BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2898c

Length=128
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15842441|ref|NP_337478.1|  hypothetical protein MT2966 [Mycoba...   258    2e-67
gi|15610035|ref|NP_217414.1|  hypothetical protein Rv2898c [Mycob...   257    4e-67
gi|289553313|ref|ZP_06442523.1|  conserved hypothetical protein [...   257    5e-67
gi|308232278|ref|ZP_07415523.2|  hypothetical protein TMAG_01099 ...   250    5e-65
gi|308369894|ref|ZP_07419430.2|  hypothetical protein TMBG_03042 ...   246    1e-63
gi|240170583|ref|ZP_04749242.1|  hypothetical protein MkanA1_1481...   199    8e-50
gi|118463594|ref|YP_882924.1|  hypothetical protein MAV_3752 [Myc...   197    5e-49
gi|254776197|ref|ZP_05217713.1|  hypothetical protein MaviaA2_162...   194    5e-48
gi|296171471|ref|ZP_06852757.1|  possible endonuclease [Mycobacte...   193    8e-48
gi|342858252|ref|ZP_08714907.1|  hypothetical protein MCOL_05241 ...   191    4e-47
gi|118617633|ref|YP_905965.1|  hypothetical protein MUL_2060 [Myc...   189    1e-46
gi|108798953|ref|YP_639150.1|  hypothetical protein Mmcs_1985 [My...   169    1e-40
gi|254821958|ref|ZP_05226959.1|  hypothetical protein MintA_18642...   169    1e-40
gi|126434553|ref|YP_001070244.1|  hypothetical protein Mjls_1965 ...   167    3e-40
gi|118469536|ref|YP_886847.1|  hypothetical protein MSMEG_2508 [M...   167    4e-40
gi|333991259|ref|YP_004523873.1|  hypothetical protein JDM601_261...   165    2e-39
gi|145224720|ref|YP_001135398.1|  hypothetical protein Mflv_4140 ...   164    4e-39
gi|120403193|ref|YP_953022.1|  hypothetical protein Mvan_2202 [My...   156    9e-37
gi|169630295|ref|YP_001703944.1|  hypothetical protein MAB_3214c ...   132    1e-29
gi|325673468|ref|ZP_08153159.1|  endonuclease [Rhodococcus equi A...   122    2e-26
gi|312139227|ref|YP_004006563.1|  hypothetical protein REQ_18100 ...   121    4e-26
gi|336459048|gb|EGO37998.1|  hypothetical protein MAPs_07050 [Myc...   119    2e-25
gi|54026114|ref|YP_120356.1|  hypothetical protein nfa41430 [Noca...   113    1e-23
gi|257055035|ref|YP_003132867.1|  hypothetical protein Svir_09830...   107    6e-22
gi|226305956|ref|YP_002765916.1|  hypothetical protein RER_24690 ...   106    1e-21
gi|229491459|ref|ZP_04385283.1|  conserved hypothetical protein [...   106    1e-21
gi|340776032|gb|EGR98082.1|  TIGR00252 family protein [Propioniba...   105    2e-21
gi|282854574|ref|ZP_06263909.1|  conserved hypothetical protein [...   105    3e-21
gi|50842911|ref|YP_056138.1|  hypothetical protein PPA1431 [Propi...   103    6e-21
gi|111023510|ref|YP_706482.1|  hypothetical protein RHA1_ro06551 ...   103    7e-21
gi|313829533|gb|EFS67247.1|  conserved hypothetical protein TIGR0...   103    7e-21
gi|315226784|ref|ZP_07868572.1|  endonuclease [Parascardovia dent...   103    8e-21
gi|294787613|ref|ZP_06752866.1|  putative endonuclease [Parascard...   103    1e-20
gi|226366012|ref|YP_002783795.1|  hypothetical protein ROP_66030 ...   103    1e-20
gi|336117317|ref|YP_004572084.1|  hypothetical protein MLP_16670 ...   103    1e-20
gi|314923939|gb|EFS87770.1|  conserved hypothetical protein TIGR0...   102    1e-20
gi|289427780|ref|ZP_06429491.1|  conserved hypothetical protein T...   102    2e-20
gi|335053622|ref|ZP_08546457.1|  TIGR00252 family protein [Propio...   102    2e-20
gi|335277852|gb|AEH29757.1|  hypothetical protein TIB1ST10_07350 ...   102    2e-20
gi|284032635|ref|YP_003382566.1|  hypothetical protein Kfla_4750 ...   101    4e-20
gi|315106703|gb|EFT78679.1|  conserved hypothetical protein TIGR0...  99.8    1e-19
gi|262202032|ref|YP_003273240.1|  hypothetical protein Gbro_2095 ...  99.4    1e-19
gi|296268976|ref|YP_003651608.1|  hypothetical protein Tbis_0992 ...  98.6    3e-19
gi|260907249|ref|ZP_05915571.1|  hypothetical protein BlinB_18076...  98.2    3e-19
gi|2251165|emb|CAB10643.1|  hypothetical protein MLCB250.49 [Myco...  98.2    4e-19
gi|284992381|ref|YP_003410935.1|  hypothetical protein Gobs_3998 ...  97.8    4e-19
gi|271963372|ref|YP_003337568.1|  hypothetical protein Sros_1836 ...  97.8    5e-19
gi|331698496|ref|YP_004334735.1|  hypothetical protein Psed_4735 ...  97.8    5e-19
gi|15827845|ref|NP_302108.1|  hypothetical protein ML1607 [Mycoba...  97.4    5e-19
gi|309811486|ref|ZP_07705268.1|  TIGR00252 family protein [Dermac...  97.4    6e-19


>gi|15842441|ref|NP_337478.1| hypothetical protein MT2966 [Mycobacterium tuberculosis CDC1551]
 gi|148824087|ref|YP_001288841.1| hypothetical protein TBFG_12912 [Mycobacterium tuberculosis F11]
 gi|167969527|ref|ZP_02551804.1| hypothetical protein MtubH3_16481 [Mycobacterium tuberculosis 
H37Ra]
 19 more sequence titles
 Length=141

 Score =  258 bits (659),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)

Query  1    MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  60
            MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV
Sbjct  14   MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  73

Query  61   KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE  120
            KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE
Sbjct  74   KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE  133

Query  121  LTHLQGIG  128
            LTHLQGIG
Sbjct  134  LTHLQGIG  141


>gi|15610035|ref|NP_217414.1| hypothetical protein Rv2898c [Mycobacterium tuberculosis H37Rv]
 gi|31794074|ref|NP_856567.1| hypothetical protein Mb2922c [Mycobacterium bovis AF2122/97]
 gi|121638779|ref|YP_979003.1| hypothetical protein BCG_2919c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 39 more sequence titles
 Length=128

 Score =  257 bits (656),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)

Query  1    MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  60
            MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV
Sbjct  1    MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  60

Query  61   KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE  120
            KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE
Sbjct  61   KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE  120

