BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2924c Length=289 Score E Sequences producing significant alignments: (Bits) Value gi|15610061|ref|NP_217440.1| formamidopyrimidine-DNA glycosylase... 585 2e-165 gi|306777215|ref|ZP_07415552.1| formamidopyrimidine-DNA glycosyl... 584 4e-165 gi|339295763|gb|AEJ47874.1| formamidopyrimidine-DNA glycosylase ... 584 6e-165 gi|253797987|ref|YP_003030988.1| formamidopyrimidine-DNA glycosy... 584 6e-165 gi|328457761|gb|AEB03184.1| formamidopyrimidine-DNA glycosylase ... 582 2e-164 gi|294993978|ref|ZP_06799669.1| formamidopyrimidine-DNA glycosyl... 554 5e-156 gi|240169619|ref|ZP_04748278.1| formamidopyrimidine-DNA glycosyl... 500 9e-140 gi|183981796|ref|YP_001850087.1| formamidopyrimidine-DNA glycosy... 496 2e-138 gi|342858222|ref|ZP_08714877.1| formamidopyrimidine/5-formylurac... 496 2e-138 gi|296171391|ref|ZP_06852724.1| DNA-formamidopyrimidine glycosyl... 494 9e-138 gi|118617607|ref|YP_905939.1| formamidopyrimidine-DNA glycosylas... 491 4e-137 gi|118464268|ref|YP_882954.1| formamidopyrimidine-DNA glycosylas... 488 3e-136 gi|41409092|ref|NP_961928.1| formamidopyrimidine-DNA glycosylase... 486 2e-135 gi|254822110|ref|ZP_05227111.1| formamidopyrimidine-DNA glycosyl... 484 8e-135 gi|126434518|ref|YP_001070209.1| formamidopyrimidine-DNA glycosy... 466 2e-129 gi|108798918|ref|YP_639115.1| formamidopyrimidine-DNA glycosylas... 462 3e-128 gi|120403164|ref|YP_952993.1| formamidopyrimidine-DNA glycosylas... 462 3e-128 gi|15827876|ref|NP_302139.1| formamidopyrimidine-DNA glycosylase... 452 2e-125 gi|145224770|ref|YP_001135448.1| formamidopyrimidine-DNA glycosy... 447 1e-123 gi|118470267|ref|YP_886759.1| formamidopyrimidine-DNA glycosylas... 443 1e-122 gi|333991296|ref|YP_004523910.1| formamidopyrimidine-DNA glycosy... 425 4e-117 gi|325675925|ref|ZP_08155608.1| DNA-formamidopyrimidine glycosyl... 381 7e-104 gi|226365984|ref|YP_002783767.1| formamidopyrimidine-DNA glycosy... 374 1e-101 gi|111023482|ref|YP_706454.1| formamidopyrimidine-DNA glycosylas... 372 4e-101 gi|169630336|ref|YP_001703985.1| formamidopyrimidine-DNA glycosy... 371 9e-101 gi|229491415|ref|ZP_04385239.1| formamidopyrimidine-DNA glycosyl... 358 7e-97 gi|296139285|ref|YP_003646528.1| formamidopyrimidine-DNA glycosy... 357 1e-96 gi|226305919|ref|YP_002765879.1| formamidopyrimidine-DNA glycosy... 357 2e-96 gi|54026154|ref|YP_120396.1| formamidopyrimidine-DNA glycosylase... 352 4e-95 gi|343925328|ref|ZP_08764853.1| formamidopyrimidine-DNA glycosyl... 344 8e-93 gi|262202010|ref|YP_003273218.1| formamidopyrimidine-DNA glycosy... 339 2e-91 gi|333920820|ref|YP_004494401.1| fomramidopyrimidine-DNA glycosy... 336 3e-90 gi|300783720|ref|YP_003764011.1| formamidopyrimidine-DNA glycosy... 333 2e-89 gi|256379956|ref|YP_003103616.1| formamidopyrimidine-DNA glycosy... 327 1e-87 gi|302525052|ref|ZP_07277394.1| formamidopyrimidine-DNA glycosyl... 327 2e-87 gi|331698523|ref|YP_004334762.1| formamidopyrimidine-DNA glycosy... 321 7e-86 gi|134102536|ref|YP_001108197.1| formamidopyrimidine-DNA glycosy... 320 2e-85 gi|257055002|ref|YP_003132834.1| formamidopyrimidine-DNA glycosy... 320 2e-85 gi|296393288|ref|YP_003658172.1| formamidopyrimidine-DNA glycosy... 317 2e-84 gi|345009586|ref|YP_004811940.1| Formamidopyrimidine-DNA glycosy... 316 3e-84 gi|326382853|ref|ZP_08204543.1| formamidopyrimidine/5-formylurac... 315 4e-84 gi|294815351|ref|ZP_06773994.1| DNA glycosylase [Streptomyces cl... 315 5e-84 gi|239991060|ref|ZP_04711724.1| formamidopyrimidine-DNA glycosyl... 315 5e-84 gi|311742942|ref|ZP_07716750.1| DNA-formamidopyrimidine glycosyl... 312 3e-83 gi|182435700|ref|YP_001823419.1| formamidopyrimidine-DNA glycosy... 311 6e-83 gi|326776325|ref|ZP_08235590.1| Formamidopyrimidine-DNA glycosyl... 311 8e-83 gi|302554408|ref|ZP_07306750.1| formamidopyrimidine-DNA glycosyl... 307 1e-81 gi|21223929|ref|NP_629708.1| formamidopyrimidine-DNA glycosylase... 307 1e-81 gi|254392459|ref|ZP_05007639.1| formamidopyrimidine-DNA glycosyl... 307 1e-81 gi|329936741|ref|ZP_08286448.1| formamidopyrimidine-DNA glycosyl... 306 2e-81 >gi|15610061|ref|NP_217440.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Rv] gi|15842470|ref|NP_337507.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31794101|ref|NP_856594.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis AF2122/97] 66 more sequence titles Length=289 Score = 585 bits (1509), Expect = 2e-165, Method: Compositional matrix adjust. Identities = 289/289 (100%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG Sbjct 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT Sbjct 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS Sbjct 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN Sbjct 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK Sbjct 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 >gi|306777215|ref|ZP_07415552.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu001] gi|306973332|ref|ZP_07485993.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu010] gi|307081038|ref|ZP_07490208.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu011] gi|308214424|gb|EFO73823.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu001] gi|308357235|gb|EFP46086.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu010] gi|308361244|gb|EFP50095.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu011] Length=289 Score = 584 bits (1506), Expect = 4e-165, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQAH+TGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG Sbjct 1 MPELPEVEVVRRGLQAHMTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT Sbjct 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS Sbjct 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN Sbjct 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK Sbjct 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 >gi|339295763|gb|AEJ47874.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis CCDC5079] gi|339299376|gb|AEJ51486.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis CCDC5180] Length=306 Score = 584 bits (1505), Expect = 6e-165, Method: Compositional matrix adjust. Identities = 289/289 (100%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG Sbjct 18 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 77 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT Sbjct 78 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 137 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS Sbjct 138 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 197 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN Sbjct 198 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 257 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK Sbjct 258 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 306 >gi|253797987|ref|YP_003030988.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 1435] gi|289553286|ref|ZP_06442496.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 605] gi|297635544|ref|ZP_06953324.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] gi|297732543|ref|ZP_06961661.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN R506] gi|313659875|ref|ZP_07816755.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Mycobacterium tuberculosis KZN V2475] gi|253319490|gb|ACT24093.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 1435] gi|289437918|gb|EFD20411.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 605] Length=289 Score = 584 bits (1505), Expect = 6e-165, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG Sbjct 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT Sbjct 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS Sbjct 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN Sbjct 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 GESGYFERSLDAYGR+GENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK Sbjct 241 GESGYFERSLDAYGRDGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 >gi|328457761|gb|AEB03184.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 4207] Length=304 Score = 582 bits (1501), Expect = 2e-164, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG Sbjct 16 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 75 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT Sbjct 76 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 135 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS Sbjct 136 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 195 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN Sbjct 196 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 255 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 GESGYFERSLDAYGR+GENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK Sbjct 256 GESGYFERSLDAYGRDGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 304 >gi|294993978|ref|ZP_06799669.