BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2919c
Length=112
Score E
Sequences producing significant alignments: (Bits) Value
gi|300193203|pdb|3LF0|A Chain A, Crystal Structure Of The Atp Bo... 219 1e-55
gi|15610056|ref|NP_217435.1| nitrogen regulatory protein P-II GL... 219 1e-55
gi|171849064|pdb|3BZQ|A Chain A, High Resolution Crystal Structu... 219 1e-55
gi|167969547|ref|ZP_02551824.1| nitrogen regulatory protein P-II... 218 2e-55
gi|41409085|ref|NP_961921.1| GlnB [Mycobacterium avium subsp. pa... 214 3e-54
gi|183981801|ref|YP_001850092.1| nitrogen regulatory protein P-I... 214 3e-54
gi|118617611|ref|YP_905943.1| nitrogen regulatory protein P-II G... 212 2e-53
gi|336459101|gb|EGO38050.1| nitrogen regulatory protein PII [Myc... 211 2e-53
gi|108798925|ref|YP_639122.1| nitrogen regulatory protein P-II [... 200 5e-50
gi|256379927|ref|YP_003103587.1| nitrogen regulatory protein P-I... 198 2e-49
gi|240169626|ref|ZP_04748285.1| nitrogen regulatory protein P-II... 192 1e-47
gi|296394651|ref|YP_003659535.1| nitrogen regulatory protein P-I... 190 5e-47
gi|317506052|ref|ZP_07963881.1| nitrogen regulatory protein P-II... 189 2e-46
gi|331698515|ref|YP_004334754.1| nitrogen regulatory protein P-I... 185 2e-45
gi|296171449|ref|ZP_06852735.1| ribosomal protein L11 methyltran... 184 3e-45
gi|300783861|ref|YP_003764152.1| nitrogen regulatory protein P-I... 183 7e-45
gi|118470899|ref|YP_886766.1| nitrogen regulatory protein P-II [... 179 1e-43
gi|169630320|ref|YP_001703969.1| nitrogen regulatory protein P-I... 178 3e-43
gi|343925319|ref|ZP_08764844.1| nitrogen regulatory protein PII ... 177 6e-43
gi|54026134|ref|YP_120376.1| putative nitrogen regulatory protei... 174 4e-42
gi|319951002|ref|ZP_08024872.1| nitrogen regulatory protein P-II... 174 5e-42
gi|297199569|ref|ZP_06916966.1| nitrogen regulatory protein P-II... 171 2e-41
gi|302551318|ref|ZP_07303660.1| nitrogen regulatory protein P-II... 171 4e-41
gi|333919228|ref|YP_004492809.1| nitrogen regulatory protein P-I... 171 4e-41
gi|192361217|ref|YP_001983844.1| Nitrogen regulatory protein P-I... 169 8e-41
gi|25028523|ref|NP_738577.1| nitrogen regulatory protein PII [Co... 169 9e-41
gi|29832136|ref|NP_826770.1| nitrogen regulatory protein P-II [S... 169 1e-40
gi|117928772|ref|YP_873323.1| nitrogen regulatory protein P-II [... 169 1e-40
gi|290960555|ref|YP_003491737.1| nitrogen regulatory protein P-I... 169 2e-40
gi|284992397|ref|YP_003410951.1| nitrogen regulatory protein P-I... 169 2e-40
gi|336176219|ref|YP_004581594.1| nitrogen regulatory protein P-I... 168 3e-40
gi|302525163|ref|ZP_07277505.1| nitrogen regulatory protein P-II... 167 4e-40
gi|145296024|ref|YP_001138845.1| hypothetical protein cgR_1947 [... 167 4e-40
gi|302545819|ref|ZP_07298161.1| nitrogen regulatory protein P-II... 167 4e-40
gi|320007538|gb|ADW02388.1| nitrogen regulatory protein P-II [St... 167 4e-40
gi|311895743|dbj|BAJ28151.1| putative nitrogen regulatory protei... 167 5e-40
gi|337291055|ref|YP_004630076.1| nitrogen regulatory protein P-I... 167 5e-40
gi|19553261|ref|NP_601263.1| nitrogen regulatory protein PII [Co... 167 5e-40
gi|325001375|ref|ZP_08122487.1| nitrogen regulatory protein P-II... 167 6e-40
gi|302865878|ref|YP_003834515.1| nitrogen regulatory protein P-I... 167 7e-40
gi|296139326|ref|YP_003646569.1| nitrogen regulatory protein P-I... 166 8e-40
gi|324997924|ref|ZP_08119036.1| nitrogen regulatory protein P-II... 166 8e-40
gi|300858749|ref|YP_003783732.1| nitrogen regulatory protein P-I... 166 9e-40
gi|159036834|ref|YP_001536087.1| nitrogen regulatory protein P-I... 165 2e-39
gi|331005640|ref|ZP_08329009.1| Nitrogen regulatory protein P-II... 165 2e-39
gi|237785771|ref|YP_002906476.1| nitrogen regulatory protein P-I... 165 2e-39
gi|38234112|ref|NP_939879.1| nitrogen regulatory protein [Coryne... 164 4e-39
gi|271963323|ref|YP_003337519.1| nitrogen regulatory protein P-I... 164 4e-39
gi|238063295|ref|ZP_04608004.1| nitrogen regulatory protein P-II... 164 5e-39
gi|134102498|ref|YP_001108159.1| nitrogen regulatory protein PII... 164 6e-39
>gi|300193203|pdb|3LF0|A Chain A, Crystal Structure Of The Atp Bound Mycobacterium Tuberculosis
Nitrogen Regulatory Pii Protein
gi|300193204|pdb|3LF0|B Chain B, Crystal Structure Of The Atp Bound Mycobacterium Tuberculosis
Nitrogen Regulatory Pii Protein
gi|300193205|pdb|3LF0|C Chain C, Crystal Structure Of The Atp Bound Mycobacterium Tuberculosis
Nitrogen Regulatory Pii Protein
Length=114
Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 3 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 62
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