Query  121  LTHLQGIG  128
            LTHLQGIG
Sbjct  121  LTHLQGIG  128


>gi|289553313|ref|ZP_06442523.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289437945|gb|EFD20438.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
Length=133

 Score =  257 bits (656),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)

Query  1    MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  60
            MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV
Sbjct  6    MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  65

Query  61   KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE  120
            KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE
Sbjct  66   KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE  125

Query  121  LTHLQGIG  128
            LTHLQGIG
Sbjct  126  LTHLQGIG  133


>gi|308232278|ref|ZP_07415523.2| hypothetical protein TMAG_01099 [Mycobacterium tuberculosis SUMu001]
 gi|308375918|ref|ZP_07445535.2| hypothetical protein TMGG_02432 [Mycobacterium tuberculosis SUMu007]
 gi|308214468|gb|EFO73867.1| hypothetical protein TMAG_01099 [Mycobacterium tuberculosis SUMu001]
 gi|308344819|gb|EFP33670.1| hypothetical protein TMGG_02432 [Mycobacterium tuberculosis SUMu007]
Length=125

 Score =  250 bits (639),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 124/125 (99%), Positives = 125/125 (100%), Gaps = 0/125 (0%)

Query  4    LKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTR  63
            +KTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTR
Sbjct  1    MKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTR  60

Query  64   TGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTH  123
            TGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTH
Sbjct  61   TGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTH  120

Query  124  LQGIG  128
            LQGIG
Sbjct  121  LQGIG  125


>gi|308369894|ref|ZP_07419430.2| hypothetical protein TMBG_03042 [Mycobacterium tuberculosis SUMu002]
 gi|308371170|ref|ZP_07424055.2| hypothetical protein TMCG_02148 [Mycobacterium tuberculosis SUMu003]
 gi|308372288|ref|ZP_07428094.2| hypothetical protein TMDG_00090 [Mycobacterium tuberculosis SUMu004]
 13 more sequence titles
 Length=122

 Score =  246 bits (627),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%)

Query  7    MTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGD  66
            MTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGD
Sbjct  1    MTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGD  60

Query  67   GYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQG  126
            GYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQG
Sbjct  61   GYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQG  120

Query  127  IG  128
            IG
Sbjct  121  IG  122


>gi|240170583|ref|ZP_04749242.1| hypothetical protein MkanA1_14815 [Mycobacterium kansasii ATCC 
12478]
Length=119

 Score =  199 bits (507),  Expect = 8e-50, Method: Compositional matrix adjust.
 Identities = 100/122 (82%), Positives = 109/122 (90%), Gaps = 3/122 (2%)

Query  7    MTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGD  66
            MTR QLGA+GE LAVD+LT +GLRILNRNWRCRYGELDVIACD   R+VVFVEVKTRTGD
Sbjct  1    MTRAQLGALGEQLAVDHLTGLGLRILNRNWRCRYGELDVIACDPGARSVVFVEVKTRTGD  60

Query  67   GYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQG  126
            GYGGLAHAVTE KVRRLRRLAGLWLA Q++RWAAVRIDVIGVR+G +   R PELTHL+G
Sbjct  61   GYGGLAHAVTEPKVRRLRRLAGLWLAGQDQRWAAVRIDVIGVRIGRR---RVPELTHLKG  117

Query  127  IG  128
            IG
Sbjct  118  IG  119


>gi|118463594|ref|YP_882924.1| hypothetical protein MAV_3752 [Mycobacterium avium 104]
 gi|189040301|sp|A0QJ36.1|Y3752_MYCA1 RecName: Full=UPF0102 protein MAV_3752
 gi|118164881|gb|ABK65778.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=128

 Score =  197 bits (500),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 99/120 (83%), Positives = 108/120 (90%), Gaps = 3/120 (2%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R+QLGAMGEALAVD+LT MGLR+L+RNWRCRYGELD+IACD AT TVVFVEVKTRTGDGY
Sbjct  12   RIQLGAMGEALAVDHLTRMGLRVLHRNWRCRYGELDIIACDDATSTVVFVEVKTRTGDGY  71

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGIG  128
            GGL  AVT RKVRRLRRLAGLWLA Q+ RWAA+RIDVIGVRVG +   RTPE+THLQGIG
Sbjct  72   GGLPQAVTPRKVRRLRRLAGLWLAGQDRRWAAIRIDVIGVRVGRR---RTPEITHLQGIG  128


>gi|254776197|ref|ZP_05217713.1| hypothetical protein MaviaA2_16213 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=128

 Score =  194 bits (492),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 98/120 (82%), Positives = 107/120 (90%), Gaps = 3/120 (2%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R+QLGAMGEALAVD+LT MGLR+L+RNWRCRYGELD+IACD AT TVVFVEVKTRTGDGY
Sbjct  12   RIQLGAMGEALAVDHLTRMGLRVLHRNWRCRYGELDIIACDDATSTVVFVEVKTRTGDGY  71

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGIG  128
            GGL  AVT RKVRRLRRLAGLWLA Q+  WAA+RIDVIGVRVG +   RTPE+THLQGIG
Sbjct  72   GGLPQAVTPRKVRRLRRLAGLWLAGQDRGWAAIRIDVIGVRVGRR---RTPEITHLQGIG  128


>gi|296171471|ref|ZP_06852757.1| possible endonuclease [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894157|gb|EFG73917.1| possible endonuclease [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=128

 Score =  193 bits (490),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 103/128 (81%), Positives = 110/128 (86%), Gaps = 3/128 (2%)

Query  1    MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  60
            MTT  TMTR+QLGAMGEALAVD+LT MGLRIL+RNWRCRYGELDVIACD ATRT VFVEV
Sbjct  4    MTTETTMTRLQLGAMGEALAVDHLTRMGLRILHRNWRCRYGELDVIACDEATRTAVFVEV  63

Query  61   KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE  120
            KTRTGDGYGGLA+AVTERKVRRLRRLA LWLA Q+ RWAA+RIDVI          RTPE
Sbjct  64   KTRTGDGYGGLAYAVTERKVRRLRRLAALWLAGQDTRWAALRIDVI---RVRVGRRRTPE  120

Query  121  LTHLQGIG  128
            +THLQGIG
Sbjct  121  ITHLQGIG  128


>gi|342858252|ref|ZP_08714907.1| hypothetical protein MCOL_05241 [Mycobacterium colombiense CECT 
3035]
 gi|342133956|gb|EGT87136.1| hypothetical protein MCOL_05241 [Mycobacterium colombiense CECT 
3035]
Length=125

 Score =  191 bits (484),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 99/128 (78%), Positives = 110/128 (86%), Gaps = 3/128 (2%)

Query  1    MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  60
            MTT  TMTR+QLGAMGEALA D+L  MG RI+ RNWRCRYGELD+IA D AT TVVFVEV
Sbjct  1    MTTETTMTRIQLGAMGEALAADHLMRMGFRIVARNWRCRYGELDIIARDDATSTVVFVEV  60

