BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2916c
Length=525
Score E
Sequences producing significant alignments: (Bits) Value
gi|308369898|ref|ZP_07419448.2| signal recognition particle prot... 1028 0.0
gi|15610053|ref|NP_217432.1| signal recognition particle protein... 1027 0.0
gi|308232280|ref|ZP_07415541.2| signal recognition particle prot... 1026 0.0
gi|306973321|ref|ZP_07485982.1| signal recognition particle prot... 1025 0.0
gi|253797996|ref|YP_003030997.1| signal recognition particle pro... 1025 0.0
gi|308375922|ref|ZP_07445553.2| signal recognition particle prot... 1012 0.0
gi|298526385|ref|ZP_07013794.1| signal peptide binding domain-co... 906 0.0
gi|118466702|ref|YP_882942.1| signal recognition particle protei... 895 0.0
gi|254776215|ref|ZP_05217731.1| signal recognition particle prot... 894 0.0
gi|41409081|ref|NP_961917.1| hypothetical protein MAP2983c [Myco... 892 0.0
gi|118617614|ref|YP_905946.1| signal recognition particle protei... 884 0.0
gi|240170562|ref|ZP_04749221.1| signal recognition particle prot... 882 0.0
gi|254821193|ref|ZP_05226194.1| signal recognition particle prot... 873 0.0
gi|342858233|ref|ZP_08714888.1| signal recognition particle prot... 870 0.0
gi|183981805|ref|YP_001850096.1| signal recognition particle pro... 865 0.0
gi|15827854|ref|NP_302117.1| signal recognition particle protein... 865 0.0
gi|145224761|ref|YP_001135439.1| signal recognition particle pro... 860 0.0
gi|296171453|ref|ZP_06852739.1| signal recognition particle prot... 850 0.0
gi|120403173|ref|YP_953002.1| signal recognition particle protei... 849 0.0
gi|108798927|ref|YP_639124.1| signal recognition particle subuni... 810 0.0
gi|118468367|ref|YP_886770.1| signal recognition particle protei... 803 0.0
gi|169630318|ref|YP_001703967.1| Signal recognition particle pro... 802 0.0
gi|54026131|ref|YP_120373.1| putative signal recognition particl... 797 0.0
gi|333991275|ref|YP_004523889.1| signal recognition particle pro... 769 0.0
gi|262202018|ref|YP_003273226.1| signal recognition particle pro... 764 0.0
gi|226365994|ref|YP_002783777.1| signal recognition particle pro... 762 0.0
gi|333919230|ref|YP_004492811.1| putative signal recognition par... 761 0.0
gi|111023492|ref|YP_706464.1| signal recognition particle protei... 759 0.0
gi|312140440|ref|YP_004007776.1| signal recognition particle pro... 759 0.0
gi|325675945|ref|ZP_08155628.1| signal recognition particle prot... 757 0.0
gi|226305929|ref|YP_002765889.1| signal recognition particle pro... 756 0.0
gi|296139328|ref|YP_003646571.1| signal recognition particle pro... 744 0.0
gi|343925317|ref|ZP_08764842.1| signal recognition particle prot... 725 0.0
gi|289755028|ref|ZP_06514406.1| signal recognition particle prot... 725 0.0
gi|319951000|ref|ZP_08024870.1| signal recognition particle prot... 722 0.0
gi|326382869|ref|ZP_08204559.1| signal recognition particle prot... 717 0.0
gi|331698510|ref|YP_004334749.1| signal recognition particle pro... 716 0.0
gi|257055023|ref|YP_003132855.1| signal recognition particle sub... 707 0.0
gi|324999618|ref|ZP_08120730.1| signal recognition particle prot... 706 0.0
gi|25028521|ref|NP_738575.1| putative signal recognition particl... 706 0.0
gi|256379924|ref|YP_003103584.1| signal recognition particle pro... 700 0.0
gi|300783873|ref|YP_003764164.1| signal recognition particle, su... 694 0.0
gi|19553259|ref|NP_601261.1| signal recognition particle GTPase ... 692 0.0
gi|344044732|gb|EGV40407.1| signal recognition particle protein ... 692 0.0
gi|145296022|ref|YP_001138843.1| hypothetical protein cgR_1945 [... 689 0.0
gi|258653309|ref|YP_003202465.1| signal recognition particle pro... 688 0.0
gi|302525168|ref|ZP_07277510.1| signal recognition particle prot... 683 0.0
gi|289759036|ref|ZP_06518414.1| signal recognition particle prot... 682 0.0
gi|336325840|ref|YP_004605806.1| signal recognition particle pro... 679 0.0
gi|227504770|ref|ZP_03934819.1| signal recognition particle prot... 678 0.0
>gi|308369898|ref|ZP_07419448.2| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu002]
gi|308371174|ref|ZP_07424073.2| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu003]
gi|308372291|ref|ZP_07428112.2| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu004]
7 more sequence titles
Length=528
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/525 (100%), Positives = 525/525 (100%), Gaps = 0/525 (0%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR
Sbjct 4 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 63
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL
Sbjct 64 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 123
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA
Sbjct 124 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 183
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA
Sbjct 184 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 243
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI
Sbjct 244 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 303
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP
Sbjct 304 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 363
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 364 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 423
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG
Sbjct 424 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 483
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK
Sbjct 484 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 528
>gi|15610053|ref|NP_217432.1| signal recognition particle protein [Mycobacterium tuberculosis
H37Rv]
gi|15842459|ref|NP_337496.1| signal recognition particle protein [Mycobacterium tuberculosis
CDC1551]
gi|31794092|ref|NP_856585.1| signal recognition particle protein [Mycobacterium bovis AF2122/97]
46 more sequence titles
Length=525
Score = 1027 bits (2656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/525 (99%), Positives = 525/525 (100%), Gaps = 0/525 (0%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR
Sbjct 1 MFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL
Sbjct 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA
Sbjct 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA
Sbjct 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI
Sbjct 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG
Sbjct 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK
Sbjct 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
>gi|308232280|ref|ZP_07415541.2| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu001]
gi|308380512|ref|ZP_07490199.2| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu011]
gi|308214486|gb|EFO73885.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu001]
gi|308361235|gb|EFP50086.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu011]
Length=528
Score = 1026 bits (2654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/525 (99%), Positives = 524/525 (99%), Gaps = 0/525 (0%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR
Sbjct 4 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 63
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL
Sbjct 64 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 123
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA
Sbjct 124 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 183
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA
Sbjct 184 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 243
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI
Sbjct 244 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 303
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP
Sbjct 304 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 363
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 364 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 423
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG
Sbjct 424 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 483
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
VPGMPGLAGLPGGLPDLSQMPKGLDELPPG ADFDLSKLKFPGKK
Sbjct 484 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGRADFDLSKLKFPGKK 528
>gi|306973321|ref|ZP_07485982.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu010]
gi|308357351|gb|EFP46202.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu010]
Length=525
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/525 (99%), Positives = 524/525 (99%), Gaps = 0/525 (0%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR
Sbjct 1 MFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL
Sbjct 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA
Sbjct 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA
Sbjct 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI
Sbjct 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG
Sbjct 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
VPGMPGLAGLPGGLPDLSQMPKGLDELPPG ADFDLSKLKFPGKK
Sbjct 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGRADFDLSKLKFPGKK 525
>gi|253797996|ref|YP_003030997.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
KZN 1435]
gi|289553295|ref|ZP_06442505.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
KZN 605]
gi|297635534|ref|ZP_06953314.1| signal recognition particle protein [Mycobacterium tuberculosis
KZN 4207]
gi|297732533|ref|ZP_06961651.1| signal recognition particle protein [Mycobacterium tuberculosis
KZN R506]
gi|313659865|ref|ZP_07816745.1| signal recognition particle protein [Mycobacterium tuberculosis
KZN V2475]
gi|253319499|gb|ACT24102.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
KZN 1435]
gi|289437927|gb|EFD20420.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
KZN 605]
gi|328457770|gb|AEB03193.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
KZN 4207]
Length=525
Score = 1025 bits (2649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/525 (99%), Positives = 524/525 (99%), Gaps = 0/525 (0%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLTAALQGLRGKGRLTDADIDATT EIRLALLEADVSLPVVRAFIHRIKERAR
Sbjct 1 MFESLSDRLTAALQGLRGKGRLTDADIDATTCEIRLALLEADVSLPVVRAFIHRIKERAR 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL
Sbjct 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA
Sbjct 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA
Sbjct 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI
Sbjct 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG
Sbjct 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK
Sbjct 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
>gi|308375922|ref|ZP_07445553.2| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu007]
gi|308377166|ref|ZP_07441361.2| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu008]
gi|308344837|gb|EFP33688.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu007]
gi|308348785|gb|EFP37636.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
SUMu008]
Length=517
Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/517 (99%), Positives = 517/517 (100%), Gaps = 0/517 (0%)
Query 9 LTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSAL 68
+TAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSAL
Sbjct 1 MTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSAL 60
Query 69 NPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKLAARLRGQG 128
NPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKLAARLRGQG
Sbjct 61 NPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKLAARLRGQG 120
Query 129 HTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAGLAEARAK 188
HTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAGLAEARAK
Sbjct 121 HTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAGLAEARAK 180
Query 189 HFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFGEGVGF 248
HFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFGEGVGF
Sbjct 181 HFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFGEGVGF 240
Query 249 TGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRILGMGDVLS 308
TGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRILGMGDVLS
Sbjct 241 TGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRILGMGDVLS 300
Query 309 LIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAAQMKDA 368
LIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAAQMKDA
Sbjct 301 LIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAAQMKDA 360
Query 369 LAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQLVERFFEAR 428
LAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQLVERFFEAR
Sbjct 361 LAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQLVERFFEAR 420
Query 429 KMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFGVPGMPGLA 488
KMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFGVPGMPGLA
Sbjct 421 KMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFGVPGMPGLA 480
Query 489 GLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
GLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK
Sbjct 481 GLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 517
>gi|298526385|ref|ZP_07013794.1| signal peptide binding domain-containing protein [Mycobacterium
tuberculosis 94_M4241A]
gi|298496179|gb|EFI31473.1| signal peptide binding domain-containing protein [Mycobacterium
tuberculosis 94_M4241A]
Length=462
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/462 (99%), Positives = 462/462 (100%), Gaps = 0/462 (0%)
Query 64 VSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKLAAR 123
+SSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKLAAR
Sbjct 1 MSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKLAAR 60
Query 124 LRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAGLA 183
LRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAGLA
Sbjct 61 LRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAGLA 120
Query 184 EARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFG 243
EARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFG
Sbjct 121 EARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFG 180
Query 244 EGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRILGM 303
EGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRILGM
Sbjct 181 EGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRILGM 240
Query 304 GDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAA 363
GDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAA
Sbjct 241 GDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAA 300
Query 364 QMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQLVER 423
QMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQLVER
Sbjct 301 QMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQLVER 360
Query 424 FFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFGVPG 483
FFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFGVPG
Sbjct 361 FFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFGVPG 420
Query 484 MPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
MPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK
Sbjct 421 MPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 462
>gi|118466702|ref|YP_882942.1| signal recognition particle protein [Mycobacterium avium 104]
gi|118167989|gb|ABK68886.1| signal recognition particle protein [Mycobacterium avium 104]
Length=517
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/525 (89%), Positives = 491/525 (94%), Gaps = 8/525 (1%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT+AL GLRGKGRLTDADI+ATTREIRLALLEADVSLPVVRAF+ RIKERA+
Sbjct 1 MFESLSDRLTSALAGLRGKGRLTDADIEATTREIRLALLEADVSLPVVRAFVTRIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVNEELI ILGGETR+LAFAKTPPTV+MLAGLQGSGKT+LAGKL
Sbjct 61 GAEVSGALNPAQQVVKIVNEELIGILGGETRQLAFAKTPPTVIMLAGLQGSGKTSLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AA LRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAA
Sbjct 121 AAWLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAQ 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEARAKH DVVIVDTAGRLGID+ELMAQAAAIRDAI+PDE+LFVLDAMIGQDAVTTA
Sbjct 181 GLAEARAKHHDVVIVDTAGRLGIDDELMAQAAAIRDAIDPDEILFVLDAMIGQDAVTTAE 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF EGVGFTGV LTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRM+SRI
Sbjct 241 AFREGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMSSRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDA+QAE AA KIG+GELTLEDFLEQMLA+RKMGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAEQAEAAAVKIGSGELTLEDFLEQMLAIRKMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMKDALA VDDKQLDR+QAIIRGMTP+ERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 361 GAGQMKDALAAVDDKQLDRLQAIIRGMTPEERADPKIINASRRLRIANGSGVTVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
V+RFFEARKMMSSMLGGMGIPG+GRKSATRK+K KK KKG RGPTPPKV+SP G
Sbjct 421 VDRFFEARKMMSSMLGGMGIPGLGRKSATRKAK-GAKGKAKKGKKGARGPTPPKVRSPLG 479
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
PGM P G PDLSQ+P+GL+ELPPGLADFDLSKLKFPG K
Sbjct 480 -PGM------PAGYPDLSQLPEGLNELPPGLADFDLSKLKFPGNK 517
>gi|254776215|ref|ZP_05217731.1| signal recognition particle protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length=517
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/525 (89%), Positives = 490/525 (94%), Gaps = 8/525 (1%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL GLRGKGRLTDADI+ATTREIRLALLEADVSLPVVRAF+ RIKERA+
Sbjct 1 MFESLSDRLTGALAGLRGKGRLTDADIEATTREIRLALLEADVSLPVVRAFVTRIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVNEELI ILGGETR+LAFAKTPPTV+MLAGLQGSGKT+LAGKL
Sbjct 61 GAEVSGALNPAQQVVKIVNEELIGILGGETRQLAFAKTPPTVIMLAGLQGSGKTSLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AA LRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAA
Sbjct 121 AAWLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAQ 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEARAKH DVVIVDTAGRLGID+ELMAQAAAIRDAI+PDE+LFVLDAMIGQDAVTTA
Sbjct 181 GLAEARAKHHDVVIVDTAGRLGIDDELMAQAAAIRDAIDPDEILFVLDAMIGQDAVTTAE 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF EGVGFTGV LTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRM+SRI
Sbjct 241 AFREGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMSSRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDA+QAE AA KIG+GELTLEDFLEQMLA+RKMGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAEQAEAAAVKIGSGELTLEDFLEQMLAIRKMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMKDALA VDDKQLDR+QAIIRGMTP+ERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 361 GAGQMKDALAAVDDKQLDRLQAIIRGMTPEERADPKIINASRRLRIANGSGVTVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
V+RFFEARKMMSSMLGGMGIPG+GRKSATRK+K KK KKG RGPTPPKV+SP G
Sbjct 421 VDRFFEARKMMSSMLGGMGIPGLGRKSATRKAK-GAKGKAKKGKKGARGPTPPKVRSPLG 479
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
PGM P G PDLSQ+P+GL+ELPPGLADFDLSKLKFPG K
Sbjct 480 -PGM------PAGYPDLSQLPEGLNELPPGLADFDLSKLKFPGNK 517
>gi|41409081|ref|NP_961917.1| hypothetical protein MAP2983c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397440|gb|AAS05300.1| Ffh [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336459026|gb|EGO37976.1| signal recognition particle protein [Mycobacterium avium subsp.