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 210] Length=328 Score = 554 bits (1428), Expect = 5e-156, Method: Compositional matrix adjust. Identities = 276/277 (99%), Positives = 276/277 (99%), Gaps = 0/277 (0%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG Sbjct 16 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 75 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT Sbjct 76 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 135 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS Sbjct 136 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 195 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN Sbjct 196 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 255 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSS 277 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNR S Sbjct 256 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRLS 292 >gi|240169619|ref|ZP_04748278.1| formamidopyrimidine-DNA glycosylase [Mycobacterium kansasii ATCC 12478] Length=283 Score = 500 bits (1288), Expect = 9e-140, Method: Compositional matrix adjust. Identities = 250/289 (87%), Positives = 265/289 (92%), Gaps = 6/289 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL AHV G+T+T VRVHHPRAVRRH+AGPADLTARL GARI GTDRRG Sbjct 1 MPELPEVEVVRRGLAAHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWLTLN+ D+ALVVHLGMSGQMLLG VP + HVRISALLDDGTVLSFADQRT Sbjct 61 KYLWLTLNS------PDSALVVHLGMSGQMLLGVVPRSDHVRISALLDDGTVLSFADQRT 114 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGWLLADLVTVDGSVVP PVAHLARDPLDPRFD AVV+VLR KHSELKRQLL+Q VVS Sbjct 115 FGGWLLADLVTVDGSVVPAPVAHLARDPLDPRFDARAVVEVLRGKHSELKRQLLNQEVVS 174 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKVNGA VAATL R+LGAVL AAA+VMREALAKGGTSFDSLYVNVN Sbjct 175 GIGNIYADEALWRAKVNGARVAATLTRRQLGAVLDAAAEVMREALAKGGTSFDSLYVNVN 234 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 GESGYF+RSLDAYGR+G+NCRRCGAVIRRE+FMNRSSFYCPRCQPRPR+ Sbjct 235 GESGYFDRSLDAYGRDGQNCRRCGAVIRREKFMNRSSFYCPRCQPRPRR 283 >gi|183981796|ref|YP_001850087.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium marinum M] gi|238689243|sp|B2HJJ6.1|FPG_MYCMM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|183175122|gb|ACC40232.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium marinum M] Length=292 Score = 496 bits (1276), Expect = 2e-138, Method: Compositional matrix adjust. Identities = 249/293 (85%), Positives = 268/293 (92%), Gaps = 5/293 (1%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQ HV G+T+T VRVHHPRAVRRH+AGPADLTARL GARI+GTDRRG Sbjct 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60 Query 61 KYLWLTLN----TAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFA 116 KYLWLTL+ T G P DTALVVHLGMSGQMLLG VP A HVRISA+LDDGTVLSFA Sbjct 61 KYLWLTLDAGAPTTGRDDP-DTALVVHLGMSGQMLLGGVPRAEHVRISAVLDDGTVLSFA 119 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGGW LADLV+VDGSVVP PVAHLARDPLDP FD D+V+KVLR KHSE+KRQLLDQ Sbjct 120 DQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKVLRGKHSEIKRQLLDQ 179 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 +VVSGIGNIYADEALWRAKV+GA VAATL R+LGAVL AAADVMREALAKGGTSFDSLY Sbjct 180 QVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVMREALAKGGTSFDSLY 239 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 VNVNG+SGYF+RSLDAYGREGE+CRRCGAV+RRE+FMNRSSFYCPRCQPRPR+ Sbjct 240 VNVNGQSGYFDRSLDAYGREGEHCRRCGAVMRREKFMNRSSFYCPRCQPRPRR 292 >gi|342858222|ref|ZP_08714877.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Mycobacterium colombiense CECT 3035] gi|342133926|gb|EGT87106.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Mycobacterium colombiense CECT 3035] Length=289 Score = 496 bits (1276), Expect = 2e-138, Method: Compositional matrix adjust. Identities = 243/288 (85%), Positives = 262/288 (91%), Gaps = 0/288 (0%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL AHV G+T+T VRVHHPRAVRRH+AGPADLT RL ARI GTDRRG Sbjct 1 MPELPEVEVVRRGLHAHVVGKTMTAVRVHHPRAVRRHEAGPADLTVRLLNARITGTDRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWL L+T + +DTALVVHLGMSGQMLLG VP A HVRISALLDDGTVLSFADQRT Sbjct 61 KYLWLLLDTEPAGQESDTALVVHLGMSGQMLLGEVPRADHVRISALLDDGTVLSFADQRT 120 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGW+LADLV VDGSVVP PVAHLARDPLDPRFD DAVVKVLRRKHSE+KRQLLDQ+VVS Sbjct 121 FGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQLLDQQVVS 180 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKVNGA +A TL ++L AVL AAA+VMR+ALA+GGTSFDSLYVNVN Sbjct 181 GIGNIYADEALWRAKVNGARIADTLSRKQLTAVLDAAAEVMRDALAQGGTSFDSLYVNVN 240 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 GESGYF+RSLDAYGREGE CRRCGAV+RRE+FMNRSSFYCP+CQPRPR Sbjct 241 GESGYFDRSLDAYGREGEACRRCGAVMRREKFMNRSSFYCPKCQPRPR 288 >gi|296171391|ref|ZP_06852724.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894166|gb|EFG73925.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=286 Score = 494 bits (1271), Expect = 9e-138, Method: Compositional matrix adjust. Identities = 246/289 (86%), Positives = 263/289 (92%), Gaps = 3/289 (1%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQA V G+TIT VRVHHPRAVRRH+AGPADLTARL ARI GTDRRG Sbjct 1 MPELPEVEVVRRGLQAGVVGKTITAVRVHHPRAVRRHEAGPADLTARLLDARITGTDRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWL L+ G DTALVVHLGMSGQMLLG VP A HVRISALLDDGTVLSFADQRT Sbjct 61 KYLWLVLDGPG---QPDTALVVHLGMSGQMLLGEVPRADHVRISALLDDGTVLSFADQRT 117 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGW+LADLV VDGSVVP PVAHLARDPLDPRFD DAVV VLRRKHSE+KRQLLDQ VVS Sbjct 118 FGGWMLADLVEVDGSVVPAPVAHLARDPLDPRFDRDAVVDVLRRKHSEIKRQLLDQTVVS 177 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKVNGA +AATL RRLGAVL AAA+VMR+AL++GGTSFDSLYVNVN Sbjct 178 GIGNIYADEALWRAKVNGARIAATLSRRRLGAVLDAAAEVMRDALSQGGTSFDSLYVNVN 237 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 G+SGYF+RSLDAYGREG+NCRRCGAV+RRE+FMNRSSFYCP+CQPRPR+ Sbjct 238 GQSGYFDRSLDAYGREGQNCRRCGAVMRREKFMNRSSFYCPKCQPRPRR 286 >gi|118617607|ref|YP_905939.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] gi|166215639|sp|A0PQ49.1|FPG_MYCUA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118569717|gb|ABL04468.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium ulcerans Agy99] Length=292 Score = 491 bits (1265), Expect = 4e-137, Method: Compositional matrix adjust. Identities = 247/293 (85%), Positives = 267/293 (92%), Gaps = 5/293 (1%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQ HV G+T+T VRVHHPRAVRRH+AGPADLTARL GARI+GTDRRG Sbjct 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60 Query 61 KYLWLTLN----TAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFA 116 KYLWLTL+ T G P D ALVVHLGMSGQMLLG VP A HVRISA+LDDGTVLSFA Sbjct 61 KYLWLTLDAGAPTTGRDDP-DAALVVHLGMSGQMLLGGVPRAEHVRISAVLDDGTVLSFA 119 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGGW LADLV+VDGSVVP PVAHLARDPLDP FD D+V+KVLR KHSE+KR+LLDQ Sbjct 120 DQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKVLRGKHSEVKRRLLDQ 179 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 +VVSGIGNIYADEALWRAKV+GA VAATL R+LGAVL AAADVMREALAKGGTSFDSLY Sbjct 180 QVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVMREALAKGGTSFDSLY 239 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 VNVNG+SGYF+RSLDAYGREGE+CRRCGAV+RRE+FMNRSSFYCPRCQPRPR+ Sbjct 240 VNVNGQSGYFDRSLDAYGREGEHCRRCGAVMRREKFMNRSSFYCPRCQPRPRR 292 >gi|118464268|ref|YP_882954.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] gi|254776228|ref|ZP_05217744.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. avium ATCC 25291] gi|166215633|sp|A0QJ66.1|FPG_MYCA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118165555|gb|ABK66452.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] Length=283 Score = 488 bits (1257), Expect = 3e-136, Method: Compositional matrix adjust. Identities = 243/288 (85%), Positives = 261/288 (91%), Gaps = 6/288 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL +HV G+TI VRVHHPRAVRRH+AGPADLTARL GARI GTDRRG Sbjct 1 MPELPEVEVVRRGLHSHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWL L+ DTALVVHLGMSGQMLLGAVP A HVRISALLDDGTVLSFADQRT Sbjct 61 KYLWLLLDG------RDTALVVHLGMSGQMLLGAVPRAEHVRISALLDDGTVLSFADQRT 114 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGW+LADL+ VDGSVVP PVAHLARDPLDPRFD DAVVKVLRRKHSE+KRQLLDQ+VVS Sbjct 115 FGGWMLADLLEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQLLDQQVVS 174 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKV+GA +A L ++L AVL AAADVMR+ALAKGGTSFDSLYVNVN Sbjct 175 GIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTSFDSLYVNVN 234 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 GESGYF+RSLDAYGREGE+CRRCGAV+RRE+FMNRSSFYCP+CQPRPR Sbjct 235 GESGYFDRSLDAYGREGESCRRCGAVMRREKFMNRSSFYCPKCQPRPR 282 >gi|41409092|ref|NP_961928.