BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2938
Length=276
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610075|ref|NP_217454.1| daunorubicin-DIM-transport integral... 541 6e-152
gi|339295777|gb|AEJ47888.1| daunorubicin-DIM-transport integral ... 478 3e-133
gi|240169606|ref|ZP_04748265.1| putative daunorubicin-DIM-transp... 474 9e-132
gi|15828266|ref|NP_302529.1| antibiotic resistance membrane prot... 439 3e-121
gi|118617590|ref|YP_905922.1| daunorubicin-DIM-transport integra... 412 2e-113
gi|183981782|ref|YP_001850073.1| daunorubicin-DIM-transport inte... 410 1e-112
gi|467208|gb|AAA17365.1| drrC [Mycobacterium leprae] 367 1e-99
gi|108799795|ref|YP_639992.1| daunorubicin resistance protein C ... 256 4e-66
gi|315444305|ref|YP_004077184.1| ABC transporter efflux protein,... 246 2e-63
gi|145223973|ref|YP_001134651.1| multidrug ABC transporter inner... 244 7e-63
gi|54023075|ref|YP_117317.1| putative ABC transporter membrane p... 242 4e-62
gi|120404099|ref|YP_953928.1| multidrug ABC transporter inner me... 236 3e-60
gi|54026082|ref|YP_120324.1| putative ABC transporter [Nocardia ... 217 1e-54
gi|312140924|ref|YP_004008260.1| ABC transporter transmembrane p... 216 3e-54
gi|226305331|ref|YP_002765289.1| ABC transporter permease protei... 211 8e-53
gi|229489448|ref|ZP_04383311.1| ABC drug resistance transporter,... 209 2e-52
gi|226365590|ref|YP_002783373.1| ABC transporter permease protei... 208 6e-52
gi|54022695|ref|YP_116937.1| putative ABC transporter membrane p... 208 7e-52
gi|111023091|ref|YP_706063.1| multidrug ABC transporter permease... 205 6e-51
gi|333918137|ref|YP_004491718.1| putative ABC transporter permea... 192 6e-47
gi|343928126|ref|ZP_08767583.1| putative ABC transporter permeas... 187 2e-45
gi|343927763|ref|ZP_08767231.1| putative ABC transporter permeas... 170 3e-40
gi|336458157|gb|EGO37140.1| ABC-type multidrug transport system,... 169 6e-40
gi|118465128|ref|YP_881223.1| ABC transporter [Mycobacterium avi... 167 1e-39
gi|262203606|ref|YP_003274814.1| ABC transporter [Gordonia bronc... 166 4e-39
gi|254774722|ref|ZP_05216238.1| ABC-2 type transporter [Mycobact... 161 1e-37
gi|342857523|ref|ZP_08714179.1| ABC transporter [Mycobacterium c... 161 1e-37
gi|326385087|ref|ZP_08206757.1| ABC-2 type transporter [Gordonia... 160 2e-37
gi|254821611|ref|ZP_05226612.1| ABC-2 type transporter [Mycobact... 159 6e-37
gi|262200665|ref|YP_003271873.1| ABC transporter [Gordonia bronc... 154 2e-35
gi|296164395|ref|ZP_06846970.1| DrrC protein [Mycobacterium para... 150 2e-34
gi|187761563|dbj|BAG31984.1| daunorubicin resistance protein C [... 141 1e-31
gi|41407334|ref|NP_960170.1| DrrC [Mycobacterium avium subsp. pa... 138 9e-31
gi|254775701|ref|ZP_05217217.1| DrrC [Mycobacterium avium subsp.... 138 1e-30
gi|4416480|gb|AAD20380.1| daunorubicin resistance protein C [Myc... 137 2e-30
gi|342858818|ref|ZP_08715473.1| daunorubicin resistance protein ... 136 4e-30
gi|118462417|ref|YP_882434.1| daunorubicin resistance protein C ... 135 5e-30
gi|124001479|dbj|BAF45370.1| daunorubicin resistance protein C [... 134 1e-29
gi|168479947|dbj|BAG11535.1| daunorubicin resistance protein C [... 133 3e-29
gi|296141985|ref|YP_003649227.1| ABC-2 type transporter [Tsukamu... 129 5e-28
gi|213019973|dbj|BAG84181.1| daunorubicin resistance protein C [... 127 1e-27
gi|254819602|ref|ZP_05224603.1| daunorubicin resistance protein ... 122 4e-26
gi|336457970|gb|EGO36958.1| daunorubicin resistance protein C [M... 116 4e-24