Sbjct 63 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 114
>gi|15610056|ref|NP_217435.1| nitrogen regulatory protein P-II GLNB [Mycobacterium tuberculosis
H37Rv]
gi|15842462|ref|NP_337499.1| nitrogen regulatory protein P-II [Mycobacterium tuberculosis
CDC1551]
gi|31794095|ref|NP_856588.1| nitrogen regulatory protein P-II GLNB [Mycobacterium bovis AF2122/97]
80 more sequence titles
Length=112
Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
Sbjct 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
>gi|171849064|pdb|3BZQ|A Chain A, High Resolution Crystal Structure Of Nitrogen Regulatory
Protein (Rv2919c) Of Mycobacterium Tuberculosis
Length=114
Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 3 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 62
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
Sbjct 63 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 114
>gi|167969547|ref|ZP_02551824.1| nitrogen regulatory protein P-II glnB [Mycobacterium tuberculosis
H37Ra]
Length=112
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/112 (99%), Positives = 112/112 (100%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDDSIVDKVVDSIVRAARTGKIGDG+VWVSPVDTIVRVRTGERGHDAL
Sbjct 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGRVWVSPVDTIVRVRTGERGHDAL 112
>gi|41409085|ref|NP_961921.1| GlnB [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118462409|ref|YP_882946.1| nitrogen regulatory protein P-II [Mycobacterium avium 104]
gi|254776219|ref|ZP_05217735.1| nitrogen regulatory protein P-II [Mycobacterium avium subsp.
avium ATCC 25291]
gi|254821187|ref|ZP_05226188.1| nitrogen regulatory protein P-II [Mycobacterium intracellulare
ATCC 13950]
gi|342858229|ref|ZP_08714884.1| nitrogen regulatory protein P-II [Mycobacterium colombiense CECT
3035]
gi|41397444|gb|AAS05304.1| GlnB [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118163696|gb|ABK64593.1| nitrogen regulatory protein P-II [Mycobacterium avium 104]
gi|342133933|gb|EGT87113.1| nitrogen regulatory protein P-II [Mycobacterium colombiense CECT
3035]
Length=112
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/112 (99%), Positives = 111/112 (99%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPV+TIVRVRTGERG DAL
Sbjct 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVETIVRVRTGERGTDAL 112
>gi|183981801|ref|YP_001850092.1| nitrogen regulatory protein P-II GlnB [Mycobacterium marinum
M]
gi|183175127|gb|ACC40237.1| nitrogen regulatory protein P-II GlnB [Mycobacterium marinum
M]
Length=112
Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/112 (99%), Positives = 111/112 (99%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDVKTSLE+AGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLITAIVKPFTLDDVKTSLEEAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERG DAL
Sbjct 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGPDAL 112
>gi|118617611|ref|YP_905943.1| nitrogen regulatory protein P-II GlnB [Mycobacterium ulcerans
Agy99]
gi|118569721|gb|ABL04472.1| nitrogen regulatory protein P-II GlnB [Mycobacterium ulcerans
Agy99]
Length=112
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/112 (98%), Positives = 110/112 (99%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDVKTSLE+AGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLITAIVKPFTLDDVKTSLEEAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDDSIVDKVVDSIVR ARTGKIGDGKVWVSPVDTIVRVRTGERG DAL
Sbjct 61 IEVVVDDSIVDKVVDSIVRVARTGKIGDGKVWVSPVDTIVRVRTGERGPDAL 112
>gi|336459101|gb|EGO38050.1| nitrogen regulatory protein PII [Mycobacterium avium subsp. paratuberculosis
S397]
Length=112
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/112 (98%), Positives = 110/112 (99%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPV+TIVRVRTGE G DAL
Sbjct 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVETIVRVRTGEGGTDAL 112
>gi|108798925|ref|YP_639122.1| nitrogen regulatory protein P-II [Mycobacterium sp. MCS]
gi|119868040|ref|YP_937992.1| nitrogen regulatory protein P-II [Mycobacterium sp. KMS]
gi|126434525|ref|YP_001070216.1| nitrogen regulatory protein P-II [Mycobacterium sp. JLS]
gi|108769344|gb|ABG08066.1| nitrogen regulatory protein P-II [Mycobacterium sp. MCS]
gi|119694129|gb|ABL91202.1| nitrogen regulatory protein P-II [Mycobacterium sp. KMS]
gi|126234325|gb|ABN97725.1| nitrogen regulatory protein P-II [Mycobacterium sp. JLS]
Length=112
Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/112 (89%), Positives = 106/112 (95%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTL+DVKT LE G+LGMTVSE+QGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLITAIVKPFTLEDVKTGLEQTGILGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EV+VDDS VDKVVD IV+AARTGKIGDGKVWVSPVDT+VRVRTGERG DAL