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81700438|sp|Q73VL9.3|FPG_MYCPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|41397451|gb|AAS05311.1| Fpg [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459094|gb|EGO38043.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium avium subsp. paratuberculosis S397] Length=283 Score = 486 bits (1251), Expect = 2e-135, Method: Compositional matrix adjust. Identities = 241/288 (84%), Positives = 262/288 (91%), Gaps = 6/288 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL AHV G+TI VRVHHPRAVRRH+AGPADLTARL GARI GTDRRG Sbjct 1 MPELPEVEVVRRGLHAHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWL L+ DTALVVHLGMSGQMLLGAVP A HVRISALLDDGTVLSFADQRT Sbjct 61 KYLWLLLDGC------DTALVVHLGMSGQMLLGAVPRAEHVRISALLDDGTVLSFADQRT 114 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGW+LADL+ VDGS++P PVAHLARDPLDPRFD AVVKVLRRKHSE+KRQLLDQ+VVS Sbjct 115 FGGWMLADLLEVDGSILPRPVAHLARDPLDPRFDAAAVVKVLRRKHSEIKRQLLDQQVVS 174 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKV+GA +AAT+ R+L AVL AAA+VMR+ALA+GGTSFDSLYVNVN Sbjct 175 GIGNIYADEALWRAKVHGARIAATMTGRQLTAVLDAAAEVMRDALAQGGTSFDSLYVNVN 234 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 GESGYF+RSLDAYGREGE+CRRCGAV+RRE+FMNRSSFYCP+CQPRPR Sbjct 235 GESGYFDRSLDAYGREGESCRRCGAVMRREKFMNRSSFYCPKCQPRPR 282 >gi|254822110|ref|ZP_05227111.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare ATCC 13950] Length=282 Score = 484 bits (1245), Expect = 8e-135, Method: Compositional matrix adjust. Identities = 241/288 (84%), Positives = 258/288 (90%), Gaps = 7/288 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL AHV G+TIT VRVHHPRAVRRH+AG ADLTARL RI GTDRRG Sbjct 1 MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLNDRITGTDRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWL L++ D ALVVHLGMSGQMLLGAVP A HVRISALLDDGTVLSFADQRT Sbjct 61 KYLWLLLDS-------DAALVVHLGMSGQMLLGAVPRADHVRISALLDDGTVLSFADQRT 113 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGW+LADLV VDGSVVP PVAHLARDPLDPRFD DAVVKVLRRKHSE+KRQLLDQ+VVS Sbjct 114 FGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQLLDQQVVS 173 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRAKV+GA +A L ++L AVL AAADVMR+ALAKGGTSFDSLYVNVN Sbjct 174 GIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTSFDSLYVNVN 233 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 GESGYF+RSLDAYGREG+ CRRCGAV+RRE+FMNRSSFYCP+CQPRPR Sbjct 234 GESGYFDRSLDAYGREGQGCRRCGAVMRREKFMNRSSFYCPKCQPRPR 281 >gi|126434518|ref|YP_001070209.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. JLS] gi|166215636|sp|A3PXU1.1|FPG_MYCSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126234318|gb|ABN97718.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium sp. JLS] Length=296 Score = 466 bits (1198), Expect = 2e-129, Method: Compositional matrix adjust. Identities = 233/294 (80%), Positives = 253/294 (87%), Gaps = 8/294 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL AHVTG+ IT VRVHHPRAVRRH+AGPADLTARL G RI GT RRG Sbjct 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60 Query 61 KYLWLTLNTAGVHRP------TDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLS 114 KYLWLTL+ G P + ALVVHLGMSGQMLLG +P H+RI+ALLDDGT LS Sbjct 61 KYLWLTLD--GGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAALLDDGTALS 118 Query 115 FADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLL 174 F DQRTFGGWLLADLVTVDG+ VPVPVAH+ARDPLDPRFD DAVVKVLR KHSE+KRQLL Sbjct 119 FVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKVLRGKHSEIKRQLL 178 Query 175 DQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDS 234 DQ VVSGIGNIYADEALWRAKVNGA +A +L +L +L AADVMR+AL +GGTSFDS Sbjct 179 DQTVVSGIGNIYADEALWRAKVNGARLAESLTKPKLAEILDHAADVMRDALGQGGTSFDS 238 Query 235 LYVNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 LYVNVNGESGYF+RSLDAYGREGE CRRCGA++RRE+FMNRSSFYCPRCQPRPR Sbjct 239 LYVNVNGESGYFDRSLDAYGREGEPCRRCGAIMRREKFMNRSSFYCPRCQPRPR 292 >gi|108798918|ref|YP_639115.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. MCS] gi|119868033|ref|YP_937985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. KMS] gi|123369434|sp|Q1BAM5.1|FPG_MYCSS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215637|sp|A1UED7.1|FPG_MYCSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|108769337|gb|ABG08059.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. MCS] gi|119694122|gb|ABL91195.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium sp. KMS] Length=296 Score = 462 bits (1189), Expect = 3e-128, Method: Compositional matrix adjust. Identities = 229/292 (79%), Positives = 250/292 (86%), Gaps = 4/292 (1%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL AHVTG+ IT VRVHHPRAVRRH+AGPADLTARL G RI GT RRG Sbjct 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60 Query 61 KYLWLTLNTA----GVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFA 116 KYLWLTL+ + ALVVHLGMSGQMLLG +P H+RI+AL DDGT LSF Sbjct 61 KYLWLTLDDGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAALFDDGTALSFV 120 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGGWLLADLVTVDG+ VPVPVAH+ARDPLDPRFD DAVVKVLR KHSE+KRQLLDQ Sbjct 121 DQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKVLRGKHSEIKRQLLDQ 180 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 VVSGIGNIYADEALWRAKVNGA +A +L +L +L AADVMR+AL +GGTSFDSLY Sbjct 181 TVVSGIGNIYADEALWRAKVNGARLAESLTKPKLAEILDHAADVMRDALGQGGTSFDSLY 240 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNVNGESGYF+RSLDAYGREGE CRRCGA++RR++FMNRSSFYCPRCQPRPR Sbjct 241 VNVNGESGYFDRSLDAYGREGEPCRRCGAIMRRDKFMNRSSFYCPRCQPRPR 292 >gi|120403164|ref|YP_952993.1| formamidopyrimidine-DNA glycosylase [Mycobacterium vanbaalenii PYR-1] gi|166215640|sp|A1T737.1|FPG_MYCVP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119955982|gb|ABM12987.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium vanbaalenii PYR-1] Length=293 Score = 462 bits (1188), Expect = 3e-128, Method: Compositional matrix adjust. Identities = 228/292 (79%), Positives = 251/292 (86%), Gaps = 4/292 (1%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL HVTGRT+T VRVHHPRAVRRH+AGPADLTARL I GT RRG Sbjct 1 MPELPEVEVVRRGLAEHVTGRTVTAVRVHHPRAVRRHEAGPADLTARLLDTTITGTGRRG 60 Query 61 KYLWLTLNTAG----VHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFA 116 KYLWLTL R ++ ALVVHLGMSGQMLLG VP A H+RI+ALLDDGT LSF Sbjct 61 KYLWLTLGDGADEPLARRESNFALVVHLGMSGQMLLGDVPNANHLRIAALLDDGTTLSFV 120 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGGW+LADLVTVDGS VP PVAH+ARDPLDP FD DAVVKVLRRKHSE+KRQLLDQ Sbjct 121 DQRTFGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRDAVVKVLRRKHSEIKRQLLDQ 180 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 VVSGIGNIYADE+LWRAK+NGA +A+ + +L +L AAADVM +ALA+GGTSFDSLY Sbjct 181 TVVSGIGNIYADESLWRAKINGARLASGVSRAKLAELLGAAADVMTDALAQGGTSFDSLY 240 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNVNGESGYF+RSLDAYGREGE CRRCGA++RR++FMNRSSFYCPRCQPRPR Sbjct 241 VNVNGESGYFDRSLDAYGREGEPCRRCGAIMRRDKFMNRSSFYCPRCQPRPR 292 >gi|15827876|ref|NP_302139.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae TN] gi|221230353|ref|YP_002503769.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae Br4923] gi|7531120|sp|O69470.3|FPG_MYCLE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789446|sp|B8ZRZ2.1|FPG_MYCLB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|3150225|emb|CAA19197.1| formamidopyrimidine-dna glycosylase [Mycobacterium leprae] gi|13093429|emb|CAC30611.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae] gi|219933460|emb|CAR71753.