Query  61   KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE  120
            KTRTGDGYGGLA+AVT RKV RLRRLAGLWLA Q++R AA+RIDVIGVRVG +   RTPE
Sbjct  61   KTRTGDGYGGLAYAVTPRKVLRLRRLAGLWLAGQDQRCAAIRIDVIGVRVGRR---RTPE  117

Query  121  LTHLQGIG  128
            +THL+GIG
Sbjct  118  ITHLRGIG  125


>gi|118617633|ref|YP_905965.1| hypothetical protein MUL_2060 [Mycobacterium ulcerans Agy99]
 gi|183981825|ref|YP_001850116.1| hypothetical protein MMAR_1812 [Mycobacterium marinum M]
 gi|189039451|sp|A0PQ75.1|Y2060_MYCUA RecName: Full=UPF0102 protein MUL_2060
 gi|238689246|sp|B2HJM5.1|Y1812_MYCMM RecName: Full=UPF0102 protein MMAR_1812
 gi|118569743|gb|ABL04494.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
 gi|183175151|gb|ACC40261.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=122

 Score =  189 bits (479),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 94/125 (76%), Positives = 109/125 (88%), Gaps = 3/125 (2%)

Query  4    LKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTR  63
            +KT+TR+QLGA+GE LAV++L+  GL+IL RNWRCRYGELDVIAC+AATRTVVFVEVKTR
Sbjct  1    MKTLTRMQLGALGEQLAVEHLSGQGLQILTRNWRCRYGELDVIACEAATRTVVFVEVKTR  60

Query  64   TGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTH  123
            TGDGYGGLA AVTE KVRRLRRLAGLWLA Q+  WAAVR+DVIGVR+G   +   PE+TH
Sbjct  61   TGDGYGGLAQAVTEGKVRRLRRLAGLWLAGQDRGWAAVRLDVIGVRIGRSAN---PEITH  117

Query  124  LQGIG  128
            L G+G
Sbjct  118  LMGVG  122


>gi|108798953|ref|YP_639150.1| hypothetical protein Mmcs_1985 [Mycobacterium sp. MCS]
 gi|119868068|ref|YP_938020.1| hypothetical protein Mkms_2031 [Mycobacterium sp. KMS]
 gi|123178986|sp|Q1BAJ0.1|Y1985_MYCSS RecName: Full=UPF0102 protein Mmcs_1985
 gi|189039436|sp|A1UEH2.1|Y2031_MYCSK RecName: Full=UPF0102 protein Mkms_2031
 gi|108769372|gb|ABG08094.1| protein of unknown function UPF0102 [Mycobacterium sp. MCS]
 gi|119694157|gb|ABL91230.1| protein of unknown function UPF0102 [Mycobacterium sp. KMS]
Length=135

 Score =  169 bits (428),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 85/128 (67%), Positives = 102/128 (80%), Gaps = 3/128 (2%)

Query  1    MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  60
            +  + T TR  +GA+GE LAV +L S+G+R+L RNWRCRYGELDVIA D A R VVFVEV
Sbjct  11   LAPMTTWTRAAIGALGEDLAVKHLDSLGMRVLERNWRCRYGELDVIAEDPAARAVVFVEV  70

Query  61   KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE  120
            KTRT D +GG+A AVT +KVRRLRRLAGLWLA ++ERWAAVRIDVIGVR+G +    TPE
Sbjct  71   KTRTTDHFGGVAEAVTPQKVRRLRRLAGLWLAGRDERWAAVRIDVIGVRIGRQA---TPE  127

Query  121  LTHLQGIG  128
            +THL G+ 
Sbjct  128  ITHLTGVA  135


>gi|254821958|ref|ZP_05226959.1| hypothetical protein MintA_18642 [Mycobacterium intracellulare 
ATCC 13950]
Length=116

 Score =  169 bits (428),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 86/101 (86%), Positives = 92/101 (92%), Gaps = 1/101 (0%)

Query  10   VQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYG  69
            +QLGAMGEALAVD+LT  GLRIL+RNWRCRYGELD+IACD A  T VFVEVKTRTGDGYG
Sbjct  17   IQLGAMGEALAVDHLTRAGLRILHRNWRCRYGELDIIACDRAG-TAVFVEVKTRTGDGYG  75

Query  70   GLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRV  110
            GLAHAVT RKVRRLRRLAGLWLA Q+ RWAA+RIDVIGVRV
Sbjct  76   GLAHAVTPRKVRRLRRLAGLWLAGQDRRWAAIRIDVIGVRV  116


>gi|126434553|ref|YP_001070244.1| hypothetical protein Mjls_1965 [Mycobacterium sp. JLS]
 gi|189039418|sp|A3PXX6.1|Y1965_MYCSJ RecName: Full=UPF0102 protein Mjls_1965
 gi|126234353|gb|ABN97753.1| protein of unknown function UPF0102 [Mycobacterium sp. JLS]
Length=135

 Score =  167 bits (424),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 84/128 (66%), Positives = 101/128 (79%), Gaps = 3/128 (2%)

Query  1    MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  60
            +  + T TR  +GA+GE LAV +L S+G+R+L RNWRCRYGELDVIA D A R VVFVEV
Sbjct  11   LAPMTTWTRAAIGALGEDLAVKHLDSLGMRVLERNWRCRYGELDVIAEDPAARAVVFVEV  70

Query  61   KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE  120
            KTRT D +GG+  AVT +KVRRLRRLAGLWLA ++ERWAAVRIDVIGVR+G +    TPE
Sbjct  71   KTRTTDHFGGVVQAVTPQKVRRLRRLAGLWLAGRDERWAAVRIDVIGVRIGRQA---TPE  127

Query  121  LTHLQGIG  128
            +THL G+ 
Sbjct  128  ITHLTGVA  135


>gi|118469536|ref|YP_886847.1| hypothetical protein MSMEG_2508 [Mycobacterium smegmatis str. 
MC2 155]
 gi|189039705|sp|A0QVA9.1|Y2508_MYCS2 RecName: Full=UPF0102 protein MSMEG_2508
 gi|118170823|gb|ABK71719.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=124

 Score =  167 bits (424),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 81/125 (65%), Positives = 102/125 (82%), Gaps = 3/125 (2%)

Query  4    LKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTR  63
            + ++TR +LGA+GE +AV++L ++GL+ L RNWRCRYGELD+IA DAAT TVVFVEVKTR
Sbjct  3    MSSLTRAELGALGEEVAVEHLAALGLKTLARNWRCRYGELDIIAEDAATGTVVFVEVKTR  62

Query  64   TGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTH  123
            +GDG+GGLA AVT +KVRR+RRLA +WLA Q+  WA +RIDVIGVRVG     R PE+ H
Sbjct  63   SGDGFGGLAEAVTPQKVRRIRRLAAIWLAAQDAHWAVLRIDVIGVRVG---RSRDPEIVH  119

