Length=389 Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/389 (99%), Positives = 389/389 (100%), Gaps = 0/389 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR Sbjct 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA Sbjct 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 PRAAAVVGTRAATAYGEHVAADLAAGLAERDV+VVSGGAYGIDGAAHRAALDSEGITVAV Sbjct 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVSVVSGGAYGIDGAAHRAALDSEGITVAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA Sbjct 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG Sbjct 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 Query 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG Sbjct 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 Query 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 LAECRDGRWRILRAGAGQAAAKGAAARLV Sbjct 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 >gi|358233050|dbj|GAA46542.1| hypothetical protein NCGM2209_3183 [Mycobacterium tuberculosis NCGM2209] Length=389 Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/389 (99%), Positives = 388/389 (99%), Gaps = 0/389 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR Sbjct 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA Sbjct 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV Sbjct 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA Sbjct 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG Sbjct 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 Query 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 ELAGDEPRPG ALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG Sbjct 301 ELAGDEPRPGTALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 Query 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 LAECRDGRWRILRAGAGQAAAKGAAARLV Sbjct 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 >gi|254365536|ref|ZP_04981581.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|134151049|gb|EBA43094.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] Length=389 Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/389 (99%), Positives = 388/389 (99%), Gaps = 0/389 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR Sbjct 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA Sbjct 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV Sbjct 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 L GGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA Sbjct 181 LTGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG Sbjct 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 Query 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG Sbjct 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 Query 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 LAECRDGRWRILRAGAGQAAAKGAAARLV Sbjct 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 >gi|340627886|ref|YP_004746338.1| hypothetical protein MCAN_29171 [Mycobacterium canettii CIPT 140010059] gi|340006076|emb|CCC45248.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=389 Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/389 (99%), Positives = 388/389 (99%), Gaps = 0/389 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR Sbjct 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA Sbjct 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV Sbjct 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA Sbjct 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG Sbjct 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 Query 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG Sbjct 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 Query 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 LAECRDGRWRILRAG GQAAAKGAAARLV Sbjct 361 LAECRDGRWRILRAGGGQAAAKGAAARLV 389 >gi|289444451|ref|ZP_06434195.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289417370|gb|EFD14610.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=389 Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/389 (99%), Positives = 388/389 (99%), Gaps = 0/389 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR Sbjct 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA Sbjct 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV Sbjct 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA Sbjct 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG Sbjct 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 Query 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 ELAGDEPRPGAALDVLSEAERQVYE LPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG Sbjct 301 ELAGDEPRPGAALDVLSEAERQVYEGLPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 Query 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 LAECRDGRWRILRAGAGQAAAKGAAARLV Sbjct 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 >gi|31794072|ref|NP_856565.1| hypothetical protein Mb2920c [Mycobacterium bovis AF2122/97] gi|121638777|ref|YP_979001.1| hypothetical protein BCG_2917c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991269|ref|YP_002645958.1| hypothetical protein JTY_2912 [Mycobacterium bovis BCG str. Tokyo 172] 6 more sequence titles Length=389 Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/389 (99%), Positives = 388/389 (99%), Gaps = 0/389 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARR IDR Sbjct 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARRGIDR 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA Sbjct 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV Sbjct 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA Sbjct 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG Sbjct 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 Query 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG Sbjct 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 Query 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 LAECRDGRWRILRAGAGQAAAKGAAARLV Sbjct 361 LAECRDGRWRILRAGAGQAAAKGAAARLV 389 >gi|306798827|ref|ZP_07437129.1| putative DNA protecting protein DprA [Mycobacterium tuberculosis SUMu006] gi|308340905|gb|EFP29756.1| putative DNA protecting protein DprA [Mycobacterium tuberculosis SUMu006] Length=385 Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/385 (100%), Positives = 385/385 (100%), Gaps = 0/385 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR Sbjct 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA Sbjct 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV Sbjct 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA Sbjct 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG Sbjct 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 Query 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG Sbjct 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 Query 361 LAECRDGRWRILRAGAGQAAAKGAA 385 LAECRDGRWRILRAGAGQAAAKGAA Sbjct 361 LAECRDGRWRILRAGAGQAAAKGAA 385 >gi|289448561|ref|ZP_06438305.1| smf family protein [Mycobacterium tuberculosis CPHL_A] gi|289421519|gb|EFD18720.1| smf family protein [Mycobacterium tuberculosis CPHL_A] Length=376 Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/368 (100%), Positives = 368/368 (100%), Gaps = 0/368 (0%) Query 22 QLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELLMRRGGRLITPDDD 81 QLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELLMRRGGRLITPDDD Sbjct 9 QLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELLMRRGGRLITPDDD 68 Query 82 EWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVGTRAATAYGEHVAA 141 EWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVGTRAATAYGEHVAA Sbjct 69 EWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVGTRAATAYGEHVAA 128 Query 142 DLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIPYPAGHSALLHRIA 201 DLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIPYPAGHSALLHRIA Sbjct 129 DLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIPYPAGHSALLHRIA 188 Query 202 QHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGAANTAAWARALGRVVA 261 QHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGAANTAAWARALGRVVA Sbjct 189 QHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGAANTAAWARALGRVVA 248 Query 262 AVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGDEPRPGAALDVLSEAER 321 AVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGDEPRPGAALDVLSEAER Sbjct 249 AVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGDEPRPGAALDVLSEAER 308 Query 322 QVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDGRWRILRAGAGQAAA 381 QVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDGRWRILRAGAGQAAA Sbjct 309 QVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDGRWRILRAGAGQAAA 368 Query 382 KGAAARLV 389 KGAAARLV Sbjct 369 KGAAARLV 376 >gi|308375917|ref|ZP_07445533.2| hypothetical protein TMGG_02430 [Mycobacterium tuberculosis SUMu007] gi|308344817|gb|EFP33668.1| hypothetical protein TMGG_02430 [Mycobacterium tuberculosis SUMu007] Length=342 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/342 (99%), Positives = 342/342 (100%), Gaps = 0/342 (0%) Query 48 LAQHTGARREIDRAADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLV 107 +AQHTGARREIDRAADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLV Sbjct 1 MAQHTGARREIDRAADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLV 60 Query 108 LWALGPARLDEVAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAH 167 LWALGPARLDEVAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAH Sbjct 61 LWALGPARLDEVAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAH 120 Query 168 RAALDSEGITVAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRL 227 RAALDSEGITVAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRL Sbjct 121 RAALDSEGITVAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRL 180 Query 228 VAAVARAAVVVEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVT 287 VAAVARAAVVVEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVT Sbjct 181 VAAVARAAVVVEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVT 240 Query 288 RADDIVEFVGHIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPA 347 RADDIVEFVGHIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPA Sbjct 241 RADDIVEFVGHIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPA 300 Query 348 QVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV 389 QVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV Sbjct 301 QVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV 342 >gi|383823920|ref|ZP_09979108.1| hypothetical protein MXEN_03814 [Mycobacterium xenopi RIVM700367] gi|383338356|gb|EID16721.1| hypothetical protein MXEN_03814 [Mycobacterium xenopi RIVM700367] Length=390 Score = 540 bits (1392), Expect = 2e-151, Method: Compositional matrix adjust. Identities = 316/386 (82%), Positives = 337/386 (88%), Gaps = 3/386 (0%) Query 4 PTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAAD 63 PT RAWAYLSRVAEPPCA+LAALV+ VG VEAA+RVRRGQV + LA+ T ARREID+AA Sbjct 8 PTLRAWAYLSRVAEPPCAELAALVQRVGAVEAAERVRRGQVNDRLARRTEARREIDQAAA 67 Query 64 DLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRA 123 DLELL RRGGRLITPDDDEWPVLAFAAF GA RA+P G +P+VLWA GPARLDE A RA Sbjct 68 DLELLRRRGGRLITPDDDEWPVLAFAAFGGAAVRAKPQGRTPMVLWAQGPARLDETAHRA 127 Query 124 AAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAG 183 AAVVGTRAATAYGEHVAADLAAGL+E+ V VVSGGAYGIDG AHRAAL S+GIT+AVLAG Sbjct 128 AAVVGTRAATAYGEHVAADLAAGLSEKGVTVVSGGAYGIDGTAHRAALASDGITLAVLAG 187 Query 184 GFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLR 243 G DIPYPAGHSALLHRI HG+L TEYPPGVRPARHRFLTRNRLVAA A AAVVVEAGLR Sbjct 188 GIDIPYPAGHSALLHRIGGHGLLVTEYPPGVRPARHRFLTRNRLVAAFAGAAVVVEAGLR 247 Query 244 SGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELA 303 SGAANTAAWARALGRVV AVPGPVTSSASAGCH LLR GAE+VTR+DD+VE VG IGEL Sbjct 248 SGAANTAAWARALGRVVGAVPGPVTSSASAGCHALLRAGAEVVTRSDDVVELVGRIGELV 307 Query 304 GDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAE 363 DEPRP ALD LS+AERQVYEALPGRG ATIDEIAVGSGL PAQV GPLA+LEVAGLAE Sbjct 308 ADEPRPATALDALSDAERQVYEALPGRGGATIDEIAVGSGLAPAQVFGPLAMLEVAGLAE 367 Query 364 CRDGRWRILRAGAGQAAAKGAAARLV 389 R+GRWRI+R G QAA ARLV Sbjct 368 QREGRWRIVRVGTQQAAQT---ARLV 390 >gi|183981827|ref|YP_001850118.1| hypothetical protein MMAR_1814 [Mycobacterium marinum M] gi|183175153|gb|ACC40263.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=391 Score = 538 bits (1386), Expect = 8e-151, Method: Compositional matrix adjust. Identities = 294/387 (76%), Positives = 330/387 (86%), Gaps = 0/387 (0%) Query 3 DPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAA 62 D RAW YLSRVAEPPCA+LAALV+ VGPVEAA+R+RRGQV ELA+ T AR EIDRAA Sbjct 5 DGALRAWGYLSRVAEPPCAELAALVQRVGPVEAAERIRRGQVDGELARLTRARCEIDRAA 64 Query 63 DDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPR 122 DLE L RRGGRLITPDDDEWPV+AF AFSG+ RA+ G +P+ LW GPARLD+V R Sbjct 65 ADLEQLARRGGRLITPDDDEWPVVAFTAFSGSAIRAKGNGGAPMALWVQGPARLDQVVQR 124 Query 123 AAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLA 182 AAA+VGTRAATAYGEH+AADLAAGL ERDVAV+SGGAYGIDGAAHRA L +EG TVAVLA Sbjct 125 AAALVGTRAATAYGEHMAADLAAGLVERDVAVISGGAYGIDGAAHRAVLIAEGTTVAVLA 184 Query 183 GGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGL 242 GG DIPYP GHSALLHRI QHG+L TEYPPGVRPARHRFLTRNRLVAA+ AAVVVEAGL Sbjct 185 GGIDIPYPTGHSALLHRIGQHGLLVTEYPPGVRPARHRFLTRNRLVAALGGAAVVVEAGL 244 Query 243 RSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGEL 302 RSGAANTAAWARALGR+VAAVPGP TSSASAGCH LLR+GA+L+TRAD+IVE VG IGEL Sbjct 245 RSGAANTAAWARALGRIVAAVPGPATSSASAGCHVLLRNGAQLITRADEIVELVGRIGEL 304 Query 303 AGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLA 362 + ++ RP + LD LS++E QVYEALPGRGA ++DEIAV SGL+ QV+G LAILEVAGLA Sbjct 305 SLEQSRPTSVLDGLSQSESQVYEALPGRGAMSVDEIAVASGLVAEQVMGRLAILEVAGLA 364 Query 363 ECRDGRWRILRAGAGQAAAKGAAARLV 389 E GRWR++RAG + AA+G ARLV Sbjct 365 ERDGGRWRLVRAGRARPAAEGVRARLV 391 >gi|118617634|ref|YP_905966.1| hypothetical protein MUL_2062 [Mycobacterium ulcerans Agy99] gi|118569744|gb|ABL04495.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=391 Score = 532 bits (1371), Expect = 4e-149, Method: Compositional matrix adjust. Identities = 291/387 (76%), Positives = 327/387 (85%), Gaps = 0/387 (0%) Query 3 DPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAA 62 D RAW YLSRVAEPPCA+LAALV+ VGPVEAA+R+RRGQV ELA+ T AR EIDRAA Sbjct 5 DSALRAWGYLSRVAEPPCAELAALVQRVGPVEAAERIRRGQVDGELARLTRARCEIDRAA 64 Query 63 DDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPR 122 DLE RRGGRLITPDDDEWPV+AF AFSG+ RA+ G +P+ LW GPARLD+V R Sbjct 65 ADLEQRARRGGRLITPDDDEWPVVAFTAFSGSAIRAKGNGGAPMALWVQGPARLDQVVQR 124 Query 123 AAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLA 182 AA+VGTRAATAYGEH+AADLAAGL ERDVAV+SGGAYGIDGAAHRA L +EG TVAVLA Sbjct 125 TAALVGTRAATAYGEHMAADLAAGLVERDVAVISGGAYGIDGAAHRAVLIAEGTTVAVLA 184 Query 183 GGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGL 242 GG DIPYP GHSALLH I QHG+L TEYPPGVRPARHRFLTRNRLVAA+ AAVVVEAGL Sbjct 185 GGIDIPYPTGHSALLHWIGQHGLLVTEYPPGVRPARHRFLTRNRLVAALGGAAVVVEAGL 244 Query 243 RSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGEL 302 RSGAANTAAWARALGR+VAAVPGP TSSASAGCH LLR+GA+L+TRAD+IVE VG IGEL Sbjct 245 RSGAANTAAWARALGRIVAAVPGPATSSASAGCHVLLRNGAQLITRADEIVELVGRIGEL 304 Query 303 AGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLA 362 + ++ RP + LD LS++E QVYEALPGRGA ++DEIAV SGL+ QV+G LAILEVAGLA Sbjct 305 SLEQSRPTSVLDGLSQSESQVYEALPGRGAMSVDEIAVASGLVAEQVMGRLAILEVAGLA 364 Query 363 ECRDGRWRILRAGAGQAAAKGAAARLV 389 E GRWR++RAG + AA+G ARLV Sbjct 365 ERDGGRWRLVRAGRSRPAAEGVRARLV 391 >gi|118463022|ref|YP_882921.1| smf family protein [Mycobacterium avium 104] gi|118164309|gb|ABK65206.1| smf family protein [Mycobacterium avium 104] Length=388 Score = 521 bits (1341), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 292/376 (78%), Positives = 321/376 (86%), Gaps = 7/376 (1%) Query 3 DPTA-RAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRA 61 DP A RAWAYLSRVAEPPC L ALVR VGPVEAA+RVRR V + LA+HT ARREIDRA Sbjct 5 DPRALRAWAYLSRVAEPPCPGLGALVRRVGPVEAAERVRRAAVDDALAKHTEARREIDRA 64 Query 62 ADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSP----LVLWALGPARLD 117 A DLEL+ RRGGRL+TPDDDEWPVLAFAAF A RP G +P LVLWA GPARLD Sbjct 65 AADLELIARRGGRLVTPDDDEWPVLAFAAFGAA--TPRPPGTAPMLAPLVLWAQGPARLD 122 Query 118 EVAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGIT 177 EVA RAAAVVGTRAATAYGE VA DL AGL +RDVAVVSGGAYGIDGAAHRAALD +G+T Sbjct 123 EVAHRAAAVVGTRAATAYGEQVAGDLVAGLVQRDVAVVSGGAYGIDGAAHRAALDCDGVT 182 Query 178 VAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVV 237 VAVLAGG D+ YP+GHSALLHRI QHG+LFTEY PGVRPAR+RFLTRNRLVAA+A A VV Sbjct 183 VAVLAGGLDVAYPSGHSALLHRIGQHGLLFTEYAPGVRPARYRFLTRNRLVAAMAGATVV 242 Query 238 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVG 297 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCH LLR+GAEL+TRA+ +VE +G Sbjct 243 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHALLRNGAELITRAEHVVELIG 302 Query 298 HIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILE 357 HIGELA +EP P LD L EAER+VYEALPGRGAAT++++A G GLLP Q LGPLA+LE Sbjct 303 HIGELAAEEPHPVTPLDGLGEAERRVYEALPGRGAATVEQLAAGCGLLPEQALGPLAMLE 362 Query 358 VAGLAECRDGRWRILR 373 +AGL +DGRWRI+R Sbjct 363 LAGLVRRQDGRWRIVR 378 >gi|408781897|ref|ZP_11193670.1| hypothetical protein MkanA1_14520 [Mycobacterium kansasii ATCC 12478] Length=385 Score = 518 bits (1334), Expect = 1e-144, Method: Compositional matrix adjust. Identities = 302/376 (81%), Positives = 329/376 (88%), Gaps = 0/376 (0%) Query 8 AWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLEL 67 AWAYLSRVAEPPCA+LAALVR VGP+EAADRVRRGQV +LA+HT ARR IDRAA DL+L Sbjct 7 AWAYLSRVAEPPCAELAALVRRVGPLEAADRVRRGQVDGDLARHTQARRGIDRAAADLDL 66 Query 68 LMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVV 127 LMRRGGRLITPDDDEWPVLAFAAF G+ ARA+P +P+VLWA GPARLDEV R AA+V Sbjct 67 LMRRGGRLITPDDDEWPVLAFAAFGGSAARAKPYSGAPMVLWARGPARLDEVVSRGAAIV 126 Query 128 GTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDI 187 GTRAATAYGEH+AADLAAGLAE DVAV+SGGAYGIDGAAHRAAL+ +G TVAVLAGG D+ Sbjct 127 GTRAATAYGEHIAADLAAGLAEHDVAVISGGAYGIDGAAHRAALNCDGTTVAVLAGGIDV 186 Query 188 PYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGAA 247 PYPAGHS+LLHRI +HG+L TEYPPGVRPAR+RFLTRNRLVAAVA AAVVVEAGLRSGAA Sbjct 187 PYPAGHSSLLHRIGEHGLLITEYPPGVRPARYRFLTRNRLVAAVAGAAVVVEAGLRSGAA 246 Query 248 NTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGDEP 307 NTAAWARALGR V AVPG VTSSASAGCH LLR GAEL+TRADDIVE VGH+GELA ++P Sbjct 247 NTAAWARALGRAVGAVPGSVTSSASAGCHVLLRDGAELITRADDIVELVGHMGELAAEQP 306 Query 308 RPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDG 367 RPG D LSEAER+VYEALPGRGAAT+DEIA SGLLP QVLG LAILEV GLA DG Sbjct 307 RPGTLFDGLSEAERRVYEALPGRGAATVDEIAAASGLLPEQVLGQLAILEVTGLARRDDG 366 Query 368 RWRILRAGAGQAAAKG 