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae Br4923] Length=282 Score = 452 bits (1163), Expect = 2e-125, Method: Compositional matrix adjust. Identities = 233/289 (81%), Positives = 252/289 (88%), Gaps = 7/289 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQ ++ G+TIT VRVHHPRAVRRH AGP DLT RL G RING DRRG Sbjct 1 MPELPEVEVVRRGLQDYIVGKTITAVRVHHPRAVRRHVAGPTDLTNRLLGTRINGIDRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLW L+T D ALVVHLGMSGQMLLG VP HVRISAL DDGTVL+F DQRT Sbjct 61 KYLWFLLDT-------DIALVVHLGMSGQMLLGTVPRVDHVRISALFDDGTVLNFTDQRT 113 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 GGWLLADL+TVDGSV+PVPVAHLARDP DPRFD +AVVKVLR KHSELKRQLLDQ+ VS Sbjct 114 LGGWLLADLMTVDGSVLPVPVAHLARDPFDPRFDVEAVVKVLRCKHSELKRQLLDQQTVS 173 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRA+V+GA +AATL R+L AVL AAADVMR++LAKGGTSFDSLYVNVN Sbjct 174 GIGNIYADEALWRAEVHGARIAATLTRRQLAAVLDAAADVMRDSLAKGGTSFDSLYVNVN 233 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 GESGYF+RSLDAYGREGE CRRCGAV+ RE+FMNRSSFYCPRCQPRPR+ Sbjct 234 GESGYFDRSLDAYGREGEGCRRCGAVMHREKFMNRSSFYCPRCQPRPRR 282 >gi|145224770|ref|YP_001135448.1| formamidopyrimidine-DNA glycosylase [Mycobacterium gilvum PYR-GCK] gi|315445100|ref|YP_004077979.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|189044665|sp|A4TE57.1|FPG_MYCGI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145217256|gb|ABP46660.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium gilvum PYR-GCK] gi|315263403|gb|ADU00145.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length=282 Score = 447 bits (1150), Expect = 1e-123, Method: Compositional matrix adjust. Identities = 221/288 (77%), Positives = 245/288 (86%), Gaps = 7/288 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL AHVTGRTI+ VRVHHPRAVRRH+AGPADLTARL + I GT RRG Sbjct 1 MPELPEVEVVRRGLAAHVTGRTISAVRVHHPRAVRRHEAGPADLTARLLDSVITGTGRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWLTL +A+VVHLGMSGQMLLG V H+RI+ LLDDGT LSF DQRT Sbjct 61 KYLWLTLGDG-------SAVVVHLGMSGQMLLGPVRNENHLRIAVLLDDGTALSFVDQRT 113 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGW+LADLVTVDGS VP PVAH+ARDPLDP FD AVV VLRRKHSE+KRQLLDQ VVS Sbjct 114 FGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRAAVVNVLRRKHSEIKRQLLDQTVVS 173 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADE+LWRAK+NGA +A+ + +L +L AA DVM +ALA+GGTSFDSLYVNVN Sbjct 174 GIGNIYADESLWRAKINGARLASGVSKAKLAELLDAATDVMTDALAQGGTSFDSLYVNVN 233 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 GESGYF+RSLDAYGREGE CRRCGA++RR++FMNRSSFYCPRCQPRPR Sbjct 234 GESGYFDRSLDAYGREGEPCRRCGAIMRRDKFMNRSSFYCPRCQPRPR 281 >gi|118470267|ref|YP_886759.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] gi|166215635|sp|A0QV21.1|FPG_MYCS2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118171554|gb|ABK72450.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] Length=285 Score = 443 bits (1140), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 220/288 (77%), Positives = 243/288 (85%), Gaps = 7/288 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL HVTG+TIT VRVHHPRAVRRH+AGPADLTARL RI GT RRG Sbjct 1 MPELPEVEVVRRGLAEHVTGKTITGVRVHHPRAVRRHEAGPADLTARLLDVRITGTGRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWLTL+ + ALVVHLGMSGQMLLG + H+RI+A+LDDGT LSF DQRT Sbjct 61 KYLWLTLDDSA-------ALVVHLGMSGQMLLGPIRDTRHLRIAAVLDDGTALSFVDQRT 113 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGW L ++VTVDG+ VP PVAH+ARDPLDP FD D VV VLR KHSE+KRQLLDQ VVS Sbjct 114 FGGWQLTEMVTVDGTDVPEPVAHIARDPLDPLFDRDRVVTVLRGKHSEIKRQLLDQTVVS 173 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWR K+NGA +AA L RRL +L AAA+VM +AL +GGTSFDSLYVNVN Sbjct 174 GIGNIYADEALWRTKINGARIAAALPRRRLAELLDAAAEVMTDALGQGGTSFDSLYVNVN 233 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 GESGYF+RSLDAYGREGE CRRCGA++RRE+FMNRSSFYCPRCQPRPR Sbjct 234 GESGYFDRSLDAYGREGEPCRRCGAIMRREKFMNRSSFYCPRCQPRPR 281 >gi|333991296|ref|YP_004523910.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium sp. JDM601] gi|333487264|gb|AEF36656.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium sp. JDM601] Length=278 Score = 425 bits (1092), Expect = 4e-117, Method: Compositional matrix adjust. Identities = 213/284 (75%), Positives = 234/284 (83%), Gaps = 7/284 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL AH+ GRTI VRVHHPRAVRRHDAGPADLT RL ARI GTDRRG Sbjct 1 MPELPEVEVVRRGLDAHLVGRTIAGVRVHHPRAVRRHDAGPADLTGRLLDARIVGTDRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 KYLWL L+T D ALVVHLGMSGQMLLG +P H+RI+A+LDDGT +SF DQRT Sbjct 61 KYLWLLLST-------DEALVVHLGMSGQMLLGDLPDTRHLRIAAVLDDGTKVSFVDQRT 113 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGW L DLV VD SVVP+PVAHLARDPLDPRFD ++VV VLRRKHSE+KRQLLDQ VVS Sbjct 114 FGGWQLTDLVAVDDSVVPLPVAHLARDPLDPRFDAESVVNVLRRKHSEIKRQLLDQTVVS 173 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 GIGNIYADEALWRA + G +A L RL A+L +A VM +ALA GGTSFDSLYVNVN Sbjct 174 GIGNIYADEALWRAGIRGTRMADALSRPRLRALLESARAVMSDALAAGGTSFDSLYVNVN 233 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQ 284 GESGYF RSLDAYGRE E CRRCG +IRR++F NRSS+YCP+CQ Sbjct 234 GESGYFSRSLDAYGREDEPCRRCGTLIRRQKFTNRSSYYCPKCQ 277 >gi|325675925|ref|ZP_08155608.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] gi|325553163|gb|EGD22842.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] Length=288 Score = 381 bits (979), Expect = 7e-104, Method: Compositional matrix adjust. Identities = 194/290 (67%), Positives = 221/290 (77%), Gaps = 8/290 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL+AHV G TI +V V HPRAVRRH G DL RL G + G +RRG Sbjct 1 MPELPEVEVVRRGLEAHVVGHTIADVEVLHPRAVRRHLPGSLDLAGRLEGQTVVGAERRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLG--AVPCAAHVRISALLDDGTVLSFADQ 118 KYLWL L P+ A+VVHLGMSGQML+ VP H+RI A L+ G L F DQ Sbjct 61 KYLWLVLE------PSSVAIVVHLGMSGQMLVQDPTVPDEKHLRIRARLESGIDLRFVDQ 114 Query 119 RTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRV 178 RTFGGW LADLVTVDG+VVP VAH+ARDPLDPRFD D VVK LR KH+E+KR LLDQ V Sbjct 115 RTFGGWALADLVTVDGTVVPDSVAHIARDPLDPRFDPDLVVKALRAKHTEIKRALLDQTV 174 Query 179 VSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVN 238 VSG+GNIYADEALWRA+++G L RL +L AA DVM EAL +GGTSFD+LYVN Sbjct 175 VSGVGNIYADEALWRAEIHGNRPTDKLSGPRLRVLLDAARDVMTEALDQGGTSFDALYVN 234 Query 239 VNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNG+SGYF+RSL+AYG+E CRRCGA IRRE+FMNRSS+ CP+CQPRPR Sbjct 235 VNGQSGYFDRSLNAYGQENLPCRRCGAPIRREKFMNRSSYSCPKCQPRPR 284 >gi|226365984|ref|YP_002783767.1| formamidopyrimidine-DNA glycosylase [Rhodococcus opacus B4] gi|254789448|sp|C1B2Q5.1|FPG_RHOOB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226244474|dbj|BAH54822.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus opacus B4] Length=289 Score = 374 bits (959), Expect = 1e-101, Method: Compositional matrix adjust. Identities = 191/291 (66%), Positives = 218/291 (75%), Gaps = 8/291 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL+ H+ G +I V + HPRA+RRH G ADL +L G RI G DRRG Sbjct 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIAGADRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGA--VPCAAHVRISALLDDGTVLSFADQ 118 KYLWL L P+ ALVVHLGMSGQML+ +P H+RI A LD G L F DQ Sbjct 61 KYLWLVLE------PSTVALVVHLGMSGQMLVQPPELPTEKHLRIRARLDSGLDLRFVDQ 114 Query 119 RTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRV 178 RTFGGW LA LV VDGS+VP VAH+ARDPLD RFD A VKV+R KHSE+KR LLDQ V Sbjct 115 RTFGGWALAPLVEVDGSLVPDSVAHIARDPLDSRFDLAATVKVVRGKHSEIKRVLLDQTV 174 Query 179 VSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVN 238 VSGIGNIYADEALWRA+++G + L R+GAVL AA VMREAL++GGTSFD+LYVN Sbjct 175 VSGIGNIYADEALWRAQIHGNRLTDRLTGPRIGAVLTAAQQVMREALSQGGTSFDALYVN 234 Query 239 VNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 VNGESGYF+RSL AYG+E C RCG IRRE+FMNRSSF CP+CQ PR+ Sbjct 235 VNGESGYFDRSLSAYGQEDRPCPRCGTAIRREKFMNRSSFSCPKCQRAPRR 285 >gi|111023482|ref|YP_706454.1| formamidopyrimidine-DNA glycosylase [Rhodococcus jostii RHA1] gi|123045457|sp|Q0S2E0.1|FPG_RHOSR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110823012|gb|ABG98296.