paratuberculosis S397]
Length=517
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/525 (89%), Positives = 490/525 (94%), Gaps = 8/525 (1%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL GLRGKGRLTDADI+ATTREIRLALLEADVSLPVVRAF+ RIKERA+
Sbjct 1 MFESLSDRLTGALAGLRGKGRLTDADIEATTREIRLALLEADVSLPVVRAFVTRIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVNEELI ILGGETR+LAFAKTPPTV+MLAGLQGSGKT+LAGKL
Sbjct 61 GAEVSGALNPAQQVVKIVNEELIGILGGETRQLAFAKTPPTVIMLAGLQGSGKTSLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AA LRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAA
Sbjct 121 AAWLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAQ 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEARAKH DVVIVDTAGRLGID+ELMAQAAAIRDAI+PDE+LFVLDAMIGQDAVTTA
Sbjct 181 GLAEARAKHHDVVIVDTAGRLGIDDELMAQAAAIRDAIDPDEILFVLDAMIGQDAVTTAE 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF EGVGFTGV LTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRM+SRI
Sbjct 241 AFREGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMSSRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDA+QAE AA KIG+GELTLEDFLEQMLA+RKMGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAEQAEAAAVKIGSGELTLEDFLEQMLAIRKMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMKDALA VDDKQLDR+QAIIRGMTP+ERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 361 GAGQMKDALAAVDDKQLDRLQAIIRGMTPEERADPKIINASRRLRIANGSGVTVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
V+RFFEARKMMSSMLGGMGIPG+GRKSATRK+K KK KKG RGPTPP+V+SP G
Sbjct 421 VDRFFEARKMMSSMLGGMGIPGLGRKSATRKAK-GAKGKAKKGKKGARGPTPPEVRSPLG 479
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
PGM P G PDLSQ+P+GL+ELPPGLADFDLSKLKFPG K
Sbjct 480 -PGM------PAGFPDLSQLPEGLNELPPGLADFDLSKLKFPGNK 517
>gi|118617614|ref|YP_905946.1| signal recognition particle protein Ffh [Mycobacterium ulcerans
Agy99]
gi|118569724|gb|ABL04475.1| signal recognition particle protein Ffh [Mycobacterium ulcerans
Agy99]
Length=523
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/526 (91%), Positives = 495/526 (95%), Gaps = 4/526 (0%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT ALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAF+HRIKERAR
Sbjct 1 MFESLSDRLTGALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFVHRIKERAR 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GA VS ALNPAQQVVKIVNEEL+ ILGG+TREL FAKTPPTVVMLAGLQGSGKTTLAGKL
Sbjct 61 GAVVSGALNPAQQVVKIVNEELVGILGGQTRELVFAKTPPTVVMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AARLRGQGHTPLLVACDLQRPAAVNQLQVVG+RAGVPVFAPH GASPESGPGDPVAVAAA
Sbjct 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGQRAGVPVFAPHLGASPESGPGDPVAVAAA 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEA+AKHFDVVIVDTAGRLGIDEELMAQA+AIR AINPDEVLFVLDAMIGQDAV TA
Sbjct 181 GLAEAQAKHFDVVIVDTAGRLGIDEELMAQASAIRKAINPDEVLFVLDAMIGQDAVATAQ 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI
Sbjct 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDA+QAE+AAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAEQAEQAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
G AQMKDALAEVDDK LDR+QAIIRGMTP+ERADPKIINASRRLRIANGSGV+VSEVNQL
Sbjct 361 GGAQMKDALAEVDDKHLDRIQAIIRGMTPEERADPKIINASRRLRIANGSGVSVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKS-KGAKGKSGKKSKKGTRGPTPPKVKSPF 479
V+RFFEARKMMSSMLGGMGIPG+GRKSATRKS K K G RGPTPPKVKSPF
Sbjct 421 VDRFFEARKMMSSMLGGMGIPGMGRKSATRKSKGAKGKAGKKGKKGGARGPTPPKVKSPF 480
Query 480 GVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
G+PGMPG+ G PDLSQMP+GLDELPPGLADFDLSKL FPGKK
Sbjct 481 GMPGMPGML---AGFPDLSQMPEGLDELPPGLADFDLSKLNFPGKK 523
>gi|240170562|ref|ZP_04749221.1| signal recognition particle protein Ffh [Mycobacterium kansasii
ATCC 12478]
Length=531
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/527 (92%), Positives = 505/527 (96%), Gaps = 3/527 (0%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT+ALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAF+HRIKERAR
Sbjct 1 MFESLSDRLTSALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFVHRIKERAR 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVN+ELI ILGG+TREL FAKTPPTV+MLAGLQGSGKTTLAGKL
Sbjct 61 GAEVSGALNPAQQVVKIVNDELIGILGGQTRELVFAKTPPTVIMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AARL+ QGHTPLLVACDLQRPAAVNQLQVVG+RAGV VFAPHPGASPESGPGDPVAVAAA
Sbjct 121 AARLKSQGHTPLLVACDLQRPAAVNQLQVVGQRAGVTVFAPHPGASPESGPGDPVAVAAA 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRD+I+PDEVLFVLDAMIGQDAV TA
Sbjct 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDSIDPDEVLFVLDAMIGQDAVATAQ 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AFGEGVGF+GV LTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI
Sbjct 241 AFGEGVGFSGVVLTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDAQ+AEEAA KIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAQRAEEAAVKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMK+ALAE+DDKQLDRVQAIIRGMTP+ERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 361 GAGQMKEALAEIDDKQLDRVQAIIRGMTPEERADPKIINASRRLRIANGSGVTVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
V+RFFEARKMMSSMLGGMGIPG+GRKSATRKSK A+GK+GKK KKG RGPTPPKVKSPFG
Sbjct 421 VDRFFEARKMMSSMLGGMGIPGLGRKSATRKSKAARGKAGKKGKKGARGPTPPKVKSPFG 480
Query 481 V---PGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
PGMPG+ G+P G PDLS MP+GLDELPPGLADFDLSKLKFPG
Sbjct 481 TPGMPGMPGMPGMPAGFPDLSHMPEGLDELPPGLADFDLSKLKFPGN 527
>gi|254821193|ref|ZP_05226194.1| signal recognition particle protein [Mycobacterium intracellulare
ATCC 13950]
Length=518
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/524 (90%), Positives = 494/524 (95%), Gaps = 7/524 (1%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL GLRGKGRLTDADI+ATTREIRLALLEADVSLPVVRAF+ RIK+RA+
Sbjct 1 MFESLSDRLTGALAGLRGKGRLTDADIEATTREIRLALLEADVSLPVVRAFVTRIKDRAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVNEELI ILGG+TR+LAFAKTPPTVVMLAGLQGSGKT+LAGKL
Sbjct 61 GAEVSGALNPAQQVVKIVNEELIGILGGQTRQLAFAKTPPTVVMLAGLQGSGKTSLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AA LRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPG SP SGPGDPVAVAAA
Sbjct 121 AAWLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGESPGSGPGDPVAVAAA 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
G+AEA AKHFDVVIVDTAGRLGID+ELMAQAAAIRDAI+PDEVLFVLDAMIGQDAVTTA
Sbjct 181 GIAEANAKHFDVVIVDTAGRLGIDDELMAQAAAIRDAIDPDEVLFVLDAMIGQDAVTTAE 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF EGVGFTGV LTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRM+SRI
Sbjct 241 AFREGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMSSRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDA+QAE AA KIG GELTLEDFLEQMLA+RKMGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAEQAEAAAVKIGTGELTLEDFLEQMLAIRKMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMKDALA+VDD+QLDR+QAIIRGMTP ERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 361 GAGQMKDALAQVDDRQLDRLQAIIRGMTPAERADPKIINASRRLRIANGSGVTVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
V+RFFEARKMMSSMLGGMGIPG+GRKSATRKSKGAKGK+GKK+KKG RGPTPPK ++P
Sbjct 421 VDRFFEARKMMSSMLGGMGIPGMGRKSATRKSKGAKGKAGKKAKKGGRGPTPPKARNPLA 480
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
AG+P G PDLSQMP+GL+ELPPGLADFDLSKLKFPGK
Sbjct 481 -------AGMPAGFPDLSQMPEGLNELPPGLADFDLSKLKFPGK 517
>gi|342858233|ref|ZP_08714888.1| signal recognition particle protein [Mycobacterium colombiense
CECT 3035]
gi|342133937|gb|EGT87117.1| signal recognition particle protein [Mycobacterium colombiense
CECT 3035]
Length=518
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/525 (89%), Positives = 492/525 (94%), Gaps = 7/525 (1%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL GLRGKGRLTDADI+ATTREIRLALLEADVSLPVVRAF+ RIK+RA+
Sbjct 1 MFESLSDRLTGALAGLRGKGRLTDADIEATTREIRLALLEADVSLPVVRAFVTRIKDRAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVNEELI ILGGETR+LAFAK PPTV+MLAGLQGSGKT+LAGKL
Sbjct 61 GAEVSGALNPAQQVVKIVNEELIGILGGETRQLAFAKAPPTVIMLAGLQGSGKTSLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
A+ LRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPG SP SGPGDPVAVAAA
Sbjct 121 ASWLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGESPGSGPGDPVAVAAA 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEARAKHFDVVIVDTAGRLGID+ELM+QAAAIR+AINPDEVLFVLDAMIGQDAVTTA
Sbjct 181 GLAEARAKHFDVVIVDTAGRLGIDDELMSQAAAIREAINPDEVLFVLDAMIGQDAVTTAE 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF EGVGFTGV LTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRM+SRI
Sbjct 241 AFREGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMSSRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDA+QAE AA KIG+GELTLEDFLEQMLA+RKMGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAEQAEAAAVKIGSGELTLEDFLEQMLAIRKMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMKDALA+VDD QLDR+QAIIRGMTP ERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 361 GAGQMKDALAQVDDSQLDRLQAIIRGMTPAERADPKIINASRRLRIANGSGVTVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
V+RFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGK+GKK KK RGPTPPK ++P
Sbjct 421 VDRFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKAGKKGKKAGRGPTPPKARNPL- 479
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
+ G+P G PDLSQMP+GL+ELPPGLADFDLSKLKFPGK
Sbjct 480 ------MQGMPAGFPDLSQMPEGLNELPPGLADFDLSKLKFPGKN 518
>gi|183981805|ref|YP_001850096.1| signal recognition particle protein Ffh [Mycobacterium marinum
M]
gi|183175131|gb|ACC40241.1| signal recognition particle protein Ffh [Mycobacterium marinum
M]
Length=529
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/529 (91%), Positives = 498/529 (95%), Gaps = 4/529 (0%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT ALQGLRGKGRLTDADIDAT REIRLALLEADVSLPVVRAF+HRIKERAR
Sbjct 1 MFESLSDRLTGALQGLRGKGRLTDADIDATAREIRLALLEADVSLPVVRAFVHRIKERAR 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GA VS ALNPAQQVVKIVNEEL+ ILGG+TREL FAKTPPTVVMLAGLQGSGKTTLAGKL
Sbjct 61 GAVVSGALNPAQQVVKIVNEELVGILGGQTRELVFAKTPPTVVMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AARLRGQGHTPLLVACDLQRPAAVNQLQVVG+RAGVPVFAPHPGASPESGPGDPVAVAAA
Sbjct 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGQRAGVPVFAPHPGASPESGPGDPVAVAAA 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEA+AKHFDVVIVDTAGRLGIDEELMAQA+AIR AINPDEVLFVLDAMIGQDAV TA
Sbjct 181 GLAEAQAKHFDVVIVDTAGRLGIDEELMAQASAIRKAINPDEVLFVLDAMIGQDAVATAQ 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI
Sbjct 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDA+QAE+AAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAEQAEQAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
G AQMKDALAEVDDK LDR+QAIIRGMTP+ERADPKIINASRRLRIANGSGV+VSEVNQL
Sbjct 361 GGAQMKDALAEVDDKHLDRIQAIIRGMTPEERADPKIINASRRLRIANGSGVSVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKS-KGAKGKSGKKSKKGTRGPTPPKVKSPF 479
V+RFFEARKMMSSMLGGMGIPG+GRKSATRKS K K G RGPTPPKVKSPF
Sbjct 421 VDRFFEARKMMSSMLGGMGIPGMGRKSATRKSKGAKGKAGKKGKKGGARGPTPPKVKSPF 480
Query 480 ---GVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
G+PGMPG+ G+P G PDLSQMP+GLDELPPGLADFDLSKL FPGKK
Sbjct 481 GMPGMPGMPGMPGMPAGFPDLSQMPEGLDELPPGLADFDLSKLNFPGKK 529
>gi|15827854|ref|NP_302117.1| signal recognition particle protein [Mycobacterium leprae TN]
gi|221230331|ref|YP_002503747.1| signal recognition particle protein [Mycobacterium leprae Br4923]
gi|3334343|sp|O33013.1|SRP54_MYCLE RecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four
homolog
gi|2251154|emb|CAB10614.1| Ffh protein [Mycobacterium leprae]
gi|13093406|emb|CAC30573.1| signal recognition particle protein [Mycobacterium leprae]
gi|219933438|emb|CAR71717.1| signal recognition particle protein [Mycobacterium leprae Br4923]
Length=521
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/526 (88%), Positives = 486/526 (93%), Gaps = 8/526 (1%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLS+RLT +QGLRGKGRLTDADI+ATTREIRLAL EADVSLPVVRAF+HRIKERAR