Query  124  LQGIG  128
            L G+G
Sbjct  120  LAGVG  124


>gi|333991259|ref|YP_004523873.1| hypothetical protein JDM601_2619 [Mycobacterium sp. JDM601]
 gi|333487227|gb|AEF36619.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=122

 Score =  165 bits (417),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 84/124 (68%), Positives = 97/124 (79%), Gaps = 3/124 (2%)

Query  4    LKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTR  63
            + TMTR +LGA+GE LAVD+L   G  IL RNWRCRYGELDVIA D A   VVFVEVKTR
Sbjct  1    MTTMTRAELGALGEQLAVDHLLGQGWTILARNWRCRYGELDVIADDPAAGAVVFVEVKTR  60

Query  64   TGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTH  123
            TGDG+GGLA+AV   KVRR+RRLAGLWLA Q+  W  VR+DVIGVR+G     RTPE+TH
Sbjct  61   TGDGFGGLAYAVPPEKVRRVRRLAGLWLAGQQSHWVEVRVDVIGVRIG---RCRTPEITH  117

Query  124  LQGI  127
            L+G+
Sbjct  118  LRGV  121


>gi|145224720|ref|YP_001135398.1| hypothetical protein Mflv_4140 [Mycobacterium gilvum PYR-GCK]
 gi|315445050|ref|YP_004077929.1| hypothetical protein Mspyr1_34830 [Mycobacterium sp. Spyr1]
 gi|189040278|sp|A4TEA7.1|Y4140_MYCGI RecName: Full=UPF0102 protein Mflv_4140
 gi|145217206|gb|ABP46610.1| protein of unknown function UPF0102 [Mycobacterium gilvum PYR-GCK]
 gi|315263353|gb|ADU00095.1| conserved hypothetical protein TIGR00252 [Mycobacterium sp. Spyr1]
Length=123

 Score =  164 bits (415),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 80/124 (65%), Positives = 100/124 (81%), Gaps = 3/124 (2%)

Query  5    KTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRT  64
            +T TR  +GA+GE LAVDYL  +GLR+L RNWRCRYGELDV+  D A + VVFVEVKTRT
Sbjct  3    RTDTRAGVGALGEQLAVDYLQGLGLRVLARNWRCRYGELDVVVADDAVQAVVFVEVKTRT  62

Query  65   GDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHL  124
             D +GG+A AVT  KVRRLRRLAGLWL++Q+ RW +VR+DV+ VR+G    GR+PELTH+
Sbjct  63   TDRFGGVAEAVTPVKVRRLRRLAGLWLSEQDARWESVRLDVVTVRIG---QGRSPELTHI  119

Query  125  QGIG  128
            +G+G
Sbjct  120  EGVG  123


>gi|120403193|ref|YP_953022.1| hypothetical protein Mvan_2202 [Mycobacterium vanbaalenii PYR-1]
 gi|189039777|sp|A1T766.1|Y2202_MYCVP RecName: Full=UPF0102 protein Mvan_2202
 gi|119956011|gb|ABM13016.1| protein of unknown function UPF0102 [Mycobacterium vanbaalenii 
PYR-1]
Length=121

 Score =  156 bits (395),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 79/122 (65%), Positives = 96/122 (79%), Gaps = 5/122 (4%)

Query  6    TMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTG  65
            T +R ++GA+GE LAVDYL  +GLR+L RNWRCRYGELDVIA D   R VVF+EVKTRT 
Sbjct  4    TESRAEIGALGEQLAVDYLQGLGLRVLARNWRCRYGELDVIAADG--RAVVFIEVKTRTT  61

Query  66   DGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQ  125
            D +GG+A AVT  KVRRLRRLAG+WLA Q   WAAVRIDV+ VR+G +   R PE+TH++
Sbjct  62   DRFGGVAQAVTPTKVRRLRRLAGVWLAQQPGHWAAVRIDVVTVRIGRR---RVPEVTHIK  118

Query  126  GI  127
            G+
Sbjct  119  GV  120


>gi|169630295|ref|YP_001703944.1| hypothetical protein MAB_3214c [Mycobacterium abscessus ATCC 
19977]
 gi|169242262|emb|CAM63290.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=120

 Score =  132 bits (333),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 69/124 (56%), Positives = 88/124 (71%), Gaps = 6/124 (4%)

Query  5    KTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRT  64
             +++R Q+G  GE LA DYL   G  +L+RNWRCR+GELD++A       +VFVEVKTRT
Sbjct  3    HSLSRSQIGIHGEDLAADYLRQHGFTVLDRNWRCRHGELDIVA--VCGDLLVFVEVKTRT  60

Query  65   GDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHL  124
            G  +G  A AVT  K+RRLRRLAG+WLA Q   W++VRIDVI VR+    +G TPELTH+
Sbjct  61   GQRFGTPAEAVTYAKLRRLRRLAGIWLAAQGGSWSSVRIDVIEVRL----AGATPELTHI  116

Query  125  QGIG  128
             G+G
Sbjct  117  HGVG  120


>gi|325673468|ref|ZP_08153159.1| endonuclease [Rhodococcus equi ATCC 33707]
 gi|325555489|gb|EGD25160.1| endonuclease [Rhodococcus equi ATCC 33707]
Length=118

 Score =  122 bits (305),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 65/118 (56%), Positives = 80/118 (68%), Gaps = 5/118 (4%)

Query  10   VQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYG  69
            + LGAMGE LA   LT+ G+RIL+RNWRCR+GELD+IA D    T+VFVEVKTR+G G+G
Sbjct  5    LALGAMGEELAASALTAAGMRILDRNWRCRHGELDLIAVDG--DTIVFVEVKTRSGLGFG  62

Query  70   GLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
              A AVT  K RR+R LA  WLAD +  W  VR DV+ V V   +  R P +THL  +
Sbjct  63   SPAEAVTYAKQRRIRMLAQRWLADSDRHWPHVRFDVVAVLV---DRRREPAVTHLPAV  117


>gi|312139227|ref|YP_004006563.1| hypothetical protein REQ_18100 [Rhodococcus equi 103S]
 gi|311888566|emb|CBH47878.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=118

 Score =  121 bits (303),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 64/118 (55%), Positives = 80/118 (68%), Gaps = 5/118 (4%)

Query  10   VQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYG  69
            + LGAMGE LA   LT+ G+RIL+RNWRCR+GELD++A D    T+VFVEVKTR+G G+G
Sbjct  5    LALGAMGEELAASALTAAGMRILDRNWRCRHGELDLVAVDG--DTIVFVEVKTRSGLGFG  62

Query  70   GLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
              A AVT  K RR+R LA  WLAD +  W  VR DV+ V V   +  R P +THL  +
Sbjct  63   SPAEAVTYAKQRRIRMLAQRWLADSDRHWPHVRFDVVAVLV---DRRREPAVTHLPAV  117