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length=292 Score = 372 bits (955), Expect = 4e-101, Method: Compositional matrix adjust. Identities = 188/291 (65%), Positives = 217/291 (75%), Gaps = 8/291 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL+ H+ G +I V + HPRA+RRH G ADL +L G RI DRRG Sbjct 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIASADRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGA--VPCAAHVRISALLDDGTVLSFADQ 118 KYLWL L P+ ALVVHLGMSGQML+ +P H+RI A LD G L F DQ Sbjct 61 KYLWLVLE------PSTVALVVHLGMSGQMLVQPPELPTEKHLRIRARLDSGLDLRFVDQ 114 Query 119 RTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRV 178 RTFGGW LA LV VDGS+VP VAH+ARDPLDPRFD A VKV+R KH+E+KR LLDQ V Sbjct 115 RTFGGWALAPLVDVDGSLVPDSVAHIARDPLDPRFDLAATVKVVRGKHTEVKRALLDQTV 174 Query 179 VSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVN 238 VSGIGNIYADEALWRA+++G + L ++ VL AA +VMREAL +GGTSFD+LYVN Sbjct 175 VSGIGNIYADEALWRARIHGNRLTDRLSGPKVREVLTAAQEVMREALTQGGTSFDALYVN 234 Query 239 VNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 VNGESGYF+RSL AYG+E C RCG IRRE+FMNRSSF CP+CQP PR+ Sbjct 235 VNGESGYFDRSLSAYGQEDRPCPRCGTAIRREKFMNRSSFSCPKCQPAPRR 285 >gi|169630336|ref|YP_001703985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus ATCC 19977] gi|238688908|sp|B1MDL2.1|FPG_MYCA9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169242303|emb|CAM63331.1| Formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium abscessus] Length=286 Score = 371 bits (952), Expect = 9e-101, Method: Compositional matrix adjust. Identities = 185/285 (65%), Positives = 219/285 (77%), Gaps = 6/285 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL H+ G+TI V+H RAVRR G +L L G +I+GT RRG Sbjct 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60 Query 61 KYLWLTLN-TAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQR 119 KYLWLTL ++G ALVVHLGMSGQML+G + H+RI+A LDDG+VLSF DQR Sbjct 61 KYLWLTLEGSSGAQ-----ALVVHLGMSGQMLIGPISRPQHLRIAATLDDGSVLSFVDQR 115 Query 120 TFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVV 179 TFGGW++ DLVTVDGS +P PVAH+ARDPLD F+ AVV LR KH+E+KR LLDQ VV Sbjct 116 TFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEIGAVVTRLRGKHTEIKRALLDQTVV 175 Query 180 SGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNV 239 SG+GNIYADEALW+A+V+G + + +L VL +AA VMR ALA+GGTSFD LYVNV Sbjct 176 SGVGNIYADEALWQARVHGRRLTDGMSRAKLTEVLDSAAAVMRLALAQGGTSFDDLYVNV 235 Query 240 NGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQ 284 NGESGYF+RSL+AYGREGE CRRCG +RRE FMNRSS++CP CQ Sbjct 236 NGESGYFDRSLEAYGREGEPCRRCGRAMRREAFMNRSSYFCPSCQ 280 >gi|229491415|ref|ZP_04385239.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] gi|229321700|gb|EEN87497.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] Length=289 Score = 358 bits (918), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 182/290 (63%), Positives = 212/290 (74%), Gaps = 8/290 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQ+H G I V V HPRA+RRH G DL +L G I +RRG Sbjct 1 MPELPEVEVVRRGLQSHAVGAAIEAVEVLHPRAIRRHILGSEDLIGQLTGQTIASAERRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLG--AVPCAAHVRISALLDDGTVLSFADQ 118 KYLWL L AGV LVVHLGMSGQML+ V H+RI LD G L F DQ Sbjct 61 KYLWLVLEPAGV------GLVVHLGMSGQMLVQPPTVDWEKHLRIRLALDSGADLRFVDQ 114 Query 119 RTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRV 178 RTFGGW ++ LV VDG+++P VAH+ARDP+D FD ++VVKVLR KH+E+KR +LDQ V Sbjct 115 RTFGGWSISPLVEVDGTMLPESVAHIARDPMDAAFDLESVVKVLRGKHTEIKRAILDQTV 174 Query 179 VSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVN 238 VSGIGNIYADE+LWRAK++G +A TL +L +L AA VM EAL +GGTSFD+LYVN Sbjct 175 VSGIGNIYADESLWRAKIHGNRIAETLTRPKLRELLTAAHSVMGEALDQGGTSFDALYVN 234 Query 239 VNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNGESGYF+RSL AYG+E C RCGA I+RE+FMNRSSF CPRCQP PR Sbjct 235 VNGESGYFDRSLSAYGQENLPCPRCGAPIKREKFMNRSSFSCPRCQPTPR 284 >gi|296139285|ref|YP_003646528.1| formamidopyrimidine-DNA glycosylase [Tsukamurella paurometabola DSM 20162] gi|296027419|gb|ADG78189.1| formamidopyrimidine-DNA glycosylase [Tsukamurella paurometabola DSM 20162] Length=286 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 181/288 (63%), Positives = 219/288 (77%), Gaps = 3/288 (1%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL H+ GRT+T V V HPRA RRH AG ADL ++ GA++ +RRG Sbjct 1 MPELPEVEVVRRGLADHLVGRTVTAVEVLHPRAARRHVAGDADLIGQVTGAQVTSAERRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISALLDDGTVLSFADQRT 120 K+LWL L AG RP D A+VVHLGMSGQML+G H+RI A LDDG VL F DQRT Sbjct 61 KFLWLPLARAG--RPADAAIVVHLGMSGQMLVGPGD-DRHLRIRAGLDDGAVLRFVDQRT 117 Query 121 FGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVS 180 FGGW + LV VDG++VP VAH+ARDPLD RFD AV+ ++ K +E+KR LLDQ V+S Sbjct 118 FGGWAVDPLVEVDGTLVPESVAHIARDPLDARFDRAAVIARMKAKDTEVKRVLLDQTVIS 177 Query 181 GIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVN 240 G+GNIYADEALW ++V+G A+ L LG ++ A +VMR+AL +GGTSFDSLYVNVN Sbjct 178 GVGNIYADEALWLSRVHGRRRASALTKPALGRLVDDATEVMRKALDQGGTSFDSLYVNVN 237 Query 241 GESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 G+SGYFERSL+AYGR+GE CRRCG ++RRE+FMNR S +CP CQ PR Sbjct 238 GQSGYFERSLNAYGRDGEPCRRCGTIMRREQFMNRGSHFCPTCQTAPR 285 >gi|226305919|ref|YP_002765879.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus erythropolis PR4] gi|259647148|sp|C0ZXQ5.1|FPG_RHOE4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226185036|dbj|BAH33140.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus erythropolis PR4] Length=289 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 181/290 (63%), Positives = 212/290 (74%), Gaps = 8/290 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQ+H G I V V HPRA+RRH G DL +L G I +RRG Sbjct 1 MPELPEVEVVRRGLQSHAVGAAIEAVEVLHPRAIRRHILGSEDLIGQLTGQTIASAERRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLG--AVPCAAHVRISALLDDGTVLSFADQ 118 KYLWL L AGV LVVHLGMSGQML+ V H+RI LD G L F DQ Sbjct 61 KYLWLVLEPAGV------GLVVHLGMSGQMLVQPPTVDWEKHLRIRLALDSGADLRFVDQ 114 Query 119 RTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRV 178 RTFGGW ++ LV VDG+++P VAH+ARDP+D FD ++VVKVLR KH+E+KR +LDQ V Sbjct 115 RTFGGWSISPLVEVDGTMLPESVAHIARDPMDAAFDLESVVKVLRGKHTEIKRAILDQTV 174 Query 179 VSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVN 238 VSGIGNIYADE+LWRAK++G +A +L +L +L AA VM EAL +GGTSFD+LYVN Sbjct 175 VSGIGNIYADESLWRAKIHGNRIAESLTRPKLRELLTAAHSVMGEALDQGGTSFDALYVN 234 Query 239 VNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNGESGYF+RSL AYG+E C RCGA I+RE+FMNRSSF CPRCQP PR Sbjct 235 VNGESGYFDRSLSAYGQENLPCPRCGAPIKREKFMNRSSFSCPRCQPTPR 284 >gi|54026154|ref|YP_120396.1| formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] gi|81679878|sp|Q5YS09.3|FPG_NOCFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54017662|dbj|BAD59032.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] Length=294 Score = 352 bits (902), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 184/285 (65%), Positives = 210/285 (74%), Gaps = 10/285 (3%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL HV GR + V + HPR+VRRH AG ADL AR+ G R+ RRG Sbjct 1 MPELPEVEVVRRGLAEHVAGRVVGAVTITHPRSVRRHLAGSADLAARMTGRRVRAAQRRG 60 Query 61 KYLWLTLNTAGVHRPT--DTALVVHLGMSGQMLL--GAVPCAAHVRISALLDDGTVLSFA 116 KYLWLT + G T D ALVVHLGMSGQML+ A P H I A LDDG+ L F Sbjct 61 KYLWLTFDEPGAADETALDAALVVHLGMSGQMLVQPAAAPVEKHAHIRAALDDGSELRFV 120 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGGW LA L VDGS+VP PVAH+ARDPLDPRFD ++VV +R K+SE+KR LLDQ Sbjct 121 DQRTFGGWALAPLAEVDGSLVPEPVAHIARDPLDPRFDAESVVAAIRAKNSEIKRVLLDQ 180 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLR---CRRLGAVLHAAADVMREALAKGGTSFD 233 VVSGIGNIYADE+LWRA +NG +A+ L RRL A + A VM EALA GGTSFD Sbjct 181 TVVSGIGNIYADESLWRAGINGNRLASGLTRPAVRRLLAEVRA---VMLEALAAGGTSFD 237 Query 234 SLYVNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSF 278 +LYVNVNG+SGYFER+L YGR+ E CRRCGA I RE+FMNRSS+ Sbjct 238 ALYVNVNGQSGYFERALAVYGRQDEPCRRCGAPIVREKFMNRSSY 282 >gi|343925328|ref|ZP_08764853.1| formamidopyrimidine-DNA glycosylase [Gordonia alkanivorans NBRC 16433] gi|343764767|dbj|GAA11779.1| formamidopyrimidine-DNA glycosylase [Gordonia alkanivorans NBRC 16433] Length=283 Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 177/289 (62%), Positives = 209/289 (73%), Gaps = 12/289 (4%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVE VR GL+ H+TGRT+T V V HPRA RRH G DL RL G + G RRG Sbjct 1 MPELPEVETVRMGLEKHLTGRTVTAVEVLHPRAARRHLGGEPDLIGRLAGKHVTGVRRRG 60 Query 61 KYLWLTLNTAGVHRPTD-TALVVHLGMSGQMLLG--AVPCAAHVRISALLDDGTVLSFAD 117 KY+W+ V TD ALVVHLGMSGQML+ P H+RI A LDD L F D Sbjct 61 KYMWID-----VADDTDRAALVVHLGMSGQMLIARDGAPDHTHLRIRAHLDDDNELRFVD 115 Query 118 QRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQR 177 QRTFGGW L D V +PV VAH+A DP DP FD AVV +R KHSE+KR LLDQ Sbjct 116 QRTFGGWHLDDYV----DDIPVSVAHIAPDPFDPAFDAAAVVTRMRAKHSEIKRVLLDQT 171 Query 178 VVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYV 237 V+SG+GNIYADEALWRA+++GA +A T+ +++ ++ AA VM EA+ GGTSFD+LYV Sbjct 172 VISGVGNIYADEALWRARLHGARIAETISRKKILELIDAATAVMSEAVEVGGTSFDALYV 231 Query 238 NVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPR 286 NVNG+SGYFERSL+AYGREG+ CRRCGA++RRE FMNRSS+YCPRCQ R Sbjct 232 NVNGQSGYFERSLNAYGREGQPCRRCGAIMRRESFMNRSSYYCPRCQRR 280 >gi|262202010|ref|YP_003273218.1| formamidopyrimidine-DNA glycosylase [Gordonia bronchialis DSM 43247] gi|262085357|gb|ACY21325.1| formamidopyrimidine-DNA glycosylase [Gordonia bronchialis DSM 43247] Length=295 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 176/294 (60%), Positives = 206/294 (71%), Gaps = 12/294 (4%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVE VRRGL H+ GRTI +V V HPRA RRH G DL RLR + G RRG