Sbjct 1 MFESLSNRLTGVIQGLRGKGRLTDADIEATTREIRLALFEADVSLPVVRAFVHRIKERAR 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
G EVS+ALNPAQQ+VKIVNEELI ILGGETR+LAFAKTPPTVVMLAGLQGSGKTTLAGKL
Sbjct 61 GTEVSAALNPAQQIVKIVNEELIGILGGETRQLAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
A RLR QGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASP+SGPGDPVAVA+A
Sbjct 121 AVRLRRQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPDSGPGDPVAVASA 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GL EARAKHFDVVIVDTAGRLGID+ELMAQA AIR+AINPDEVLFVLDAMIGQDAVTTAA
Sbjct 181 GLVEARAKHFDVVIVDTAGRLGIDDELMAQAGAIREAINPDEVLFVLDAMIGQDAVTTAA 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AFG GVGFTGV LTKLDGDARGGAALSVREVTGVPILFA+TGEKL+DFDVFHPDRMASRI
Sbjct 241 AFGAGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFATTGEKLDDFDVFHPDRMASRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDA+QAE AAAKI AGELTLEDFLEQMLAVRKMG IGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAEQAEAAAAKIVAGELTLEDFLEQMLAVRKMGLIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA Q+K+ L +VDDKQLDR+QAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 361 GAGQVKEVLEQVDDKQLDRLQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
V+RFFEARKMMSS+LGGMGIPG+GRKSATRKSKG KGK + PT PKV+SPFG
Sbjct 421 VDRFFEARKMMSSVLGGMGIPGMGRKSATRKSKGGKGKKRARG------PTSPKVRSPFG 474
Query 481 --VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
PGMP + +P PDLSQMP GL+ELPPGLA FDLSKLKFPGK
Sbjct 475 PARPGMPDMMNMPPSFPDLSQMPDGLNELPPGLAAFDLSKLKFPGK 520
>gi|145224761|ref|YP_001135439.1| signal recognition particle protein [Mycobacterium gilvum PYR-GCK]
gi|315445091|ref|YP_004077970.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mycobacterium
sp. Spyr1]
gi|145217247|gb|ABP46651.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mycobacterium
gilvum PYR-GCK]
gi|315263394|gb|ADU00136.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mycobacterium
sp. Spyr1]
Length=535
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/537 (83%), Positives = 475/537 (89%), Gaps = 19/537 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL GLRGKGRLTDADIDAT REIRLALLEADVSLPVVRAFI RIK+RA+
Sbjct 1 MFESLSDRLTGALSGLRGKGRLTDADIDATAREIRLALLEADVSLPVVRAFISRIKDRAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
G EVS+ALNPAQQVVKIVNEEL++ILGGETR+LAFA+ PPTV+MLAGLQGSGKTTLAGKL
Sbjct 61 GVEVSAALNPAQQVVKIVNEELVAILGGETRQLAFARNPPTVIMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASP------------- 167
A L+ QGHTPLLVACDLQRP AVNQLQ+VGERAGV VFAPHPG SP
Sbjct 121 AKWLKAQGHTPLLVACDLQRPGAVNQLQIVGERAGVHVFAPHPGVSPAGETIEQMTAHAR 180
Query 168 --ESGPGDPVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLF 225
+G GDPV+VAAAGLAEAR+K +DVVIVDTAGRLGID+ELMAQAAAIRDA+NPDE+LF
Sbjct 181 SETAGAGDPVSVAAAGLAEARSKLYDVVIVDTAGRLGIDQELMAQAAAIRDAVNPDEILF 240
Query 226 VLDAMIGQDAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKL 285
VLDAMIGQDAVTTA AF EGVGFTGV LTKLDGDARGGAALSVREVTG PILFAS GEKL
Sbjct 241 VLDAMIGQDAVTTADAFREGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASAGEKL 300
Query 286 EDFDVFHPDRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLA 345
EDFDVFHPDRMASRILGMGDVL+LIEQAEQVFDA+QAE AAKIG+GELTLEDFLEQMLA
Sbjct 301 EDFDVFHPDRMASRILGMGDVLTLIEQAEQVFDAEQAEATAAKIGSGELTLEDFLEQMLA 360
Query 346 VRKMGPIGNLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLR 405
+RKMGPIGNLLGMLPGA QMKDALA VDD QLDRVQAIIRGMTPQERADPKIINASRRLR
Sbjct 361 IRKMGPIGNLLGMLPGAGQMKDALAAVDDSQLDRVQAIIRGMTPQERADPKIINASRRLR 420
Query 406 IANGSGVTVSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKK 465
IANGSGVTV+EVNQLV+RFFEARKMMS M G MG+P GRK+ + +KG ++GK KK
Sbjct 421 IANGSGVTVAEVNQLVDRFFEARKMMSQMAGQMGMP-FGRKNTRKAAKGKNKQAGK--KK 477
Query 466 GTRGPTPPKVKSPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFP 522
G RGPTPPK ++P G GMPG+AGLP G PDLS MPKGLDELPPGLAD DLSKLKFP
Sbjct 478 GGRGPTPPKNRNPLGA-GMPGMAGLPPGFPDLSNMPKGLDELPPGLADIDLSKLKFP 533
>gi|296171453|ref|ZP_06852739.1| signal recognition particle protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894139|gb|EFG73899.1| signal recognition particle protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=522
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/524 (90%), Positives = 493/524 (95%), Gaps = 7/524 (1%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT ALQGLRGKGRLTDADI+ATTREIRLALLEADVSLPVVRAF+ RIK+RA+
Sbjct 1 MFESLSDRLTGALQGLRGKGRLTDADIEATTREIRLALLEADVSLPVVRAFVTRIKDRAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVNEELI ILGGETR+LAFAKTPPTVVMLAGLQGSGKT+LAGKL
Sbjct 61 GAEVSGALNPAQQVVKIVNEELIGILGGETRQLAFAKTPPTVVMLAGLQGSGKTSLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
AA LRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPG SPESGPGDPVAVAAA
Sbjct 121 AAWLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGESPESGPGDPVAVAAA 180
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
GLAEARAKH DVVIVDTAGRLGID+ELMAQAAAIRDA++PDEVLFVLDAMIGQDAVTTA
Sbjct 181 GLAEARAKHHDVVIVDTAGRLGIDDELMAQAAAIRDAVDPDEVLFVLDAMIGQDAVTTAE 240
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF EGVGFTGV LTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI
Sbjct 241 AFREGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVLSLIEQAEQVFDA+QAE AAAKIG GELTLEDFLEQMLA+R+MGPIGNLLGMLP
Sbjct 301 LGMGDVLSLIEQAEQVFDAEQAEAAAAKIGTGELTLEDFLEQMLAIRRMGPIGNLLGMLP 360
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMKDALA+VDD+QLDR+QAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL
Sbjct 361 GAGQMKDALAQVDDRQLDRLQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
V+RFFEARKMMSSMLGGMGIPG+GRKSATRK+KGAKGK GKK + GPTPPK ++P
Sbjct 421 VDRFFEARKMMSSMLGGMGIPGMGRKSATRKAKGAKGKKGKKGGR---GPTPPKARNPL- 476
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
M G+ G+P G PDLS MP+GL+ELPPGLADFDLSKLKFPG
Sbjct 477 ---MQGMPGMPAGFPDLSHMPEGLNELPPGLADFDLSKLKFPGN 517
>gi|120403173|ref|YP_953002.1| signal recognition particle protein [Mycobacterium vanbaalenii
PYR-1]
gi|119955991|gb|ABM12996.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mycobacterium
vanbaalenii PYR-1]
Length=522
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/528 (85%), Positives = 473/528 (90%), Gaps = 14/528 (2%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL GLRGKGRLTDADIDAT REIRLALLEADVSLPVVRAFI RIKERA+
Sbjct 1 MFESLSDRLTGALSGLRGKGRLTDADIDATAREIRLALLEADVSLPVVRAFISRIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS+ALNPAQQVVKIVNEELI ILGGETR+LAFA+ PPTV+MLAGLQGSGKTTLAGKL
Sbjct 61 GAEVSAALNPAQQVVKIVNEELIGILGGETRQLAFARNPPTVIMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESG------PGDP 174
A L+GQGHTPLLVACDLQRP AVNQLQ+VGERAGV VFAPHPG SP+ GDP
Sbjct 121 AKWLKGQGHTPLLVACDLQRPGAVNQLQIVGERAGVSVFAPHPGVSPDGATIEQMTSGDP 180
Query 175 VAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQD 234
V+VAAAGLAEAR+KH+DVVIVDTAGRLGID ELMAQAAAIRDA+NPDEVLFVLDAMIGQD
Sbjct 181 VSVAAAGLAEARSKHYDVVIVDTAGRLGIDAELMAQAAAIRDAVNPDEVLFVLDAMIGQD 240
Query 235 AVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPD 294
AVTTA AF EGVGFTGV LTKLDGDARGGAALSVREVTGVPILFAS GEKLEDFDVFHPD
Sbjct 241 AVTTADAFREGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFASAGEKLEDFDVFHPD 300
Query 295 RMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGN 354
RMASRILGMGDVL+LIEQAEQ FDA QAE AAKIG+GELTLEDFLEQMLA+RKMGPIGN
Sbjct 301 RMASRILGMGDVLTLIEQAEQHFDAAQAEATAAKIGSGELTLEDFLEQMLAIRKMGPIGN 360
Query 355 LLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTV 414
LLGMLPGA QMKDALA VDDKQLDRVQAIIRGMTPQER DPKIINASRRLRIANGSGVTV
Sbjct 361 LLGMLPGAGQMKDALAAVDDKQLDRVQAIIRGMTPQEREDPKIINASRRLRIANGSGVTV 420
Query 415 SEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPK 474
SEVNQLV+RFFEARKMMS M G MG+P GRK+ TRK+ AKGK+ + KKG +GPTPPK
Sbjct 421 SEVNQLVDRFFEARKMMSQMAGQMGMP-FGRKN-TRKA--AKGKNKQAGKKGRKGPTPPK 476
Query 475 VKSPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFP 522
++P G GMP G+P G PDLS MPKGLDELPPGLAD DLSKLKFP
Sbjct 477 NRNPLGA-GMP---GMPAGFPDLSNMPKGLDELPPGLADIDLSKLKFP 520
>gi|108798927|ref|YP_639124.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mycobacterium
sp. MCS]
gi|119868042|ref|YP_937994.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mycobacterium
sp. KMS]
gi|126434527|ref|YP_001070218.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mycobacterium
sp. JLS]
gi|108769346|gb|ABG08068.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mycobacterium
sp. MCS]
gi|119694131|gb|ABL91204.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mycobacterium
sp. KMS]
gi|126234327|gb|ABN97727.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mycobacterium
sp. JLS]
Length=520
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/526 (85%), Positives = 469/526 (90%), Gaps = 12/526 (2%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT ALQGLR KGRLTDADIDAT REIRLALLEADVSLPVVRAF+ RIKERA+
Sbjct 1 MFESLSDRLTGALQGLRNKGRLTDADIDATAREIRLALLEADVSLPVVRAFVARIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS+ALNPAQQVVKIVNEELI ILGGETR L FAKTPPTV+MLAGLQGSGKTTLAGKL
Sbjct 61 GAEVSAALNPAQQVVKIVNEELIGILGGETRPLVFAKTPPTVIMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPES----GPGDPVA 176
A LRGQGHTPLLVACDLQRP AVNQLQ+VGERAGV VFAPHPG +P + G DPVA
Sbjct 121 AKWLRGQGHTPLLVACDLQRPGAVNQLQIVGERAGVSVFAPHPGTAPGAPEVKGTADPVA 180
Query 177 VAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAV 236
VAAAGLAEA+AKHFDVV+VDTAGRLGIDEELM QAAAIRDA++PDEVLFVLDAMIGQDAV
Sbjct 181 VAAAGLAEAKAKHFDVVVVDTAGRLGIDEELMNQAAAIRDAVDPDEVLFVLDAMIGQDAV 240
Query 237 TTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRM 296
TTA AF EGVGFTGV LTKLDGDARGGAALSVREVTGVPILFAS+GEKLEDFDVFHPDRM
Sbjct 241 TTAEAFREGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFASSGEKLEDFDVFHPDRM 300
Query 297 ASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLL 356
ASRILGMGDVLSLIE AEQ FDA+QAE AAKIG+GELTLEDFLEQMLA+RKMGPIGNLL
Sbjct 301 ASRILGMGDVLSLIEAAEQHFDAEQAEATAAKIGSGELTLEDFLEQMLAIRKMGPIGNLL 360
Query 357 GMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSE 416
GMLPGA QMKDALA VDD QLDRVQAIIRGMTP ERADPKIINASRRLRIANGSGV+VSE
Sbjct 361 GMLPGAGQMKDALAAVDDSQLDRVQAIIRGMTPAERADPKIINASRRLRIANGSGVSVSE 420
Query 417 VNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVK 476
VNQLV+RFFEARKMMS M G MG+P GR TRK+ KGK GKK+ + GPTPPK +
Sbjct 421 VNQLVDRFFEARKMMSQMAGQMGMP-FGRGKNTRKNAKGKGKKGKKAGR---GPTPPKNR 476
Query 477 SPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFP 522
+P G GMP G+P G PDLS MPKGLDELPPGLADFDLSKLKFP
Sbjct 477 NPLGA-GMP---GMPAGFPDLSNMPKGLDELPPGLADFDLSKLKFP 518
>gi|118468367|ref|YP_886770.1| signal recognition particle protein [Mycobacterium smegmatis
str. MC2 155]
gi|118169654|gb|ABK70550.1| signal recognition particle protein [Mycobacterium smegmatis
str. MC2 155]
Length=522
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/530 (84%), Positives = 470/530 (89%), Gaps = 14/530 (2%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT ALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAF+ RIKERA+
Sbjct 1 MFESLSDRLTGALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFVARIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS+ALNPAQQVVKIVNEELI ILGGETR+LAFAKTPPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSAALNPAQQVVKIVNEELIGILGGETRQLAFAKTPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPES------GPGDP 174
A L+ +GH+PLLVACDLQRP AVNQLQ+VGERAGV VFAPHPG +P + GPGDP
Sbjct 121 AKWLKDKGHSPLLVACDLQRPGAVNQLQIVGERAGVAVFAPHPGTAPGAHETEGAGPGDP 180
Query 175 VAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQD 234
VAVAAAGLAEA+ K + VVIVDTAGRLGID+ LMAQAA IRDA+ PDE LFVLDAMIGQD
Sbjct 181 VAVAAAGLAEAKTKLYGVVIVDTAGRLGIDDVLMAQAAGIRDAVQPDETLFVLDAMIGQD 240
Query 235 AVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPD 294