gi|108800073|ref|YP_640270.1| ABC-2 type transporter [Mycobacter... 107 3e-21
gi|288918488|ref|ZP_06412839.1| ABC-2 type transporter [Frankia ... 102 8e-20
gi|86740179|ref|YP_480579.1| hypothetical protein Francci3_1473 ... 100 3e-19
gi|111221709|ref|YP_712503.1| putative integral membrane transpo... 97.8 2e-18
gi|312196784|ref|YP_004016845.1| ABC transporter [Frankia sp. Eu... 97.1 3e-18
gi|117927549|ref|YP_872100.1| ABC-2 type transporter [Acidotherm... 96.3 5e-18
gi|336178138|ref|YP_004583513.1| ABC-2 type transporter [Frankia... 95.9 6e-18
>gi|15610075|ref|NP_217454.1| daunorubicin-DIM-transport integral membrane protein ABC transporter
DrrC [Mycobacterium tuberculosis H37Rv]
gi|15842484|ref|NP_337521.1| antibiotic resistance ABC transporter, efflux protein [Mycobacterium
tuberculosis CDC1551]
gi|31794115|ref|NP_856608.1| daunorubicin-DIM-transport integral membrane protein ABC transporter
DrrC [Mycobacterium bovis AF2122/97]
80 more sequence titles
Length=276
Score = 541 bits (1393), Expect = 6e-152, Method: Compositional matrix adjust.
Identities = 276/276 (100%), Positives = 276/276 (100%), Gaps = 0/276 (0%)
Query 1 MITTTSQEIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMV 60
MITTTSQEIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMV
Sbjct 1 MITTTSQEIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMV 60
Query 61 VLNIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVH 120
VLNIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVH
Sbjct 61 VLNIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVH 120
Query 121 RASGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVT 180
RASGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVT
Sbjct 121 RASGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVT 180
Query 181 TVALYTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAM 240
TVALYTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAM
Sbjct 181 TVALYTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAM 240
Query 241 GGPVLSPMIGMLVWTAGICVVCAVPLAIGYRRASTH 276
GGPVLSPMIGMLVWTAGICVVCAVPLAIGYRRASTH
Sbjct 241 GGPVLSPMIGMLVWTAGICVVCAVPLAIGYRRASTH 276
>gi|339295777|gb|AEJ47888.1| daunorubicin-DIM-transport integral membrane protein ABC transporter
DrrC [Mycobacterium tuberculosis CCDC5079]
Length=245
Score = 478 bits (1231), Expect = 3e-133, Method: Compositional matrix adjust.
Identities = 244/245 (99%), Positives = 245/245 (100%), Gaps = 0/245 (0%)
Query 32 LQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAA 91
+QTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAA
Sbjct 1 MQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAA 60
Query 92 ITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLG 151
ITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLG
Sbjct 61 ITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLG 120
Query 152 FRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFFSTGLVP 211
FRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFFSTGLVP
Sbjct 121 FRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFFSTGLVP 180
Query 212 LNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLAIGYR 271
LNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLAIGYR
Sbjct 181 LNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLAIGYR 240
Query 272 RASTH 276
RASTH
Sbjct 241 RASTH 245
>gi|240169606|ref|ZP_04748265.1| putative daunorubicin-DIM-transport integral membrane protein
ABC transporter [Mycobacterium kansasii ATCC 12478]
Length=273
Score = 474 bits (1219), Expect = 9e-132, Method: Compositional matrix adjust.