Sbjct 61 VEVIVDDSAVDKVVDVIVQAARTGKIGDGKVWVSPVDTVVRVRTGERGADAL 112
>gi|256379927|ref|YP_003103587.1| nitrogen regulatory protein P-II [Actinosynnema mirum DSM 43827]
gi|255924230|gb|ACU39741.1| nitrogen regulatory protein P-II [Actinosynnema mirum DSM 43827]
Length=112
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/112 (86%), Positives = 107/112 (96%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDVKTSLE GVLGMTVSE+QGYGRQKGHTEVYRGAEY+VDFVPK+R
Sbjct 1 MKLITAIVKPFTLDDVKTSLEQLGVLGMTVSEVQGYGRQKGHTEVYRGAEYAVDFVPKLR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEV+VDD+ VDKV+D++V AARTGKIGDGKVWV+PVDT++RVRTGERG DAL
Sbjct 61 IEVLVDDAAVDKVLDAVVEAARTGKIGDGKVWVTPVDTVIRVRTGERGTDAL 112
>gi|240169626|ref|ZP_04748285.1| nitrogen regulatory protein P-II GlnB [Mycobacterium kansasii
ATCC 12478]
Length=112
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/112 (98%), Positives = 110/112 (99%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDVK SLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLITAIVKPFTLDDVKASLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERG DAL
Sbjct 61 VEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGPDAL 112
>gi|296394651|ref|YP_003659535.1| nitrogen regulatory protein P-II [Segniliparus rotundus DSM 44985]
gi|296181798|gb|ADG98704.1| nitrogen regulatory protein P-II [Segniliparus rotundus DSM 44985]
Length=112
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/112 (82%), Positives = 104/112 (93%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPFTL+DVKT+LE +GV+GMTVSE+QGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLVTAIVKPFTLEDVKTALEQSGVVGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EV+VDDS D+V IV AARTGKIGDGKVW+SPV+++VRVRTGERG DAL
Sbjct 61 VEVIVDDSAADQVAQVIVDAARTGKIGDGKVWISPVESVVRVRTGERGSDAL 112
>gi|317506052|ref|ZP_07963881.1| nitrogen regulatory protein P-II [Segniliparus rugosus ATCC BAA-974]
gi|316255656|gb|EFV14897.1| nitrogen regulatory protein P-II [Segniliparus rugosus ATCC BAA-974]
Length=112
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/112 (81%), Positives = 104/112 (93%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPFTL+DVKT+LE +GV+GMTVSE+QGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLVTAIVKPFTLEDVKTALEQSGVVGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EV+VDDS D+V IV AARTGKIGDGKVW++PV+++VRVRTGERG DAL
Sbjct 61 VEVIVDDSAADQVAQVIVDAARTGKIGDGKVWITPVESVVRVRTGERGTDAL 112
>gi|331698515|ref|YP_004334754.1| nitrogen regulatory protein P-II [Pseudonocardia dioxanivorans
CB1190]
gi|326953204|gb|AEA26901.1| nitrogen regulatory protein P-II [Pseudonocardia dioxanivorans
CB1190]
Length=112
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/112 (77%), Positives = 103/112 (92%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAI+KPF L+DVK +LE GVLGMTVSE+QGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLVTAIIKPFVLEDVKGALEQIGVLGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EVV DD++ +KVVD+++ +ARTGKIGDGKVW +PV++IVRVRTGERG DA+
Sbjct 61 VEVVADDALAEKVVDAVIESARTGKIGDGKVWTTPVESIVRVRTGERGADAI 112
>gi|296171449|ref|ZP_06852735.1| ribosomal protein L11 methyltransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894135|gb|EFG73895.1| ribosomal protein L11 methyltransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=112
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/112 (96%), Positives = 111/112 (99%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLVTAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDDS+VDKVVDSIVRAARTGKIGDGKVWV+PV+TIVRVRTGERG DAL
Sbjct 61 IEVVVDDSVVDKVVDSIVRAARTGKIGDGKVWVTPVETIVRVRTGERGTDAL 112
>gi|300783861|ref|YP_003764152.1| nitrogen regulatory protein P-II [Amycolatopsis mediterranei
U32]
gi|299793375|gb|ADJ43750.1| nitrogen regulatory protein P-II [Amycolatopsis mediterranei
U32]
gi|340525255|gb|AEK40460.1| nitrogen regulatory protein P-II [Amycolatopsis mediterranei
S699]
Length=112
Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 87/112 (78%), Positives = 103/112 (92%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDV+++LE GVLGMTVSE+QGYGRQKGHTEVYRGAEYSVDFV K++
Sbjct 1 MKLITAIVKPFTLDDVRSALEQLGVLGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVAKLK 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EVV DD+ V+KV+++I AA TGKIGDGKVWV+PV+T++RVRTGERG DAL
Sbjct 61 VEVVTDDTNVEKVLEAITTAAHTGKIGDGKVWVTPVETVIRVRTGERGTDAL 112
>gi|118470899|ref|YP_886766.1| nitrogen regulatory protein P-II [Mycobacterium smegmatis str.
MC2 155]
gi|118172186|gb|ABK73082.1| nitrogen regulatory protein P-II [Mycobacterium smegmatis str.