>gi|336459048|gb|EGO37998.1| hypothetical protein MAPs_07050 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=77

 Score =  119 bits (298),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 63/78 (81%), Positives = 67/78 (86%), Gaps = 3/78 (3%)

Query  51   ATRTVVFVEVKTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRV  110
            AT TVVFVEVKTRTGDGYGGL  AVT RKVRRLRRLAGLWLA Q+  WAA+RIDVIGVRV
Sbjct  3    ATSTVVFVEVKTRTGDGYGGLPQAVTPRKVRRLRRLAGLWLAGQDRGWAAIRIDVIGVRV  62

Query  111  GPKNSGRTPELTHLQGIG  128
            G +   RTPE+THLQGIG
Sbjct  63   GRR---RTPEITHLQGIG  77


>gi|54026114|ref|YP_120356.1| hypothetical protein nfa41430 [Nocardia farcinica IFM 10152]
 gi|81373731|sp|Q5YS49.1|Y4143_NOCFA RecName: Full=UPF0102 protein NFA_41430
 gi|54017622|dbj|BAD58992.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=127

 Score =  113 bits (282),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 61/116 (53%), Positives = 77/116 (67%), Gaps = 5/116 (4%)

Query  12   LGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGGL  71
            LGA GE LA  +L   G+ I+ RNWRCRYGELD+IA DA  +T  FVEVKTR G G+G  
Sbjct  16   LGAHGEELAARFLRDAGMEIVARNWRCRYGELDLIARDA--QTTAFVEVKTRRGLGFGTP  73

Query  72   AHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
            A AVT  K +R+RRLA LWLA+Q+  W  +R DV+ V + P   G  P + HL+ +
Sbjct  74   AEAVTFTKRQRIRRLALLWLAEQDGPWQQIRFDVVSVLMTP---GHRPVIDHLKAV  126


>gi|257055035|ref|YP_003132867.1| hypothetical protein Svir_09830 [Saccharomonospora viridis DSM 
43017]
 gi|256584907|gb|ACU96040.1| conserved hypothetical protein TIGR00252 [Saccharomonospora viridis 
DSM 43017]
Length=125

 Score =  107 bits (267),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 74/122 (61%), Gaps = 5/122 (4%)

Query  5    KTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRT  64
            K  +RV LG  GE LAV++L   GL IL RNWRCR GELD++A D   RT+V  EVKTR+
Sbjct  7    KGESRVALGRRGEDLAVEHLRRQGLVILERNWRCREGELDILATDG--RTLVVCEVKTRS  64

Query  65   GDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHL  124
            G GYG    AVT+ K  R+RRL   WLA +   W  +R DVI +   PK     P L H+
Sbjct  65   GRGYGIPTEAVTQDKRNRIRRLTLRWLASRRVAWCPLRFDVIAIECSPKEP---PRLRHV  121

Query  125  QG  126
             G
Sbjct  122  VG  123


>gi|226305956|ref|YP_002765916.1| hypothetical protein RER_24690 [Rhodococcus erythropolis PR4]
 gi|226185073|dbj|BAH33177.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=123

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/113 (51%), Positives = 70/113 (62%), Gaps = 5/113 (4%)

Query  12   LGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGGL  71
            LGA GE +AV++L   GL I+ RNWRCRYGELDV+A       +VFVEVKTR+G GYG  
Sbjct  12   LGARGEDVAVEFLVDAGLEIVERNWRCRYGELDVVATSG--DRIVFVEVKTRSGVGYGSP  69

Query  72   AHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHL  124
            A +VT  K RR+R LA  WL D    W+ VR DV+ V +G       P + H 
Sbjct  70   AESVTFAKQRRIRVLAMQWLTDSGRSWSRVRFDVVAVLIGRDG---VPSVEHF  119


>gi|229491459|ref|ZP_04385283.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229321744|gb|EEN87541.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=123

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/113 (51%), Positives = 71/113 (63%), Gaps = 5/113 (4%)

Query  12   LGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGGL  71
            LGA GE +AV++L   GL I+ RNWRCRYGELDV+A   +   +VFVEVKTR+G GYG  
Sbjct  12   LGARGEDVAVEFLIDAGLEIVERNWRCRYGELDVVAT--SGDRIVFVEVKTRSGVGYGSP  69

Query  72   AHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHL  124
            A +VT  K RR+R LA  WL D    W+ VR DV+ V +G       P + H 
Sbjct  70   AESVTFAKQRRIRVLAMQWLTDSGRSWSRVRFDVVAVLIGRDG---VPSVEHF  119


>gi|340776032|gb|EGR98082.1| TIGR00252 family protein [Propionibacterium acnes SK182B-JCVI]
Length=139

 Score =  105 bits (263),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 57/119 (48%), Positives = 76/119 (64%), Gaps = 5/119 (4%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R   GA GE LA +YL S+G  I+ RNW C  GE+D++A +   +TVVF+EVK R+G G+
Sbjct  25   RPAFGAWGEDLAAEYLESLGWTIIARNWACDVGEIDLVAREG--QTVVFIEVKARSGTGF  82

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
            G    ++T  KVR+L  LA  WL  Q+E   +VRID IGV V P   G  P +TH++GI
Sbjct  83   GDPLESITTAKVRKLHELALTWLVSQDEGAHSVRIDAIGVMVRP---GTKPSITHVRGI  138


>gi|282854574|ref|ZP_06263909.1| conserved hypothetical protein [Propionibacterium acnes J139]
 gi|282582156|gb|EFB87538.1| conserved hypothetical protein [Propionibacterium acnes J139]
 gi|314981834|gb|EFT25927.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
HL110PA3]
 gi|315090699|gb|EFT62675.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
HL110PA4]
Length=140

 Score =  105 bits (261),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 58/119 (49%), Positives = 76/119 (64%), Gaps = 5/119 (4%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R   GA GE LA  Y+ S+G  I+ RNW C  GE+D+IA D   +TVVF+EVK R+G G+
Sbjct  26   RPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEIDLIARD--DQTVVFIEVKARSGTGF  83

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
            G    ++T  KVR+L  LA  WL +Q+E   +VRID IGV V P   G  P +TH++GI
Sbjct  84   GDPLESITTAKVRKLHELALAWLVNQDEGVHSVRIDAIGVMVRP---GAEPTVTHVRGI  139


>gi|50842911|ref|YP_056138.1| hypothetical protein PPA1431 [Propionibacterium acnes KPA171202]
 gi|289426447|ref|ZP_06428190.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
SK187]
 gi|335051496|ref|ZP_08544415.1| TIGR00252 family protein [Propionibacterium sp. 409-HC1]
 29 more sequence titles
 Length=140

 Score =  103 bits (258),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 57/119 (48%), Positives = 76/119 (64%), Gaps = 5/119 (4%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R   GA GE LA  Y+ S+G  I+ RNW C  GE+D+IA D   +TVVF+EVK R+G G+
Sbjct  26   RPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEIDLIARD--DQTVVFIEVKARSGTGF  83