Sbjct 1 MPELPEVETVRRGLADHLVGRTIRKVEVLHPRAARRHVGGDLDLIGRLRNKSVTGVRRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLG--AVPCAAHVRISALLDDGTVLSFADQ 118 KYLWL + A A+VVHLGMSGQML+ P H+RI A LDDG L F DQ Sbjct 61 KYLWLDVADA----RDRAAVVVHLGMSGQMLIARAGAPDHTHLRIRASLDDGNELRFVDQ 116 Query 119 RTFGGWLLADL------VTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQ 172 RTFGGW + D V S++P VAH+ARDP DP FD +A V +R KHSE+KR Sbjct 117 RTFGGWHVDDYAEPEDAVAQSSSLLPTSVAHIARDPFDPDFDAEATVSRIRTKHSEIKRV 176 Query 173 LLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSF 232 LLDQ V+SG+GNIYADEALWRA++ G VA + +L +L A +DVM EALA GGTSF Sbjct 177 LLDQTVISGVGNIYADEALWRARLYGGRVADGISRPKLRELLTAVSDVMGEALAVGGTSF 236 Query 233 DSLYVNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPR 286 D+LYVNVNG+SGYFERSL+AYGR G+ CRRCG ++RRE FMNRSS++CPRCQ R Sbjct 237 DALYVNVNGQSGYFERSLNAYGRAGQPCRRCGQMMRRESFMNRSSYFCPRCQRR 290 >gi|333920820|ref|YP_004494401.1| fomramidopyrimidine-DNA glycosylase [Amycolicicoccus subflavus DQS3-9A1] gi|333483041|gb|AEF41601.1| Formamidopyrimidine-DNA glycosylase [Amycolicicoccus subflavus DQS3-9A1] Length=292 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 174/290 (60%), Positives = 205/290 (71%), Gaps = 7/290 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL++H + I V V HPRAVRRH AGPADL RL G +G RRG Sbjct 1 MPELPEVEVVRRGLESHALRQQIESVEVRHPRAVRRHAAGPADLAGRLAGRAFSGAFRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAV--PCAAHVRISALLDDGTVLSFADQ 118 KYLWLTL D+ LV HLGMSGQML+ A P H RI LD GT L F DQ Sbjct 61 KYLWLTLAEKNPDEAADSVLV-HLGMSGQMLVQAADAPMEPHARIVVTLDGGTHLRFVDQ 119 Query 119 RTFGGWLLADLVTV----DGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLL 174 RTFGGWL+A LV G ++P P+ H+ARDPLDP FD AV++V+RRK SE+KR LL Sbjct 120 RTFGGWLVAPLVPAVPDSAGELLPQPIVHIARDPLDPLFDERAVIEVIRRKPSEIKRILL 179 Query 175 DQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDS 234 DQ V+SG+GNIYADEALWRA ++G A +L ++ +L AA +VM EALA+GGTSFD+ Sbjct 180 DQSVISGVGNIYADEALWRAGIHGNRSARSLSRAKIRTILFAAREVMIEALAQGGTSFDA 239 Query 235 LYVNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQ 284 LYVNVNG+SG+F+RSL YG EG C RCG I RE+F NRSS +CP CQ Sbjct 240 LYVNVNGQSGFFDRSLRVYGLEGHPCERCGTPIVREKFTNRSSHFCPICQ 289 >gi|300783720|ref|YP_003764011.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299793234|gb|ADJ43609.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] gi|340525110|gb|AEK40315.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Amycolatopsis mediterranei S699] Length=289 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 174/292 (60%), Positives = 201/292 (69%), Gaps = 11/292 (3%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVR GLQ HV GRTI E V HPRA+RRH G D T RL G R+ RRG Sbjct 1 MPELPEVEVVRLGLQVHVAGRTIREAEVLHPRAIRRHALGAEDFTQRLAGTRVEAARRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLG--AVPCAAHVRISA-LLDDGTVLSFAD 117 KYLWL L+ AL+ HLGMSGQML+ P H+R+ DDG L F D Sbjct 61 KYLWLELSDK-------EALLAHLGMSGQMLVQPEGAPDEKHLRVRLRFEDDGPELRFVD 113 Query 118 QRTFGGWLLADLVTVDGSVV-PVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 QRTFGG L DL + V+ P +AH+ARDP+DP FD DA V+ LR + +E+KR LLDQ Sbjct 114 QRTFGGLALDDLSDIGSEVLLPDTIAHIARDPMDPEFDLDAAVRALRSRRTEVKRALLDQ 173 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 +VSGIGNIYADEALWRA+++ A L + +L AA+DVM AL GGTSFD+LY Sbjct 174 TLVSGIGNIYADEALWRARLHWARPTEKLTMAKGRELLSAASDVMNAALGAGGTSFDALY 233 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNVNG+SGYF+RSLDAYG+EG C RCG IRRE FMNRSSF CPRCQPRPR Sbjct 234 VNVNGQSGYFDRSLDAYGQEGMPCHRCGTAIRREPFMNRSSFSCPRCQPRPR 285 >gi|256379956|ref|YP_003103616.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827] gi|255924259|gb|ACU39770.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827] Length=291 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 166/291 (58%), Positives = 203/291 (70%), Gaps = 10/291 (3%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL HVTGRT+ V V H RA+RRH G AD RL G R++ RRG Sbjct 1 MPELPEVEVVRRGLHEHVTGRTVASVEVLHARAIRRHLPGAADFAVRLTGQRMDAARRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAV--PCAAHVRISALL-DDGTVLSFAD 117 KYLW+ L+ A++ HLGMSGQML+ V P H+R+ + DDG L F D Sbjct 61 KYLWVDLSGG-------EAVLAHLGMSGQMLVQPVGAPDEKHLRVRVVFEDDGPELRFVD 113 Query 118 QRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQR 177 QRTFGG L +LV VDG+ +P V+H+ARDP+DP FD DA V+ LR + +++KR LLDQ Sbjct 114 QRTFGGLALDELVEVDGTWLPRQVSHIARDPMDPEFDADAAVRALRSRKTDVKRALLDQT 173 Query 178 VVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYV 237 +VSG+GNIYADE+LWRA+++G A L + +L A VM EAL +GGTSFD+LYV Sbjct 174 LVSGVGNIYADESLWRARLHGLRPTAKLTTAKTAELLGHATQVMLEALGQGGTSFDALYV 233 Query 238 NVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 NVNG+SGYF+RSL YG+E C RCG I RE FMNRSS+ CPRCQPRPR Sbjct 234 NVNGQSGYFDRSLAVYGQEDRPCARCGTAIVREPFMNRSSYSCPRCQPRPR 284 >gi|302525052|ref|ZP_07277394.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] gi|302433947|gb|EFL05763.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] Length=286 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 170/291 (59%), Positives = 202/291 (70%), Gaps = 10/291 (3%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVE VR GL+AHV GRT+ V V H RA+RRH G AD T RL G I RRG Sbjct 1 MPELPEVETVRAGLEAHVAGRTVRAVEVLHDRAIRRHAQGAADFTGRLAGVAIEAARRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLG--AVPCAAHVRISA-LLDDGTVLSFAD 117 KYLWL L+ A++ HLGMSGQML+ P H+R+ D G L F D Sbjct 61 KYLWLELSDG-------EAVLAHLGMSGQMLVQPEGAPDEKHLRVRVRFADGGPELRFVD 113 Query 118 QRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQR 177 QRTFGG L +LV VDG +P +AH+ARDP+DP+FD +A V+ LR + +E+KR LLDQ Sbjct 114 QRTFGGLALDELVVVDGDSLPGTIAHIARDPMDPKFDPEAAVRALRSRRTEVKRALLDQT 173 Query 178 VVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYV 237 +VSG+GNIYADEALWR+K++ + L + +L AA+DVM AL GGTSFD+LYV Sbjct 174 LVSGVGNIYADEALWRSKLHWSRPTEKLTAAQGRTLLSAASDVMSAALLAGGTSFDALYV 233 Query 238 NVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 NVNGESGYFERSLDAYG+EG CRRCG+ IRRE FMNRSSF CPRCQ R R Sbjct 234 NVNGESGYFERSLDAYGQEGLPCRRCGSPIRREPFMNRSSFSCPRCQRRAR 284 >gi|331698523|ref|YP_004334762.1| formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326953212|gb|AEA26909.1| Formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans CB1190] Length=298 Score = 321 bits (823), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 175/295 (60%), Positives = 200/295 (68%), Gaps = 6/295 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL HV GR I V V HPRA+RRH AG AD T RL G + RRG Sbjct 1 MPELPEVEVVRRGLADHVAGRRIATVTVAHPRAIRRHAAGAADFTGRLAGRLVGAVRRRG 60 Query 61 KYLWLTLNTAG--VHRPTDTALVVHLGMSGQMLLG--AVPCAAHVRISALLDD-GTVLSF 115 KYLWL L A +P D A++ HLGMSGQML+ P H+R+ DD G L F Sbjct 61 KYLWLELADAAQDAPQPGDDAVLAHLGMSGQMLVADHGKPDEKHLRVRVTFDDDGPELRF 120 Query 116 ADQRTFGGWLLADLV-TVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLL 174 DQRTFGG L G ++P PVAH+ARDP+DP F D V +RR+ + LKR LL Sbjct 121 VDQRTFGGLSAHPLAPAAGGGLLPAPVAHIARDPMDPAFVLDDAVAGIRRRRTGLKRALL 180 Query 175 DQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDS 234 DQ VVSGIGNIYADEALWRA+++ A +L + AVL AAA+VM EALA+GGTSFD+ Sbjct 181 DQTVVSGIGNIYADEALWRARLHWARPTESLTRAQGRAVLTAAAEVMDEALAQGGTSFDA 240 Query 235 LYVNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 LYVNVNG SGYF+RSL YG+ C RCG IRRE FMNRSSF CPRCQPRPR Sbjct 241 LYVNVNGASGYFDRSLAVYGQTDRACPRCGTPIRREAFMNRSSFSCPRCQPRPRN 295 >gi|134102536|ref|YP_001108197.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|291007097|ref|ZP_06565070.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|166198746|sp|A4FMJ7.1|FPG_SACEN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|133915159|emb|CAM05272.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length=295 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 166/292 (57%), Positives = 200/292 (69%), Gaps = 3/292 (1%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRG+ AHV GRT++EV V HPR+VRRH GP D RL G + RRG Sbjct 1 MPELPEVEVVRRGVAAHVVGRTVSEVEVLHPRSVRRHVPGPDDFATRLAGRCLTAARRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLL--GAVPCAAHVRISALLDDG-TVLSFAD 117 KY+WL L A++ HLGMSGQ+L+ P H+R+ DDG L F D Sbjct 61 KYMWLELGGGPEEVDAGEAVLAHLGMSGQLLVQPDEAPDETHLRVRFRFDDGGPQLRFVD 120 Query 118 QRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQR 177 QRTFGG L +LV+VDG VP PVAH+A DPL+P FD +A V +R++ + +KR LLDQ Sbjct 121 QRTFGGLSLTELVSVDGVAVPEPVAHIAPDPLEPVFDLEAAVARMRKRRTGVKRALLDQT 180 Query 178 VVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYV 237 +VSGIGNIYADEALWRAK++ A A L + +L AA +VM+ AL GGTSFD LYV Sbjct 181 LVSGIGNIYADEALWRAKLHWARPTANLTRPQARTLLVAAVEVMQAALTAGGTSFDDLYV 240 Query 238 NVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 NVNGESGYF+RSL YG+ G C RCG +RR+ FMNRSS+ CPRCQP PR Sbjct 241 NVNGESGYFDRSLAVYGQAGLPCPRCGTPVRRDAFMNRSSYSCPRCQPTPRN 292 >gi|257055002|ref|YP_003132834.1| formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] gi|256584874|gb|ACU96007.