AV TA AF EGVGFTGV LTKLDGDARGGAALSVREVTGVPILFAS GEKLEDFDVFHPD
Sbjct 241 AVATAEAFREGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFASAGEKLEDFDVFHPD 300
Query 295 RMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGN 354
RMASRILGMGDVL+LIEQAEQVFDAQ+AEEAAAKIG GELTLEDFLEQML +RKMGPIGN
Sbjct 301 RMASRILGMGDVLTLIEQAEQVFDAQKAEEAAAKIGTGELTLEDFLEQMLTIRKMGPIGN 360
Query 355 LLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTV 414
LLGMLPGA QMKDALA VDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTV
Sbjct 361 LLGMLPGAGQMKDALAAVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTV 420
Query 415 SEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPK 474
SEVNQLV+RFFEARKMMSSM G MG+ G GRKSATRK+ K+ K +GPT PK
Sbjct 421 SEVNQLVDRFFEARKMMSSMAGQMGM-GFGRKSATRKAA-KSKGKKGKNAKKGKGPTQPK 478
Query 475 VKSPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
V++P G AGLPGG PDLS MPKGLDELPPGLADFDLSKLKFP K
Sbjct 479 VRNPLGA------AGLPGGFPDLSNMPKGLDELPPGLADFDLSKLKFPNK 522
>gi|169630318|ref|YP_001703967.1| Signal recognition particle protein Ffh [Mycobacterium abscessus
ATCC 19977]
gi|169242285|emb|CAM63313.1| Signal recognition particle protein Ffh [Mycobacterium abscessus]
Length=523
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/528 (82%), Positives = 459/528 (87%), Gaps = 13/528 (2%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL GLRGKGRL+DADIDAT R IRLALLEADV+LPVVR FI RIKERA+
Sbjct 1 MFESLSDRLTDALAGLRGKGRLSDADIDATCRTIRLALLEADVALPVVRTFITRIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVNEELI ILGGETR+LAFAKTPPTVVMLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSGALNPAQQVVKIVNEELIGILGGETRQLAFAKTPPTVVMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASP---ESGP--GDPV 175
A L+GQGHTPLLVACDLQRP AVNQLQVVGERAGV V+APHPG + E G GDPV
Sbjct 121 AKWLKGQGHTPLLVACDLQRPGAVNQLQVVGERAGVSVYAPHPGTADGGLEVGSLVGDPV 180
Query 176 AVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDA 235
AVA GLA A+A+HFDVV+VDTAGRLGID ELM QAA IRDA++PDEVLFVLDAMIGQDA
Sbjct 181 AVARDGLAHAKAQHFDVVLVDTAGRLGIDAELMDQAARIRDAVDPDEVLFVLDAMIGQDA 240
Query 236 VTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDR 295
V+TA AF EGVGFTGV LTKLDGDARGGAALSVRE+TG PILFASTGEKLEDFDVFHPDR
Sbjct 241 VSTAEAFREGVGFTGVVLTKLDGDARGGAALSVREITGTPILFASTGEKLEDFDVFHPDR 300
Query 296 MASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNL 355
MASRILGMGD+LSLIEQAEQ FDA+Q+ AA KI +GELTLEDFLEQMLA+RKMGPIGNL
Sbjct 301 MASRILGMGDLLSLIEQAEQHFDAEQSLAAAEKITSGELTLEDFLEQMLAIRKMGPIGNL 360
Query 356 LGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVS 415
LGMLPGA QMKDALA VDDKQLDRVQAIIRGMTP ERADPKIINASRRLRIANGSGV VS
Sbjct 361 LGMLPGAGQMKDALAAVDDKQLDRVQAIIRGMTPAERADPKIINASRRLRIANGSGVAVS 420
Query 416 EVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKV 475
EVNQLV+RFFEARKMMSSM G MG+ I RKS GK+ KK KKG+RGPT PK+
Sbjct 421 EVNQLVDRFFEARKMMSSMAGRMGMGAI-----NRKSNRKGGKNNKKGKKGSRGPTAPKL 475
Query 476 KSPFGVPGMPGL-AGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFP 522
K G PGM GL G+P G PDLS MP+GL ELPPGLAD D+SKLKFP
Sbjct 476 KG--GFPGMAGLPGGMPAGFPDLSGMPEGLGELPPGLADIDISKLKFP 521
>gi|54026131|ref|YP_120373.1| putative signal recognition particle protein [Nocardia farcinica
IFM 10152]
gi|54017639|dbj|BAD59009.1| putative signal recognition particle protein [Nocardia farcinica
IFM 10152]
Length=520
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/532 (79%), Positives = 453/532 (86%), Gaps = 20/532 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL+ LRGKGRL+ ADIDAT REIRLALLEADV+LPVVR FI RIKERA+
Sbjct 1 MFESLSDRLTGALKDLRGKGRLSPADIDATCREIRLALLEADVALPVVRGFIARIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS+ALNPAQQVVKIVNEEL+ ILGGETR L AKTPPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSAALNPAQQVVKIVNEELVGILGGETRRLNLAKTPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPG-------D 173
A L+GQGH PLLVACDLQRP AV QLQVVGERAGVPVFAPHPG S G D
Sbjct 121 AKYLKGQGHQPLLVACDLQRPGAVTQLQVVGERAGVPVFAPHPGTSVGGGENPLGITAAD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PV VA G+AEAR K +D+VIVDTAGRLGIDEELM QAA+IRDA+ PDE LFVLDAMIGQ
Sbjct 181 PVEVARGGVAEARNKQYDIVIVDTAGRLGIDEELMRQAASIRDAVQPDETLFVLDAMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAVTTA AF +GVGFTGV LTKLDGDARGGAALSVR VTG PI+FASTGEKLEDFDVFHP
Sbjct 241 DAVTTAEAFRDGVGFTGVVLTKLDGDARGGAALSVRNVTGAPIMFASTGEKLEDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
DRMASRILGMGDVL+LIEQAEQV+DAQQAEEAA KIG+GELTLEDFLEQMLA+RKMGPIG
Sbjct 301 DRMASRILGMGDVLTLIEQAEQVYDAQQAEEAARKIGSGELTLEDFLEQMLAIRKMGPIG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
NLLGMLPGA QMKD LA+VDDKQLDRVQAIIRGMTP ERA+PKIINASRRLRIANGSGVT
Sbjct 361 NLLGMLPGAGQMKDVLAQVDDKQLDRVQAIIRGMTPAERANPKIINASRRLRIANGSGVT 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPP 473
VSEVNQLV+RFFEA+KMM+ M MG+PG R + K KKG RGPTPP
Sbjct 421 VSEVNQLVDRFFEAKKMMAMMGRQMGMPGSRRNAKKGKK----------GKKGGRGPTPP 470
Query 474 KVKSPFGVPGMP-GLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
KV+ G PGMP G+ G+P G+PD+S MP GL+ELPPGL +FDLSKLKFP K
Sbjct 471 KVRG--GFPGMPAGMPGMPAGMPDISNMPAGLNELPPGLENFDLSKLKFPKK 520
>gi|333991275|ref|YP_004523889.1| signal recognition particle protein Ffh [Mycobacterium sp. JDM601]
gi|333487243|gb|AEF36635.1| signal recognition particle protein Ffh [Mycobacterium sp. JDM601]
Length=525
Score = 769 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/530 (86%), Positives = 480/530 (91%), Gaps = 10/530 (1%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT ALQGLR KGRLTDADIDAT REIRLALLEADVSLPVVR FI RIK+RA+
Sbjct 1 MFESLSDRLTGALQGLRSKGRLTDADIDATAREIRLALLEADVSLPVVREFIGRIKDRAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVNEELI ILGG+TR L FAKTPPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSGALNPAQQVVKIVNEELIGILGGQTRTLTFAKTPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPES-----GPGDPV 175
A LRGQGHTPLLVACDLQRP AVNQLQVVGERAGV VFAPHPG S + GPGDPV
Sbjct 121 ATWLRGQGHTPLLVACDLQRPGAVNQLQVVGERAGVAVFAPHPGTSAHAHEAQIGPGDPV 180
Query 176 AVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDA 235
+VAAAGLAEA+AKHFDVV+VDTAGRLGIDEE+MAQAAAIRDA+ PDEVLFVLDAMIGQDA
Sbjct 181 SVAAAGLAEAKAKHFDVVVVDTAGRLGIDEEMMAQAAAIRDAVQPDEVLFVLDAMIGQDA 240
Query 236 VTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDR 295
VTTA AF EGVGFTGV LTKLDGDARGGAALSVREVTG PILFASTGEKLEDFDVFHPDR
Sbjct 241 VTTADAFREGVGFTGVVLTKLDGDARGGAALSVREVTGAPILFASTGEKLEDFDVFHPDR 300
Query 296 MASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNL 355
MASRILGMGDVLSLIEQAEQVFDAQ+AEEAAAKIG GELTLEDFLEQMLA+RKMGPIGNL
Sbjct 301 MASRILGMGDVLSLIEQAEQVFDAQKAEEAAAKIGTGELTLEDFLEQMLAIRKMGPIGNL 360
Query 356 LGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVS 415
LGMLPGA QMKDALA VDD QLDR+QAIIRGMTP ERADPKIINASRRLRIANGSGV+VS
Sbjct 361 LGMLPGAGQMKDALAAVDDSQLDRLQAIIRGMTPAERADPKIINASRRLRIANGSGVSVS 420
Query 416 EVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKV 475
EVNQLV+RFFEARKMMSSM+GGMG+PG+GRKSATRK+KG K K+GKK K+ RGPTPPK
Sbjct 421 EVNQLVDRFFEARKMMSSMMGGMGLPGLGRKSATRKAKGGKNKAGKKGKR--RGPTPPKA 478
Query 476 KSPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
+ G G G+P G PDLSQ+P+GL+ELPPGLADFDLSKL FPG+K
Sbjct 479 PG---LFGPGGPGGMPAGFPDLSQLPEGLNELPPGLADFDLSKLNFPGQK 525
>gi|262202018|ref|YP_003273226.1| signal recognition particle protein [Gordonia bronchialis DSM
43247]
gi|262085365|gb|ACY21333.1| signal recognition particle protein [Gordonia bronchialis DSM
43247]
Length=517
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/531 (76%), Positives = 447/531 (85%), Gaps = 20/531 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+F+SLSDRLT AL+ LRGKGRL+DADID T REIRLALLEADVSLPVVRAFI RIK+RA+
Sbjct 1 MFDSLSDRLTGALKDLRGKGRLSDADIDRTCREIRLALLEADVSLPVVRAFIARIKDRAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS+ALNPAQQVVKIVNEEL+ ILGGETR + +AKTPPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSAALNPAQQVVKIVNEELVGILGGETRRVTYAKTPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPES------GPGDP 174
L+ QGHTP+LVACDLQRP AV+QLQ+VGERAGVPVFAPHPG S GDP
Sbjct 121 GHWLQQQGHTPMLVACDLQRPGAVSQLQIVGERAGVPVFAPHPGTSVGGEGVLGVSSGDP 180
Query 175 VAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQD 234
VAVA G+ EAR +H+DVVI+DTAGRLGIDEELM QAA IR+A PDEVLFV+DAMIGQD
Sbjct 181 VAVAQGGVDEARRQHYDVVIIDTAGRLGIDEELMRQAADIREATRPDEVLFVVDAMIGQD 240
Query 235 AVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPD 294
AVTTA AF +GVGFTGV LTKLDGDARGGAALSVREVTG PI+FAS+GEKLEDFDVFHPD
Sbjct 241 AVTTAQAFQDGVGFTGVVLTKLDGDARGGAALSVREVTGRPIMFASSGEKLEDFDVFHPD 300
Query 295 RMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGN 354
RMASRILGMGDVLSLIEQAEQ +D QQAE AAAKI G+LTLEDFLEQML +RKMGPIGN
Sbjct 301 RMASRILGMGDVLSLIEQAEQHWDTQQAEAAAAKITQGDLTLEDFLEQMLMIRKMGPIGN 360
Query 355 LLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTV 414
+LGMLPGA QMKDAL++VDDKQLDRVQAIIRGMTP ER +PKIINASRRLRIANGSGVTV
Sbjct 361 ILGMLPGAGQMKDALSQVDDKQLDRVQAIIRGMTPAERDNPKIINASRRLRIANGSGVTV 420
Query 415 SEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPK 474
SEVNQLV+RFFEARKMM+ M G MG+ +GRKS +K KG KGK+ + PTPPK
Sbjct 421 SEVNQLVDRFFEARKMMAQMSGRMGMGAVGRKSNRKKGKGKKGKAKGRG------PTPPK 474
Query 475 VKSPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
++ GL G+P G PDLS MP GLD+LPPGL D+S+ + P KK
Sbjct 475 MRG--------GLPGMPAGFPDLSNMPPGLDQLPPGLEGIDISQFQQPKKK 517
>gi|226365994|ref|YP_002783777.1| signal recognition particle protein [Rhodococcus opacus B4]
gi|226244484|dbj|BAH54832.1| signal recognition particle protein [Rhodococcus opacus B4]
Length=535
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/536 (78%), Positives = 448/536 (84%), Gaps = 20/536 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
VFESLSDRLT AL+ LRGKGRL+ ADIDAT REIRLALLEADV+LPVVR+FI +IKERA+
Sbjct 8 VFESLSDRLTGALKDLRGKGRLSGADIDATCREIRLALLEADVALPVVRSFIAKIKERAK 67
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
G EVS+ALNPAQQVVKIVNEEL+ ILGGETR LAFAKTPPTV+MLAGLQGSGKTTLAGKL
Sbjct 68 GVEVSAALNPAQQVVKIVNEELVGILGGETRRLAFAKTPPTVIMLAGLQGSGKTTLAGKL 127
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPG-------D 173
A LR QGHTPLLVACDLQRP AV QLQ+VGERAG VFAPHPG S G D
Sbjct 128 AKWLRDQGHTPLLVACDLQRPGAVTQLQIVGERAGATVFAPHPGTSIGGGDNELGITAAD 187
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PV VA AG+ EAR K FDVVIVDTAGRLGID +LMAQAA IRDA+NPDE +FVLDAMIGQ
Sbjct 188 PVEVARAGVEEARNKQFDVVIVDTAGRLGIDADLMAQAAGIRDAVNPDETIFVLDAMIGQ 247
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAV+TA AF EGVGFTGV LTKLDGDARGGAALSVREVTG PILFASTGEKLEDFDVFHP
Sbjct 248 DAVSTAEAFREGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASTGEKLEDFDVFHP 307
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
DRMASRILGMGDVLSLIEQAEQVFD +QAE A KIG+G+LTLEDFLEQM+AVRKMGPIG
Sbjct 308 DRMASRILGMGDVLSLIEQAEQVFDQKQAEATAQKIGSGQLTLEDFLEQMMAVRKMGPIG 367
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
NLLGMLPGA QMKDALA VD+KQLDRVQAIIRGMTP ER DPKIINASRRLRIANGSGV
Sbjct 368 NLLGMLPGAGQMKDALANVDEKQLDRVQAIIRGMTPAERDDPKIINASRRLRIANGSGVK 427
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPP 473
VS+VNQLV+RFFEARKMM++M G MG+PG RK + + K GKK KKG +GPTPP
Sbjct 428 VSDVNQLVDRFFEARKMMAAMAGRMGMPG------ARKPQ--RSKKGKKGKKGGKGPTPP 479
Query 474 KVK-----SPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
KV+ G GLP G+PDLS MPKGLDELPPGL DLS+LK P K
Sbjct 480 KVRGGFPGGLPGGFPGMPPGGLPAGMPDLSNMPKGLDELPPGLEGIDLSQLKLPKK 535
>gi|333919230|ref|YP_004492811.1| putative signal recognition particle protein [Amycolicicoccus
subflavus DQS3-9A1]
gi|333481451|gb|AEF40011.1| Putative signal recognition particle protein [Amycolicicoccus
subflavus DQS3-9A1]
Length=519
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/534 (76%), Positives = 445/534 (84%), Gaps = 25/534 (4%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+F+SLSDRL AL+GLRGKGRLTDADIDAT REIRLALLEADV+LPVVR FI +IK RA+