MC2 155]
Length=112
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/112 (89%), Positives = 106/112 (95%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTL+DVKT LE G+LGMTVSE+QGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLITAIVKPFTLEDVKTGLEQTGILGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EVVVDDS VDKVVD IV+AARTGKIGDGKVWVSPV+T+VRVRTGERG DAL
Sbjct 61 VEVVVDDSAVDKVVDVIVQAARTGKIGDGKVWVSPVETVVRVRTGERGADAL 112
>gi|169630320|ref|YP_001703969.1| nitrogen regulatory protein P-II [Mycobacterium abscessus ATCC
19977]
gi|169242287|emb|CAM63315.1| Probable nitrogen regulatory protein P-II [Mycobacterium abscessus]
Length=112
Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/112 (88%), Positives = 106/112 (95%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPFTL+DVKT LE AG+LGMTVSE+QGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLVTAIVKPFTLEDVKTGLEQAGILGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EVVVDDS VDKVV+ IV AARTGKIGDGKVWVSPVD++VRVRTGERG DAL
Sbjct 61 VEVVVDDSAVDKVVEVIVTAARTGKIGDGKVWVSPVDSVVRVRTGERGADAL 112
>gi|343925319|ref|ZP_08764844.1| nitrogen regulatory protein PII [Gordonia alkanivorans NBRC 16433]
gi|343764758|dbj|GAA11770.1| nitrogen regulatory protein PII [Gordonia alkanivorans NBRC 16433]
Length=112
Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/112 (88%), Positives = 105/112 (94%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTL+DVK LE AG+LGMTVSE+QGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLITAIVKPFTLEDVKAGLEQAGILGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EVVVDDS VDKVVD IV AARTGKIGDGKVWVSPV+++VRVRTGERG DAL
Sbjct 61 VEVVVDDSAVDKVVDVIVEAARTGKIGDGKVWVSPVESVVRVRTGERGGDAL 112
>gi|54026134|ref|YP_120376.1| putative nitrogen regulatory protein P-II [Nocardia farcinica
IFM 10152]
gi|54017642|dbj|BAD59012.1| putative nitrogen regulatory protein P-II [Nocardia farcinica
IFM 10152]
Length=112
Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/112 (86%), Positives = 105/112 (94%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTL+DVKT LE AGV GMTVSE+QGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLITAIVKPFTLEDVKTGLEQAGVFGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EVVVDD+ VDKVVD IV A+RTGKIGDGKVWV+PV++I+RVRTGERG DAL
Sbjct 61 VEVVVDDASVDKVVDVIVEASRTGKIGDGKVWVTPVESIIRVRTGERGTDAL 112
>gi|319951002|ref|ZP_08024872.1| nitrogen regulatory protein P-II [Dietzia cinnamea P4]
gi|319435345|gb|EFV90595.1| nitrogen regulatory protein P-II [Dietzia cinnamea P4]
Length=112
Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/112 (76%), Positives = 98/112 (88%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPFTLDDVK +LE AG+ G+T+SE+QGYGRQKGHTEVYRGAEY+VDFVPK+R
Sbjct 1 MKLVTAIVKPFTLDDVKAALEQAGIHGLTISEVQGYGRQKGHTEVYRGAEYAVDFVPKIR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EVVVDD VV IV AARTGKIGDGKVWV+ V++IVRVRTGE G DA+
Sbjct 61 VEVVVDDDTAGTVVQLIVDAARTGKIGDGKVWVTAVESIVRVRTGEEGVDAI 112
>gi|297199569|ref|ZP_06916966.1| nitrogen regulatory protein P-II [Streptomyces sviceus ATCC 29083]
gi|197713503|gb|EDY57537.1| nitrogen regulatory protein P-II [Streptomyces sviceus ATCC 29083]
Length=112
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/112 (75%), Positives = 98/112 (88%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKP+ LD+VKT+L++ GV G+T +E GYGRQ+GHTEVYRGAEY VD VPKVR
Sbjct 1 MKLITAIVKPYRLDEVKTALQEIGVHGLTATEASGYGRQRGHTEVYRGAEYRVDLVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDD+ D V+D+IV+AARTGKIGDGKVW PV+T+VRVRTGERG DAL
Sbjct 61 IEVVVDDADADMVIDTIVKAARTGKIGDGKVWALPVETVVRVRTGERGPDAL 112
>gi|302551318|ref|ZP_07303660.1| nitrogen regulatory protein P-II [Streptomyces viridochromogenes
DSM 40736]
gi|302468936|gb|EFL32029.1| nitrogen regulatory protein P-II [Streptomyces viridochromogenes
DSM 40736]
Length=112
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/112 (73%), Positives = 98/112 (88%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKP+ LD+VK +L++ G+ G+TVSE GYGRQ+GHTEVYRGAEY VD VPKVR
Sbjct 1 MKLITAIVKPYRLDEVKNALQELGIQGLTVSEASGYGRQRGHTEVYRGAEYQVDLVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVV+D+ + V+D++V+AA+TGKIGDGKVW PVDT+VRVRTGERG DAL
Sbjct 61 IEVVVEDADAEAVIDAVVKAAQTGKIGDGKVWALPVDTVVRVRTGERGPDAL 112
>gi|333919228|ref|YP_004492809.1| nitrogen regulatory protein P-II [Amycolicicoccus subflavus DQS3-9A1]
gi|333481449|gb|AEF40009.1| Nitrogen regulatory protein P-II [Amycolicicoccus subflavus DQS3-9A1]
Length=112
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/112 (83%), Positives = 105/112 (94%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPFTL+DVK+ LE AGVLGMTVSE+QGYGRQKGHTEVYRGAEYSVDFVPKV+