383 RWRI+RA +A G Sbjct 367 RWRIVRADRARAGFSG 382 >gi|400536985|ref|ZP_10800519.1| smf family protein [Mycobacterium colombiense CECT 3035] gi|400329998|gb|EJO87497.1| smf family protein [Mycobacterium colombiense CECT 3035] Length=391 Score = 514 bits (1324), Expect = 1e-143, Method: Compositional matrix adjust. Identities = 296/383 (78%), Positives = 331/383 (87%), Gaps = 5/383 (1%) Query 3 DPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAA 62 DP RAWAYLSRVAEPPCA+LAALVR VGPVEAA+RVRRG V ++LA+ T ARREID AA Sbjct 7 DPALRAWAYLSRVAEPPCAELAALVRHVGPVEAAERVRRGVVDDDLARRTEARREIDCAA 66 Query 63 DDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGH---SPLVLWALGPARLDEV 119 DLE+L RRGGRLITP+DDEWP+LAFAAF GA R P G +P+ +WA GP RLDEV Sbjct 67 ADLEMLARRGGRLITPNDDEWPLLAFAAFRGAAPR--PGGAPMVAPMAVWAQGPVRLDEV 124 Query 120 APRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVA 179 A RAAAVVGTRA+T YGEHVA DLAAGLA+RDVAVVSGGAYGIDGAAHRA LD +G+TVA Sbjct 125 AHRAAAVVGTRASTTYGEHVAGDLAAGLAQRDVAVVSGGAYGIDGAAHRAVLDCDGVTVA 184 Query 180 VLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVE 239 VLAGG D+PYP+GH+ALLHRI QHG++FTEY PG+RPARHRFLTRNRLVAAVA AAVVVE Sbjct 185 VLAGGLDVPYPSGHTALLHRIGQHGLVFTEYAPGIRPARHRFLTRNRLVAAVAGAAVVVE 244 Query 240 AGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHI 299 AGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCH LLR+GAELVTRAD +VE VG I Sbjct 245 AGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHALLRNGAELVTRADHVVELVGRI 304 Query 300 GELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVA 359 GELA DEP P LD LS+AER+VYEALPGRGAAT+DEIAV SG++P LGPLA+LE+A Sbjct 305 GELAHDEPHPATPLDGLSDAERRVYEALPGRGAATVDEIAVASGMVPELALGPLAMLELA 364 Query 360 GLAECRDGRWRILRAGAGQAAAK 382 GL + +DGRWR++R A QAA+ Sbjct 365 GLVQRQDGRWRLVRGAAAQAAST 387 >gi|336459051|gb|EGO38001.1| DNA protecting protein DprA [Mycobacterium avium subsp. paratuberculosis S397] Length=388 Score = 511 bits (1315), Expect = 2e-142, Method: Compositional matrix adjust. Identities = 294/376 (79%), Positives = 322/376 (86%), Gaps = 7/376 (1%) Query 3 DPTA-RAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRA 61 DP A RAWAYLSRVAEPPC L ALVR VGPVEAADRVRR V + LA+HT ARREIDRA Sbjct 5 DPRALRAWAYLSRVAEPPCPGLGALVRRVGPVEAADRVRRAAVDDALAKHTEARREIDRA 64 Query 62 ADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSP----LVLWALGPARLD 117 A DLEL+ RRGGRL+TPDDDEWPVLAFAAF A RP G +P LVLWA GPARLD Sbjct 65 AADLELIARRGGRLVTPDDDEWPVLAFAAFGAA--APRPPGTAPMLAPLVLWAQGPARLD 122 Query 118 EVAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGIT 177 EVA RAAAVVGTRAATAYGE VA DL AGLA+RDVAVVSGGAYGIDGAAHRAALD +G+T Sbjct 123 EVAHRAAAVVGTRAATAYGEQVAGDLVAGLAQRDVAVVSGGAYGIDGAAHRAALDCDGVT 182 Query 178 VAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVV 237 VAVLAGG D+ YP+GHSALLHRI QHG+LFTEY PGVRPAR+RFLTRNRLVAA+A A VV Sbjct 183 VAVLAGGLDVAYPSGHSALLHRIGQHGLLFTEYAPGVRPARYRFLTRNRLVAAMAGATVV 242 Query 238 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVG 297 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCH LLR+GAEL+TRA+ +VE +G Sbjct 243 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHALLRNGAELITRAEHVVELIG 302 Query 298 HIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILE 357 HIGELA +EP P LD L EAER+VYEALPGRGAAT++++A G GLLP Q LGPLA+LE Sbjct 303 HIGELAAEEPHPVTPLDGLGEAERRVYEALPGRGAATVEQLAAGCGLLPEQALGPLAMLE 362 Query 358 VAGLAECRDGRWRILR 373 +AGL +DGRWRI+R Sbjct 363 LAGLVRRQDGRWRIVR 378 >gi|379763143|ref|YP_005349540.1| smf family protein [Mycobacterium intracellulare MOTT-64] gi|378811085|gb|AFC55219.1| smf family protein [Mycobacterium intracellulare MOTT-64] Length=389 Score = 510 bits (1314), Expect = 2e-142, Method: Compositional matrix adjust. Identities = 304/376 (81%), Positives = 331/376 (89%), Gaps = 2/376 (0%) Query 7 RAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLE 66 RAWAYLSRVAEPPCA LAAL R VGPVEAA+RVRRG V + LA+HT ARR+ID +A DLE Sbjct 12 RAWAYLSRVAEPPCAGLAALARRVGPVEAAERVRRGAVDDVLARHTEARRDIDTSAADLE 71 Query 67 LLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAV 126 + RRGGRLITPDDDEWPVLAFAAF GA AR R G P+VLWA GPARLDEVA RAAAV Sbjct 72 AIARRGGRLITPDDDEWPVLAFAAFGGAEARRR--GGPPMVLWAQGPARLDEVAQRAAAV 129 Query 127 VGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFD 186 VGTRA+TAYGE +AA+LAA LA+RDVAVVSGGAYGIDGAAHRA LD +GITVAVLAGG D Sbjct 130 VGTRASTAYGEQMAAELAADLAQRDVAVVSGGAYGIDGAAHRAVLDCDGITVAVLAGGLD 189 Query 187 IPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGA 246 +PYPAGH+ALLHRI QHG+LFTEY PGVRPARHRFLTRNRLVAAV+ AAVVVEAGLRSGA Sbjct 190 VPYPAGHTALLHRIGQHGLLFTEYAPGVRPARHRFLTRNRLVAAVSGAAVVVEAGLRSGA 249 Query 247 ANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGDE 306 ANTAAWARALGRVVAAVPGPVTSSASAGCH LLR GAELVTRA+ IVE +GHIGELA DE Sbjct 250 ANTAAWARALGRVVAAVPGPVTSSASAGCHALLRDGAELVTRAEHIVELIGHIGELAPDE 309 Query 307 PRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRD 366 PRP LD LSEAER+VYEALPGRGAAT+DEIAV SGL+P QVLGPLA+LE+AGL + +D Sbjct 310 PRPVTPLDGLSEAERRVYEALPGRGAATVDEIAVASGLVPEQVLGPLAMLELAGLVQRQD 369 Query 367 GRWRILRAGAGQAAAK 382 G WRI+RA AG AA+ Sbjct 370 GLWRIVRATAGHAAST 385 >gi|41409059|ref|NP_961895.1| hypothetical protein MAP2961c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397418|gb|AAS05278.1| hypothetical protein MAP_2961c [Mycobacterium avium subsp. paratuberculosis K-10] Length=388 Score = 510 bits (1313), Expect = 3e-142, Method: Compositional matrix adjust. Identities = 293/376 (78%), Positives = 321/376 (86%), Gaps = 7/376 (1%) Query 3 DPTA-RAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRA 61 DP A RAWAYLSRVAEPPC L ALVR VGPVEAADRVRR V + LA+HT ARREIDRA Sbjct 5 DPRALRAWAYLSRVAEPPCPGLGALVRRVGPVEAADRVRRAAVDDALAKHTEARREIDRA 64 Query 62 ADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSP----LVLWALGPARLD 117 A DLEL+ RRGGRL+TPDDDEWPVLAFAAF A RP G +P LVLWA GPARLD Sbjct 65 AADLELIARRGGRLVTPDDDEWPVLAFAAFGAA--APRPPGTAPMLAPLVLWAQGPARLD 122 Query 118 EVAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGIT 177 EVA RAAAVVGTRAATAYGE VA DL AGL +RDVAVVSGGAYGIDGAAHRAALD +G+T Sbjct 123 EVAHRAAAVVGTRAATAYGEQVAGDLVAGLVQRDVAVVSGGAYGIDGAAHRAALDCDGVT 182 Query 178 VAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVV 237 VAVLAGG D+ YP+GHSALLHRI QHG+LFTEY PGVRPAR+RFLTRNRLVAA+A A VV Sbjct 183 VAVLAGGLDVAYPSGHSALLHRIGQHGLLFTEYAPGVRPARYRFLTRNRLVAAMAGATVV 242 Query 238 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVG 297 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCH LLR+GAEL+TRA+ +VE +G Sbjct 243 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHALLRNGAELITRAEHVVELIG 302 Query 298 HIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILE 357 HIGELA +EP P LD L EAER+VYEALPGRGAAT++++A G GLLP Q LGPLA+LE Sbjct 303 HIGELAAEEPHPVTPLDGLGEAERRVYEALPGRGAATVEQLAAGCGLLPEQALGPLAMLE 362 Query 358 VAGLAECRDGRWRILR 373 +AGL +DGRWRI+R Sbjct 363 LAGLVRRQDGRWRIVR 378 >gi|387876969|ref|YP_006307273.1| smf family protein [Mycobacterium sp. MOTT36Y] gi|386790427|gb|AFJ36546.1| smf family protein [Mycobacterium sp. MOTT36Y] Length=390 Score = 508 bits (1308), Expect = 9e-142, Method: Compositional matrix adjust. Identities = 288/370 (78%), Positives = 320/370 (87%), Gaps = 2/370 (0%) Query 7 RAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLE 66 RAWAYLSRVAEPPC+ LAALVRCVGPVEAA+RVRRG V ++LA+HT ARR+ID +A DLE Sbjct 11 RAWAYLSRVAEPPCSGLAALVRCVGPVEAAERVRRGSVDDDLARHTRARRDIDTSAADLE 70 Query 67 LLMRRGGRLITPDDDEWPVLAFAAFSGAGARAR--PCGHSPLVLWALGPARLDEVAPRAA 124 ++ RRGGRLITPDDDEWP+L FA F GA R R P P+VLWA GPARLD+VA RAA Sbjct 71 MIARRGGRLITPDDDEWPLLPFAGFHGAEPRRRGGPPMVPPMVLWAQGPARLDDVAQRAA 130 Query 125 AVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGG 184 AVVGTRA+T+YGE VA +LAA LA+RDVAVVSGGAYGID AAHRA L+ +GITVAVLAGG Sbjct 131 AVVGTRASTSYGERVAGELAADLAQRDVAVVSGGAYGIDSAAHRAVLECDGITVAVLAGG 190 Query 185 FDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRS 244 D+PYP+GH+ALLHRI QHG++FTEY PGVRPARHRFLTRNRLVAA A AAVVVEAGLRS Sbjct 191 LDVPYPSGHTALLHRIGQHGLVFTEYAPGVRPARHRFLTRNRLVAAAAGAAVVVEAGLRS 250 Query 245 GAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAG 304 GAANTAAWARALGRVVAAVPGPVTSSASAGCH LLR GAELVTRAD IVE +GHIGELA Sbjct 251 GAANTAAWARALGRVVAAVPGPVTSSASAGCHALLRDGAELVTRADHIVELIGHIGELAS 310 Query 305 DEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAEC 364 DEPRP LD LS+ E +VYEALPGRG AT+DEIA SGL+P QVLGPLA+LE+AGL Sbjct 311 DEPRPVTPLDGLSDTEHRVYEALPGRGGATVDEIAAASGLMPEQVLGPLAMLELAGLLRR 370 Query 365 RDGRWRILRA 374 +DGRWRI+RA Sbjct 371 QDGRWRIVRA 380 >gi|406031851|ref|YP_006730743.1| smf family protein [Mycobacterium indicus pranii MTCC 9506] gi|405130398|gb|AFS15653.1| smf family protein [Mycobacterium indicus pranii MTCC 9506] Length=389 Score = 508 bits (1307), Expect = 1e-141, Method: Compositional matrix adjust. Identities = 302/380 (80%), Positives = 330/380 (87%), Gaps = 2/380 (0%) Query 3 DPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAA 62 P RAWAYLSRVAEPPCA LAAL R VGPVEAA+RVRRG V + L +HT ARR+ID +A Sbjct 8 QPALRAWAYLSRVAEPPCAGLAALARRVGPVEAAERVRRGAVDDVLTRHTEARRDIDTSA 67 Query 63 DDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPR 122 DLE + RRGGRLITPDDDEWPVLAFAAF GA AR R G P+VLWA GPARLDEVA R Sbjct 68 ADLEAIARRGGRLITPDDDEWPVLAFAAFGGAEARRR--GGPPMVLWAQGPARLDEVAQR 125 Query 123 AAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLA 182 AAAVVGTRA+TAYGEH+AA+LAA LA+RDVAVVSGGAYGIDGAAHRA LD +GITVAVLA Sbjct 126 AAAVVGTRASTAYGEHMAAELAADLAQRDVAVVSGGAYGIDGAAHRAVLDCDGITVAVLA 185 Query 183 GGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGL 242 GG D+PYPAGH+ALLHRI QHG+LFTEY PGVRPARHRFLTRNRLVAAV+ AAVVVEAGL Sbjct 186 GGLDVPYPAGHTALLHRIGQHGLLFTEYAPGVRPARHRFLTRNRLVAAVSGAAVVVEAGL 245 Query 243 RSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGEL 302 RSGAANTAAWARALGRVVAAVPGPVTSSASAGCH LLR GAEL+TRA+ IVE +GHIGEL Sbjct 246 RSGAANTAAWARALGRVVAAVPGPVTSSASAGCHALLRDGAELITRAEHIVELIGHIGEL 305 Query 303 AGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLA 362 A DEPRP LD LSEAE +VYEALPGRGAAT+DEIAV SGL+P Q LGPLA+LE+AGL Sbjct 306 AQDEPRPVTPLDGLSEAECRVYEALPGRGAATVDEIAVASGLVPEQALGPLAMLELAGLV 365 Query 363 ECRDGRWRILRAGAGQAAAK 382 + +DG WRI+RA AG AA+ Sbjct 366 QRQDGLWRIVRATAGHAAST 385 >gi|379755597|ref|YP_005344269.1| smf family protein [Mycobacterium intracellulare MOTT-02] gi|378805813|gb|AFC49948.1| smf family protein [Mycobacterium intracellulare MOTT-02] Length=389 Score = 507 bits (1305), Expect = 2e-141, Method: Compositional matrix adjust. Identities = 302/376 (81%), Positives = 329/376 (88%), Gaps = 2/376 (0%) Query 7 RAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLE 66 RAWAYLSRVAEPPCA LAAL R VGPVEAA+RVRRG V LA+HT ARR+ID +A DLE Sbjct 12 RAWAYLSRVAEPPCAGLAALARRVGPVEAAERVRRGAVDGVLARHTEARRDIDTSAADLE 71 Query 67 LLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAV 126 + RRGGRLITPDDDEWPVLAFAAF GA AR R G P+VLWA GPARL EVA RAAAV Sbjct 72 AIARRGGRLITPDDDEWPVLAFAAFGGAEARRR--GGPPMVLWAQGPARLYEVAQRAAAV 129 Query 127 VGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFD 186 VGTRA+TAYGEH+AA+LAA LA+RDVAVVSGGAYGIDGAAHRA LD +GITVAVLAGG D Sbjct 130 VGTRASTAYGEHMAAELAADLAQRDVAVVSGGAYGIDGAAHRAVLDCDGITVAVLAGGLD 189 Query 187 IPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGA 246 +PYPAGH+ALLHRI QHG+LFTEY PGVRPARHRFLTRNRLVAAV+ AAVVVEAGLRSGA Sbjct 190 VPYPAGHTALLHRIGQHGLLFTEYAPGVRPARHRFLTRNRLVAAVSGAAVVVEAGLRSGA 249 Query 247 ANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGDE 306 ANTAAWARALGRVVAAVPGPVTSSASAGCH LLR GAEL+TRA+ IVE +GHIGELA DE Sbjct 250 ANTAAWARALGRVVAAVPGPVTSSASAGCHALLRDGAELITRAEHIVELIGHIGELAQDE 309 Query 307 PRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRD 366 PRP LD LSEAER+VYEALPGRGAAT+DEIAV SGL+P Q LGPLA+LE+AGL + +D Sbjct 310 PRPVTPLDGLSEAERRVYEALPGRGAATVDEIAVASGLVPEQALGPLAMLELAGLVQRQD 369 Query 367 GRWRILRAGAGQAAAK 382 G WRI+RA AG AA+ Sbjct 370 GLWRIVRATAGHAAST 385 >gi|379748309|ref|YP_005339130.1| smf family protein [Mycobacterium intracellulare ATCC 13950] gi|378800673|gb|AFC44809.1| smf family protein [Mycobacterium intracellulare ATCC 13950] Length=389 Score = 506 bits (1302), Expect = 4e-141, Method: Compositional matrix adjust. Identities = 302/376 (81%), Positives = 329/376 (88%), Gaps = 2/376 (0%) Query 7 RAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLE 66 RAWAYLSRVAEPPCA LAAL R VGPVEAA+RVRRG V + LA+HT ARR+ID +A DLE Sbjct 12 RAWAYLSRVAEPPCAGLAALARRVGPVEAAERVRRGAVDDVLARHTEARRDIDTSAADLE 71 Query 67 LLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAV 126 + RRGGRLITPDDDEWPVLAFAAF GA AR R G P+VLWA GPARLDEVA RAAAV Sbjct 72 AIARRGGRLITPDDDEWPVLAFAAFGGAEARRR--GGPPMVLWAQGPARLDEVAQRAAAV 129 Query 127 VGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFD 186 VGTRA+TAYGE +AA+LAA LA+RDVAVVSGGAYGIDGAAHRA LD +GITVAVLAGG D Sbjct 130 VGTRASTAYGEQMAAELAADLAQRDVAVVSGGAYGIDGAAHRAVLDCDGITVAVLAGGLD 189 Query 187 IPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGA 246 +PYPAGH+ALLHRI Q G+LFTEY PGVRPARHRFLTRNRLVAAV+ AAVVVEAGLRSGA Sbjct 190 VPYPAGHTALLHRIGQQGLLFTEYAPGVRPARHRFLTRNRLVAAVSGAAVVVEAGLRSGA 249 Query 247 ANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGDE 306 ANTAAWARALGRVVAAVPGPVTSSASAGCH LLR GAELVTRA+ IVE +GHIGELA DE Sbjct 250 ANTAAWARALGRVVAAVPGPVTSSASAGCHALLRDGAELVTRAEHIVELIGHIGELAPDE 309 Query 307 PRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRD 366 PRP LD LSEAER+VYEALPGRGAAT+DEIAV SGL+P Q LGPLA+LE+AGL + +D Sbjct 310 PRPVTPLDGLSEAERRVYEALPGRGAATVDEIAVASGLVPEQALGPLAMLELAGLVQRQD 369 Query 367 GRWRILRAGAGQAAAK 382 G WRI+RA AG AA+ Sbjct 370 GLWRIVRATAGHAAST 385 >gi|333991257|ref|YP_004523871.1| hypothetical protein JDM601_2617 [Mycobacterium sp. JDM601] gi|333487225|gb|AEF36617.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=378 Score = 502 bits (1292), Expect = 7e-140, Method: Compositional matrix adjust. Identities = 276/369 (75%), Positives = 307/369 (84%), Gaps = 0/369 (0%) Query 5 TARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADD 64 T RAWAYLSRVAEPP +LAALV GPVEAA R+R G V ELA++T ARREID AA+D Sbjct 7 TLRAWAYLSRVAEPPRPELAALVARAGPVEAAKRIRCGDVEPELAKYTEARREIDSAAED 66 Query 65 LELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAA 124 LEL+ RRGGRL+TPDDDEWP+LAFAAF GA A +P +PLVLWA+GPARLDE+A RA Sbjct 67 LELVARRGGRLVTPDDDEWPLLAFAAFGGAAAARKPDCRAPLVLWAVGPARLDEIAERAT 126 Query 125 AVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGG 184 A+VGTRAATAYGE VAADLAAGL ERD+AVVSGGAYGIDGAAHRA L ++G TVAVLAGG Sbjct 127 AIVGTRAATAYGELVAADLAAGLVERDMAVVSGGAYGIDGAAHRATLAADGTTVAVLAGG 186 Query 185 FDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRS 244 DI YPAGHSALLHRI +G+L TEYPPGVRP RHRFLTRNRLVAA+A A VVVEAG+RS Sbjct 187 IDISYPAGHSALLHRIGGNGLLVTEYPPGVRPVRHRFLTRNRLVAALAGATVVVEAGVRS 246 Query 245 GAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAG 304 GAANTAAWAR LGR VAAVPGP+TS+ASAGCH LLR GAELVTR D++VE G +GELA Sbjct 247 GAANTAAWARLLGRPVAAVPGPITSAASAGCHVLLRAGAELVTRPDEVVELAGRVGELAD 306 Query 305 DEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAEC 364 P P LD LS A RQVYEALPGRG AT+D++A+ SGL PAQV GPLA+LEVAGL E Sbjct 307 VPPHPVTPLDGLSAAGRQVYEALPGRGVATVDQVAIASGLAPAQVFGPLAMLEVAGLVER 366 Query 365 RDGRWRILR 373 RDG W I+R Sbjct 367 RDGSWAIVR 375 >gi|404423826|ref|ZP_11005450.1| hypothetical protein MFORT_25082 [Mycobacterium fortuitum subsp. fortuitum DSM 46621] gi|403653052|gb|EJZ08057.1| hypothetical protein MFORT_25082 [Mycobacterium fortuitum subsp. fortuitum DSM 46621] Length=376 Score = 476 bits (1226), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 258/374 (69%), Positives = 284/374 (76%), Gaps = 1/374 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 M D RAWAYLSRVAEPPCA+L A V VGPVEAA RV+ G V EL ARRE D Sbjct 1 MTDEVRRAWAYLSRVAEPPCAELTAFVAQVGPVEAAGRVKSGDVVPELLSRVEARREFDC 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFS-GAGARARPCGHSPLVLWALGPARLDEV 119 A DLE+L R GGRLITP DDEWP+L F A R R H PLVLWA GPARLDEV Sbjct 61 AVRDLEVLDRMGGRLITPGDDEWPLLRFRALGVKKDDRKRANAHPPLVLWASGPARLDEV 120 Query 120 APRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVA 179 RAAA+VGTRAATAYGEHV ADLAAGL ERDV VVSGGAYGIDGAAHRAAL EG+TVA Sbjct 121 TERAAAIVGTRAATAYGEHVTADLAAGLVERDVTVVSGGAYGIDGAAHRAALACEGMTVA 180 Query 180 VLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVE 239 ++AGG D PYPAGHSAL HRI Q +L +EYPPGV P R RFLTRNRLVAA++ A VVVE Sbjct 181 IVAGGIDNPYPAGHSALFHRIRQECLLVSEYPPGVAPGRLRFLTRNRLVAALSGATVVVE 240 Query 240 AGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHI 299 AGLRSGAANTA WA+ LGR V AVPGPVTS+ASAGCH LLR GA LV RA++IVE VG I Sbjct 241 AGLRSGAANTAGWAKLLGRSVCAVPGPVTSAASAGCHALLRGGANLVGRAEEIVELVGRI 300 Query 300 GELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVA 359 GELA +EP P A LD LS E+QVY+ALP RGA T+DEIA+ + L P Q+LGPL LE+A Sbjct 301 GELASEEPHPVAPLDKLSPIEKQVYDALPSRGAHTVDEIAMLAALPPHQILGPLTTLELA 360 Query 360 GLAECRDGRWRILR 373 G+ DG WR+ R Sbjct 361 GMVVSEDGCWRLRR 374 >gi|404446912|ref|ZP_11012006.1| DNA protecting protein DprA [Mycobacterium vaccae ATCC 25954] gi|403649712|gb|EJZ05044.1| DNA protecting protein DprA [Mycobacterium vaccae ATCC 25954] Length=379 Score = 476 bits (1224), Expect = 4e-132, Method: Compositional matrix adjust. Identities = 255/372 (69%), Positives = 294/372 (80%), Gaps = 1/372 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 M + T RAWAYLSRVAEPP LA LV VG + AA+R+RR VG++L + T AR ID Sbjct 1 MDETTRRAWAYLSRVAEPPNQALAELVSEVGAIVAAERIRRRDVGDDLLRATEARYAIDC 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AA DL L R GGRL+T D+EWP LAF +F+G RP G +PLVLW LGPA L ++ Sbjct 61 AATDLATLDRMGGRLLTDGDEEWPTLAFGSFAGVDRAERPQGLAPLVLWVLGPAHLADLT 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 R+ A+VGTRAATAYGE+VAAD AAGL ERDVAVVSGGAYGIDGAAHRAAL S+G TVAV Sbjct 121 ERSVAIVGTRAATAYGEYVAADFAAGLVERDVAVVSGGAYGIDGAAHRAALGSDGQTVAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LA G D+PYPAGHSALLHRIA++G++ +EYPPGVRPARHRFLTRNRLVAA+ A VVVEA Sbjct 181 LASGVDVPYPAGHSALLHRIARNGLVLSEYPPGVRPARHRFLTRNRLVAALTGATVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLL-RHGAELVTRADDIVEFVGHI 299 GLRSGAANTAAWAR+LGR V AVPGPVTS+ASAGCH LL R LVTRA +IVE +GHI Sbjct 241 GLRSGAANTAAWARSLGRQVCAVPGPVTSAASAGCHELLRREDTVLVTRAPEIVEVMGHI 300 Query 300 GELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVA 359 GELA D P LD LS +RQVYEALP RGA T+DEIAVG+G+ P QVLGPLA++E+ Sbjct 301 GELAEDPAHPVTPLDHLSAVQRQVYEALPRRGARTVDEIAVGAGVAPEQVLGPLALMEID 360 Query 360 GLAECRDGRWRI 371 GL EC +G+WR+ Sbjct 361 GLVECEEGQWRL 372 >gi|357022060|ref|ZP_09084291.1| DNA protecting protein DprA [Mycobacterium thermoresistibile ATCC 19527] gi|356479808|gb|EHI12945.1| DNA protecting protein DprA [Mycobacterium thermoresistibile ATCC 19527] Length=375 Score = 465 