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] Length=287 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 175/292 (60%), Positives = 204/292 (70%), Gaps = 10/292 (3%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVR GL+ HV GR ++ V V HPRA+RRH G AD RL GA+I RRG Sbjct 1 MPELPEVEVVRAGLEKHVLGRIVSSVEVLHPRAIRRHVLGEADFVGRLVGAKITAVCRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLG--AVPCAAHVRISA-LLDDGTVLSFAD 117 KYLW L TA++ HLGMSGQML+ V H+R+ DDG L F D Sbjct 61 KYLWFELADG-------TAVLAHLGMSGQMLIQPRGVVDEKHLRVRFRFSDDGPELRFVD 113 Query 118 QRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQR 177 QRTFGG L DLV V+G+V+P +AH+ARDPLDP FD A + LR + +E+KR LLDQ Sbjct 114 QRTFGGLSLTDLVEVEGTVLPSAIAHIARDPLDPLFDVVATARALRTRRTEVKRALLDQT 173 Query 178 VVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYV 237 +VSGIGNIYADEALWR ++ A A L + VL AAA++M EAL GGTSFD+LYV Sbjct 174 LVSGIGNIYADEALWRVGLHWARPADRLTATQARGVLAAAAEMMVEALRVGGTSFDALYV 233 Query 238 NVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 NVNGESGYF RSLDAYGREGE CRRCG++I RE F NRSSF CPRCQP+PR Sbjct 234 NVNGESGYFSRSLDAYGREGEPCRRCGSLIVREAFTNRSSFSCPRCQPKPRS 285 >gi|296393288|ref|YP_003658172.1| formamidopyrimidine-DNA glycosylase [Segniliparus rotundus DSM 44985] gi|296180435|gb|ADG97341.1| formamidopyrimidine-DNA glycosylase [Segniliparus rotundus DSM 44985] Length=283 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 167/290 (58%), Positives = 200/290 (69%), Gaps = 10/290 (3%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL H+TG I +RV HPR+ RRH G A L A L + RRG Sbjct 1 MPELPEVEVVRRGLAEHLTGARIRALRVLHPRSARRHPGGGAFLAAALSERDVRAVRRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLG--AVP-CAAHVRISALLDDGTVLSFAD 117 KYLWL L+ + ++V+HLGMSGQ +G VP AH+R+ A L DG L F D Sbjct 61 KYLWLVLDD-------EESVVIHLGMSGQFRVGDQGVPGNPAHLRVEADLADGRTLQFFD 113 Query 118 QRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQR 177 QRTFGGW A L VDG +VP PVAH+ARDP DP+FD AV + +R K S +KR LLDQ Sbjct 114 QRTFGGWEFAALQEVDGELVPAPVAHIARDPFDPKFDPAAVARRVRAKRSAIKRVLLDQT 173 Query 178 VVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYV 237 V+SG+GNIYADE+LWRA+++G AA L R+ +L A A V+ E++ +GGTSFDSLYV Sbjct 174 VLSGVGNIYADESLWRARLHGEQPAAGLSPRKTAELLDALAVVLGESITEGGTSFDSLYV 233 Query 238 NVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRP 287 NVNGESG F L YG+EG+ CRRCG+ IRRE FMNRSS YCPRCQ P Sbjct 234 NVNGESGRFSDWLAVYGQEGKPCRRCGSAIRREAFMNRSSHYCPRCQRLP 283 >gi|345009586|ref|YP_004811940.1| Formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu 4113] gi|344035935|gb|AEM81660.1| Formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu 4113] Length=310 Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 171/293 (59%), Positives = 199/293 (68%), Gaps = 10/293 (3%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL+ V+GRT+ EV+V HPRAVRRH GP D ARLRG R RRG Sbjct 1 MPELPEVEVVRRGLERWVSGRTVAEVQVLHPRAVRRHLGGPEDFAARLRGRRTGIVRRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLL--GAVPCAAHVRISALLDD--GTVLSFA 116 KYLWL + A++ HLGMSGQ+L+ P H+RI D GT L F Sbjct 61 KYLWLPFDDDAAA----EAVLAHLGMSGQLLVQPAEAPDEKHLRIRVRFADAAGTELRFV 116 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGG L D V D +P +AH+ARDPLDP FD A LRR+ + +KR LLDQ Sbjct 117 DQRTFGGLSLHDTVPGDLEGLPDAIAHIARDPLDPAFDEAAFHTALRRRRTTIKRALLDQ 176 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 ++SG+GNIYADEALWRA+++ ATL R +L +VM ALA GGTSFDSLY Sbjct 177 SLISGVGNIYADEALWRARLHYDRPTATLARPRAAELLGHVREVMTAALAVGGTSFDSLY 236 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQ--PRP 287 VNVNGESGYFERSLDAYGRE E CRRCG +RR +MNRSS++CPRCQ PRP Sbjct 237 VNVNGESGYFERSLDAYGRENEPCRRCGTAMRRRPWMNRSSYFCPRCQRPPRP 289 >gi|326382853|ref|ZP_08204543.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Gordonia neofelifaecis NRRL B-59395] gi|326198443|gb|EGD55627.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Gordonia neofelifaecis NRRL B-59395] Length=295 Score = 315 bits (808), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 162/290 (56%), Positives = 200/290 (69%), Gaps = 6/290 (2%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 +PELPEVE +R GL AH++GR++ +V V HPRA RRH GP DL+ RLRG R G +RRG Sbjct 3 VPELPEVETIRLGLSAHLSGRSVRDVEVLHPRAARRHVGGPIDLSNRLRGKRFEGAERRG 62 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLG--AVPCAAHVRISALLDDGTVLSFADQ 118 KY+WL + + + A+VVHLGMSGQML+ H+RI LDDG L F DQ Sbjct 63 KYMWLLASDSA----DEVAVVVHLGMSGQMLIAEQGAEDPVHLRIRVPLDDGHELRFVDQ 118 Query 119 RTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRV 178 RTFGGW L DLV +P VAH+A DP + FD AV+ LRR+ +E+KR +LDQ V Sbjct 119 RTFGGWHLDDLVDTGPRRLPESVAHIAPDPFEDAFDRGAVIDSLRRRDTEIKRAILDQTV 178 Query 179 VSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVN 238 +SG+GNIYADE+LWRA+++G + RLG ++ A VM EA+ GGTSFD LYVN Sbjct 179 ISGVGNIYADESLWRAELHGRRRTRGIPRARLGDLVDHATQVMGEAIKVGGTSFDDLYVN 238 Query 239 VNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNG+SGYFERSL+AYGREG CRRC + RE FMNRSSF+CP CQ PR Sbjct 239 VNGQSGYFERSLNAYGREGLLCRRCETPMVREAFMNRSSFFCPTCQRVPR 288 >gi|294815351|ref|ZP_06773994.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|326443705|ref|ZP_08218439.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|294327950|gb|EFG09593.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length=289 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 176/293 (61%), Positives = 205/293 (70%), Gaps = 14/293 (4%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQ V+GRTI EVRV HPRAVRRH AG D ARL+G + RRG Sbjct 1 MPELPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCA--AHVRISALLDD--GTVLSFA 116 KYLWL L TD++++ HLGMSGQ+L+ A H+RI DD GT L F Sbjct 61 KYLWLPLAD------TDSSVLGHLGMSGQLLVQPEDAADEKHLRIRISFDDSLGTELRFV 114 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGG L D T DG +P +AH+ARDPLDP FD DA LR K + +KR LLDQ Sbjct 115 DQRTFGGLSLHD-NTPDG--LPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRALLDQ 171 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 ++SG+GNIYADEALWRA+++ A+L R +L DVM ALA GGTSFDSLY Sbjct 172 SLISGVGNIYADEALWRARLHYERPTASLTRPRSAELLGHIRDVMNAALAAGGTSFDSLY 231 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 VNVNGESGYF+RSLDAYGREGE CRRCG +RR +MNRSS++CPRCQ RP + Sbjct 232 VNVNGESGYFDRSLDAYGREGEPCRRCGTPMRRRPWMNRSSYFCPRCQ-RPSR 283 >gi|239991060|ref|ZP_04711724.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 11379] gi|291448062|ref|ZP_06587452.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces roseosporus NRRL 15998] gi|291351009|gb|EFE77913.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces roseosporus NRRL 15998] Length=286 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 173/292 (60%), Positives = 203/292 (70%), Gaps = 13/292 (4%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL+ V+GRT+TEV V HPR+VRRH AG D ARLRGAR+ RRG Sbjct 1 MPELPEVEVVRRGLERWVSGRTVTEVEVLHPRSVRRHLAGGVDFAARLRGARLGAAMRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLL--GAVPCAAHVRISALLDD--GTVLSFA 116 KYLW+ + A +L+ HLGMSGQ+L+ P H+RI DD GT L F Sbjct 61 KYLWVPIEEASA------SLLGHLGMSGQLLVQPADAPDEKHLRIRMRFDDALGTELRFV 114 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGG L D T DG +P +AH+ARDPLDP FD A LR + + +KR LLDQ Sbjct 115 DQRTFGGLSLHD-NTPDG--LPDTIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQ 171 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 ++SG+GNIYADEALWRAK++ ATL + +L A DVM ALA+GGTSFDSLY Sbjct 172 SLISGVGNIYADEALWRAKLHYDRPTATLTRPKSAELLGHARDVMNAALAQGGTSFDSLY 231 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNVNGESGYF+RSLDAYGREGE C RC +RR +MNRSS+YCPRCQ PR Sbjct 232 VNVNGESGYFDRSLDAYGREGEPCNRCSTPMRRRAWMNRSSYYCPRCQRPPR 283 >gi|311742942|ref|ZP_07716750.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] gi|311313622|gb|EFQ83531.