Sbjct 1 MKLVTAIVKPFTLEDVKSGLEQAGVLGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVPKVK 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EVVVD+S VDKVVD IV A+RTGKIGDGKVWV+ VD+++RVRTGERG DA+
Sbjct 61 VEVVVDESAVDKVVDVIVEASRTGKIGDGKVWVTSVDSVIRVRTGERGTDAI 112
>gi|192361217|ref|YP_001983844.1| Nitrogen regulatory protein P-II [Cellvibrio japonicus Ueda107]
gi|190687382|gb|ACE85060.1| Nitrogen regulatory protein P-II [Cellvibrio japonicus Ueda107]
Length=112
Score = 169 bits (429), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 76/112 (68%), Positives = 101/112 (91%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITA+VKPF LDDV+T+L D GV GMTV+E++G+GRQKGHTE+YRGAEY VDF+PKV+
Sbjct 1 MKLITAVVKPFKLDDVRTALSDVGVQGMTVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IE+ VDDS+V++ V++I +AA+TGKIGDGK+++SP+D I+R+RTGE G DA+
Sbjct 61 IELAVDDSMVEQAVEAITKAAQTGKIGDGKIFISPLDEIIRIRTGETGSDAV 112
>gi|25028523|ref|NP_738577.1| nitrogen regulatory protein PII [Corynebacterium efficiens YS-314]
gi|259507577|ref|ZP_05750477.1| nitrogen regulatory protein P-II [Corynebacterium efficiens YS-314]
gi|23493808|dbj|BAC18777.1| nitrogen regulatory protein PII [Corynebacterium efficiens YS-314]
gi|259164851|gb|EEW49405.1| nitrogen regulatory protein P-II [Corynebacterium efficiens YS-314]
Length=112
Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/112 (73%), Positives = 99/112 (89%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTL DVK +LE GV GMTV+E QG+G+QKGHTEVYRGAEY+VDFVPK++
Sbjct 1 MKLITAIVKPFTLTDVKEALEQVGVQGMTVTETQGFGQQKGHTEVYRGAEYAVDFVPKIK 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVV D+ +D+VV++IV ARTGK+GDGKVWV+ V+ ++RVRTGERG +AL
Sbjct 61 IEVVVSDAQLDEVVEAIVTTARTGKMGDGKVWVTHVEELIRVRTGERGDEAL 112
>gi|29832136|ref|NP_826770.1| nitrogen regulatory protein P-II [Streptomyces avermitilis MA-4680]
gi|29609254|dbj|BAC73305.1| putative nitrogen regulatory protein P-II [Streptomyces avermitilis
MA-4680]
Length=112
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/112 (75%), Positives = 99/112 (89%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKP+ LD+VKT+L++ GV G+TV+E GYGRQ+GHTEVYRGAEY VD VPKVR
Sbjct 1 MKLITAIVKPYRLDEVKTALQELGVHGLTVTEASGYGRQRGHTEVYRGAEYRVDLVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVV+D+ D V+D+IV+AA+TGKIGDGKVW PV+T+VRVRTGERG DAL
Sbjct 61 IEVVVEDADSDAVIDAIVKAAQTGKIGDGKVWSVPVETVVRVRTGERGPDAL 112
>gi|117928772|ref|YP_873323.1| nitrogen regulatory protein P-II [Acidothermus cellulolyticus
11B]
gi|117649235|gb|ABK53337.1| nitrogen regulatory protein P-II [Acidothermus cellulolyticus
11B]
Length=112
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/112 (76%), Positives = 96/112 (86%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITA+VKPF LDDVKT+LE GV GMTVSE GYGRQ+GHTEVYRGAEY VD VPKVR
Sbjct 1 MKLITAVVKPFKLDDVKTALEAFGVTGMTVSEASGYGRQRGHTEVYRGAEYEVDLVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEV+VDD+ + V+D IV+AA+TGKIGDGKVW PV+T+VRVRTGERG AL
Sbjct 61 IEVLVDDADAEDVIDVIVKAAQTGKIGDGKVWSIPVETVVRVRTGERGVAAL 112
>gi|290960555|ref|YP_003491737.1| nitrogen regulatory protein P-II [Streptomyces scabiei 87.22]
gi|260650081|emb|CBG73197.1| putative nitrogen regulatory protein P-II [Streptomyces scabiei
87.22]
Length=112
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/112 (74%), Positives = 97/112 (87%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
M+LITAIVKP+ LD VKT+L++ GV G+TVSE GYGRQ+GHTEVYRGAEY VD VPKVR
Sbjct 1 MRLITAIVKPYRLDAVKTALQEMGVHGLTVSEASGYGRQRGHTEVYRGAEYQVDLVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IE+VV+D+ D V+D+IV+AA TGKIGDGKVW PV+T+VRVRTGERG DAL
Sbjct 61 IEIVVEDADSDAVIDAIVKAAHTGKIGDGKVWALPVETVVRVRTGERGPDAL 112
>gi|284992397|ref|YP_003410951.1| nitrogen regulatory protein P-II [Geodermatophilus obscurus DSM
43160]
gi|284065642|gb|ADB76580.1| nitrogen regulatory protein P-II [Geodermatophilus obscurus DSM
43160]
Length=112
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/112 (75%), Positives = 96/112 (86%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPF LDDVK +LE G+ G+TVSE+QG+GRQ+GHTEVYRGAEY VDFVPKVR
Sbjct 1 MKLVTAIVKPFKLDDVKNALELIGIAGLTVSEVQGFGRQRGHTEVYRGAEYQVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVV + +VVD+IV AA TG+IGDGKVWV+ +D IVRVRTGERG DAL
Sbjct 61 IEVVVGEIEAARVVDAIVEAASTGQIGDGKVWVTTIDEIVRVRTGERGADAL 112
>gi|336176219|ref|YP_004581594.1| nitrogen regulatory protein P-II [Frankia symbiont of Datisca
glomerata]
gi|334857199|gb|AEH07673.1| nitrogen regulatory protein P-II [Frankia symbiont of Datisca
glomerata]