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
            G    ++T  KVR+L  LA  WL +Q++   +VRID IGV V P   G  P +TH++GI
Sbjct  84   GDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDAIGVMVRP---GAEPTVTHVRGI  139


>gi|111023510|ref|YP_706482.1| hypothetical protein RHA1_ro06551 [Rhodococcus jostii RHA1]
 gi|122955109|sp|Q0S2B2.1|Y6551_RHOSR RecName: Full=UPF0102 protein RHA1_ro06551
 gi|110823040|gb|ABG98324.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=118

 Score =  103 bits (258),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 73/114 (65%), Gaps = 5/114 (4%)

Query  12   LGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGGL  71
            LGA GE LA  YLT  G+ I++RNWR RYGE+D+IA +     +VFVEVKTR G GYG  
Sbjct  7    LGAHGEDLAARYLTEAGMEIVDRNWRSRYGEVDLIAAEGDW--LVFVEVKTRRGLGYGSP  64

Query  72   AHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQ  125
            A AVT  K RR+R LA  WL D    W+ VR DV+ + +G    G  P++ H++
Sbjct  65   AEAVTFSKQRRIRLLAVEWLRDSGRHWSRVRFDVVAIMIG---HGPQPQIEHVR  115


>gi|313829533|gb|EFS67247.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
HL063PA2]
 gi|315108927|gb|EFT80903.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
HL030PA2]
Length=140

 Score =  103 bits (258),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 57/119 (48%), Positives = 76/119 (64%), Gaps = 5/119 (4%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R   GA GE LA  Y+ S+G  I+ RNW C  GE+D+IA D   +TVVF+EVK R+G G+
Sbjct  26   RPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEIDLIARD--DQTVVFIEVKARSGTGF  83

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
            G    ++T  KVR+L  LA  WL +Q++   +VRID IGV V P   G  P +TH++GI
Sbjct  84   GDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDAIGVMVRP---GAEPTVTHVRGI  139


>gi|315226784|ref|ZP_07868572.1| endonuclease [Parascardovia denticolens DSM 10105]
 gi|315120916|gb|EFT84048.1| endonuclease [Parascardovia denticolens DSM 10105]
Length=150

 Score =  103 bits (257),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 56/130 (44%), Positives = 77/130 (60%), Gaps = 4/130 (3%)

Query  2    TTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFV---  58
            T L  +T  ++G +GE +A DYL S+G RIL+RNW CRYGELD++A      +  F+   
Sbjct  21   TRLNDLTGKEVGRIGEDIAADYLGSLGYRILDRNWNCRYGELDIVALSPPFHSKQFIVVA  80

Query  59   EVKTRTGDGYGGLAHAVTERKVRRLRRLAGLWL-ADQEERWAAVRIDVIGVRVGPKNSGR  117
            EVKTR  D  G    AVT+RK+  LRR A LWL A        +RIDVIG+ +     G 
Sbjct  81   EVKTRRTDICGSPLEAVTDRKLAHLRRAAFLWLDAHPHFPHHPMRIDVIGISLHEDEHGY  140

Query  118  TPELTHLQGI  127
             P ++H++ +
Sbjct  141  APIISHVKEV  150


>gi|294787613|ref|ZP_06752866.1| putative endonuclease [Parascardovia denticolens F0305]
 gi|294484969|gb|EFG32604.1| putative endonuclease [Parascardovia denticolens F0305]
Length=132

 Score =  103 bits (256),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 56/130 (44%), Positives = 77/130 (60%), Gaps = 4/130 (3%)

Query  2    TTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFV---  58
            T L  +T  ++G +GE +A DYL S+G RIL+RNW CRYGELD++A      +  F+   
Sbjct  3    TRLNDLTGKEVGRIGEDIAADYLGSLGYRILDRNWNCRYGELDIVALSPPFHSKQFIVVA  62

Query  59   EVKTRTGDGYGGLAHAVTERKVRRLRRLAGLWL-ADQEERWAAVRIDVIGVRVGPKNSGR  117
            EVKTR  D  G    AVT+RK+  LRR A LWL A        +RIDVIG+ +     G 
Sbjct  63   EVKTRRTDICGSPLEAVTDRKLAHLRRAAFLWLDAHPHFPHHPMRIDVIGISLHEDEHGY  122

Query  118  TPELTHLQGI  127
             P ++H++ +
Sbjct  123  APIISHVKEV  132


>gi|226366012|ref|YP_002783795.1| hypothetical protein ROP_66030 [Rhodococcus opacus B4]
 gi|254806564|sp|C1B2T3.1|Y6603_RHOOB RecName: Full=UPF0102 protein ROP_66030
 gi|226244502|dbj|BAH54850.1| hypothetical protein [Rhodococcus opacus B4]
Length=118

 Score =  103 bits (256),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 56/114 (50%), Positives = 73/114 (65%), Gaps = 5/114 (4%)

Query  12   LGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGGL  71
            LGA GE LA  YLT  G+ I++RNWR RYGE+D+IA +     +VFVEVKTR G GYG  
Sbjct  7    LGAHGEDLAARYLTEAGMEIIDRNWRSRYGEVDLIAAEGDW--LVFVEVKTRRGLGYGTP  64

Query  72   AHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQ  125
            A AVT  K RR+R LA  WL +    W+ VR DV+ + +G    G  P++ H++
Sbjct  65   AEAVTFSKQRRIRLLAVEWLRESSRHWSRVRFDVVAIMIG---HGPQPQIEHVR  115


>gi|336117317|ref|YP_004572084.1| hypothetical protein MLP_16670 [Microlunatus phosphovorus NM-1]
 gi|334685096|dbj|BAK34681.1| hypothetical protein MLP_16670 [Microlunatus phosphovorus NM-1]
Length=125

 Score =  103 bits (256),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 76/124 (62%), Gaps = 6/124 (4%)

Query  8    TRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAA--TRTVVFVEVKTRTG  65
            TR ++GA GE LA   L S G+ IL+RNW CR+GELDV+A D +   RT VF EVK RTG
Sbjct  4    TRNEIGATGETLAALELQSQGMEILDRNWSCRWGELDVVALDPSGGRRTAVFCEVKCRTG  63

Query  66   DGYGGLAHAVTERKVRRLRRLAGLWLADQEE-RWAAVRIDVIGVRVGPKNSGRTPELTHL  124
             GYG    ++T  KV RLR+LA  WL+         VR+D IGV +      R P LTH+
Sbjct  64   RGYGDPLESLTYAKVSRLRKLAAEWLSQHPGLALDGVRLDAIGVLL---ERDRQPVLTHV  120

Query  125  QGIG  128
             GIG
Sbjct  121  VGIG  124


>gi|314923939|gb|EFS87770.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
HL001PA1]
 gi|314966116|gb|EFT10215.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
HL082PA2]
 gi|315094911|gb|EFT66887.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
HL060PA1]
 gi|315104183|gb|EFT76159.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
HL050PA2]
 gi|327328007|gb|EGE69776.1| putative endonuclease [Propionibacterium acnes HL103PA1]
Length=140