Identities = 236/272 (87%), Positives = 253/272 (94%), Gaps = 0/272 (0%)
Query 5 TSQEIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNI 64
T+QE+ LAP R +N+ RL + QTLLQT RLL RWARDY+TVIGAIVLPILFMVVLNI
Sbjct 2 TTQEVGLAPARSQDPENSVRLLIEQTLLQTKRLLIRWARDYVTVIGAIVLPILFMVVLNI 61
Query 65 VLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASG 124
VLGNLAY VTHDSGLYSIVPLI++GAAITGSTFVAIDLMRERS GLL+RLWV+PVHRASG
Sbjct 62 VLGNLAYAVTHDSGLYSIVPLISIGAAITGSTFVAIDLMRERSMGLLSRLWVVPVHRASG 121
Query 125 LISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVAL 184
LI+RILANAIRTL TTLVMLGTGVVLGFRFRQG+I SLMW+SVPVILGIAIAA+VTTVAL
Sbjct 122 LIARILANAIRTLFTTLVMLGTGVVLGFRFRQGMIASLMWVSVPVILGIAIAAIVTTVAL 181
Query 185 YTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPV 244
YTAQTVVVEGVELVQAIAIFFSTGLVPLNSYP WIQP VAHQPVSYAIAAMRG+AMGGPV
Sbjct 182 YTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPSWIQPVVAHQPVSYAIAAMRGYAMGGPV 241
Query 245 LSPMIGMLVWTAGICVVCAVPLAIGYRRASTH 276
LSPMIGML+WT GICV CAVP+AIGYRRASTH
Sbjct 242 LSPMIGMLLWTIGICVACAVPMAIGYRRASTH 273
>gi|15828266|ref|NP_302529.1| antibiotic resistance membrane protein [Mycobacterium leprae
TN]
gi|221230743|ref|YP_002504159.1| putative antibiotic resistance membrane protein [Mycobacterium
leprae Br4923]
gi|13093959|emb|CAC31866.1| probable antibiotic resistance membrane protein [Mycobacterium
leprae]
gi|219933850|emb|CAR72448.1| probable antibiotic resistance membrane protein [Mycobacterium
leprae Br4923]
Length=276
Score = 439 bits (1128), Expect = 3e-121, Method: Compositional matrix adjust.
Identities = 218/276 (79%), Positives = 239/276 (87%), Gaps = 0/276 (0%)
Query 1 MITTTSQEIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMV 60
MIT SQ + L P L N+ R V+QTLLQT RLLTRWARDY+T+IGA+VLPILF+V
Sbjct 1 MITMISQTVGLVPASLQYPNNSVRALVSQTLLQTKRLLTRWARDYVTIIGALVLPILFLV 60
Query 61 VLNIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVH 120
VLNIVLGNLAYVVT+DSGLYS VPLI LGAAITGSTFVAIDL+RERS GLL+RLWVLP+H
Sbjct 61 VLNIVLGNLAYVVTYDSGLYSFVPLITLGAAITGSTFVAIDLVRERSIGLLSRLWVLPIH 120
Query 121 RASGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVT 180
RASGL++RILAN IRT VTTLVML TGV+LGFRFRQG+I SLMW+SVPVI GIAIA MVT
Sbjct 121 RASGLLARILANTIRTFVTTLVMLVTGVILGFRFRQGVIASLMWVSVPVIFGIAIAVMVT 180
Query 181 TVALYTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAM 240
TVALYT QT VVE VELVQAIA+F STGLVPLN YPGWIQP VAHQPVSYAIAAMRG +M
Sbjct 181 TVALYTEQTFVVEAVELVQAIAVFLSTGLVPLNQYPGWIQPLVAHQPVSYAIAAMRGLSM 240
Query 241 GGPVLSPMIGMLVWTAGICVVCAVPLAIGYRRASTH 276
GGPVL+ M+ MLVWTAGIC CAVPL +GYRRA TH
Sbjct 241 GGPVLASMVAMLVWTAGICASCAVPLGVGYRRACTH 276
>gi|118617590|ref|YP_905922.1| daunorubicin-DIM-transport integral membrane protein ABC transporter
DrrC [Mycobacterium ulcerans Agy99]