Length=114
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 74/112 (67%), Positives = 101/112 (91%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
+KL+TA++KPF L+DVKT+LE+ G+ G+T+SE+QG+GRQKGHTEVYRGAEY VDFVPK++
Sbjct 3 VKLVTAVIKPFRLEDVKTALENLGIHGLTISEVQGFGRQKGHTEVYRGAEYKVDFVPKIK 62
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IE++V+D V+++V +I +A+TGKIGDGK+WV PV+T++RVRTGERG DAL
Sbjct 63 IEILVEDDAVEELVTAITTSAQTGKIGDGKIWVVPVETVLRVRTGERGSDAL 114
>gi|302525163|ref|ZP_07277505.1| nitrogen regulatory protein P-II [Streptomyces sp. AA4]
gi|302434058|gb|EFL05874.1| nitrogen regulatory protein P-II [Streptomyces sp. AA4]
Length=112
Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/112 (81%), Positives = 104/112 (93%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTLDDV++SLE GVLGMTVSE+QGYGRQKGHTEVYRGAEYSVDFV K++
Sbjct 1 MKLITAIVKPFTLDDVRSSLEQLGVLGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVAKLK 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDD +V+KV+D++ AA TGKIGDGKVWV+PV+T++RVRTGERG DAL
Sbjct 61 IEVVVDDVVVEKVLDAVTSAAHTGKIGDGKVWVTPVETVIRVRTGERGTDAL 112
>gi|145296024|ref|YP_001138845.1| hypothetical protein cgR_1947 [Corynebacterium glutamicum R]
gi|140845944|dbj|BAF54943.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044734|gb|EGV40409.1| hypothetical protein CgS9114_07496 [Corynebacterium glutamicum
S9114]
Length=112
Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/112 (72%), Positives = 97/112 (87%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTL D+K +LE AGV GMTV+E QG+G+QKGHTEVYRGAEY+VDFVPKV+
Sbjct 1 MKLITAIVKPFTLTDIKDALEQAGVQGMTVTETQGFGQQKGHTEVYRGAEYAVDFVPKVK 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEV+V D+ ++V+ +IV ARTGK+GDGKVW++ VD +VRVRTGERG AL
Sbjct 61 IEVIVADAQAEEVITAIVDTARTGKVGDGKVWMTTVDELVRVRTGERGEAAL 112
>gi|302545819|ref|ZP_07298161.1| nitrogen regulatory protein P-II [Streptomyces hygroscopicus
ATCC 53653]
gi|302463437|gb|EFL26530.1| nitrogen regulatory protein P-II [Streptomyces himastatinicus
ATCC 53653]
Length=112
Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/112 (74%), Positives = 95/112 (85%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPF LDDVKT+L + GV G+TV+E G+GRQ+GHTEVYRGAEY +DFVPK R
Sbjct 1 MKLITAIVKPFKLDDVKTALLEIGVQGLTVTEASGFGRQRGHTEVYRGAEYRIDFVPKAR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVV+D+ D V+D+IV AARTG+IGDGKVW PVD VRVRTGERG DA+
Sbjct 61 IEVVVEDAEADAVMDAIVNAARTGRIGDGKVWAVPVDDFVRVRTGERGPDAV 112
>gi|320007538|gb|ADW02388.1| nitrogen regulatory protein P-II [Streptomyces flavogriseus ATCC
33331]
Length=112
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/112 (72%), Positives = 97/112 (87%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITA+VKP LD+VKT+L++ GV GMTV+E GYGRQ GHTEVYRGAEY VD VPK+R
Sbjct 1 MKLITAVVKPHRLDEVKTALQELGVNGMTVTEASGYGRQHGHTEVYRGAEYRVDLVPKIR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EV+V+D+ + V+D++VRAARTGKIGDGKVW PV+T+VRVRTGERG DAL
Sbjct 61 MEVLVEDADAEAVLDAVVRAARTGKIGDGKVWAVPVETVVRVRTGERGPDAL 112
>gi|311895743|dbj|BAJ28151.1| putative nitrogen regulatory protein P-II [Kitasatospora setae
KM-6054]
Length=112
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/112 (75%), Positives = 96/112 (86%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITA+VKPF LD+VKT+L++ GV G+TV+E GYGRQ GHTEVYRGAEY +D VPKVR
Sbjct 1 MKLITAVVKPFKLDEVKTALQELGVHGLTVTEASGYGRQHGHTEVYRGAEYRIDLVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVV+D ++V D+IV AARTGKIGDGKVWV PVD IVRVRTGERG DA+
Sbjct 61 IEVVVEDEDAERVTDAIVAAARTGKIGDGKVWVVPVDGIVRVRTGERGPDAV 112
>gi|337291055|ref|YP_004630076.1| nitrogen regulatory protein P-II [Corynebacterium ulcerans BR-AD22]
gi|334697168|gb|AEG81965.1| nitrogen regulatory protein P-II [Corynebacterium ulcerans 809]
gi|334699361|gb|AEG84157.1| nitrogen regulatory protein P-II [Corynebacterium ulcerans BR-AD22]
Length=112
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/112 (71%), Positives = 98/112 (88%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPFTL D+K +L GV GMTV+E QG+G+QKGHTEVYRGAEY+VDFVPKV+
Sbjct 1 MKLVTAIVKPFTLTDIKDALGQVGVHGMTVTETQGFGQQKGHTEVYRGAEYAVDFVPKVK 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IE+V+DD ++D VV ++V +A TGKIGDGKVWV+PVD ++RVRTGERG DA+
Sbjct 61 IEIVIDDELLDDVVRAVVDSAHTGKIGDGKVWVTPVDDLIRVRTGERGSDAI 112
>gi|19553261|ref|NP_601263.1| nitrogen regulatory protein PII [Corynebacterium glutamicum ATCC
13032]
gi|62390897|ref|YP_226299.1| nitrogen regulatory protein PII [Corynebacterium glutamicum ATCC
13032]
gi|4538525|emb|CAB39373.1| PII protein [Corynebacterium glutamicum]