 Score =  102 bits (255),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 57/119 (48%), Positives = 75/119 (64%), Gaps = 5/119 (4%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R   GA GE LA  Y+ S+G  I+ RNW C  GE+D+IA D   +TVVF+EVK R+  G+
Sbjct  26   RPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEIDLIARD--DQTVVFIEVKARSDTGF  83

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
            G    ++T  KVR+L  LA  WL +Q+E   +VRID IGV V P   G  P +TH++GI
Sbjct  84   GDPLESITTAKVRKLHELALAWLVNQDEGVHSVRIDAIGVMVRP---GAEPTVTHVRGI  139


>gi|289427780|ref|ZP_06429491.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
J165]
 gi|295130968|ref|YP_003581631.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
SK137]
 gi|289159044|gb|EFD07237.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
J165]
 32 more sequence titles
 Length=140

 Score =  102 bits (255),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/119 (48%), Positives = 75/119 (64%), Gaps = 5/119 (4%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R   GA GE LA  Y+ S+G  I+ RNW C  GE+D+IA D   +TVVF+EVK R G G+
Sbjct  26   RPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEIDLIARD--DQTVVFIEVKARLGTGF  83

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
            G    ++T  KVR+L  LA  WL +Q++   +VRID IGV V P   G  P +TH++GI
Sbjct  84   GDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDAIGVMVRP---GAEPTVTHVRGI  139


>gi|335053622|ref|ZP_08546457.1| TIGR00252 family protein [Propionibacterium sp. 434-HC2]
 gi|333766697|gb|EGL43984.1| TIGR00252 family protein [Propionibacterium sp. 434-HC2]
Length=140

 Score =  102 bits (253),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 56/119 (48%), Positives = 75/119 (64%), Gaps = 5/119 (4%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R   G  GE LA  Y+ S+G  I+ RNW C  GE+D+IA D   +TVVF+EVK R+G G+
Sbjct  26   RPAFGVWGEDLAAQYVESLGWTIIARNWTCDVGEIDLIARD--DQTVVFIEVKARSGTGF  83

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
            G    ++T  KVR+L  LA  WL +Q++   +VRID IGV V P   G  P +TH++GI
Sbjct  84   GDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDAIGVMVRP---GAEPTVTHVRGI  139


>gi|335277852|gb|AEH29757.1| hypothetical protein TIB1ST10_07350 [Propionibacterium acnes 
6609]
Length=139

 Score =  102 bits (253),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 56/119 (48%), Positives = 75/119 (64%), Gaps = 5/119 (4%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R   G  GE LA  Y+ S+G  I+ RNW C  GE+D+IA D   +TVVF+EVK R+G G+
Sbjct  25   RPAFGVWGEDLAAQYVESLGWTIIARNWTCDVGEIDLIARD--DQTVVFIEVKARSGTGF  82

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
            G    ++T  KVR+L  LA  WL +Q++   +VRID IGV V P   G  P +TH++GI
Sbjct  83   GDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDAIGVMVRP---GAEPTVTHVRGI  138


>gi|284032635|ref|YP_003382566.1| hypothetical protein Kfla_4750 [Kribbella flavida DSM 17836]
 gi|283811928|gb|ADB33767.1| protein of unknown function UPF0102 [Kribbella flavida DSM 17836]
Length=118

 Score =  101 bits (251),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 56/121 (47%), Positives = 73/121 (61%), Gaps = 5/121 (4%)

Query  8    TRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDG  67
            T+  +G  GE LA ++LT  G  IL RNWRC  GE+D++A +   R +V  EVKTR G  
Sbjct  3    TKDAVGQYGEQLAAEHLTQAGFAILARNWRCELGEIDIVAREG--RALVVCEVKTRRGLN  60

Query  68   YGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
            YG    ++T RK+  LRRL G WL + E R   VRIDV+ V V P   G  P + HL+G+
Sbjct  61   YGSPLESITYRKLSTLRRLVGRWLQEHEVRPPEVRIDVVSVLVPP---GGAPTVEHLRGV  117

Query  128  G  128
            G
Sbjct  118  G  118


>gi|315106703|gb|EFT78679.1| conserved hypothetical protein TIGR00252 [Propionibacterium acnes 
HL030PA1]
Length=110

 Score = 99.8 bits (247),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 54/112 (49%), Positives = 73/112 (66%), Gaps = 5/112 (4%)

Query  16   GEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGGLAHAV  75
            GE LA  Y+ S+G  I+ RNW C  GE+D+IA D   +TVVF+EVK R+G G+G    ++
Sbjct  3    GEDLAAQYVESLGWTIIARNWTCDVGEIDLIARD--DQTVVFIEVKARSGTGFGDPLESI  60

Query  76   TERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGI  127
            T  KVR+L  LA  WL +Q++   +VRID IGV V P   G  P +TH++GI
Sbjct  61   TTAKVRKLHELALAWLVNQDDGVHSVRIDAIGVMVRP---GAEPTVTHVRGI  109


>gi|262202032|ref|YP_003273240.1| hypothetical protein Gbro_2095 [Gordonia bronchialis DSM 43247]
 gi|262085379|gb|ACY21347.1| protein of unknown function UPF0102 [Gordonia bronchialis DSM 
43247]
Length=137

 Score = 99.4 bits (246),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 48/107 (45%), Positives = 70/107 (66%), Gaps = 2/107 (1%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R  +G +GE +A +++T+ G R+L+RNWR RYGELD+IA D   R +V VEVKTR    Y
Sbjct  17   RRHIGHLGEDIAAEFVTNRGWRVLHRNWRNRYGELDLIAADG--RVLVVVEVKTRASLMY  74

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNS  115
                 AVT  K+ R+R+L  +WL++Q   W+ +R DVI V++ P + 
Sbjct  75   SDPLEAVTPAKLSRMRKLTRMWLSEQNGSWSQIRFDVISVQLDPHHP  121


>gi|296268976|ref|YP_003651608.1| hypothetical protein Tbis_0992 [Thermobispora bispora DSM 43833]
 gi|296091763|gb|ADG87715.1| protein of unknown function UPF0102 [Thermobispora bispora DSM 
43833]
Length=117

 Score = 98.6 bits (244),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 54/98 (56%), Positives = 70/98 (72%), Gaps = 2/98 (2%)

Query  11   QLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGG  70
            +LG  GE +A +YL + G+RIL RNWRCR GE+D++A D +T  +V VEVKTR+G  +G 
Sbjct  6    RLGRDGERVAEEYLRAEGMRILARNWRCREGEIDILAQDGST--LVVVEVKTRSGRSHGT  63