Sbjct 1 MFDSLSDRLNGALKGLRGKGRLTDADIDATCREIRLALLEADVALPVVREFIKQIKVRAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEV ALNPAQQV+KIVNEEL+ ILGGETR L+ AK PPTV+MLAGLQGSGKTTLAGKL
Sbjct 61 GAEVHGALNPAQQVIKIVNEELVGILGGETRRLSLAKNPPTVIMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPG-------D 173
A L+ QGH P+LVACDLQRP AV QLQ+VGE+AGV VFAPHPG S G D
Sbjct 121 AKYLKAQGHAPMLVACDLQRPGAVTQLQIVGEKAGVNVFAPHPGTSIGGGANPLGITASD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PV VA G+AEAR K +DVVIVDTAGRLGIDEELM QAA IRDA+ PDE LFVLDAM+GQ
Sbjct 181 PVNVARDGVAEARTKQYDVVIVDTAGRLGIDEELMEQAANIRDAVQPDETLFVLDAMVGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAV+TA AF EGVGFTGV LTKLDGDARGGAALSVREVTG PI+FASTGEKLEDFDVFHP
Sbjct 241 DAVSTANAFAEGVGFTGVVLTKLDGDARGGAALSVREVTGRPIMFASTGEKLEDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
DRMASRILGMGD+LSLIEQAEQVFDAQ+AE A KIG+GELTLEDFL+Q++A+RKMGPI
Sbjct 301 DRMASRILGMGDLLSLIEQAEQVFDAQEAEATAQKIGSGELTLEDFLDQLMAIRKMGPIA 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
NL+GMLPGA QMKDAL +VD+KQLDR+QAIIRGMTP ERA+PKIINASRRLRIANGSGV
Sbjct 361 NLMGMLPGAGQMKDALDQVDEKQLDRIQAIIRGMTPAERANPKIINASRRLRIANGSGVK 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPP 473
VS+VNQLV+RFFEARKMMS+M G MG+PG S+ + K GKK K RGPTPP
Sbjct 421 VSDVNQLVDRFFEARKMMSAMAGRMGLPG---------SQRRRTKKGKKGKGRGRGPTPP 471
Query 474 KVKSPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFP--GKK 525
KV+ GMPG GLP G+P+LS MPKGLDELPPGL DLS+L P GKK
Sbjct 472 KVRG-----GMPG--GLPAGMPNLSGMPKGLDELPPGLEGLDLSQLNLPNQGKK 518
>gi|111023492|ref|YP_706464.1| signal recognition particle protein [Rhodococcus jostii RHA1]
gi|110823022|gb|ABG98306.1| signal recognition particle protein [Rhodococcus jostii RHA1]
Length=528
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/536 (78%), Positives = 448/536 (84%), Gaps = 20/536 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL+ LRGKGRL+ ADIDAT REIRLALLEADV+LPVVR+FI +IKERA+
Sbjct 1 MFESLSDRLTGALKDLRGKGRLSGADIDATCREIRLALLEADVALPVVRSFIAKIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
G EVS+ALNPAQQVVKIVNEEL+ ILGGETR LAFAKTPPTV+MLAGLQGSGKTTLAGKL
Sbjct 61 GVEVSAALNPAQQVVKIVNEELVEILGGETRRLAFAKTPPTVIMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPG-------D 173
A LR QGHTPLLVACDLQRP AV QLQ+VGERAG VFAPHPG S G D
Sbjct 121 AKWLRDQGHTPLLVACDLQRPGAVTQLQIVGERAGATVFAPHPGTSIGGGDNELGVTAAD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PV VA AG+ EAR K FDVVIVDTAGRLGID +LMAQAA IRDA+NPDE +FVLDAMIGQ
Sbjct 181 PVEVARAGVEEARNKQFDVVIVDTAGRLGIDADLMAQAAGIRDAVNPDETIFVLDAMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAV+TA AF EGVGFTGV LTKLDGDARGGAALSVREVTG PILFASTGEKLEDFDVFHP
Sbjct 241 DAVSTAEAFREGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASTGEKLEDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
DRMASRILGMGDVLSLIE AEQ FDA+QAE A KIG+G+LTLEDFLEQM+AVRKMGPIG
Sbjct 301 DRMASRILGMGDVLSLIEAAEQHFDAEQAEATAQKIGSGQLTLEDFLEQMMAVRKMGPIG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
NLLGMLPGA QMKDALA VD+KQLDRVQAIIRGMTP ER DPKIINASRRLRIANGSGV
Sbjct 361 NLLGMLPGAGQMKDALANVDEKQLDRVQAIIRGMTPAERDDPKIINASRRLRIANGSGVK 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPP 473
VS+VNQLV+RFFEARKMM++M G MG+PG +RK + + K GKK KKG +GPTPP
Sbjct 421 VSDVNQLVDRFFEARKMMAAMAGRMGMPG------SRKPQ--RSKKGKKGKKGGKGPTPP 472
Query 474 KVK-----SPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
KV+ G GLP G+PDLS MPKGLDELPPGL DLS+LK P K
Sbjct 473 KVRGGFPGGLPGGFPGMPPGGLPAGMPDLSNMPKGLDELPPGLEGIDLSQLKLPKK 528
>gi|312140440|ref|YP_004007776.1| signal recognition particle protein [Rhodococcus equi 103S]
gi|311889779|emb|CBH49096.1| signal recognition particle protein [Rhodococcus equi 103S]
Length=526
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/534 (77%), Positives = 445/534 (84%), Gaps = 18/534 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL+ LRGKGRL+ ADIDAT REIRLALLEADV+LPVVR FI +IKERA+
Sbjct 1 MFESLSDRLTGALKDLRGKGRLSGADIDATCREIRLALLEADVALPVVRTFIAKIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS+ALNPAQQVVKIVNEEL+ ILGGETR L FAKTPPTV+MLAGLQGSGKTTLAGKL
Sbjct 61 GAEVSAALNPAQQVVKIVNEELVGILGGETRRLQFAKTPPTVIMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPG-------D 173
A L+ QGHTPLLVACDLQRP AV+QLQ+VGERAG VFAPHPG S G D
Sbjct 121 AKWLKDQGHTPLLVACDLQRPGAVSQLQIVGERAGAAVFAPHPGTSIGGGENPLGISAAD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PV VA AG+ EAR K +DVVIVDTAGRLGIDEELMAQAA IRDA+ PDE +FVLDAMIGQ
Sbjct 181 PVEVARAGVEEARNKQYDVVIVDTAGRLGIDEELMAQAAGIRDAVQPDETIFVLDAMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAV TA AF GVGFTGV LTKLDGDARGGAALSVREVTG PILFASTGEKLEDFDVFHP
Sbjct 241 DAVHTAEAFKSGVGFTGVVLTKLDGDARGGAALSVREVTGEPILFASTGEKLEDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
DRMASRILGMGDVL+LIEQAEQVFDAQQAE AAKIG+GELTLEDFLEQM+AVR+MGPIG
Sbjct 301 DRMASRILGMGDVLTLIEQAEQVFDAQQAEATAAKIGSGELTLEDFLEQMMAVRRMGPIG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
NLLGMLPGA QMKDALA VD+KQLDR+QAIIRGMTP ER +PKIINASRRLRIANGSGV
Sbjct 361 NLLGMLPGAGQMKDALANVDEKQLDRIQAIIRGMTPAERENPKIINASRRLRIANGSGVK 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPP 473
VS+VNQLV+RFFEARKMM++M G MG+PG K +GK GKK KKG +GPT P
Sbjct 421 VSDVNQLVDRFFEARKMMAAMAGRMGMPG--------ARKQVRGKKGKKGKKGGKGPTQP 472
Query 474 KVK---SPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
K+K G+P G PDLS+MPKGLD+LPPGL DLS+LK P K
Sbjct 473 KIKGGFPGMPGGLPGMPGGMPAGFPDLSKMPKGLDQLPPGLDGIDLSQLKLPKK 526
>gi|325675945|ref|ZP_08155628.1| signal recognition particle protein [Rhodococcus equi ATCC 33707]
gi|325553183|gb|EGD22862.1| signal recognition particle protein [Rhodococcus equi ATCC 33707]
Length=526
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/534 (77%), Positives = 444/534 (84%), Gaps = 18/534 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL+ LRGKGRL+ ADIDAT REIRLALLEADV+LPVVR FI +IKERA+
Sbjct 1 MFESLSDRLTGALKDLRGKGRLSGADIDATCREIRLALLEADVALPVVRTFIAKIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS+ALNPAQQVVKIVNEEL+ ILGGETR L FAKTPPTV+MLAGLQGSGKTTLAGKL
Sbjct 61 GAEVSAALNPAQQVVKIVNEELVGILGGETRRLQFAKTPPTVIMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPG-------D 173
A L+ QGHTPLLVACDLQRP AV+QLQ+VGERAG VFAPHPG S G D
Sbjct 121 AKWLKDQGHTPLLVACDLQRPGAVSQLQIVGERAGAAVFAPHPGTSIGGGENPLGISAAD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PV VA AG+ EAR K +DVVIVDTAGRLGIDEELMAQAA IRDA+ PDE +FVLDAMIGQ
Sbjct 181 PVEVARAGVEEARNKQYDVVIVDTAGRLGIDEELMAQAAGIRDAVQPDETIFVLDAMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAV TA AF GVGFTGV LTKLDGDARGGAALSVREVTG PILFASTGEKLEDFDVFHP
Sbjct 241 DAVHTAEAFKSGVGFTGVVLTKLDGDARGGAALSVREVTGEPILFASTGEKLEDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
DRMASRILGMGDVL+LIEQAEQVFDAQQAE AAKIG+GELTLEDFLEQM+AVR+MGPIG
Sbjct 301 DRMASRILGMGDVLTLIEQAEQVFDAQQAEATAAKIGSGELTLEDFLEQMMAVRRMGPIG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
NLLGMLPGA QMKDALA VD+KQLDR+QAIIRGMTP ER +PKIINASRRLRIANGSGV
Sbjct 361 NLLGMLPGAGQMKDALANVDEKQLDRIQAIIRGMTPAERENPKIINASRRLRIANGSGVK 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPP 473
VS+VNQLV+RFFEARKMM++M G MG+PG K +GK GKK KKG +GPT P
Sbjct 421 VSDVNQLVDRFFEARKMMAAMAGRMGMPG--------ARKQVRGKKGKKGKKGGKGPTQP 472
Query 474 KVK---SPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
K+K G+P G PDLS+MPKGLD+LPPGL DL +LK P K
Sbjct 473 KIKGGFPGMPGGLPGMPGGMPAGFPDLSKMPKGLDQLPPGLDGIDLGQLKLPKK 526
>gi|226305929|ref|YP_002765889.1| signal recognition particle protein [Rhodococcus erythropolis
PR4]
gi|229491376|ref|ZP_04385200.1| signal recognition particle protein [Rhodococcus erythropolis
SK121]
gi|226185046|dbj|BAH33150.1| signal recognition particle protein [Rhodococcus erythropolis
PR4]
gi|229321661|gb|EEN87458.1| signal recognition particle protein [Rhodococcus erythropolis
SK121]
Length=525
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/533 (77%), Positives = 444/533 (84%), Gaps = 17/533 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT +L+ LRGKGRL+ ADIDAT REIRLALLEADV+LPVVR+FI +IKERA+
Sbjct 1 MFESLSDRLTGSLKDLRGKGRLSGADIDATAREIRLALLEADVALPVVRSFIAKIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVNEEL+ +LGGETR L FAKTPPTV+MLAGLQGSGKTTLAGKL
Sbjct 61 GAEVSGALNPAQQVVKIVNEELVEVLGGETRRLQFAKTPPTVIMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPG-------D 173
A L+ QGHTPLLVACDLQRP AV QLQ+VGERAG VFAPHPG S G D
Sbjct 121 AKWLKDQGHTPLLVACDLQRPGAVTQLQIVGERAGAAVFAPHPGTSIGGGENALGVSAAD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PV VA AG+ EAR KH+DVVIVDTAGRLGID ELMAQAA IRDA+NPDE +FVLDAMIGQ
Sbjct 181 PVEVARAGVEEARNKHYDVVIVDTAGRLGIDSELMAQAAGIRDAVNPDETIFVLDAMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAV+TA AF EGVG TGV LTKLDGDARGGAALSVREVTG PILFASTGEKLEDFDVFHP
Sbjct 241 DAVSTADAFREGVGITGVVLTKLDGDARGGAALSVREVTGQPILFASTGEKLEDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
DRMASRILGMGDVLSLIEQAEQVFDA QAE AAKIG+G+LTLEDFL+QM+AVRKMGPIG
Sbjct 301 DRMASRILGMGDVLSLIEQAEQVFDADQAEATAAKIGSGQLTLEDFLDQMMAVRKMGPIG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
NLLGMLPGA MKDALA VD+KQLDR+QAIIRGMTP ER DPKIINASRRLRIANGSGV
Sbjct 361 NLLGMLPGAGGMKDALANVDEKQLDRIQAIIRGMTPAERDDPKIINASRRLRIANGSGVK 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPP 473
VS+VNQLV+RFFEARKMM++M G MG+PG K + K GKK KKG +GPT P
Sbjct 421 VSDVNQLVDRFFEARKMMAAMAGRMGMPG--------ARKQVRSKKGKKGKKGGKGPTQP 472
Query 474 KVK--SPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
K++ P G+P G+PDLS MPKGLD+LPPGL DLS+LK P K
Sbjct 473 KMRGGFPGMGGFPGMPGGMPAGMPDLSNMPKGLDQLPPGLEGIDLSQLKLPKK 525
>gi|296139328|ref|YP_003646571.1| signal recognition particle protein [Tsukamurella paurometabola
DSM 20162]
gi|296027462|gb|ADG78232.1| signal recognition particle protein [Tsukamurella paurometabola
DSM 20162]
Length=522
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/528 (76%), Positives = 440/528 (84%), Gaps = 21/528 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRL AL GLRGKGRLTDADIDAT REIRLALLEADV+LPVVRAF+ RIKERA+
Sbjct 1 MFESLSDRLGGALSGLRGKGRLTDADIDATAREIRLALLEADVALPVVRAFVSRIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS+ALNPAQQ+VKIVNEEL+ ILGGETR + AKTPPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSAALNPAQQIVKIVNEELVGILGGETRRINLAKTPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPG-------D 173
A L+ QGHTP+LVACDLQRP AV+QL++VGERAGVP +APHPG S G G D
Sbjct 121 AHHLKKQGHTPMLVACDLQRPGAVDQLKIVGERAGVPTYAPHPGTS-VGGEGTLGVSAAD 179
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PV VA G+ EA+AK DVVIVDTAGRLGIDEELM QA AIRDA++PDEVLFVLDAMIGQ
Sbjct 180 PVEVARGGIEEAKAKQHDVVIVDTAGRLGIDEELMGQARAIRDAVDPDEVLFVLDAMIGQ 239
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAVTTA AF EGV FTGV LTKLDGDARGGAALSVRE+TG PILFASTGEKL+DFDVFHP
Sbjct 240 DAVTTAQAFAEGVDFTGVVLTKLDGDARGGAALSVREITGKPILFASTGEKLDDFDVFHP 299
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
DRM+SRILGMGDVL+LIEQAEQV D Q+AEEAAAKI +GELTLEDFL+QML +RKMGPIG
Sbjct 300 DRMSSRILGMGDVLTLIEQAEQVMDQQKAEEAAAKITSGELTLEDFLDQMLMIRKMGPIG 359
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
NLLGMLPGA QMKDALA VDD QLDR+QAIIRGMTP ERADPKIINASRRLRIA GSGV
Sbjct 360 NLLGMLPGAGQMKDALAAVDDSQLDRIQAIIRGMTPAERADPKIINASRRLRIAKGSGVA 419
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPP 473
VS+VNQLV+RFFEARKMMS M G G P ++ K K K K RGPT P
Sbjct 420 VSDVNQLVDRFFEARKMMSQM-AGFGAP--------KRIPKRKQKGKKGKKGSGRGPTQP 470
Query 474 KVKSPFGVPGMP-GLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLK 520
K++ G PGMP G+ G+P G+ DLS MPKGLD+LPPGL D++ L+
Sbjct 471 KMRG--GFPGMPAGMPGMPAGM-DLSSMPKGLDQLPPGLEGIDMAALE 515
>gi|343925317|ref|ZP_08764842.1| signal recognition particle protein [Gordonia alkanivorans NBRC
16433]
gi|343764756|dbj|GAA11768.1| signal recognition particle protein [Gordonia alkanivorans NBRC
16433]
Length=519