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] Length=284 Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 167/291 (58%), Positives = 200/291 (69%), Gaps = 12/291 (4%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVR GL HV GRT+++VRV R++RRH GP D RLRG + RRG Sbjct 1 MPELPEVEVVRLGLVDHVVGRTVSDVRVLDARSLRRHLPGPVDFADRLRGRTVVDACRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGA--VPCAAHVRISALLDDGTVLSFADQ 118 KYLWL L+ +AL HLGMSGQML+G P H+R+ LDDGT L F DQ Sbjct 61 KYLWLPLDDG-------SALTAHLGMSGQMLIGTEQTPDPRHLRVGLDLDDGTRLHFVDQ 113 Query 119 RTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRV 178 R FGG ++D V+ DG VP +AH+ARDPLDP FD + LRR+ + +KR LLDQ + Sbjct 114 RIFGGLAVSDQVS-DG--VPAAMAHIARDPLDPAFDAEEFSARLRRRQTGVKRALLDQTL 170 Query 179 VSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVN 238 VSGIGNIYADEALWR ++ A LR + A++ DVMR AL +GGTSFD+LYVN Sbjct 171 VSGIGNIYADEALWRVPLHYARNTRHLRRAEIDALVEHVTDVMRAALEQGGTSFDALYVN 230 Query 239 VNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 VNG+SGYF+RSL AYGREGE C RC +RR FMNRSSF+CP CQPRPR+ Sbjct 231 VNGQSGYFDRSLHAYGREGEPCDRCTTPMRRSPFMNRSSFWCPACQPRPRQ 281 >gi|182435700|ref|YP_001823419.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|238689009|sp|B1VYY1.1|FPG_STRGG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|178464216|dbj|BAG18736.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] Length=286 Score = 311 bits (798), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 172/292 (59%), Positives = 202/292 (70%), Gaps = 13/292 (4%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL+ V+GRT++EV V HPRAVRRH AG D ARL GAR RRG Sbjct 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLL--GAVPCAAHVRISALLDD--GTVLSFA 116 KYLW+ ++ A +L+ HLGMSGQ+L+ P H+RI DD GT L F Sbjct 61 KYLWVPIDEASA------SLLGHLGMSGQLLVRPADAPDEKHLRIRMRFDDALGTELRFV 114 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGG L T DG +P +AH+ARDPLDP FD A LR + + +KR LLDQ Sbjct 115 DQRTFGG-LSLHANTPDG--LPETIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQ 171 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 ++SG+GNIYADEALWRA+++ ATL R +L A DVM ALA+GGTSFDSLY Sbjct 172 SLISGVGNIYADEALWRARLHYDRPTATLTRPRSAELLGHARDVMNAALAQGGTSFDSLY 231 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNVNGESGYF+RSLDAYGREGE C RCG +RR +MNRSS+YCPRCQ PR Sbjct 232 VNVNGESGYFDRSLDAYGREGEPCHRCGTPMRRRAWMNRSSYYCPRCQRPPR 283 >gi|326776325|ref|ZP_08235590.1| Formamidopyrimidine-DNA glycosylase [Streptomyces cf. griseus XylebKG-1] gi|326656658|gb|EGE41504.1| Formamidopyrimidine-DNA glycosylase [Streptomyces griseus XylebKG-1] Length=286 Score = 311 bits (797), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 172/292 (59%), Positives = 202/292 (70%), Gaps = 13/292 (4%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL+ V+GRT++EV V HPRAVRRH AG D ARL GAR RRG Sbjct 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLL--GAVPCAAHVRISALLDD--GTVLSFA 116 KYLW+ ++ A +L+ HLGMSGQ+L+ P H+RI DD GT L F Sbjct 61 KYLWVPIDEASA------SLLGHLGMSGQLLVRPADAPDEKHLRIRMRFDDALGTELRFV 114 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGG L T DG +P +AH+ARDPLDP FD A LR + + +KR LLDQ Sbjct 115 DQRTFGG-LSLHANTPDG--LPDTIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQ 171 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 ++SG+GNIYADEALWRA+++ ATL R +L A DVM ALA+GGTSFDSLY Sbjct 172 SLISGVGNIYADEALWRARLHYDRPTATLTRPRSAELLGHARDVMNAALAQGGTSFDSLY 231 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNVNGESGYF+RSLDAYGREGE C RCG +RR +MNRSS+YCPRCQ PR Sbjct 232 VNVNGESGYFDRSLDAYGREGEPCHRCGTPMRRRAWMNRSSYYCPRCQRPPR 283 >gi|302554408|ref|ZP_07306750.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302472026|gb|EFL35119.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length=286 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 171/292 (59%), Positives = 198/292 (68%), Gaps = 13/292 (4%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGLQ V RT+ E V HPRAVRRH AG D RL+G RI RRG Sbjct 1 MPELPEVEVVRRGLQRWVAHRTVAETEVLHPRAVRRHLAGADDFAHRLKGHRIGTPSRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLG--AVPCAAHVRISALLDDG--TVLSFA 116 KYLWL L TD +++ HLGMSGQ+L+ P H+RI D T L F Sbjct 61 KYLWLPLED------TDQSILAHLGMSGQLLVQPHTAPDEKHLRIRVRFTDALDTELRFV 114 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGG L D T DG +P +AH+ARDPLD FD +A + LRRK S +KR LLDQ Sbjct 115 DQRTFGGLSLHD-NTPDG--LPDVIAHIARDPLDEFFDDEAFHRALRRKRSTIKRALLDQ 171 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 ++SG+GNIYADEALWRA+++ ATL R ++L DVM ALA GGTSFDSLY Sbjct 172 SLISGVGNIYADEALWRARLHYERPTATLTRPRTLSLLGHVRDVMNAALAVGGTSFDSLY 231 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNVNGESGYF+RSLDAYGREG CRRCG +RR +MNRSS+YCP+CQ PR Sbjct 232 VNVNGESGYFDRSLDAYGREGLPCRRCGTPMRRRPWMNRSSYYCPKCQRPPR 283 >gi|21223929|ref|NP_629708.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|289768865|ref|ZP_06528243.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|7531122|sp|Q9ZBQ6.3|FPG_STRCO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|4007732|emb|CAA22416.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|289699064|gb|EFD66493.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] Length=286 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 168/292 (58%), Positives = 197/292 (68%), Gaps = 13/292 (4%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL+ RT+ +V V HPRAVRRH AGP D RL+ RI RRG Sbjct 1 MPELPEVEVVRRGLERWAAHRTVADVEVLHPRAVRRHVAGPDDFAHRLKDHRIGTPSRRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGA--VPCAAHVRISALLDD--GTVLSFA 116 KYLWL L TD A++ HLGMSGQ+L+ P H+RI D GT L F Sbjct 61 KYLWLPLED------TDQAVLAHLGMSGQLLVQPHETPAEKHLRIRVRFADALGTELRFV 114 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGG L D + DG +P +AH+ARDPLDP FD +A LRRK + +KR LLDQ Sbjct 115 DQRTFGGLSLHD-TSADG--LPDVIAHIARDPLDPLFDDEAFHHALRRKRTTIKRALLDQ 171 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 ++SG+GNIYADEALWRA+++ ATL R +L DVM ALA GGTSFDSLY Sbjct 172 SLISGVGNIYADEALWRARLHYERPTATLTRPRTTELLGHVRDVMNAALAVGGTSFDSLY 231 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNVNGESGYF+RSLDAYGREG CRRC +RR +MNRSS++CP+CQ PR Sbjct 232 VNVNGESGYFDRSLDAYGREGMPCRRCATPMRRRPWMNRSSYFCPKCQRPPR 283 >gi|254392459|ref|ZP_05007639.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces clavuligerus ATCC 27064] gi|197706126|gb|EDY51938.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces clavuligerus ATCC 27064] Length=286 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 172/290 (60%), Positives = 202/290 (70%), Gaps = 14/290 (4%) Query 4 LPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRGKYL 63 +PEVEVVRRGLQ V+GRTI EVRV HPRAVRRH AG D ARL+G + RRGKYL Sbjct 1 MPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRGKYL 60 Query 64 WLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCA--AHVRISALLDD--GTVLSFADQR 119 WL L TD++++ HLGMSGQ+L+ A H+RI DD GT L F DQR Sbjct 61 WLPLAD------TDSSVLGHLGMSGQLLVQPEDAADEKHLRIRISFDDSLGTELRFVDQR 114 Query 120 TFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVV 179 TFGG L D T DG +P +AH+ARDPLDP FD DA LR K + +KR LLDQ ++ Sbjct 115 TFGGLSLHD-NTPDG--LPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRALLDQSLI 171 Query 180 SGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNV 239 SG+GNIYADEALWRA+++ A+L R +L DVM ALA GGTSFDSLYVNV Sbjct 172 SGVGNIYADEALWRARLHYERPTASLTRPRSAELLGHIRDVMNAALAAGGTSFDSLYVNV 231 Query 240 NGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK 289 NGESGYF+RSLDAYGREGE CRRCG +RR +MNRSS++CPRCQ RP + Sbjct 232 NGESGYFDRSLDAYGREGEPCRRCGTPMRRRPWMNRSSYFCPRCQ-RPSR 280 >gi|329936741|ref|ZP_08286448.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] gi|329303971|gb|EGG47854.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] Length=293 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 168/292 (58%), Positives = 198/292 (68%), Gaps = 13/292 (4%) Query 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 MPELPEVEVVRRGL V RT+ V V HPRAVRRH AG + RL G R+ RRG Sbjct 1 MPELPEVEVVRRGLTRWVAHRTVAAVEVLHPRAVRRHLAGGENFAQRLTGHRLGAPARRG 60 Query 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGA--VPCAAHVRISALLDD--GTVLSFA 116 KYLWL L TD A++ HLGMSGQ+L+ P H+RI +D GT L F Sbjct 61 KYLWLPLED------TDEAVLAHLGMSGQLLVQPHEAPTEKHLRIRVRFEDALGTELRFV 114 Query 117 DQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQ 176 DQRTFGG L D T DG +P +AH+ARDPLDP FD +A + LRRK + +KR LLDQ Sbjct 115 DQRTFGGLSLHD-TTPDG--LPDVIAHIARDPLDPLFDEEAFHRALRRKRTTVKRALLDQ 171 Query 177 RVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLY 236 ++SG+GNIYADEALWR++++ ATL R +L DVM ALA GGTSFDSLY Sbjct 172 SLISGVGNIYADEALWRSRLHYERPTATLTRPRTTELLGHVRDVMNAALAVGGTSFDSLY 231 Query 237 VNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPR 288 VNVNGESGYF+RSLDAYGRE CRRCG +RR +MNRSS++CP+CQP PR Sbjct 232 VNVNGESGYFDRSLDAYGREDLPCRRCGTPMRRRPWMNRSSYFCPKCQPAPR 283 Lambda K H 0.324 0.138 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 470845709104 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40