gi|118569700|gb|ABL04451.1| daunorubicin-DIM-transport integral membrane protein ABC transporter
DrrC [Mycobacterium ulcerans Agy99]
Length=276
Score = 412 bits (1060), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 200/276 (73%), Positives = 236/276 (86%), Gaps = 0/276 (0%)
Query 1 MITTTSQEIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMV 60
MI TSQEI AP + + ++ARL + QTL+QT R+LTRW+RD++T+I A+V PILFM+
Sbjct 1 MIGMTSQEIAFAPAQSQHTDHSARLLIWQTLVQTQRILTRWSRDFVTLIEALVFPILFML 60
Query 61 VLNIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVH 120
VL IVLGNL Y VTH +YSIVPLIALGAAITGS FVAIDLMRER+ GLL+RLWVLPVH
Sbjct 61 VLKIVLGNLIYAVTHHDAMYSIVPLIALGAAITGSAFVAIDLMRERTSGLLSRLWVLPVH 120
Query 121 RASGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVT 180
R SGL++RILA+A+R L TTLVMLG G+++GF FRQGLI SLMW+ VPV LGIA A MVT
Sbjct 121 RMSGLMARILADAVRILFTTLVMLGVGILMGFEFRQGLIASLMWLCVPVTLGIAFAVMVT 180
Query 181 TVALYTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAM 240
TVALY++Q V+VEGVEL QAIAIFFSTGL+PL+ YP WIQP VAHQPVSYA++AMRG +M
Sbjct 181 TVALYSSQAVIVEGVELTQAIAIFFSTGLIPLDQYPHWIQPVVAHQPVSYAVSAMRGLSM 240
Query 241 GGPVLSPMIGMLVWTAGICVVCAVPLAIGYRRASTH 276
GGPVL PMIG+L+WTAGIC VCAVPLA+G+RRASTH
Sbjct 241 GGPVLLPMIGVLLWTAGICAVCAVPLAVGWRRASTH 276
>gi|183981782|ref|YP_001850073.1| daunorubicin-DIM-transport integral membrane protein ABC transporter
DrrC [Mycobacterium marinum M]
gi|183175108|gb|ACC40218.1| daunorubicin-DIM-transport integral membrane protein ABC transporter
DrrC [Mycobacterium marinum M]
Length=273
Score = 410 bits (1054), Expect = 1e-112, Method: Compositional matrix adjust.
Identities = 198/272 (73%), Positives = 234/272 (87%), Gaps = 0/272 (0%)
Query 5 TSQEIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNI 64
TSQEI AP + + ++ARL + QTL+QT R+LTRW+RD++T+I A+V PILFM+VL I
Sbjct 2 TSQEIAFAPAQSQHTDHSARLLIWQTLVQTQRILTRWSRDFVTLIEALVFPILFMLVLKI 61
Query 65 VLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASG 124
VLGNL Y VTH +YSIVPLIALGAAITGS FVAIDLMRER+ GLL+RLWVLPVHR SG
Sbjct 62 VLGNLIYAVTHHDAMYSIVPLIALGAAITGSAFVAIDLMRERTSGLLSRLWVLPVHRMSG 121
Query 125 LISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVAL 184
L++RILA+A+R L TTLVMLG G+++GF FRQGLI SLMW+ VPV LGIA A MVTTVAL
Sbjct 122 LMARILADAVRILFTTLVMLGVGILMGFEFRQGLIASLMWLCVPVTLGIAFAVMVTTVAL 181
Query 185 YTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPV 244
Y++Q V+VEGVEL QAIAIFFSTGL+PL+ YP WIQP VAHQPVSYA++AMRG +MGGPV
Sbjct 182 YSSQAVIVEGVELTQAIAIFFSTGLIPLDQYPHWIQPVVAHQPVSYAVSAMRGLSMGGPV 241
Query 245 LSPMIGMLVWTAGICVVCAVPLAIGYRRASTH 276
L PMIG+L+WTAGIC VCAVPLA+G+RRASTH
Sbjct 242 LLPMIGVLLWTAGICAVCAVPLAVGWRRASTH 273
>gi|467208|gb|AAA17365.1| drrC [Mycobacterium leprae]
Length=244
Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/242 (77%), Positives = 205/242 (85%), Gaps = 0/242 (0%)