gi|21324830|dbj|BAB99453.1| Nitrogen regulatory protein PII [Corynebacterium glutamicum ATCC
13032]
gi|41326236|emb|CAF20398.1| Nitrogen regulatory protein PII [Corynebacterium glutamicum ATCC
13032]
Length=112
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/112 (69%), Positives = 97/112 (87%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPFTL D+K +LE AGV GMTV+E QG+G+QKGHTEVYRGAEY+VDFVPKV+
Sbjct 1 MKLITAIVKPFTLTDIKDALEQAGVQGMTVTETQGFGQQKGHTEVYRGAEYAVDFVPKVK 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEV++ D+ ++V++ IV ARTGK+GDGKVW++ ++ +VRVRTGERG AL
Sbjct 61 IEVIISDAQAEEVINIIVETARTGKVGDGKVWMTNIEELVRVRTGERGEAAL 112
>gi|325001375|ref|ZP_08122487.1| nitrogen regulatory protein P-II [Pseudonocardia sp. P1]
Length=112
Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/112 (72%), Positives = 96/112 (86%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPF L DV+ +LE GVLGMTV+E+QGYGRQKGHTEVYRGAEY VD VPKVR
Sbjct 1 MKLVTAIVKPFVLADVREALEGIGVLGMTVTEVQGYGRQKGHTEVYRGAEYQVDLVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVV D + D+ + ++V AA TG+IGDGKVW++ V+T+VRVRTGERG DA+
Sbjct 61 IEVVVGDEVADRALQTVVDAAHTGRIGDGKVWLTAVETLVRVRTGERGDDAV 112
>gi|302865878|ref|YP_003834515.1| nitrogen regulatory protein P-II [Micromonospora aurantiaca ATCC
27029]
gi|315502423|ref|YP_004081310.1| nitrogen regulatory protein p-ii [Micromonospora sp. L5]
gi|302568737|gb|ADL44939.1| nitrogen regulatory protein P-II [Micromonospora aurantiaca ATCC
27029]
gi|315409042|gb|ADU07159.1| nitrogen regulatory protein P-II [Micromonospora sp. L5]
Length=112
Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/112 (71%), Positives = 98/112 (88%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TA++KP+ LD VK +L GV G+TVSE+QGYGRQKGHTEVYRGAEY+V+F+PK+R
Sbjct 1 MKLVTAVIKPYQLDAVKEALHALGVAGLTVSEVQGYGRQKGHTEVYRGAEYTVEFLPKIR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EV+ D+ VDK+VD+IV AARTGKIGDGKVWV+ V+ +VRVRTGERG DAL
Sbjct 61 VEVLTDEMDVDKIVDAIVGAARTGKIGDGKVWVTGVEEVVRVRTGERGLDAL 112
>gi|296139326|ref|YP_003646569.1| nitrogen regulatory protein P-II [Tsukamurella paurometabola
DSM 20162]
gi|296027460|gb|ADG78230.1| nitrogen regulatory protein P-II [Tsukamurella paurometabola
DSM 20162]
Length=112
Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/112 (84%), Positives = 103/112 (92%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPFTL+DVK LE AG+LGMTVSE+QGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLVTAIVKPFTLEDVKAGLEQAGILGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVVDD++VD VV IV ARTGKIGDGKVWV+PV+++VRVRTGERG DAL
Sbjct 61 IEVVVDDAVVDSVVQVIVDGARTGKIGDGKVWVTPVESVVRVRTGERGADAL 112
>gi|324997924|ref|ZP_08119036.1| nitrogen regulatory protein P-II [Pseudonocardia sp. P1]
Length=112
Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/112 (80%), Positives = 105/112 (94%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPF L+DVK +LE GVLG+T+SE+QGYGRQKGHTEVYRGAEYSVDFVPKVR
Sbjct 1 MKLVTAIVKPFVLEDVKGALEQIGVLGLTISEVQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EVVVDD+++DKVVD++V AARTGKIGDGKVWV+ V+T+VRVRTGERG DA+
Sbjct 61 VEVVVDDALLDKVVDAVVEAARTGKIGDGKVWVTSVETVVRVRTGERGTDAI 112
>gi|300858749|ref|YP_003783732.1| nitrogen regulatory protein P-II [Corynebacterium pseudotuberculosis
FRC41]
gi|300686203|gb|ADK29125.1| Nitrogen regulatory protein P-II [Corynebacterium pseudotuberculosis
FRC41]
gi|302206456|gb|ADL10798.1| Nitrogen regulatory protein P-II [Corynebacterium pseudotuberculosis
C231]
gi|302331012|gb|ADL21206.1| Nitrogen regulatory protein P-II [Corynebacterium pseudotuberculosis
1002]
gi|308276698|gb|ADO26597.1| nitrogen regulatory protein P-II [Corynebacterium pseudotuberculosis
I19]
gi|341825140|gb|AEK92661.1| Nitrogen regulatory protein P-II [Corynebacterium pseudotuberculosis
PAT10]
Length=112
Score = 166 bits (421), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 78/112 (70%), Positives = 98/112 (88%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPFTL D+K +L GV GMTV+E QG+G+QKGHTEVYRGAEY+VDF+PKV+
Sbjct 1 MKLVTAIVKPFTLTDIKDALGQVGVHGMTVTETQGFGQQKGHTEVYRGAEYAVDFIPKVK 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IE+V+DD ++D VV ++V +A TGKIGDGKVWV+PVD ++RVRTGERG DA+
Sbjct 61 IEIVIDDELLDDVVRAVVDSAHTGKIGDGKVWVTPVDDLIRVRTGERGSDAV 112
>gi|159036834|ref|YP_001536087.1| nitrogen regulatory protein P-II [Salinispora arenicola CNS-205]
gi|157915669|gb|ABV97096.1| nitrogen regulatory protein P-II [Salinispora arenicola CNS-205]
Length=112
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/112 (70%), Positives = 98/112 (88%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TA++KP+ LD VK +L GV G+TVSE+QGYGRQKGHTEVYRGAEY+V+F+PK+R