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/531 (76%), Positives = 440/531 (83%), Gaps = 19/531 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+F+SLSDRLT AL+ LRGKGRL+DADID T REIRLALLEADVSLPVVRAFI RIKERA+
Sbjct 1 MFDSLSDRLTGALKDLRGKGRLSDADIDRTCREIRLALLEADVSLPVVRAFIARIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS+ALNPAQ VVKIVNEELI ILGGETR + FAK PPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSAALNPAQTVVKIVNEELIGILGGETRRVRFAKNPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGA------SPESGPGDP 174
L+ QGHTPLLVACDLQRP AV+QLQ+VGERAGVPVFAPHPG + GDP
Sbjct 121 GNWLKQQGHTPLLVACDLQRPGAVSQLQIVGERAGVPVFAPHPGTGVGGEGTLGVTSGDP 180
Query 175 VAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQD 234
V+VA AG+ EA+AKH+DVV++DTAGRLGID ELM QA+ IRDA PDEVLFV+DAMIGQD
Sbjct 181 VSVARAGVEEAKAKHYDVVVIDTAGRLGIDAELMKQASDIRDATTPDEVLFVVDAMIGQD 240
Query 235 AVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPD 294
AVTTA AF +GVGFTGV LTKLDGDARGGAALSVREVTG PI+FAS+GEKLEDFDVFHPD
Sbjct 241 AVTTAEAFADGVGFTGVVLTKLDGDARGGAALSVREVTGQPIMFASSGEKLEDFDVFHPD 300
Query 295 RMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGN 354
RMASRILGMGDVLSLIEQAEQ +DA+QAE AAAKI GELTLEDFLEQML +RKMGPIGN
Sbjct 301 RMASRILGMGDVLSLIEQAEQHWDAEQAEAAAAKITQGELTLEDFLEQMLMIRKMGPIGN 360
Query 355 LLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTV 414
+LGMLPGA QMKDAL++VDDKQLDRVQAIIRGMTP ER +PKIINASRRLRIANGSGVTV
Sbjct 361 ILGMLPGAGQMKDALSQVDDKQLDRVQAIIRGMTPAERDNPKIINASRRLRIANGSGVTV 420
Query 415 SEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPK 474
SEVNQLV+RFFEARKMM+ M G MG+ G+ RKS K K K RGPTPPK
Sbjct 421 SEVNQLVDRFFEARKMMAQMSGRMGMGGMNRKS--------NRKGKKGKKGKGRGPTPPK 472
Query 475 VKSPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
V+ F A G PDLS MP GLD+LPPGL D+S+ + P KK
Sbjct 473 VRGGFPGMPGGMPA----GFPDLSNMPAGLDQLPPGLEGIDVSQFQ-PKKK 518
>gi|289755028|ref|ZP_06514406.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
EAS054]
gi|289695615|gb|EFD63044.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
EAS054]
Length=394
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/367 (100%), Positives = 367/367 (100%), Gaps = 0/367 (0%)
Query 136 CDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAGLAEARAKHFDVVIV 195
CDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAGLAEARAKHFDVVIV
Sbjct 12 CDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAGLAEARAKHFDVVIV 71
Query 196 DTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFGEGVGFTGVALTK 255
DTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFGEGVGFTGVALTK
Sbjct 72 DTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFGEGVGFTGVALTK 131
Query 256 LDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRILGMGDVLSLIEQAEQ 315
LDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRILGMGDVLSLIEQAEQ
Sbjct 132 LDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRILGMGDVLSLIEQAEQ 191
Query 316 VFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAAQMKDALAEVDDK 375
VFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAAQMKDALAEVDDK
Sbjct 192 VFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAAQMKDALAEVDDK 251
Query 376 QLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQLVERFFEARKMMSSML 435
QLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQLVERFFEARKMMSSML
Sbjct 252 QLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQLVERFFEARKMMSSML 311
Query 436 GGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFGVPGMPGLAGLPGGLP 495
GGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFGVPGMPGLAGLPGGLP
Sbjct 312 GGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFGVPGMPGLAGLPGGLP 371
Query 496 DLSQMPK 502
DLSQMPK
Sbjct 372 DLSQMPK 378
>gi|319951000|ref|ZP_08024870.1| signal recognition particle protein [Dietzia cinnamea P4]
gi|319435343|gb|EFV90593.1| signal recognition particle protein [Dietzia cinnamea P4]
Length=529
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/536 (73%), Positives = 436/536 (82%), Gaps = 19/536 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL+ LRGKGRL+DADIDAT REIRLALLEADV+LPVVRAFI R+KERA+
Sbjct 1 MFESLSDRLTGALKDLRGKGRLSDADIDATAREIRLALLEADVALPVVRAFISRVKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIV+ EL +ILGGE R + FAK PPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSEALNPAQQVVKIVDAELTAILGGEARRIEFAKQPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGAS-----PESGPGDPV 175
A L+GQGHTPLLVACDLQRP AV+QL++VGERAGV FAPHPG S E G +PV
Sbjct 121 AYWLKGQGHTPLLVACDLQRPGAVDQLRIVGERAGVQTFAPHPGTSVGGDGAEIGVQEPV 180
Query 176 AVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDA 235
+VA GLA ARAK DVVIVDTAGRLGIDEE+MAQA IRDA+ P E FVLDAMIGQDA
Sbjct 181 SVAQRGLAHARAKMHDVVIVDTAGRLGIDEEMMAQARGIRDAVQPHETFFVLDAMIGQDA 240
Query 236 VTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDR 295
V TA AF EGVGFTGV LTKLDGDARGGAALSVRE+TG PI+FAS GEKLEDFDVFHP+R
Sbjct 241 VVTAEAFREGVGFTGVVLTKLDGDARGGAALSVRELTGTPIMFASDGEKLEDFDVFHPER 300
Query 296 MASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNL 355
M+SRILGMGDVLSLIEQAE VFDA++AE+ AAKIG+GELTLEDFL+QM+ +RKMGPIGNL
Sbjct 301 MSSRILGMGDVLSLIEQAETVFDAKEAEKTAAKIGSGELTLEDFLDQMMMIRKMGPIGNL 360
Query 356 LGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVS 415
LGMLPG MK A+ ++D+K LDR+QAIIRGMTP+ERADPKIIN SRR RIANGSGVTV+
Sbjct 361 LGMLPGGKDMKAAVGDIDEKHLDRIQAIIRGMTPEERADPKIINGSRRQRIANGSGVTVT 420
Query 416 EVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKV 475
+VNQLV+RFFEARKMMS M G MG+PG GRK+ + K K K RGPTPPK
Sbjct 421 DVNQLVDRFFEARKMMSRMAGQMGMPGAGRKNQRKGKK-------GKGKGKGRGPTPPKN 473
Query 476 K-------SPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
+ G+P PGG+PDLSQMP GLD+LPPGL DL LKFP +
Sbjct 474 RGVMPGMPGMPGMPPGGMPGMPPGGMPDLSQMPPGLDQLPPGLEGIDLDNLKFPKR 529
>gi|326382869|ref|ZP_08204559.1| signal recognition particle protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198459|gb|EGD55643.1| signal recognition particle protein [Gordonia neofelifaecis NRRL
B-59395]
Length=524
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/531 (74%), Positives = 428/531 (81%), Gaps = 14/531 (2%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL+ LRGKGRLTDAD+DAT REIRLALLEADVSLPVVR FI RIKERA+
Sbjct 1 MFESLSDRLTGALKDLRGKGRLTDADVDATAREIRLALLEADVSLPVVRTFIARIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQ+VKIVNEELI ILGGETR + AK PPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSGALNPAQQIVKIVNEELIGILGGETRRVQLAKNPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASP-------ESGPGD 173
+A L QGHTPLLVACDLQRP AV QLQ+VGERAGVPVFAPHPG S G D
Sbjct 121 SAWLVKQGHTPLLVACDLQRPGAVQQLQIVGERAGVPVFAPHPGTSVGGEGALGVDGSAD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PVAVA AG+ EA+ K DVVI+DTAGRLGID ELM QA+ IRDA +PDEVLFVLDAMIGQ
Sbjct 181 PVAVAQAGVQEAKDKQHDVVIIDTAGRLGIDAELMRQASDIRDATSPDEVLFVLDAMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAVTTA AF +GV FTGV LTKLDGDARGGAALSVRE+TG PI+FASTGEKLEDFDVFHP
Sbjct 241 DAVTTAQAFADGVDFTGVVLTKLDGDARGGAALSVREITGRPIMFASTGEKLEDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
DRMASRILGMGDVLSLIEQAEQ FD +A+ A KI GELTL+DFL+QML +RKMGPIG
Sbjct 301 DRMASRILGMGDVLSLIEQAEQHFDEAEAQRTAEKISQGELTLDDFLQQMLMIRKMGPIG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
NLLGMLPGA MKDAL++VDDKQLD++QAIIRGMTP ER +PKIINASRR+RIA GSGVT
Sbjct 361 NLLGMLPGAGDMKDALSQVDDKQLDKIQAIIRGMTPAERDNPKIINASRRIRIAKGSGVT 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPP 473
V++VNQLV+RFF ARKMMS M G MG+ G GRK+A + K + + PTPP
Sbjct 421 VTDVNQLVDRFFAARKMMSQMSGRMGMGGGGRKNARKGKGKGKKGGKGRGRG----PTPP 476
Query 474 KVKSPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGK 524
K GLP G+ DLS MP GLDELPPGL DL+ LKFP K
Sbjct 477 KAMRGGFP--GMPGMGLPPGM-DLSSMPPGLDELPPGLEGIDLNNLKFPKK 524
>gi|331698510|ref|YP_004334749.1| signal recognition particle protein [Pseudonocardia dioxanivorans
CB1190]
gi|326953199|gb|AEA26896.1| signal recognition particle protein [Pseudonocardia dioxanivorans
CB1190]
Length=509
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/527 (72%), Positives = 429/527 (82%), Gaps = 21/527 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+F++LSDRL AL GLRGKGRL++ADIDAT REIR+ALLEADV+LPVVRAFI RIKERA+
Sbjct 1 MFDTLSDRLGTALAGLRGKGRLSEADIDATAREIRIALLEADVALPVVRAFIARIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVNEELI++LGGETR +A AK PP+V+MLAGLQGSGKTTLAGKL
Sbjct 61 GAEVSQALNPAQQVVKIVNEELIAVLGGETRRIALAKEPPSVIMLAGLQGSGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
A L+GQGHTPLLVACDLQRP AVNQLQ+VGERAGV FAP PG +G GDPV VA
Sbjct 121 ARWLKGQGHTPLLVACDLQRPNAVNQLQIVGERAGVTTFAPEPG----NGVGDPVDVARR 176
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
G+A AR K +D+VIVDTAGRLG+D ELM QA+ IRDA+ PDE LFV+DAMIGQDAV TA
Sbjct 177 GVAHARDKMYDIVIVDTAGRLGVDAELMQQASDIRDAVRPDETLFVVDAMIGQDAVATAE 236
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF +GVGF+GV LTKLDGDARGGAALSVREVTG PILFAS GEKLEDFDVFHPDRMASRI
Sbjct 237 AFRDGVGFSGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDVFHPDRMASRI 296
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGD+L+LIEQAEQVFDA++A+ A KIG+GELTLEDFL+QMLA+RKMGPIGN+LGMLP
Sbjct 297 LGMGDLLTLIEQAEQVFDAEKAQATADKIGSGELTLEDFLDQMLAIRKMGPIGNILGMLP 356
Query 361 GA--AQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVN 418
GA AQMK+ALA+VDDKQLD++QAIIRGMTP ER +PKIIN SRRLRIANGSGVTVS+VN
Sbjct 357 GANSAQMKEALAQVDDKQLDKLQAIIRGMTPAERENPKIINGSRRLRIANGSGVTVSDVN 416
Query 419 QLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSP 478
LV RFFEARK M +M + +K + GKK+ KG +GPT + + P
Sbjct 417 DLVNRFFEARKQMKAM-------AGQFGFGGGGRRQSKTRKGKKNAKGRKGPT--QARRP 467
Query 479 FGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
GMP ++ LP L L GLD+LPPG FD SKL F KK
Sbjct 468 V---GMPDMSQLPSSLQQLPPGLGGLDQLPPG---FDPSKLNFGKKK 508
>gi|257055023|ref|YP_003132855.1| signal recognition particle subunit FFH/SRP54 (srp54) [Saccharomonospora
viridis DSM 43017]
gi|256584895|gb|ACU96028.1| signal recognition particle subunit FFH/SRP54 (srp54) [Saccharomonospora
viridis DSM 43017]
Length=515
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/522 (76%), Positives = 426/522 (82%), Gaps = 15/522 (2%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
VF++LSDRLT+ LQ LRGKG+L+DADIDAT REIR+ALLEADV+LPVVR FI +KERA+
Sbjct 4 VFDTLSDRLTSVLQNLRGKGKLSDADIDATAREIRIALLEADVALPVVREFIKHVKERAK 63
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQV+KIVNEELI+ILGGETR L AKTPP+V+MLAGLQGSGKTTLAGKL
Sbjct 64 GAEVSQALNPAQQVIKIVNEELIAILGGETRRLNLAKTPPSVIMLAGLQGSGKTTLAGKL 123
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
A L+ QGHTPLLVACDLQRP AV QLQVVGERAGV FAP PG +G GDPV VA
Sbjct 124 ARWLKKQGHTPLLVACDLQRPNAVTQLQVVGERAGVTTFAPEPG----NGVGDPVDVAHR 179
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
+ EAR DVVIVDTAGRLG+DEE+M QAA IRDAI+PDE LFV+DAMIGQDAVTTA
Sbjct 180 SIEEARRAQHDVVIVDTAGRLGVDEEMMRQAADIRDAISPDETLFVVDAMIGQDAVTTAE 239
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF +GVGFTGV LTKLDGDARGGAALSVR VTG PILFAS GEKLEDFDVFHPDRMASRI
Sbjct 240 AFRDGVGFTGVVLTKLDGDARGGAALSVRHVTGKPILFASNGEKLEDFDVFHPDRMASRI 299
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVL+LIEQAEQ FD ++AEEAAAK+G GELTLEDFLEQM AVR+MGPIGNLL MLP
Sbjct 300 LGMGDVLTLIEQAEQAFDQEKAEEAAAKLGTGELTLEDFLEQMQAVRRMGPIGNLLSMLP 359
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMK+ LA+VDD QLDR+QAIIRGMTP ERA+PKIINASRR RIA GSGVTV EVN L
Sbjct 360 GAGQMKEQLAQVDDSQLDRLQAIIRGMTPAERANPKIINASRRQRIAKGSGVTVREVNDL 419
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
V RFFEARKMM M G G G G SAT+K KG KGK GK PTPPKVK
Sbjct 420 VNRFFEARKMMQQMAGRFGF-GAG-VSATKKRKGKKGKKGKHKG-----PTPPKVKG-GF 471
Query 481 VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFP 522
G PG GG+PDLSQ+ GL+ELPPG FD SKL P
Sbjct 472 PGGFPGGFPQGGGMPDLSQLGGGLNELPPG---FDPSKLNLP 510
>gi|324999618|ref|ZP_08120730.1| signal recognition particle protein [Pseudonocardia sp. P1]
Length=522