Query  71   LAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGV  108
               AVT  K+RRLR LA  WLA Q ER+ AVRIDV+ +
Sbjct  64   AFEAVTPAKLRRLRMLAARWLAAQGERFDAVRIDVVAL  101


>gi|260907249|ref|ZP_05915571.1| hypothetical protein BlinB_18076 [Brevibacterium linens BL2]
Length=132

 Score = 98.2 bits (243),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 49/112 (44%), Positives = 73/112 (66%), Gaps = 7/112 (6%)

Query  12   LGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGGL  71
            LG  GE LA D+L   G+ I+ RN+RC  GE+D+IA D  T  +VFVEVKTR     G  
Sbjct  20   LGQTGEDLAADFLQRQGMVIIERNFRCPRGEIDIIAKDGDT--IVFVEVKTRRTLAQGSP  77

Query  72   AHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTH  123
              AVT  K+R++R L+G+WL+ Q++ +A++RID +G+ + P+     P+ +H
Sbjct  78   LEAVTAAKLRKIRTLSGIWLSQQKDFFASIRIDALGIVMDPE-----PDYSH  124


>gi|2251165|emb|CAB10643.1| hypothetical protein MLCB250.49 [Mycobacterium leprae]
Length=117

 Score = 98.2 bits (243),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 56/96 (59%), Positives = 65/96 (68%), Gaps = 1/96 (1%)

Query  1    MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  60
            MTT K MTRVQL AMGE  AVD LT MGLR L+ NWRCRYGE DVIA + A RTVV   +
Sbjct  22   MTTHKAMTRVQLEAMGEVFAVDNLTRMGLRGLHCNWRCRYGECDVIASETAHRTVV-SRL  80

Query  61   KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEE  96
            ++       G   +  E+KVR LR LAGLW A+Q+E
Sbjct  81   RSIAATVMEGSRRSAPEQKVRWLRWLAGLWPANQDE  116


>gi|284992381|ref|YP_003410935.1| hypothetical protein Gobs_3998 [Geodermatophilus obscurus DSM 
43160]
 gi|284065626|gb|ADB76564.1| protein of unknown function UPF0102 [Geodermatophilus obscurus 
DSM 43160]
Length=139

 Score = 97.8 bits (242),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 60/125 (48%), Positives = 73/125 (59%), Gaps = 5/125 (4%)

Query  2    TTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVK  61
            T  +  T   LGA GE +A  YLT  GLR+L+RNWRCR GELD++A D     +VF EVK
Sbjct  17   TVGRVRTTSDLGAHGERIAAAYLTDSGLRVLDRNWRCRDGELDIVARDGD--ALVFCEVK  74

Query  62   TRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPEL  121
            TR   G+G    AV   K RRLR LA  WLA  +ER   +R DV+GV V      R   +
Sbjct  75   TRRAVGFGHPVEAVGHVKQRRLRVLAQRWLAAHDERAPELRFDVVGVLV---RVDRPALV  131

Query  122  THLQG  126
            THL+ 
Sbjct  132  THLRA  136


>gi|271963372|ref|YP_003337568.1| hypothetical protein Sros_1836 [Streptosporangium roseum DSM 
43021]
 gi|270506547|gb|ACZ84825.1| conserved hypothetical protein [Streptosporangium roseum DSM 
43021]
Length=117

 Score = 97.8 bits (242),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 53/98 (55%), Positives = 71/98 (73%), Gaps = 2/98 (2%)

Query  11   QLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGG  70
            +LG  GE +AVDYL + G++IL+RNWRC  GE+DV+A +   R +V VEVKTR+G  +G 
Sbjct  6    ELGRHGEQVAVDYLLAHGMQILDRNWRCPDGEIDVVAREG--RALVVVEVKTRSGRTHGT  63

Query  71   LAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGV  108
               AVT  K+ RLRRL G WLA++ ER+ +VRIDVI +
Sbjct  64   AFEAVTVVKLARLRRLTGRWLAERRERFDSVRIDVIAL  101


>gi|331698496|ref|YP_004334735.1| hypothetical protein Psed_4735 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326953185|gb|AEA26882.1| UPF0102 protein yraN [Pseudonocardia dioxanivorans CB1190]
Length=118

 Score = 97.8 bits (242),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 53/112 (48%), Positives = 70/112 (63%), Gaps = 5/112 (4%)

Query  12   LGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGGL  71
            LG  GE +A +YL   GL +L+RNWRCR GELD+IA  +A   +V  EVKTR+G  +G  
Sbjct  7    LGRRGEDVAAEYLEKQGLVVLDRNWRCREGELDIIATGSAG--LVVCEVKTRSGTAFGEP  64

Query  72   AHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTH  123
            A AVT+RK+ R+RR+   WLA     W AVR DV+ + + P   GR   + H
Sbjct  65   AEAVTDRKIARIRRVTQAWLAAHGLPWCAVRFDVLAIVIEP---GRPATIQH  113


>gi|15827845|ref|NP_302108.1| hypothetical protein ML1607 [Mycobacterium leprae TN]
 gi|221230322|ref|YP_002503738.1| hypothetical protein MLBr_01607 [Mycobacterium leprae Br4923]
 gi|6919997|sp|O33024.2|Y1607_MYCLE RecName: Full=UPF0102 protein ML1607
 gi|13093397|emb|CAC30558.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219933429|emb|CAR71702.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=96

 Score = 97.4 bits (241),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 56/96 (59%), Positives = 65/96 (68%), Gaps = 1/96 (1%)

Query  1   MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV  60
           MTT K MTRVQL AMGE  AVD LT MGLR L+ NWRCRYGE DVIA + A RTVV   +
Sbjct  1   MTTHKAMTRVQLEAMGEVFAVDNLTRMGLRGLHCNWRCRYGECDVIASETAHRTVV-SRL  59

Query  61  KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEE  96
           ++       G   +  E+KVR LR LAGLW A+Q+E
Sbjct  60  RSIAATVMEGSRRSAPEQKVRWLRWLAGLWPANQDE  95


>gi|309811486|ref|ZP_07705268.1| TIGR00252 family protein [Dermacoccus sp. Ellin185]
 gi|308434537|gb|EFP58387.1| TIGR00252 family protein [Dermacoccus sp. Ellin185]
Length=165

 Score = 97.4 bits (241),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 57/102 (56%), Positives = 64/102 (63%), Gaps = 2/102 (1%)

Query  9    RVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY  68
            R  LGA GE  A  YL S+G  IL  NWRC  GE+DV+A D   R +V VEVKTR    +
Sbjct  51   RRTLGAQGERHACAYLASLGYEILETNWRCSEGEIDVVARDG--REIVVVEVKTRRSQRF  108

Query  69   GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRV  110
            G    AVT  K  RLRRLA LWL ++E   AAVRIDVIGV V
Sbjct  109  GPAVEAVTHEKHLRLRRLACLWLREREVSAAAVRIDVIGVDV  150



Lambda     K      H
   0.323    0.137    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128801298864


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40