Query 1 MITTTSQEIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMV 60
MIT SQ + L P L N+ R V+QTLLQT RLLTRWARDY+T+IGA+VLPILF+V
Sbjct 1 MITMISQTVGLVPASLQYPNNSVRALVSQTLLQTKRLLTRWARDYVTIIGALVLPILFLV 60
Query 61 VLNIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVH 120
VLNIVLGNLAYVVT+DSGLYS VPLI LGAAITGSTFVAIDL+RERS GLL+RLWVLP+H
Sbjct 61 VLNIVLGNLAYVVTYDSGLYSFVPLITLGAAITGSTFVAIDLVRERSIGLLSRLWVLPIH 120
Query 121 RASGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVT 180
RASGL++RILAN IRT VTTLVML TGV+LGFRFRQG+I SLMW+SVPVI GIAIA MVT
Sbjct 121 RASGLLARILANTIRTFVTTLVMLVTGVILGFRFRQGVIASLMWVSVPVIFGIAIAVMVT 180
Query 181 TVALYTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAM 240
TVALYT QT VVE VELVQAIA+F STGLVPLN YPGWIQP VAHQPVSYA+ +
Sbjct 181 TVALYTEQTFVVEAVELVQAIAVFLSTGLVPLNQYPGWIQPLVAHQPVSYALRRCADYRW 240
Query 241 GG 242
GG
Sbjct 241 GG 242
>gi|108799795|ref|YP_639992.1| daunorubicin resistance protein C [Mycobacterium sp. MCS]
gi|119868905|ref|YP_938857.1| daunorubicin resistance ABC transporter inner membrane subunit
C [Mycobacterium sp. KMS]
gi|126435438|ref|YP_001071129.1| daunorubicin resistance ABC transporter inner membrane subunit
C [Mycobacterium sp. JLS]
gi|108770214|gb|ABG08936.1| daunorubicin resistance protein C [Mycobacterium sp. MCS]
gi|119694994|gb|ABL92067.1| daunorubicin resistance ABC transporter, inner membrane subunit
C [Mycobacterium sp. KMS]
gi|126235238|gb|ABN98638.1| daunorubicin resistance ABC transporter, inner membrane subunit
C [Mycobacterium sp. JLS]
Length=287
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 123/272 (46%), Positives = 179/272 (66%), Gaps = 0/272 (0%)
Query 3 TTTSQEIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVL 62
+T QE P +N+ R +QT RLL R+ RD +T +V PI ++VL
Sbjct 13 STILQEDSFPKINRPRRENSPRTLFPHAWVQTKRLLMRFLRDPMTFFFGVVFPIFMLLVL 72
Query 63 NIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRA 122
+IVLG+ VT +S +Y VPL+ + A+ G++ A+ ++ E++ G+LARLWV P+HRA
Sbjct 73 DIVLGDAISAVTGNSAVYGSVPLMTVIGAMNGASVGAVGIIAEQNDGMLARLWVTPIHRA 132
Query 123 SGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTV 182
SGL++RI A A+R ++ ++++L G LG RF QG+ ++ W+ VPV+ G+A A +V TV
Sbjct 133 SGLLARITAEALRVVINSVLLLAVGFALGLRFEQGIPAAVAWVCVPVLFGVAFAILVLTV 192
Query 183 ALYTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGG 242
ALY +V + LV ++ +FFS+G VPLN YP W+QP V HQPVSYAI MRG ++GG
Sbjct 193 ALYWPSPTMVNAIVLVNSLCLFFSSGFVPLNQYPSWVQPAVEHQPVSYAIETMRGLSLGG 252
Query 243 PVLSPMIGMLVWTAGICVVCAVPLAIGYRRAS 274
PVL P IG+L W+ GI + C +P+ IGYR+AS
Sbjct 253 PVLEPGIGILAWSGGIILACLIPMVIGYRKAS 284
>gi|315444305|ref|YP_004077184.1| ABC transporter efflux protein, DrrB family [Mycobacterium sp.
Spyr1]
gi|315262608|gb|ADT99349.1| ABC transporter efflux protein, DrrB family [Mycobacterium sp.