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/536 (72%), Positives = 431/536 (81%), Gaps = 25/536 (4%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+F+SLS+RL + L+ LRGKGRL+DADIDAT REIR+ALLEADV+LPVVR FI RIKERA+
Sbjct 1 MFDSLSERLGSTLRDLRGKGRLSDADIDATAREIRIALLEADVALPVVRGFIARIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
G+EVS ALNPAQQVVKIVNEEL++ILGGETR L AK PPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GSEVSQALNPAQQVVKIVNEELVTILGGETRRLNLAKEPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGAS-----PESGPGDPV 175
A L+GQGHTPLLVACDLQRP AVNQLQ+VGERAGV FAPHPGA+ PE GPGDPV
Sbjct 121 ARWLKGQGHTPLLVACDLQRPNAVNQLQIVGERAGVQTFAPHPGATGSGELPE-GPGDPV 179
Query 176 AVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDA 235
VA G+A AR K +DVV+VDTAGRLG+DEELM QA+ IR A++PDEVLFV+DAMIGQDA
Sbjct 180 GVARGGIAHAREKQYDVVVVDTAGRLGVDEELMRQASDIRTAVDPDEVLFVVDAMIGQDA 239
Query 236 VTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDR 295
V TA AF +GVGFTGV LTKLDGDARGGAALSVREVTG PILFAS GEKLEDFDVFHPDR
Sbjct 240 VATAEAFRDGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDVFHPDR 299
Query 296 MASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNL 355
M+SRILGMGD+L+LIEQAEQVFDA+Q+ AA KI +GEL+LEDFL+QM+ +RKMGPIGN+
Sbjct 300 MSSRILGMGDLLTLIEQAEQVFDAEQSAAAAQKISSGELSLEDFLQQMMQLRKMGPIGNI 359
Query 356 LGMLPGA--AQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
L MLPGA QMK AL +VDDKQ+DR+QAIIRGMTP ER DPKIINASRR RIA GSGVT
Sbjct 360 LNMLPGANQGQMKAALEQVDDKQIDRLQAIIRGMTPAERDDPKIINASRRQRIATGSGVT 419
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGA-KGKSGKKSKKGTRGPTP 472
VS+VN LV RFFEARKMM M G G G GRK+ + K A K K KK + G
Sbjct 420 VSDVNDLVNRFFEARKMMKQMAGQFGFGGGGRKATKKVPKNARKAKQAKKRRSGN----- 474
Query 473 PKVKSPFGVPGMPGLAGLPGGLPDLSQMPKGL---DELPPGLADFDLSKLKFPGKK 525
P ++ G G P L+ LP P L Q+P GL D+LPPG FD S L F KK
Sbjct 475 PANRA--GQAGGPDLSNLP---PSLQQLPPGLAGMDQLPPG---FDPSTLDFGKKK 522
>gi|25028521|ref|NP_738575.1| putative signal recognition particle protein [Corynebacterium
efficiens YS-314]
gi|259507575|ref|ZP_05750475.1| signal recognition particle protein [Corynebacterium efficiens
YS-314]
gi|23493806|dbj|BAC18775.1| putative signal recognition particle protein [Corynebacterium
efficiens YS-314]
gi|259164849|gb|EEW49403.1| signal recognition particle protein [Corynebacterium efficiens
YS-314]
Length=540
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/548 (69%), Positives = 423/548 (78%), Gaps = 31/548 (5%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRL AL+GLRGKG+LT+ADI+AT REIRLALLEADVSL VVR+FI RIKERA
Sbjct 1 MFESLSDRLNNALKGLRGKGKLTEADINATAREIRLALLEADVSLTVVRSFISRIKERAA 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQV+KIVNEEL+ ILGGETR L AKTPPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSQALNPAQQVIKIVNEELVQILGGETRRLQLAKTPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPES-------GPGD 173
+ L QGHTP+LVACDLQRP AV QLQ+VGERAGV FAP PG S +S GD
Sbjct 121 SKHLAAQGHTPMLVACDLQRPGAVQQLQIVGERAGVTTFAPDPGTSIDSYEHEMGTSHGD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PVAVA AG+ EA+ D+VIVDTAGRLGIDE LM QA IRDAINPDEVLFV+D+MIGQ
Sbjct 181 PVAVAQAGIEEAKRTQHDIVIVDTAGRLGIDETLMTQARNIRDAINPDEVLFVIDSMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAV TA AF +GV FTGV LTKLDGDARGGAALS+REVTG PI+FASTGEKLEDFDVFHP
Sbjct 241 DAVDTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGKPIMFASTGEKLEDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
+RMASRILGMGDVLSLIEQAE V D +AE AA K+G+GELTLEDFL+QML +R+MGPIG
Sbjct 301 ERMASRILGMGDVLSLIEQAESVMDQDKAEAAAKKLGSGELTLEDFLDQMLMIRRMGPIG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
N+L MLPG QM D VD+K LDR+QAIIRGMTP ER DPKI+NASRR RIANGSGVT
Sbjct 361 NILKMLPGGKQMSDMADMVDEKHLDRIQAIIRGMTPAERDDPKILNASRRKRIANGSGVT 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPP 473
VSEVNQLVERFFEA+KMM M G G+ +GR + ++ KG KGK+GK+ K RGPT P
Sbjct 421 VSEVNQLVERFFEAKKMMGKMAGQFGMGPVGRSATKKQPKGRKGKNGKR-KPARRGPTQP 479
Query 474 KVKSPFG----------------VPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLS 517
K+ + G AG GG+P + MPK LP G+ + DL
Sbjct 480 KMPMGGMPGMPGMGGAGMPDLAELQKQLGAAG--GGMPKIPGMPK----LPKGMENIDLD 533
Query 518 KLKFPGKK 525
L F GKK
Sbjct 534 NLDF-GKK 540
>gi|256379924|ref|YP_003103584.1| signal recognition particle protein [Actinosynnema mirum DSM
43827]
gi|255924227|gb|ACU39738.1| signal recognition particle protein [Actinosynnema mirum DSM
43827]
Length=518
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/476 (77%), Positives = 405/476 (86%), Gaps = 8/476 (1%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+F +LSDRLT+ LQ LRGKGRL+DADIDAT REIR+ALLEADV+LPVVRAFI ++KERA+
Sbjct 1 MFNTLSDRLTSVLQNLRGKGRLSDADIDATAREIRVALLEADVALPVVRAFIAKVKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQV+KIVNEEL++ILGGETR + AK PP+V+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSQALNPAQQVIKIVNEELVAILGGETRRINLAKNPPSVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
A LRGQGHTPLLVACDLQRP AV QLQVVGERAGV VFAP PG +G GDPV VA
Sbjct 121 AKWLRGQGHTPLLVACDLQRPNAVTQLQVVGERAGVSVFAPEPG----NGVGDPVDVAKR 176
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
G+ EA+ D+V+VDTAGRLG+DEE+M QAA IR A+NPDEVLFV+DAMIGQDAV TA
Sbjct 177 GVEEAKRAQHDIVVVDTAGRLGVDEEMMRQAADIRAAVNPDEVLFVVDAMIGQDAVNTAT 236
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF EGVGFTGV LTKLDGDARGGAALSVREVTG PILFAS GEKLEDFDVFHPDRMASRI
Sbjct 237 AFSEGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDVFHPDRMASRI 296
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVL+LIE AEQ FDA++AE AA K+G+G+LTLEDFLEQMLA+RKMGPI NLLGMLP
Sbjct 297 LGMGDVLTLIEHAEQAFDAERAEAAAVKMGSGQLTLEDFLEQMLAIRKMGPIANLLGMLP 356
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMKD LA +D+K LDRVQAIIRGMTP ER DPKIINASRRLRIANGSGV VS+VN L
Sbjct 357 GAGQMKDQLAMLDEKHLDRVQAIIRGMTPAERDDPKIINASRRLRIANGSGVRVSDVNDL 416
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVK 476
V RFF+ARKMMS M G G+PG G K+ + +KG KGK GK + PTPPK +
Sbjct 417 VTRFFDARKMMSQMAGRFGLPGAGGKNNRKNAKGKKGKKGKGGRG----PTPPKAR 468
>gi|300783873|ref|YP_003764164.1| signal recognition particle, subunit SRP54 [Amycolatopsis mediterranei
U32]
gi|299793387|gb|ADJ43762.1| signal recognition particle, subunit SRP54 [Amycolatopsis mediterranei
U32]
gi|340525267|gb|AEK40472.1| signal recognition particle protein [Amycolatopsis mediterranei
S699]
Length=512
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/524 (72%), Positives = 425/524 (82%), Gaps = 20/524 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+F++LSDRLTAALQ L KG+L+DADIDAT REIR+ALLEADV+L VV+ FI +IKERA+
Sbjct 1 MFDTLSDRLTAALQTLTRKGKLSDADIDATAREIRIALLEADVALGVVKTFIAKIKERAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQV+KIVNEEL+ ILGGETR L AKTPPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSQALNPAQQVIKIVNEELVGILGGETRRLNLAKTPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
A L+ QGHTP+LVACDLQRP AV QLQVVGERAGV FAP PG +G GDPV VA
Sbjct 121 ALWLKKQGHTPMLVACDLQRPNAVTQLQVVGERAGVVTFAPEPG----NGVGDPVDVARR 176
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
+AEA+ DVV+VDTAGRLG+DEELM QAA IRDA+ PDEVLFV+DAMIGQDAVTTA
Sbjct 177 AIAEAKHAQHDVVVVDTAGRLGVDEELMKQAADIRDAVEPDEVLFVVDAMIGQDAVTTAQ 236
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF +GVGF+GV LTKLDGDARGGAALSVREVTG PILFAS GEKLEDFD FHPDRMASRI
Sbjct 237 AFQDGVGFSGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDTFHPDRMASRI 296
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVL+LIEQAEQ FD +QAE+AA K+ +G+LTLEDFLEQMLAVRKMGPIGNLLGMLP
Sbjct 297 LGMGDVLTLIEQAEQAFDQKQAEKAAEKLSSGQLTLEDFLEQMLAVRKMGPIGNLLGMLP 356
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMKD LA+VDDK LD++QAIIRGMTP ER DPK+IN SRRLRIANGSGVTV EVN L
Sbjct 357 GAGQMKDQLAQVDDKHLDKLQAIIRGMTPAEREDPKMINGSRRLRIANGSGVTVREVNDL 416
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPF- 479
V RFFEARKMM+ M + G+ + GKK KKG RGPT PKV+ F
Sbjct 417 VNRFFEARKMMAQM---------AGRFGFGGGGGSSKRKGKKGKKGGRGPTQPKVRGGFP 467
Query 480 -GVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFP 522
G+P +P +PGG+PDLSQ+ G++++P FD +K K P
Sbjct 468 GGMPMLPPGGQMPGGMPDLSQL-GGMNDVP----GFDPTKFKLP 506
>gi|19553259|ref|NP_601261.1| signal recognition particle GTPase [Corynebacterium glutamicum
ATCC 13032]
gi|62390895|ref|YP_226297.1| Signal recognition particle GTPase [Corynebacterium glutamicum
ATCC 13032]
gi|21324828|dbj|BAB99451.1| Signal recognition particle GTPase [Corynebacterium glutamicum
ATCC 13032]
gi|41326234|emb|CAF20396.1| Signal recognition particle GTPase [Corynebacterium glutamicum
ATCC 13032]
Length=547
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/482 (75%), Positives = 403/482 (84%), Gaps = 10/482 (2%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRL +AL GLRGKG+LT+ADI+ATTREIRLALLEADVSL VVRAFI+RIKERA
Sbjct 1 MFESLSDRLNSALSGLRGKGKLTEADINATTREIRLALLEADVSLTVVRAFINRIKERAV 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQV+KIVNEEL+ ILGGETR L+ AK PPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSQALNPAQQVIKIVNEELVQILGGETRRLSLAKNPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPES-------GPGD 173
+ L QGHTP+LVACDLQRP AV QLQ+VGERAGV FAP PG S +S GD
Sbjct 121 SKHLVKQGHTPMLVACDLQRPGAVQQLQIVGERAGVTTFAPDPGTSIDSLEHEMGTSHGD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PV VA AG+ EA+ D+VIVDTAGRLGIDE LM QA IR+AINPDEVLFV+D+MIGQ
Sbjct 181 PVEVARAGIEEAKRTQHDIVIVDTAGRLGIDETLMTQARNIREAINPDEVLFVIDSMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAV TA AF +GV FTGV LTKLDGDARGGAALS+REVTG PI+FASTGEKL+DFDVFHP
Sbjct 241 DAVDTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGKPIMFASTGEKLDDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
+RMASRILGMGDVLSLIEQAE V D ++AE AA K+G+GELTLEDFL+QML +R+MGPIG
Sbjct 301 ERMASRILGMGDVLSLIEQAEAVMDQEKAEVAAQKLGSGELTLEDFLDQMLMIRRMGPIG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
N+L MLPG QM VD+KQLDR+QAIIRGMTP ER +PKI+NASRR RIANGSGVT
Sbjct 361 NILKMLPGGKQMSQMADMVDEKQLDRIQAIIRGMTPAERDNPKILNASRRKRIANGSGVT 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRK-SKGAKGKSGKKSKKGTRGPTP 472
VSEVN+LVERFFEARKMM M G G+ G G +SAT+K +KG KGK+GK+ K +GPT
Sbjct 421 VSEVNKLVERFFEARKMMGQMAGQFGM-GPGSRSATKKQAKGRKGKNGKR-KPAKKGPTQ 478
Query 473 PK 474
PK
Sbjct 479 PK 480
>gi|344044732|gb|EGV40407.1| signal recognition particle protein [Corynebacterium glutamicum
S9114]
Length=544
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/551 (68%), Positives = 423/551 (77%), Gaps = 33/551 (5%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRL +AL GLRGKG+LT+ADI+AT REIRLALLEADVSL VVRAFI+RIKERA
Sbjct 1 MFESLSDRLNSALSGLRGKGKLTEADINATAREIRLALLEADVSLTVVRAFINRIKERAV 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQV+KIVNEEL+ ILGGETR L+ AK PPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSQALNPAQQVIKIVNEELVQILGGETRRLSLAKNPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPES-------GPGD 173
+ L QGHTP+LVACDLQRP AV QLQ+VGERAGV FAP PG S +S GD
Sbjct 121 SKHLVKQGHTPMLVACDLQRPGAVQQLQIVGERAGVTTFAPDPGTSIDSLEHEMGTSHGD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PV VA AG+ EA+ D+VIVDTAGRLGIDE LM QA IR+AINPDEVLFV+D+MIGQ
Sbjct 181 PVEVARAGIEEAKRTQHDIVIVDTAGRLGIDETLMTQARNIREAINPDEVLFVIDSMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAV TA AF +GV FTGV LTKLDGDARGGAALS+REVTG PI+FASTGEKL+DFDVFHP
Sbjct 241 DAVDTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGKPIMFASTGEKLDDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
+RMASRILGMGDVLSLIEQAE V D ++AE AA K+G+GELTLEDFL+QML +R+MGPIG
Sbjct 301 ERMASRILGMGDVLSLIEQAEAVMDQEKAEVAAQKLGSGELTLEDFLDQMLMIRRMGPIG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
N+L MLPG QM VD+KQLDR+QAIIRGMTP ER +PKI+NASRR RIANGSGVT
Sbjct 361 NILKMLPGGKQMSQMADMVDEKQLDRIQAIIRGMTPAERDNPKILNASRRKRIANGSGVT 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRK-SKGAKGKSGKKSKKGTRGPTP 472
VSEVN+LVERFFEARKMM M G G+ G G +SAT+K +KG KGK+GK+ K +GPT