bits (1196), Expect = 8e-129, Method: Compositional matrix adjust. Identities = 246/374 (66%), Positives = 292/374 (79%), Gaps = 1/374 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 M D TARAWAYL+RVAEPPC +A LV VGPV+AA+ +RRG V + LA+ T ARR+ D Sbjct 1 MTDQTARAWAYLARVAEPPCPAVAGLVDRVGPVDAAELIRRGDVDDRLAKRTEARRDWDC 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AA DLEL+ R GGRL+T D +WPVLAF AF GA RP GH PL LW +G LD VA Sbjct 61 AATDLELMARLGGRLVTAADPDWPVLAFTAFGGADRSHRPDGHPPLALWVIGELTLDAVA 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 R+AA+VGTRAA++YGEHVAADLA GLA RDVAV+SGGAYGIDG AHRAAL +EG+TVAV Sbjct 121 GRSAAIVGTRAASSYGEHVAADLATGLAARDVAVISGGAYGIDGVAHRAALAAEGLTVAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LAGG D+ YPAGH+ LL RIA+HG+L +EYPPG RP+R RFLTRNRLVAA++ A VVVEA Sbjct 181 LAGGVDVRYPAGHAGLLQRIAEHGLLISEYPPGTRPSRRRFLTRNRLVAALSGATVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRH-GAELVTRADDIVEFVGHI 299 G+RSGAANTAAWA LGR V AVPGPVTS+ S GCH LLR A ++TRA+++VE VG Sbjct 241 GIRSGAANTAAWAETLGRPVGAVPGPVTSATSVGCHVLLRERAATVITRAEEVVELVGRC 300 Query 300 GELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVA 359 GELA D PRP + LD L++AE VYEALP R A T+D+IAV G+ P +VL PL++LE+A Sbjct 301 GELAPDLPRPSSPLDDLTDAELLVYEALPARAARTVDQIAVACGMPPQEVLAPLSMLELA 360 Query 360 GLAECRDGRWRILR 373 GL RDGRW++ R Sbjct 361 GLVVRRDGRWQLAR 374 >gi|353179736|gb|EHB45293.1| DNA protecting protein DprA [Mycobacterium rhodesiae JS60] Length=377 Score = 464 bits (1195), Expect = 1e-128, Method: Compositional matrix adjust. Identities = 262/371 (71%), Positives = 300/371 (81%), Gaps = 0/371 (0%) Query 3 DPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAA 62 D AWAYLSRVAEPPC ++A LV VGP+EA+ R+ G++ + L + T ARR+I A Sbjct 4 DLKTLAWAYLSRVAEPPCGEIAELVGEVGPIEASYRIAAGEISDALRERTVARRDIHAAE 63 Query 63 DDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPR 122 DL+LL RRGGRLITPD DEWP LAFAAF GA R R G PL LWA+GPARLD+V R Sbjct 64 ADLDLLERRGGRLITPDHDEWPTLAFAAFGGAAVRDRQQGRPPLALWAVGPARLDQVTER 123 Query 123 AAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLA 182 +AA+VGTRA ++YGEHVAADLAAGLAE+DV VVSGGAYGIDGAAHRAAL EG TVAVLA Sbjct 124 SAAIVGTRACSSYGEHVAADLAAGLAEQDVTVVSGGAYGIDGAAHRAALSVEGETVAVLA 183 Query 183 GGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGL 242 GG DI YPAGHS+LLHRI+ G+L TEYPPGVRPARHRFLTRNRLVAA+ A VVVEAG+ Sbjct 184 GGIDILYPAGHSSLLHRISNSGLLLTEYPPGVRPARHRFLTRNRLVAALGAATVVVEAGV 243 Query 243 RSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGEL 302 RSGAANTAAWARALGRVV AVPGPVTS++S GCH LLR+GAELVTRA+++VE VG GE Sbjct 244 RSGAANTAAWARALGRVVCAVPGPVTSASSTGCHILLRNGAELVTRAEEVVELVGRAGEF 303 Query 303 AGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLA 362 A + PRP LD LS+AE+QVYEALPGRG + DEIAV SGL P VLGPLA+LE+AGLA Sbjct 304 ADEVPRPTGPLDGLSDAEKQVYEALPGRGTRSADEIAVASGLPPTAVLGPLAMLEIAGLA 363 Query 363 ECRDGRWRILR 373 DG W+++R Sbjct 364 RREDGCWKLVR 374 >gi|383818750|ref|ZP_09974035.1| DNA protecting protein DprA [Mycobacterium phlei RIVM601174] gi|383338214|gb|EID16580.1| DNA protecting protein DprA [Mycobacterium phlei RIVM601174] Length=374 Score = 457 bits (1177), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 254/373 (69%), Positives = 295/373 (80%), Gaps = 0/373 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 M D A AWAYLSRV EPPC L ALV VG VEAA+RVRRG+ G+E+ + ARR+ID Sbjct 1 MTDDEATAWAYLSRVVEPPCPALTALVSRVGAVEAAERVRRGEAGDEVNRQAEARRDIDC 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AA DL++L R GGRLIT +DDEWP+LAFA F GA R P H PLVLWALGPA LDE+A Sbjct 61 AAADLDVLDRMGGRLITIEDDEWPLLAFAGFGGAPERLGPQAHPPLVLWALGPAALDEIA 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 RAAA+VGTRAAT+YGE VAADLA GLA +VAVVSGGAYGIDGAAHRA L +E +TVAV Sbjct 121 YRAAALVGTRAATSYGEFVAADLATGLAAHEVAVVSGGAYGIDGAAHRAVLAAEEVTVAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LA G D+PYPAGH+ LL RI + G++ +EYPPG+RPARHRFLTRNRLVAA+A VVVEA Sbjct 181 LACGLDVPYPAGHAGLLRRITERGLVLSEYPPGIRPARHRFLTRNRLVAALAGVTVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 G RSGAANTAAWARALGR V AVPGP+TS+AS GCH LLR GA +VTRA+++VE+ G IG Sbjct 241 GARSGAANTAAWARALGRPVCAVPGPITSAASVGCHALLRGGAHIVTRAEEVVEYAGRIG 300 Query 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 ELA ++ RP + LD LS+ E++VYEALPGRG T +E+AV SGL QVLGPLA LE G Sbjct 301 ELASEQERPSSPLDELSDTEKRVYEALPGRGGRTAEEVAVASGLPVRQVLGPLAGLEAQG 360 Query 361 LAECRDGRWRILR 373 L RDGRW++ R Sbjct 361 LVVNRDGRWKLAR 373 >gi|126434555|ref|YP_001070246.1| DNA protecting protein DprA [Mycobacterium sp. JLS] gi|126234355|gb|ABN97755.1| DNA protecting protein DprA [Mycobacterium sp. JLS] Length=376 Score = 448 bits (1153), Expect = 7e-124, Method: Compositional matrix adjust. Identities = 250/368 (68%), Positives = 291/368 (80%), Gaps = 1/368 (0%) Query 7 RAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLE 66 RAWAYLSRVAEPPC +LAALV VGPVEAA+++RR +VG L + T ARRE D A DL+ Sbjct 7 RAWAYLSRVAEPPCPELAALVTDVGPVEAAEKIRRAEVGERLRRKTEARREHDCAQADLD 66 Query 67 LLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAV 126 +L R GGRL+T DDEWP+L F F+G + RP GH PLVLWA+GP +DEVA RAAA+ Sbjct 67 VLARMGGRLVTAFDDEWPLLNFLKFTGVDTQKRPQGHPPLVLWAVGPVGMDEVAERAAAI 126 Query 127 VGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFD 186 VGTRAATAYGEHVAADLAAGLA RDVAVVSGGA+GIDGAAHRA L EG+TVAV+AGG D Sbjct 127 VGTRAATAYGEHVAADLAAGLAMRDVAVVSGGAFGIDGAAHRATLAGEGVTVAVVAGGID 186 Query 187 IPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGA 246 +PYPAGHSALL RI +G++ +EYPPG RP R RFLTRNRLVAA++ A VVVEAG RSGA Sbjct 187 VPYPAGHSALLARIRANGLVLSEYPPGSRPTRSRFLTRNRLVAALSGATVVVEAGARSGA 246 Query 247 ANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRH-GAELVTRADDIVEFVGHIGELAGD 305 ANTAAWA ALGR V AVPGPVTS AS GCH LLR GA LVTRA++I+E VG +GEL Sbjct 247 ANTAAWAGALGRNVCAVPGPVTSGASVGCHRLLRDGGAILVTRAEEIIELVGRMGELPPV 306 Query 306 EPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECR 365 E P LD L++AER++Y+ALP RGA + DE+AV +G+ QV+GPLA+LEVAGL Sbjct 307 EAGPATPLDGLTDAERRIYDALPKRGARSADEVAVAAGIPAYQVVGPLAMLEVAGLVVHE 366 Query 366 DGRWRILR 373 GRWR+ R Sbjct 367 GGRWRMAR 374 >gi|108798955|ref|YP_639152.1| DNA processing protein DprA [Mycobacterium sp. MCS] gi|119868070|ref|YP_938022.1| DNA protecting protein DprA [Mycobacterium sp. KMS] gi|108769374|gb|ABG08096.1| DNA protecting protein DprA [Mycobacterium sp. MCS] gi|119694159|gb|ABL91232.1| DNA protecting protein DprA [Mycobacterium sp. KMS] Length=376 Score = 446 bits (1146), Expect = 6e-123, Method: Compositional matrix adjust. Identities = 249/368 (68%), Positives = 290/368 (79%), Gaps = 1/368 (0%) Query 7 RAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLE 66 RAWAYLSRVAEPPC +LAALV VGPVEAA+++RR +VG L + T ARRE A DL+ Sbjct 7 RAWAYLSRVAEPPCPELAALVTDVGPVEAAEKIRRAEVGERLRRKTEARREHGCAQADLD 66 Query 67 LLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAV 126 +L R GGRL+T DDEWP+L F F+G + RP GH PLVLWA+GP +DEVA RAAA+ Sbjct 67 VLARMGGRLVTAFDDEWPLLNFLKFTGVDTQKRPQGHPPLVLWAVGPVGMDEVAERAAAI 126 Query 127 VGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFD 186 VGTRAATAYGEHVAADLAAGLA RDVAVVSGGA+GIDGAAHRA L EG+TVAV+AGG D Sbjct 127 VGTRAATAYGEHVAADLAAGLAMRDVAVVSGGAFGIDGAAHRATLAGEGVTVAVVAGGID 186 Query 187 IPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGA 246 +PYPAGHSALL RI +G++ +EYPPG RP R RFLTRNRLVAA++ A VVVEAG RSGA Sbjct 187 VPYPAGHSALLARIRANGLVLSEYPPGSRPTRSRFLTRNRLVAALSGATVVVEAGARSGA 246 Query 247 ANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRH-GAELVTRADDIVEFVGHIGELAGD 305 ANTAAWA ALGR V AVPGPVTS AS GCH LLR GA LVTRA++I+E VG +GEL Sbjct 247 ANTAAWAGALGRNVCAVPGPVTSGASVGCHRLLRDGGAILVTRAEEIIELVGRMGELPPV 306 Query 306 EPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECR 365 E P LD L++AER++Y+ALP RGA + DE+AV +G+ QV+GPLA+LEVAGL Sbjct 307 EAGPATPLDGLTDAERRIYDALPKRGARSADEVAVAAGIPAYQVVGPLAMLEVAGLVVHE 366 Query 366 DGRWRILR 373 GRWR+ R Sbjct 367 GGRWRMAR 374 >gi|374608425|ref|ZP_09681224.1| DNA protecting protein DprA [Mycobacterium tusciae JS617] gi|373553957|gb|EHP80544.1| DNA protecting protein DprA [Mycobacterium tusciae JS617] Length=373 Score = 442 bits (1136), Expect = 7e-122, Method: Compositional matrix adjust. Identities = 249/373 (67%), Positives = 296/373 (80%), Gaps = 2/373 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 M D ARAWAYLSRVAEPPC +L AL R VGPVEAA+RVR G + + + ARR+ID Sbjct 1 MTDEIARAWAYLSRVAEPPCPELRALARRVGPVEAAERVRSGAADDTVGRVVEARRQIDC 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AA+DLE+L R GGRLIT DD EWP+LAF +F G R P H P+VLW +GP LDEV+ Sbjct 61 AAEDLEVLDRMGGRLITADDVEWPLLAFNSFRGIDDR--PQAHEPMVLWVVGPVSLDEVS 118 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 RAAA+VGTRAATAYGE VAADLA GL RD AVVSGGA+GIDGAAHRAAL ++G+TVAV Sbjct 119 NRAAAIVGTRAATAYGEFVAADLAEGLVTRDAAVVSGGAFGIDGAAHRAALAADGLTVAV 178 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LAGG D+PYPA H+A+L R+ G+L +EYPPG RPARHRFLTRNRLVAA+A A VVVEA Sbjct 179 LAGGVDVPYPAAHAAMLRRVRDQGLLISEYPPGERPARHRFLTRNRLVAALAGATVVVEA 238 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 G RSGAANTAAWARALGR V AVPGPVTSS S GCH LLR GA +VTRA++++E +GH+G Sbjct 239 GARSGAANTAAWARALGRSVCAVPGPVTSSVSVGCHALLRAGANVVTRAEEVIELIGHMG 298 Query 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 E A DE RP + LD L + +++VY+ALPGRG+ T DE+AV +GL P QVLGPLA+LE++G Sbjct 299 EFAPDEHRPVSVLDGLGDIDKRVYDALPGRGSRTADEVAVAAGLPPMQVLGPLAVLELSG 