Sbjct 1 MKLVTAVIKPYQLDAVKEALHALGVAGLTVSEVQGYGRQKGHTEVYRGAEYTVEFLPKIR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EV+ D+ V+KVVD+IV AARTGKIGDGKVWV+ ++ +VRVRTGERG DAL
Sbjct 61 VEVLTDELDVNKVVDAIVAAARTGKIGDGKVWVTGIEDVVRVRTGERGLDAL 112
>gi|331005640|ref|ZP_08329009.1| Nitrogen regulatory protein P-II [gamma proteobacterium IMCC1989]
gi|330420565|gb|EGG94862.1| Nitrogen regulatory protein P-II [gamma proteobacterium IMCC1989]
Length=112
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/112 (67%), Positives = 100/112 (90%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKLITAIVKPF LDDV+ +L + GV GMTV+E++G+GRQKGHTE+YRGAEY VDF+PKV+
Sbjct 1 MKLITAIVKPFKLDDVRAALSEVGVQGMTVTEVKGFGRQKGHTELYRGAEYIVDFLPKVK 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IE+V+DDS+VD+ VD+I +AA+TGKIGDGK++V+ V+ ++R+RTGE G DA+
Sbjct 61 IELVIDDSMVDQSVDAITKAAQTGKIGDGKIFVTAVEEVIRIRTGETGSDAV 112
>gi|237785771|ref|YP_002906476.1| nitrogen regulatory protein P-II [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758683|gb|ACR17933.1| nitrogen regulatory protein P-II [Corynebacterium kroppenstedtii
DSM 44385]
Length=114
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/112 (68%), Positives = 97/112 (87%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
+KL+TAIVKPFTL D+K SLE+ GV GMTV+E+QG+G+QKGHTEVYRGAEY+VDFV K++
Sbjct 3 VKLVTAIVKPFTLTDIKESLENVGVRGMTVTEVQGFGQQKGHTEVYRGAEYAVDFVSKIK 62
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IEVVV D + V+++I+ A+RTGKIGDGK+WV+PVD + RVRT ERG DA+
Sbjct 63 IEVVVSDDLYSDVIEAIISASRTGKIGDGKIWVTPVDDVARVRTAERGEDAV 114
>gi|38234112|ref|NP_939879.1| nitrogen regulatory protein [Corynebacterium diphtheriae NCTC
13129]
gi|38200374|emb|CAE50061.1| Nitrogen regulatory protein [Corynebacterium diphtheriae]
Length=112
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/112 (70%), Positives = 97/112 (87%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIVKPFTL D+K SLE GV GMTV+E QG+G+QKGHTEVYRGAEY+VDFVPK++
Sbjct 1 MKLVTAIVKPFTLTDIKDSLEQVGVHGMTVTESQGFGQQKGHTEVYRGAEYAVDFVPKIK 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
IE+V++D ++D VV +IV +A TGKIGDGKVWV+ VD ++RVRTGERG A+
Sbjct 61 IEIVINDDLLDDVVKAIVDSAHTGKIGDGKVWVTTVDDLIRVRTGERGDSAV 112
>gi|271963323|ref|YP_003337519.1| nitrogen regulatory protein P-II [Streptosporangium roseum DSM
43021]
gi|270506498|gb|ACZ84776.1| nitrogen regulatory protein P-II [Streptosporangium roseum DSM
43021]
Length=112
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/112 (71%), Positives = 94/112 (84%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
M+LITA++KPF LDDVK +LE GV GMTVSE GYGRQ+GHTEVYRGAEY VD VPKVR
Sbjct 1 MRLITAVIKPFKLDDVKAALEQFGVKGMTVSEASGYGRQRGHTEVYRGAEYQVDLVPKVR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EV+ ++ + V+D IV+AA+TGKIGDGKVW PVDT+VRVRTGERG +AL
Sbjct 61 LEVLAEEDDAEDVIDVIVKAAQTGKIGDGKVWSVPVDTVVRVRTGERGPEAL 112
>gi|238063295|ref|ZP_04608004.1| nitrogen regulatory protein P-II [Micromonospora sp. ATCC 39149]
gi|237885106|gb|EEP73934.1| nitrogen regulatory protein P-II [Micromonospora sp. ATCC 39149]
Length=117
Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/112 (70%), Positives = 98/112 (88%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TA++KP+ LD VK +L GV G+TVSE+QGYGRQKGHTEVYRGAEY+V+F+PK+R
Sbjct 6 MKLVTAVIKPYQLDAVKEALHALGVAGLTVSEVQGYGRQKGHTEVYRGAEYTVEFLPKIR 65
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EV+ D+ V+K+VD+IV AARTGKIGDGKVWV+ V+ +VRVRTGERG DAL
Sbjct 66 VEVLTDEIDVEKIVDAIVGAARTGKIGDGKVWVTGVEDVVRVRTGERGLDAL 117
>gi|134102498|ref|YP_001108159.1| nitrogen regulatory protein PII [Saccharopolyspora erythraea
NRRL 2338]
gi|291004111|ref|ZP_06562084.1| nitrogen regulatory protein PII [Saccharopolyspora erythraea
NRRL 2338]
gi|133915121|emb|CAM05234.1| nitrogen regulatory protein PII [Saccharopolyspora erythraea
NRRL 2338]
Length=112
Score = 164 bits (414), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/112 (72%), Positives = 96/112 (86%), Gaps = 0/112 (0%)
Query 1 MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVR 60
MKL+TAIV+P LD++K +L GVLGMTVSE QGYGRQKGH EVYRGAEYSVDF+ K+R
Sbjct 1 MKLVTAIVQPSKLDELKEALGRLGVLGMTVSEAQGYGRQKGHKEVYRGAEYSVDFIEKLR 60
Query 61 IEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL 112
+EV+V+DS VDKVVD IV A RTGK+GDGKVWV+ V+++VRVRTGE G +AL
Sbjct 61 VEVLVEDSTVDKVVDGIVSATRTGKVGDGKVWVTAVESVVRVRTGETGVEAL 112
Lambda K H
0.318 0.138 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128047486336
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40