Sbjct 421 VSEVNKLVERFFEARKMMGQMAGQFGM-GPGSRSATKKQAKGRKGKNGKR-KPAKKGPTQ 478
Query 473 PKVKSPFGVPGMPGLAGLPGGLPDLSQ------------------MPKGLDELPPGLADF 514
PK+ L +L + MPK LP G+ +
Sbjct 479 PKMPMGGMPGMPGMGGAGMPDLAELQKQLGGADGGMGGLGGGLPGMPK----LPKGMENI 534
Query 515 DLSKLKFPGKK 525
DL+ L F GKK
Sbjct 535 DLNNLDF-GKK 544
>gi|145296022|ref|YP_001138843.1| hypothetical protein cgR_1945 [Corynebacterium glutamicum R]
gi|140845942|dbj|BAF54941.1| hypothetical protein [Corynebacterium glutamicum R]
Length=544
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/551 (68%), Positives = 422/551 (77%), Gaps = 33/551 (5%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRL +AL GLRGKG+LT+ADI+AT REIRLALLEADVSL VVRAFI+RIKERA
Sbjct 1 MFESLSDRLNSALSGLRGKGKLTEADINATAREIRLALLEADVSLTVVRAFINRIKERAV 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQV+KIVNEEL+ ILGGETR L+ AK PPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSQALNPAQQVIKIVNEELVQILGGETRRLSLAKNPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPES-------GPGD 173
+ L QGHTP+LVACDLQRP AV QLQ+VGERAGV FAP PG S +S GD
Sbjct 121 SKHLVKQGHTPMLVACDLQRPGAVQQLQIVGERAGVTTFAPDPGTSIDSLEHEMGTSHGD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PV VA AG+ EA+ D+VIVDTAGRLGIDE LM QA IR+AINPDEVLFV+D+MIGQ
Sbjct 181 PVEVARAGIEEAKRTQHDIVIVDTAGRLGIDETLMTQARNIREAINPDEVLFVIDSMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAV TA AF +GV FTGV LTKLDGDARGGAALS+REVTG PI+FASTGEKL+DFDVFHP
Sbjct 241 DAVDTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGKPIMFASTGEKLDDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
+RMASRILGMGDVLSLIEQAE V D ++AE AA K+G+GELTLEDFL+QML +R+MGPIG
Sbjct 301 ERMASRILGMGDVLSLIEQAEAVMDQEKAEVAAQKLGSGELTLEDFLDQMLMIRRMGPIG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
N+L MLPG QM VD+KQLDR+QAIIRGMTP ER +PKI+NASRR RIANGSGVT
Sbjct 361 NILKMLPGGKQMSQMADMVDEKQLDRIQAIIRGMTPAERDNPKILNASRRKRIANGSGVT 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRK-SKGAKGKSGKKSKKGTRGPTP 472
V EVN+LVERFFEARKMM M G G+ G G +SAT+K +KG KGK+GK+ K +GPT
Sbjct 421 VPEVNKLVERFFEARKMMGQMAGQFGM-GPGSRSATKKQAKGRKGKNGKR-KPAKKGPTQ 478
Query 473 PKVKSPFGVPGMPGLAGLPGGLPDLSQ------------------MPKGLDELPPGLADF 514
PK+ L +L + MPK LP G+ +
Sbjct 479 PKMPMGGMPGMPGMGGAGMPDLAELQKQLGGADGGMGGLGGGLPGMPK----LPKGMENI 534
Query 515 DLSKLKFPGKK 525
DL+ L F GKK
Sbjct 535 DLNNLDF-GKK 544
>gi|258653309|ref|YP_003202465.1| signal recognition particle protein [Nakamurella multipartita
DSM 44233]
gi|258556534|gb|ACV79476.1| signal recognition particle protein [Nakamurella multipartita
DSM 44233]
Length=515
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/532 (69%), Positives = 415/532 (79%), Gaps = 29/532 (5%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FE+LSDRL+ LRGKGRLT AD+D T REIR+ALLEADV+LPVVRAFI RIKERA
Sbjct 1 MFETLSDRLSGVFTNLRGKGRLTPADVDRTCREIRVALLEADVALPVVRAFIARIKERAN 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
G VS+ALNPAQQ++KIVNEEL++ILGGETR L +AK PPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GVIVSAALNPAQQIIKIVNEELVAILGGETRRLTYAKNPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
A L+GQGHTPLLVA DLQRP AV QLQ+VGE+AGV VFAP PG +G GDPVAVA A
Sbjct 121 ALWLKGQGHTPLLVASDLQRPNAVTQLQIVGEQAGVQVFAPEPG----NGVGDPVAVARA 176
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
G+A A+ + D+VIVDTAGRLG+D ++M QA IRDA+ P E+LFVLDAM+GQDAVTTA
Sbjct 177 GVAHAKVRLHDIVIVDTAGRLGVDADMMQQAVDIRDAVQPQEILFVLDAMVGQDAVTTAE 236
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF +GVGF GV LTKLDGDARGGAALSVR VTG PI+FASTGEKL DFDVFHPDRMASRI
Sbjct 237 AFRDGVGFNGVVLTKLDGDARGGAALSVRHVTGQPIMFASTGEKLADFDVFHPDRMASRI 296
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGD+L+LIEQAEQ F+A QAE AAK+ E TLEDFLEQM+ +RKMGPIG LLGMLP
Sbjct 297 LGMGDMLTLIEQAEQHFEADQAEAMAAKMAGNEFTLEDFLEQMMMIRKMGPIGGLLGMLP 356
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMKDALA VDD+ +DR AII+ MTP ER DPKIINASRR RIA GSG TVS+VN L
Sbjct 357 GAGQMKDALANVDDRDIDRTAAIIQSMTPAERQDPKIINASRRQRIARGSGSTVSQVNAL 416
Query 421 VERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVKSPFG 480
VERFFEARKMMSSM G G PG + + RK+ + KSGK++ RGPT PKVK G
Sbjct 417 VERFFEARKMMSSMAGRFGFPGA--RPSNRKAAKGRRKSGKRTTG--RGPTQPKVKGMPG 472
Query 481 V--------PGM--PGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFP 522
PGM PG+ G PG +P L Q P DFD +KLKFP
Sbjct 473 GFPGMGALPPGMGAPGM-GAPGAMPGLDQFP----------GDFDPTKLKFP 513
>gi|302525168|ref|ZP_07277510.1| signal recognition particle protein [Streptomyces sp. AA4]
gi|302434063|gb|EFL05879.1| signal recognition particle protein [Streptomyces sp. AA4]
Length=512
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/434 (80%), Positives = 380/434 (88%), Gaps = 4/434 (0%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+F++LSDRLT+ALQ L KGRL+DADIDAT REIR+ALLEADV+LPVV+AFI +IK+RA+
Sbjct 1 MFDTLSDRLTSALQSLSRKGRLSDADIDATAREIRIALLEADVALPVVKAFIAKIKDRAK 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQVVKIVNEEL+ ILGGETR L AK PP+V+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSQALNPAQQVVKIVNEELVGILGGETRRLNLAKNPPSVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
A L+ QGH P+LVACDLQRP AVNQLQ+VGERAGV FAP PG +G GDPV VA
Sbjct 121 AMWLKKQGHAPMLVACDLQRPNAVNQLQIVGERAGVTTFAPEPG----NGVGDPVDVARR 176
Query 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
+ EA+ +D+V+VDTAGRLG+DEELM QAA IR+A+ PDEVLFV+DAMIGQDAVTTA
Sbjct 177 AIEEAKHAQYDIVVVDTAGRLGVDEELMKQAADIREAVQPDEVLFVVDAMIGQDAVTTAE 236
Query 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
AF +GVGFTGV LTKLDGDARGGAALSVREVTG PILFAS GEKLEDFD FHPDRMASRI
Sbjct 237 AFRDGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDTFHPDRMASRI 296
Query 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
LGMGDVL+LIEQAEQ FD +QAE+AA K+ +G+LTLEDFLEQMLAVRKMGPIGNLLGMLP
Sbjct 297 LGMGDVLTLIEQAEQHFDQEQAEQAAQKLTSGQLTLEDFLEQMLAVRKMGPIGNLLGMLP 356
Query 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSEVNQL 420
GA QMKD LA VDDKQLDR+QAIIRGMTP ERADPKIIN SRRLRIANGSGVTV EVN L
Sbjct 357 GAGQMKDQLAAVDDKQLDRLQAIIRGMTPAERADPKIINGSRRLRIANGSGVTVREVNDL 416
Query 421 VERFFEARKMMSSM 434
V RFFEARKMM+ M
Sbjct 417 VNRFFEARKMMAQM 430
>gi|289759036|ref|ZP_06518414.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
T85]
gi|289714600|gb|EFD78612.1| signal recognition particle protein ffh [Mycobacterium tuberculosis
T85]
Length=349
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/349 (99%), Positives = 349/349 (100%), Gaps = 0/349 (0%)
Query 177 VAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAV 236
+AAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAV
Sbjct 1 MAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAV 60
Query 237 TTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRM 296
TTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRM
Sbjct 61 TTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRM 120
Query 297 ASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLL 356
ASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLL
Sbjct 121 ASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLL 180
Query 357 GMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSE 416
GMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSE
Sbjct 181 GMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVTVSE 240
Query 417 VNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVK 476
VNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVK
Sbjct 241 VNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAKGKSGKKSKKGTRGPTPPKVK 300
Query 477 SPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
SPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK
Sbjct 301 SPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 349
>gi|336325840|ref|YP_004605806.1| signal recognition particle protein [Corynebacterium resistens
DSM 45100]
gi|336101822|gb|AEI09642.1| signal recognition particle protein [Corynebacterium resistens
DSM 45100]
Length=527
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/535 (68%), Positives = 425/535 (80%), Gaps = 18/535 (3%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRLT AL+GLRGKGRLT+ DI+AT REIRLALLEADVSLPVVR FI+R+KERAR
Sbjct 1 MFESLSDRLTGALKGLRGKGRLTEEDINATAREIRLALLEADVSLPVVRGFINRVKERAR 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GA VS ALNPAQQV+KIVNEEL ILGGETR L AK PPT++MLAGLQG+GKTTLAGKL
Sbjct 61 GAAVSEALNPAQQVIKIVNEELQQILGGETRRLNLAKHPPTIIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPES-------GPGD 173
+ L QGHTP+LVACDLQRP AV QLQ+VGERAGVPVFAP PG S +S GD
Sbjct 121 SKHLVKQGHTPMLVACDLQRPGAVQQLQIVGERAGVPVFAPEPGTSLDSHDHEMGTSKGD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
P+ VA G+ EA D+VI+DTAGRLGIDE LM QA IRDA+ PDEVLFV+DAMIGQ
Sbjct 181 PIEVAQRGVEEAYRTQHDIVIIDTAGRLGIDEVLMKQARDIRDAVEPDEVLFVIDAMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAVTTA AF +GV FTGV LTKLDGDARGGAALS+REVTG PIL+ASTGEKLEDFD+FHP
Sbjct 241 DAVTTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGKPILYASTGEKLEDFDIFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
DRMA+RILGMGDVL+LIEQAEQV D ++A +A ++ +GELTLEDFLEQM+ +RKMGP+G
Sbjct 301 DRMANRILGMGDVLTLIEQAEQVMDQEKAMTSAERMASGELTLEDFLEQMMMIRKMGPLG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
N+L MLPG +QM VD+KQLDR+QAIIRGMTP ER DPKI+NASRR RIANGSGV+
Sbjct 361 NILKMLPGGSQMSQMADMVDEKQLDRIQAIIRGMTPGERQDPKILNASRRKRIANGSGVS 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGIPGIGRKSATRKSKGAK---GKSGKKSKKGTRGP 470
V+EVNQLVERFFEA+KMM M G G+ G +SAT+K K + K++ RGP
Sbjct 421 VAEVNQLVERFFEAKKMMGKMAGQFGMGG---RSATKKVKNHRKGKKGKKGKNRNMRRGP 477
Query 471 TPPKVKSPFGVPGMPGLAGLPGGLPDLSQMPKGLDELPPGLADFDLSKLKFPGKK 525
+ G+P MPG+ G+ GG+P ++++ K ++LPPG + DLSK+KFP K
Sbjct 478 -----QGMPGMPNMPGMPGMGGGMPSMAELEKMQEQLPPGFENIDLSKMKFPKGK 527
>gi|227504770|ref|ZP_03934819.1| signal recognition particle protein [Corynebacterium striatum
ATCC 6940]
gi|227198620|gb|EEI78668.1| signal recognition particle protein [Corynebacterium striatum
ATCC 6940]
Length=541
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/457 (76%), Positives = 384/457 (85%), Gaps = 9/457 (1%)
Query 1 VFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
+FESLSDRL AL GLRGKG+LT+ADI+AT REIRLALLEADVSL VVRAFI RIKERA
Sbjct 1 MFESLSDRLQTALSGLRGKGKLTEADINATAREIRLALLEADVSLTVVRAFIKRIKERAA 60
Query 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
GAEVS ALNPAQQV+KIVNEEL+ ILGGETR L FAK PPTV+MLAGLQG+GKTTLAGKL
Sbjct 61 GAEVSEALNPAQQVIKIVNEELVDILGGETRRLQFAKNPPTVIMLAGLQGAGKTTLAGKL 120
Query 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPES-------GPGD 173
A L QGHTP+LVACDLQRP AV QLQ+VGERA V VFAP PG S +S GD
Sbjct 121 AKHLSKQGHTPMLVACDLQRPGAVQQLQIVGERAEVAVFAPDPGTSIDSHEHEMGTSHGD 180
Query 174 PVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQ 233
PVAVA AG+ EA+ D+VI+DTAGRLGIDE LM QA IRDA+NPDEVLFV+D+MIGQ
Sbjct 181 PVAVAQAGIEEAKRSQHDIVIIDTAGRLGIDETLMTQARNIRDAVNPDEVLFVIDSMIGQ 240
Query 234 DAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP 293
DAV TA AF +GV FTGV LTKLDGDARGGAALS+REVTG PI+FASTGEKL+DFDVFHP
Sbjct 241 DAVQTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGKPIMFASTGEKLQDFDVFHP 300
Query 294 DRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIG 353
+RMASRILGMGD+LSLIEQAE D Q+AEEAAAK+G GELTL DFL+QML +R+MGPIG
Sbjct 301 ERMASRILGMGDLLSLIEQAEATLDHQKAEEAAAKLGTGELTLNDFLDQMLMIRRMGPIG 360
Query 354 NLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINASRRLRIANGSGVT 413
NLL M+PG QM VD+KQLDR+QAIIRGMTPQER +PKI+NASRR RIANGSGV+
Sbjct 361 NLLKMMPGGKQMNQMAEMVDEKQLDRIQAIIRGMTPQERENPKILNASRRKRIANGSGVS 420
Query 414 VSEVNQLVERFFEARKMMSSMLGGMGI-PGIGRKSAT 449
VSEVNQL+ERF EA+KMMS M G G+ PG+GR SAT
Sbjct 421 VSEVNQLIERFNEAKKMMSKMAGQFGMGPGMGR-SAT 456
Lambda K H
0.317 0.135 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1153213694076
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40