358 Query 361 LAECRDGRWRILR 373 L R+GRW++ R Sbjct 359 LVVRREGRWKLAR 371 >gi|145224718|ref|YP_001135396.1| DNA protecting protein DprA [Mycobacterium gilvum PYR-GCK] gi|315445048|ref|YP_004077927.1| DNA protecting protein DprA [Mycobacterium gilvum Spyr1] gi|145217204|gb|ABP46608.1| DNA protecting protein DprA [Mycobacterium gilvum PYR-GCK] gi|315263351|gb|ADU00093.1| DNA protecting protein DprA [Mycobacterium gilvum Spyr1] Length=388 Score = 436 bits (1121), Expect = 4e-120, Method: Compositional matrix adjust. Identities = 236/374 (64%), Positives = 279/374 (75%), Gaps = 1/374 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 M + T RAWAY+SRVAEPP L+ LV G V AA+R+RR + +L + T AR ++D Sbjct 4 MDEATRRAWAYVSRVAEPPHRLLSELVATEGVVAAAERIRRRDIDPKLLRATEARYDLDC 63 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 A DDLE+L R GGRL+T D+EWP LAFAAF G RP G PLVLW LGP L +VA Sbjct 64 ARDDLEVLDRMGGRLLTDTDEEWPHLAFAAFRGVDHARRPQGRPPLVLWVLGPLLLCDVA 123 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 R+AA+VGTRAAT+YGE+VAADLAAGL ERD AVVSGGAYGIDGAAHRA L ++G TVAV Sbjct 124 ERSAAIVGTRAATSYGEYVAADLAAGLVERDFAVVSGGAYGIDGAAHRATLAADGDTVAV 183 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LA G D+PYPAGHSALLHR+ +HG+L +EYPPG RP R +FLTRNRLVAA+ RA VV+EA Sbjct 184 LAAGLDVPYPAGHSALLHRVGKHGLLVSEYPPGTRPTRRQFLTRNRLVAALGRATVVIEA 243 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLL-RHGAELVTRADDIVEFVGHI 299 G+RSGAANTA WA ALGR V AVPGP+TS++S GCH LL R G LVTRA DIVE VG Sbjct 244 GVRSGAANTAGWADALGRQVCAVPGPITSASSVGCHELLKRDGVTLVTRAADIVELVGRS 303 Query 300 GELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVA 359 GE A D RP LD L + E V++ALPGRG +T+DEIAV +GL VLGPL +L V Sbjct 304 GEFAPDLDRPTTGLDDLDDVELAVFDALPGRGMSTVDEIAVTAGLPATDVLGPLTMLNVR 363 Query 360 GLAECRDGRWRILR 373 GLA +G W++ + Sbjct 364 GLAVQENGGWKLAK 377 >gi|407985960|ref|ZP_11166529.1| DNA protecting protein DprA [Mycobacterium hassiacum DSM 44199] gi|407372425|gb|EKF21472.1| DNA protecting protein DprA [Mycobacterium hassiacum DSM 44199] Length=394 Score = 431 bits (1109), Expect = 1e-118, Method: Compositional matrix adjust. Identities = 252/374 (68%), Positives = 288/374 (78%), Gaps = 3/374 (0%) Query 3 DPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAA 62 D ARAWAYLSRVAEPPC L LV GPVEAA RVR G VG L +H ARR ID AA Sbjct 20 DEIARAWAYLSRVAEPPCPALTDLVLRCGPVEAAARVRAGAVGAALLEHVQARRHIDCAA 79 Query 63 DDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCG---HSPLVLWALGPARLDEV 119 +DL++L R GGRL+T D EWPVLAF AF GA R G H PLVLW GP RLDE+ Sbjct 80 EDLDVLQRLGGRLVTMGDAEWPVLAFRAFDGAPQRLERMGSRAHPPLVLWVTGPVRLDEI 139 Query 120 APRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVA 179 RAAA+VGTRAATAYGEHVAADLAAGL RD AVVSGGA+G+DGAAHRAAL + G TVA Sbjct 140 TARAAAIVGTRAATAYGEHVAADLAAGLVARDAAVVSGGAFGVDGAAHRAALAAGGPTVA 199 Query 180 VLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVE 239 VLAGG D+PYPAGH++LL RI + G++ +EYPPG RPARHRFLTRNRLVAA+A A VVVE Sbjct 200 VLAGGIDVPYPAGHTSLLRRIGEEGLVVSEYPPGERPARHRFLTRNRLVAALAGATVVVE 259 Query 240 AGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHI 299 AG RSGAANTAAW+RALGR V AVPGPVTS+AS GCH LLR GA+LVTRA+DIVE +G + Sbjct 260 AGARSGAANTAAWSRALGRPVCAVPGPVTSAASVGCHALLRAGAQLVTRAEDIVELIGRM 319 Query 300 GELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVA 359 GE A +E RP LD L+E E++VY+ALP R A T DEIAV +GL +LGPLA+LE++ Sbjct 320 GEFAPEEQRPTTVLDGLAEIEQRVYDALPARAARTADEIAVAAGLPATAILGPLAVLELS 379 Query 360 GLAECRDGRWRILR 373 GL GRW+ +R Sbjct 380 GLVTAHAGRWQRVR 393 >gi|392415817|ref|YP_006452422.1| DNA protecting protein DprA [Mycobacterium chubuense NBB4] gi|390615593|gb|AFM16743.1| DNA protecting protein DprA [Mycobacterium chubuense NBB4] Length=375 Score = 431 bits (1107), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 244/374 (66%), Positives = 287/374 (77%), Gaps = 1/374 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNE-LAQHTGARREID 59 M + T RAWAYLSRVAEPP +LA LV VG +EAADR+RR + ++ L + T AR E++ Sbjct 1 MDEKTRRAWAYLSRVAEPPNPRLAVLVESVGALEAADRIRRRALDDDKLLRATEARHEMN 60 Query 60 RAADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEV 119 AA DLE+L R GGRL+T +DDEWP LAF F RP H+PLVLW LGP R+ ++ Sbjct 61 GAAADLEVLDRAGGRLVTAEDDEWPGLAFVGFGHIDHAKRPQAHAPLVLWVLGPLRMCDI 120 Query 120 APRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVA 179 A RAAA+VGTRAATAYGE AADLAAGL ERDVAVVSGGAYGIDGAAHRAAL SEG TVA Sbjct 121 AERAAAIVGTRAATAYGEFAAADLAAGLVERDVAVVSGGAYGIDGAAHRAALASEGDTVA 180 Query 180 VLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVE 239 VLA G D+PYPAGHSALLHR+ +HG++ TEY PG+RP R +FL RNRLVAA+A A VVVE Sbjct 181 VLACGVDVPYPAGHSALLHRVGRHGLVVTEYAPGIRPTRRQFLARNRLVAALAGATVVVE 240 Query 240 AGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHI 299 AG RSGAANTAAWARALGR V AVPGP+TS++S GCHTL+R A LVTRA+++VE VG I Sbjct 241 AGARSGAANTAAWARALGRAVCAVPGPITSASSVGCHTLIRGDATLVTRAEEVVELVGRI 300 Query 300 GELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVA 359 GE A D RP +D LS+ E V+EALP RG T+DEIAV +G+ PA VLGPL +L+V Sbjct 301 GEFAPDVERPTTEVDGLSDEELTVFEALPRRGKRTLDEIAVAAGMAPADVLGPLTMLDVR 360 Query 360 GLAECRDGRWRILR 373 GL DG W++ R Sbjct 361 GLVAREDGCWKLAR 374 >gi|120403195|ref|YP_953024.1| transcriptional regulator TrmB [Mycobacterium vanbaalenii PYR-1] gi|119956013|gb|ABM13018.1| DNA protecting protein DprA [Mycobacterium vanbaalenii PYR-1] Length=379 Score = 427 bits (1099), Expect = 2e-117, Method: Compositional matrix adjust. Identities = 250/376 (67%), Positives = 288/376 (77%), Gaps = 6/376 (1%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 M + T RAWAYLSRVAEPPCA LAALV G V+AA+RVRRG V +L +RR+ID Sbjct 1 MDETTRRAWAYLSRVAEPPCAALAALVAEAGAVDAAERVRRGAVSADLRARVESRRDIDC 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCG--HSPLVLWALGPARLDE 118 AA DL+L+ RRGGRLITPDDD+WP F G + P + PLVLW LG L + Sbjct 61 AAADLDLIDRRGGRLITPDDDDWPTWVLNDF---GRKDPPVAEDYPPLVLWVLGQENLAD 117 Query 119 VAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITV 178 VA RAAA+VGTRA TAYGEHV ADL AGL ERDVAVVSGGA+GIDGAAHRAAL S+G+TV Sbjct 118 VAARAAAIVGTRACTAYGEHVTADLVAGLVERDVAVVSGGAFGIDGAAHRAALASDGVTV 177 Query 179 AVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVV 238 AVLAGG D+PYPAGHSALLHR++ G+L +EYPPGVRPAR+RFLTRNRLVAA++ A VVV Sbjct 178 AVLAGGIDVPYPAGHSALLHRVSGSGLLVSEYPPGVRPARYRFLTRNRLVAALSGATVVV 237 Query 239 EAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLL-RHGAELVTRADDIVEFVG 297 EAGLRSGAANTA W+R+LGR V AVPGPVTS+ASAGCH LL R G LVTRA ++VE +G Sbjct 238 EAGLRSGAANTAGWSRSLGRGVCAVPGPVTSAASAGCHELLRREGTVLVTRAQEVVEVMG 297 Query 298 HIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILE 357 IGELA + P LD LS +R VYEALP RGA T+DEI SG+ AQVLGPL ILE Sbjct 298 RIGELADELEHPVRPLDGLSGVQRLVYEALPARGARTVDEIGRDSGVPAAQVLGPLTILE 357 Query 358 VAGLAECRDGRWRILR 373 + GL E +G+WR+ R Sbjct 358 IDGLVERHEGKWRLAR 373 >gi|375142813|ref|YP_005003462.1| DNA protecting protein DprA [Mycobacterium rhodesiae NBB3] gi|359823434|gb|AEV76247.1| DNA protecting protein DprA [Mycobacterium rhodesiae NBB3] Length=373 Score = 421 bits (1083), Expect = 1e-115, Method: Compositional matrix adjust. Identities = 251/373 (68%), Positives = 296/373 (80%), Gaps = 2/373 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 M D +RAWAYLSRVAEPPC +L AL R VGPVEAA+RVR G V + +A+ T ARR+ID Sbjct 1 MTDQISRAWAYLSRVAEPPCPELRALTRRVGPVEAAERVRTGDVDDVIARRTEARRQIDC 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 AA+DLE L R GGRLI DD EWP+LAF +F G R P H P+VLW +GPA L +A Sbjct 61 AANDLETLDRMGGRLINADDAEWPLLAFNSFCGVSGR--PQAHEPMVLWVVGPAYLAGIA 118 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 RAAA+VGTRAATAYGE VAADLAAGLA RD AVVSGGA+GIDGAAHRAAL ++G+TVAV Sbjct 119 ERAAAIVGTRAATAYGEFVAADLAAGLAARDAAVVSGGAFGIDGAAHRAALAADGVTVAV 178 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LAGG D+PYPA H+A+L R+ G++ +EYPPG RPARHRFLTRNRLVAA+A A VVVEA Sbjct 179 LAGGIDVPYPAAHAAMLRRVRGEGLVISEYPPGERPARHRFLTRNRLVAALAGATVVVEA 238 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 G RSGAANTAAWA ALGR V AVPGPVTSSAS GCH LLR GA ++TR +D+VE +G G Sbjct 239 GARSGAANTAAWAGALGRPVCAVPGPVTSSASVGCHALLRAGANVITRTEDLVELIGRAG 298 Query 301 ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG 360 ELA +EPRP + LD L++AER VY+ALP RG+ T DE+AV +GL P QVLGPLA+LE++G Sbjct 299 ELAPEEPRPASPLDELADAERHVYDALPARGSRTADEVAVAAGLPPMQVLGPLAVLELSG 358 Query 361 LAECRDGRWRILR 373 L +GRW++ R Sbjct 359 LVVRSEGRWKLAR 371 >gi|289763072|ref|ZP_06522450.1| smf family protein [Mycobacterium tuberculosis GM 1503] gi|289710578|gb|EFD74594.1| smf family protein [Mycobacterium tuberculosis GM 1503] Length=308 Score = 420 bits (1080), Expect = 2e-115, Method: Compositional matrix adjust. Identities = 222/222 (100%), Positives = 222/222 (100%), Gaps = 0/222 (0%) Query 168 RAALDSEGITVAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRL 227 RAALDSEGITVAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRL Sbjct 87 RAALDSEGITVAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRL 146 Query 228 VAAVARAAVVVEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVT 287 VAAVARAAVVVEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVT Sbjct 147 VAAVARAAVVVEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVT 206 Query 288 RADDIVEFVGHIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPA 347 RADDIVEFVGHIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPA Sbjct 207 RADDIVEFVGHIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPA 266 Query 348 QVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV 389 QVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV Sbjct 267 QVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV 308 >gi|363996404|gb|EHM17619.1| hypothetical protein MBOL_30440 [Mycobacterium abscessus subsp. bolletii BD] Length=378 Score = 400 bits (1029), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 215/368 (59%), Positives = 263/368 (72%), Gaps = 1/368 (0%) Query 9 WAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELL 68 WAYLSRV+E P A+LAA+V G E ADRVRR V +++ AR ++DR+ +DLE+L Sbjct 8 WAYLSRVSEAPSAELAAMVSVFGVRETADRVRRLDVPDQVRAVVRARHDVDRSREDLEIL 67 Query 69 MRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVG 128 R GRL+TPDD EWP F AF+ + P G PL LW +G L EV RAAA+VG Sbjct 68 SRLQGRLVTPDDAEWPHWQFQAFASVDTKRMPNGRVPLALWVVGERSLAEVTSRAAALVG 127 Query 129 TRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIP 188 TRA + YGEHV A+LAAGLA R+VAVVSG A+GIDG AHRA L +G+TVAVLAGG D+P Sbjct 128 TRACSGYGEHVTAELAAGLAAREVAVVSGAAFGIDGVAHRATLACDGVTVAVLAGGVDVP 187 Query 189 YPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGAAN 248 YPAGHS LL+RIA+HG++ +EYPPGVRPARHRFLTRNRLVAA++ A VVVEAG RSGAAN Sbjct 188 YPAGHSGLLYRIARHGLVVSEYPPGVRPARHRFLTRNRLVAALSGATVVVEAGARSGAAN 247 Query 249 TAAWARALGRVVAAVPGPVTSSASAGCHT-LLRHGAELVTRADDIVEFVGHIGELAGDEP 307 TAAWAR LGR V AVPGP+TS+AS G H + GA+LV A D+V G +GE A Sbjct 248 TAAWARTLGRPVGAVPGPITSAASVGTHVEIAERGAQLVVCAQDVVALAGRLGEFAAAPD 307 Query 308 RPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDG 367 RPG+ +D L + E++VYEALPGRG+ T+ E+ SGL +V G LAILE+ L G Sbjct 308 RPGSVVDGLGDDEKRVYEALPGRGSTTVRELVRESGLSAGRVQGALAILELEQLVIDVAG 367 Query 368 RWRILRAG 375 W++ R Sbjct 368 EWKLRRTN 375 >gi|397679967|ref|YP_006521502.1| hypothetical protein MYCMA_1760 [Mycobacterium massiliense str. GO 06] gi|353452139|gb|EHC00533.1| hypothetical protein MAB47J26_03440 [Mycobacterium abscessus 47J26] gi|392137083|gb|EIU62820.1| DNA protecting protein DprA [Mycobacterium massiliense 1S-151-0930] 10 more sequence titles Length=378 Score = 395 bits (1016), Expect = 7e-108, Method: Compositional matrix adjust. Identities = 213/368 (58%), Positives = 261/368 (71%), Gaps = 1/368 (0%) Query 9 WAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELL 68 WAYLSRV+E P A+LAA+V G E A RVRR V +++ AR ++DR+ +DLE+L Sbjct 8 WAYLSRVSEAPSAELAAMVSVFGVRETAARVRRLDVPDQVRAVVRARHDVDRSREDLEIL 67 Query 69 MRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVG 128 R GRL+TPDD EWP F AF+ + P G PL LW +G L EV RAAA+VG Sbjct 68 SRLQGRLVTPDDPEWPHWQFQAFASVDTKRMPNGRMPLALWVVGERSLAEVTSRAAALVG 127 Query 129 TRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIP 188 TRA + YGEHV A+LAAGL R+VAVVSG A+GIDG AHRA L +G+TVAVLAGG D+P Sbjct 128 TRACSGYGEHVTAELAAGLTAREVAVVSGAAFGIDGVAHRATLACDGVTVAVLAGGVDVP 187 Query 189 YPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGAAN 248 YPAGHS LL+RIA+HG++ +EYPPGVRPARHRFLTRNRLVAA++ A VVVEAG RSGAAN Sbjct 188 YPAGHSGLLYRIARHGLVVSEYPPGVRPARHRFLTRNRLVAALSGATVVVEAGARSGAAN 247 Query 249 TAAWARALGRVVAAVPGPVTSSASAGCHT-LLRHGAELVTRADDIVEFVGHIGELAGDEP 307 TAAWAR LGR V AVPGP+TS+AS G H + GA+LV A D+V G +GE A Sbjct 248 TAAWARILGRPVGAVPGPITSAASVGTHVEIAERGAQLVVCAQDVVALAGRLGEFAAVPD 307 Query 308 RPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDG 367 RPG+ +D L + E++VYEALPGRG+ T+ E+ SGL +V G LAILE+ L G Sbjct 308 RPGSVIDGLGDDEKRVYEALPGRGSTTVRELVRESGLTVGRVQGALAILELEQLVIDVAG 367 Query 368 RWRILRAG 375 W++ R Sbjct 368 DWKLRRTN 375 >gi|382945524|gb|EIC69818.1| hypothetical protein S7W_08113 [Mycobacterium abscessus M94] Length=378 Score = 395 bits (1015), Expect = 9e-108, Method: Compositional matrix adjust. Identities = 213/368 (58%), Positives = 261/368 (71%), Gaps = 1/368 (0%) Query 9 WAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELL 68 WAYLSRV+E P A+LAA+V G E A RVRR V +++ AR ++DR+ +DLE+L Sbjct 8 WAYLSRVSEAPSAELAAMVSVFGVRETAARVRRLDVPDQVRAVVRARHDVDRSREDLEIL 67 Query 69 MRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVG 128 R GRL+TPDD EWP F AF+ + P G PL LW +G L EV RAAA+VG Sbjct 68 SRLQGRLVTPDDAEWPHWQFQAFASVDTKRMPNGRMPLALWVVGERSLAEVTSRAAALVG 127 Query 129 TRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIP 188 TRA + YGEHV A+LAAGL R+VAVVSG A+GIDG AHRA L +G+TVAVLAGG D+P Sbjct 128 TRACSGYGEHVTAELAAGLTAREVAVVSGAAFGIDGVAHRATLACDGVTVAVLAGGVDVP 187 Query 189 YPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGAAN 248 YPAGHS LL+RIA+HG++ +EYPPGVRPARHRFLTRNRLVAA++ A VVVEAG RSGAAN Sbjct 188 YPAGHSGLLYRIARHGLVVSEYPPGVRPARHRFLTRNRLVAALSGATVVVEAGARSGAAN 247 Query 249 TAAWARALGRVVAAVPGPVTSSASAGCHT-LLRHGAELVTRADDIVEFVGHIGELAGDEP 307 TAAWAR LGR V AVPGP+TS+AS G H + GA+LV A D+V G +GE A Sbjct 248 TAAWARILGRPVGAVPGPITSAASVGTHVEIAERGAQLVVCAQDVVALAGRLGEFAAVPD 307 Query 308 RPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDG 367 RPG+ +D L + E++VYEALPGRG+ T+ E+ SGL +V G LAILE+ L G Sbjct 308 RPGSVIDGLGDDEKRVYEALPGRGSTTVRELVRESGLTVGRVQGALAILELEQLVIDVAG 367 Query 368 RWRILRAG 375 W++ R Sbjct 368 DWKLRRTN 375 >gi|169630293|ref|YP_001703942.1| hypothetical protein MAB_3212c [Mycobacterium abscessus ATCC 19977] gi|169242260|emb|CAM63288.1| Conserved hypothetical protein [Mycobacterium abscessus] gi|382943431|gb|EIC67745.1| hypothetical protein OUW_08433 [Mycobacterium abscessus M93] 27 more sequence titles Length=378 Score = 393 bits (1010), Expect = 3e-107, Method: Compositional matrix adjust. Identities = 212/368 (58%), Positives = 260/368 (71%), Gaps = 1/368 (0%) Query 9 WAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELL 68 WAYLSRV+E P A+LAA+V G E A RVRR V +++ AR ++DR+ +DLE+L Sbjct 8 WAYLSRVSEAPSAELAAMVSVFGVRETAARVRRLDVPDQVRAVVRARHDVDRSREDLEIL 67 Query 69 MRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVG 128 R GRL+TPDD EWP F AF+ + P G PL LW +G L EV RAAA+VG Sbjct 68 SRLQGRLVTPDDAEWPHWQFQAFASVDTKRMPNGRMPLALWVVGERSLAEVTSRAAALVG 127 Query 129 TRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIP 188 TRA + YGEHV A+LAAGL R+VAVVSG A+GIDG AHRA L +G+TVAVLAGG D+P Sbjct 128 TRACSGYGEHVTAELAAGLTAREVAVVSGAAFGIDGVAHRATLACDGVTVAVLAGGVDVP 187 Query 189 YPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGAAN 248 YPAGHS LL+RIA+HG++ +EYPPGVRPARHRFLTRNRLVAA++ A VVVEAG RSGAAN Sbjct 188 YPAGHSGLLYRIARHGLVVSEYPPGVRPARHRFLTRNRLVAALSGATVVVEAGARSGAAN 247 Query 249 TAAWARALGRVVAAVPGPVTSSASAGCHT-LLRHGAELVTRADDIVEFVGHIGELAGDEP 307 TAAWAR LGR V AVPGP+TS+AS G H + GA+LV A D+V G +GE Sbjct 248 TAAWARILGRPVGAVPGPITSAASVGTHVEIAERGAQLVVCAQDVVALAGRLGEFTAAPD 307 Query 308 RPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDG 367 RPG+ +D L + E++VYEALPGRG+ T+ E+ SGL +V G LAILE+ L G Sbjct 308 RPGSVIDGLGDDEKRVYEALPGRGSTTVRELVRESGLSVGRVQGALAILELEQLVIDVAG 367 Query 368 RWRILRAG 375 W++ R Sbjct 368 DWKLRRTN 375 >gi|365871140|ref|ZP_09410681.1| hypothetical protein MMAS_30830 [Mycobacterium massiliense CCUG 48898] gi|363994943|gb|EHM16161.1| hypothetical protein MMAS_30830 [Mycobacterium massiliense CCUG 48898] gi|392238821|gb|EIV64314.1| DNA protecting protein DprA [Mycobacterium massiliense CCUG 48898] Length=378 Score = 392 bits (1007), Expect = 7e-107, Method: Compositional matrix adjust. Identities = 212/368 (58%), Positives = 259/368 (71%), Gaps = 1/368 (0%) Query 9 WAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELL 68 WAYLSRV+E P A+LAA+V G E A RVRR V + + AR ++DR+ +DLE+L Sbjct 8 WAYLSRVSEAPSAELAAMVSVFGVRETAARVRRLDVPDRVRAVVRARHDVDRSREDLEIL 67 Query 69 MRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVG 128 R GRL+TPDD EWP F AF+ + P G PL LW +G L EV RAAA+VG Sbjct 68 SRLQGRLVTPDDAEWPHWQFQAFASVDTKRMPNGRVPLALWVVGERSLAEVTSRAAALVG 127 Query 129 TRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIP 188 TRA + YGEHV A+LAAGL R+V VVSG A+GIDG AHRA L +G+TVAVLAGG D+P Sbjct 128 TRACSGYGEHVTAELAAGLTAREVTVVSGAAFGIDGVAHRATLACDGVTVAVLAGGVDVP 187 Query 189 YPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGAAN 248 YPAGHS LL+RIA+HG++ +EYPPGVRPARHRFLTRNRLVAA++ A VVVEAG RSGAAN Sbjct 188 YPAGHSGLLYRIARHGLVVSEYPPGVRPARHRFLTRNRLVAALSGATVVVEAGARSGAAN 247 Query 249 TAAWARALGRVVAAVPGPVTSSASAGCHT-LLRHGAELVTRADDIVEFVGHIGELAGDEP 307 TAAWAR LGR V AVPGP+TS+AS G H + GA+LV A D+V G +GE A Sbjct 248 TAAWARILGRPVGAVPGPITSAASVGTHVEIAERGAQLVVCAQDVVALAGRLGEFAAAPD 307 Query 308 RPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDG 367 RPG+ +D L + E++VYEALPGRG+ T+ E+ SGL +V G LAILE+ L G Sbjct 308 RPGSVVDGLGDDEKRVYEALPGRGSTTVRELVRESGLSAGRVQGALAILELEQLVIDVAG 367 Query 368 RWRILRAG 375 W++ R Sbjct 368 DWKLRRTN 375 >gi|254776194|ref|ZP_05217710.1| smf family protein [Mycobacterium avium subsp. avium ATCC 25291] Length=275 Score = 381 bits (978), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 221/273 (81%), Positives = 235/273 (87%), Gaps = 7/273 (2%) Query 3 DPTA-RAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRA 61 DP A RAWAYLSRVAEPPC L ALVR VGPVEAA+RVRR V + LA+HT ARREIDRA Sbjct 5 DPRALRAWAYLSRVAEPPCPGLGALVRRVGPVEAAERVRRAAVDDALAKHTEARREIDRA 64 Query 62 ADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSP----LVLWALGPARLD 117 A DLEL+ RRGGRL+TPDDDEWPVLAFAAF A RP G +P LVLWA GPARLD Sbjct 65 AADLELIARRGGRLVTPDDDEWPVLAFAAFGAA--TPRPPGTAPMLAPLVLWAQGPARLD 122 Query 118 EVAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGIT 177 EVA RAAAVVGTRAATAYGE VA DL AGL +RDVAVVSGGAYGIDGAAHRAALD +G+T Sbjct 123 EVAHRAAAVVGTRAATAYGEQVAGDLVAGLVQRDVAVVSGGAYGIDGAAHRAALDCDGVT 182 Query 178 VAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVV 237 VAVLAGG D+ YP+GHSALLHRI QHG+LFTEY PGVRPAR+RFLTRNRLVAA+A A VV Sbjct 183 VAVLAGGLDVAYPSGHSALLHRIGQHGLLFTEYAPGVRPARYRFLTRNRLVAAMAGATVV 242 Query 238 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSS 270 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSS Sbjct 243 VEAGLRSGAANTAAWARALGRVVAAVPGPVTSS 275 >gi|254820364|ref|ZP_05225365.1| smf family protein [Mycobacterium intracellulare ATCC 13950] Length=267 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 216/263 (83%), Positives = 236/263 (90%), Gaps = 0/263 (0%) Query 120 APRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVA 179 A RAAAVVGTR +TAYGE +AA+LAA LA+RDVAVVSGGAYGIDGAAHRA LD +GITVA Sbjct 1 AQRAAAVVGTRTSTAYGEQMAAELAADLAQRDVAVVSGGAYGIDGAAHRAVLDCDGITVA 60 Query 180 VLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVE 239 VLAGG D+PYPAGH+ALLHRI QHG+LFTEY PGVRPARHRFLTRNRLVAAV+ AAVVVE Sbjct 61 VLAGGLDVPYPAGHTALLHRIGQHGLLFTEYAPGVRPARHRFLTRNRLVAAVSGAAVVVE 120 Query 240 AGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHI 299 AGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCH LLR GAELVTRA+ IVE +GHI Sbjct 121 AGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHALLRDGAELVTRAEHIVELIGHI 180 Query 300 GELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVA 359 GELA DEPRP LD LSEAER+VYEALPGRGAAT+DEIAV SGL+P QVLGPLA+LE+A Sbjct 181 GELAPDEPRPVTPLDGLSEAERRVYEALPGRGAATVDEIAVASGLVPEQVLGPLAMLELA 240 Query 360 GLAECRDGRWRILRAGAGQAAAK 382 GL + +DG WRI+RA AG AA+ Sbjct 241 GLVQRQDGLWRIVRATAGHAAST 263 >gi|296171474|ref|ZP_06852760.1| smf family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894160|gb|EFG73920.1| smf family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=250 Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 197/245 (81%), Positives = 217/245 (89%), Gaps = 2/245 (0%) Query 3 DPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAA 62 DP RAWAYLSRVAEPPCA+LA LVR VGPVEAA+RVR G V ++LA+ T ARR ID AA Sbjct 8 DPVLRAWAYLSRVAEPPCAELAILVRRVGPVEAAERVRHGLVDDDLARLTEARRGIDCAA 67 Query 63 DDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPR 122 DLELL RRGGRL+TPDDDEWP+LAFAAF+ A +AR +P+VLWA GPARLDEVA R Sbjct 68 ADLELLARRGGRLVTPDDDEWPLLAFAAFANASVKAR--AGAPMVLWAQGPARLDEVAQR 125 Query 123 AAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLA 182 AAAVVGTRAAT+YGE VA DLAAGLA+R+VAVVSGGAYGIDGAAHRA L+++GITVAVLA Sbjct 126 AAAVVGTRAATSYGEQVAEDLAAGLAQREVAVVSGGAYGIDGAAHRAVLNADGITVAVLA 185 Query 183 GGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGL 242 GG D+PYP+GHSALLHRI QHG+LFTEYPPGVRPARHRFLTRNRLVAAVA AAVVVEAGL Sbjct 186 GGLDVPYPSGHSALLHRIGQHGLLFTEYPPGVRPARHRFLTRNRLVAAVAGAAVVVEAGL 245 Query 243 RSGAA 247 RSGAA Sbjct 246 RSGAA 250 >gi|312139229|ref|YP_004006565.1| smf family protein [Rhodococcus equi 103S] gi|311888568|emb|CBH47880.1| putative SMF family protein [Rhodococcus equi 103S] Length=373 Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 193/368 (53%), Positives = 237/368 (65%), Gaps = 4/368 (1%) Query 3 DPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAA 62 DP AWAYLS+V + C LA L VGPV+AA VR + + L + T AR +D AA Sbjct 5 DPRLLAWAYLSKVVQGACPPLAQLAAAVGPVDAARAVRERDLSSFLDRRTSARAHLDTAA 64 Query 63 DDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPR 122 DL+LL GGRL+TPDDDEWP AF G+ R G +PL LW LG +DE+A R Sbjct 65 RDLDLLRSMGGRLVTPDDDEWPRWRLLAFDALGS-GRDDG-APLALWVLGDRSVDELAAR 122 Query 123 AAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLA 182 + AVVGTRAA++YGEHV A++A LA +VSG A+G+D AAHRAAL G+TVAVLA Sbjct 123 SVAVVGTRAASSYGEHVTAEIAGDLAADGWTIVSGAAFGVDAAAHRAALGVGGLTVAVLA 182 Query 183 GGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGL 242 G D YPAGH LL +IA+ G + +EYPPG PAR+RFL RNRLVA ++ A VVVEAG Sbjct 183 CGVDRAYPAGHGRLLQQIARDGAVISEYPPGTSPARYRFLARNRLVAGLSEAVVVVEAGW 242 Query 243 RSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHG-AELVTRADDIVEFVGHIGE 301 RSGA NTA W R LGR V AVPGPVTS+AS GCH ++R G A LV+ A D+VE G IG Sbjct 243 RSGARNTATWGRRLGRPVLAVPGPVTSAASTGCHRMIREGEARLVSSAADVVEEAGPIG- 301 Query 302 LAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGL 361 + G+ P ALDVL VYEALP G + E++ SG+ +V L +LE+ G Sbjct 302 VDGEGLGPARALDVLQGDAATVYEALPAAGTCSTRELSEESGVTIERVRAVLPVLELDGF 361 Query 362 AECRDGRW 369 + W Sbjct 362 VGSDESGW 369 >gi|325673466|ref|ZP_08153157.1| DNA protecting protein DprA [Rhodococcus equi ATCC 33707] gi|325555487|gb|EGD25158.1| DNA protecting protein DprA [Rhodococcus equi ATCC 33707] Length=373 Score = 322 bits (825), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 192/368 (53%), Positives = 236/368 (65%), Gaps = 4/368 (1%) Query 3 DPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAA 62 DP AWAYLS+V + C LA L VGPV+AA VR + + L + T AR +D AA Sbjct 5 DPRLLAWAYLSKVVQGACPPLAQLAAAVGPVDAARAVRERDLSSFLDRRTSARAHLDTAA 64 Query 63 DDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPR 122 DL+LL GGRL+TPDDDEWP AF G+ R G +PL LW LG +DE+A R Sbjct 65 RDLDLLRSMGGRLVTPDDDEWPRWRLLAFDALGS-GRDDG-APLALWVLGDRSVDELAAR 122 Query 123 AAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLA 182 + AVVGTRAA++YGEHV A++ LA +VSG A+G+D AAHRAAL G+TVAVLA Sbjct 123 SVAVVGTRAASSYGEHVTAEIVGDLAADGWTIVSGAAFGVDAAAHRAALGVGGLTVAVLA 182 Query 183 GGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGL 242 G D YPAGH LL +IA+ G + +EYPPG PAR+RFL RNRLVA ++ A VVVEAG Sbjct 183 CGVDRAYPAGHGRLLQQIARDGAVISEYPPGTSPARYRFLARNRLVAGLSEAVVVVEAGW 242 Query 243 RSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHG-AELVTRADDIVEFVGHIGE 301 RSGA NTA W R LGR V AVPGPVTS+AS GCH ++R G A LV+ A D+VE G IG Sbjct 243 RSGARNTATWGRRLGRPVLAVPGPVTSAASTGCHRMIREGEARLVSSAADVVEEAGPIG- 301 Query 302 LAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGL 361 + G+ P ALDVL VYEALP G + E++ SG+ +V L +LE+ G Sbjct 302 VDGEGLGPARALDVLQGDAATVYEALPAAGTCSTRELSEESGVTIERVRAVLPVLELDGF 361 Query 362 AECRDGRW 369 + W Sbjct 362 VGSDESGW 369 >gi|407886682|emb|CCH34325.1| hypothetical protein BN6_70900 [Saccharothrix espanaensis DSM 44229] Length=381 Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 187/350 (54%), Positives = 225/350 (65%), Gaps = 2/350 (0%) Query 1 MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR 60 M D A AYLSRVAEPP LAA V VGPV AA VRRGQV + T ARR DR Sbjct 1 MSDEVRLARAYLSRVAEPPAGALAAFVSAVGPVRAAALVRRGQVPGAVDSQTSARRAEDR 60 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 A DL + GGRL+ P+D+EWP F A A A+ CG +PL LW G A L + Sbjct 61 AEADLAAMAELGGRLVVPEDEEWPAWPFTALDQAAAQGLRCGVAPLALWVRGEAELSTLT 120 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 RA AVVG+R++T YG+HVAA+ GLA V VVSG AYGIDGAAHR AL + G T+AV Sbjct 121 ERAVAVVGSRSSTGYGQHVAAEFGHGLAASGVTVVSGAAYGIDGAAHRGALAAGGPTIAV 180 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 LA G DI YP GH LL RI HG++ +EYPPG++PARHRFLTRNRL+AA VVVEA Sbjct 181 LACGVDIAYPRGHQGLLERIPHHGLVVSEYPPGLQPARHRFLTRNRLIAAFGEGTVVVEA 240 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAEL-VTRADDIVEFVGHI 299 G RSGA NTAA ALGRV+ AVPGP+TSS+S+GCH LLR G L V+ +++E G + Sbjct 241 GRRSGAKNTAASTSALGRVLMAVPGPITSSSSSGCHDLLRSGEALAVSSVAEVIESTGRL 300 Query 300 GELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQV 349 G + R EA R V+EALP A + + ++V SG+ A+V Sbjct 301 GVDLVEATRNTEVGLPQGEALR-VFEALPLDSATSAEAVSVESGVELARV 349 >gi|377567910|ref|ZP_09797112.1| DNA processing protein [Gordonia terrae NBRC 100016] gi|377534933|dbj|GAB42277.1| DNA processing protein [Gordonia terrae NBRC 100016] Length=380 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 192/381 (51%), Positives = 241/381 (64%), Gaps = 25/381 (6%) Query 4 PTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQV---GNELAQHTGARREIDR 60 P + AWAYL+RVAEPPCA L ALV +GPVEAA +RR V + + T AR + D Sbjct 11 PESIAWAYLARVAEPPCAALIALVDDIGPVEAASAIRRRTVPGSHDAVLAATAARCDSDC 70 Query 61 AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA 120 A DDL+ R G RL+T D EWP + A A AR G PL LW GPARLD++A Sbjct 71 ARDDLDTADRIGARLVTRADPEWPAWSMLALGQADTAAR--GGEPLALWVRGPARLDDLA 128 Query 121 PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV 180 + A++G+RAA+AYGEHV LA+GL+ AV+SGGA+GIDGAAHRA + + G+T AV Sbjct 129 AASVALIGSRAASAYGEHVTQTLASGLSGEGFAVLSGGAFGIDGAAHRAVVAAGGVTAAV 188 Query 181 LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA 240 +A G D YPA HSALL IA+ G + +EYPPG A+HRFLTRNRLVAA++ A VVVEA Sbjct 189 MACGIDRDYPASHSALLTAIARTGAVISEYPPGTTAAKHRFLTRNRLVAAMSGATVVVEA 248 Query 241 GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG 300 G RSGAANTAAWAR LGR + AVPGPVTS+ S GCH ++ ADD+ V + Sbjct 249 GRRSGAANTAAWARKLGRPLGAVPGPVTSATSVGCHRMI---------ADDLAVLVSDVA 299 Query 301 ELAGDEPRPGAA----------LDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVL 350 + + RP D L + +V++A+PGRGA IDEIA +GL V Sbjct 300 SIV-NLVRPDGGGDIGRGRTKPTDGLDAEQLRVHDAIPGRGAVGIDEIAFAAGLDIGAVR 358 Query 351 GPLAILEVAGLAECRDGRWRI 371 LA L++ G + DGRWR+ Sbjct 359 SALAHLDIRGYVQNVDGRWRL 379 Lambda K H 0.320 0.135 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1025443310010 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Oct 14, 2012 4:13 PM Number of letters in database: 7,218,481,314 Number of sequences in database: 21,062,489 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40