Spyr1]
Length=281
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/257 (49%), Positives = 183/257 (72%), Gaps = 0/257 (0%)
Query 20 QNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGL 79
+N+ R V Q + T R+L RW+RD T++ ++V+P +F++ L+IVLG++ VT SGL
Sbjct 24 ENSPRQLVPQVAVLTGRILRRWSRDPATLVQSMVMPAVFLIALDIVLGDVIEAVTGHSGL 83
Query 80 YSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVT 139
Y VPL+AL +TGS A+ +MRER GLL+RLWV+PVHRA+GL++R+ A+ IR
Sbjct 84 YGQVPLVALVGGMTGSIIGAVGIMRERDAGLLSRLWVVPVHRAAGLLARLAADFIRITAI 143
Query 140 TLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQ 199
TLV++ G+VLGFRF QG+ ++ W+ +P + G+ ++A V T+AL+++ T+ + E++
Sbjct 144 TLVVMSVGLVLGFRFEQGIPAAIAWVFMPALFGVTLSAAVLTLALFSSSTIAPQATEILI 203
Query 200 AIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGIC 259
AI +FFS G VPL+ YP W+QPFV HQPVS I AM+G ++ GP+ P++ ++W AGI
Sbjct 204 AILMFFSIGFVPLDQYPEWLQPFVEHQPVSTTIEAMKGLSLEGPIAQPVLFSVLWAAGIA 263
Query 260 VVCAVPLAIGYRRASTH 276
VCAVPLAIGYRRAS
Sbjct 264 AVCAVPLAIGYRRASKR 280
>gi|145223973|ref|YP_001134651.1| multidrug ABC transporter inner membrane protein [Mycobacterium
gilvum PYR-GCK]
gi|145216459|gb|ABP45863.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Mycobacterium
gilvum PYR-GCK]
Length=281
Score = 244 bits (624), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/257 (49%), Positives = 182/257 (71%), Gaps = 0/257 (0%)
Query 20 QNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGL 79
+N+ R V Q + T R+L RW+RD T++ ++V+P +F++ L+IVLG++ VT SGL
Sbjct 24 ENSPRQLVPQVAVLTGRILRRWSRDPATLVQSMVMPAVFLIALDIVLGDVIEAVTGHSGL 83
Query 80 YSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVT 139
Y VPL+AL +TGS A+ +MRER GLL+RLWV+PVHRA+GL++R+ A+ IR
Sbjct 84 YGQVPLVALVGGMTGSIIGAVGIMRERDAGLLSRLWVVPVHRAAGLLARLAADFIRITAI 143
Query 140 TLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQ 199
TLV++ G+VLGFRF QG+ ++ W+ +P + G+ ++A V T+AL ++ T+ + E++
Sbjct 144 TLVVMSVGLVLGFRFEQGIPAAIAWVFMPALFGVTLSAAVLTLALLSSSTIAPQATEILI 203
Query 200 AIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGIC 259
AI +FFS G VPL+ YP W+QPFV HQPVS I AM+G ++ GP+ P++ ++W AGI
Sbjct 204 AILMFFSIGFVPLDQYPEWLQPFVEHQPVSTTIEAMKGLSLEGPIAQPVLFSVLWAAGIA 263
Query 260 VVCAVPLAIGYRRASTH 276
VCAVPLAIGYRRAS
Sbjct 264 AVCAVPLAIGYRRASKR 280
>gi|54023075|ref|YP_117317.1| putative ABC transporter membrane protein [Nocardia farcinica
IFM 10152]
gi|54014583|dbj|BAD55953.1| putative ABC transporter membrane protein [Nocardia farcinica
IFM 10152]
Length=269
Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/255 (47%), Positives = 175/255 (69%), Gaps = 0/255 (0%)
Query 20 QNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGL 79
+N+ A +QT RLL RW+R + ++ +++P L + +L+ V+G D L
Sbjct 13 ENSPITLAANVSVQTQRLLLRWSRSPVALLETLIIPCLLLFMLDTVVGGQIQKFAGDDAL 72
Query 80 YSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVT 139
Y VP++A+ A++G+ + L RER GLLAR WVLPVHRASGL++R+LA R L+
Sbjct 73 YGSVPMVAVVGALSGAVAGGVMLGRERDDGLLARFWVLPVHRASGLVARVLAEGCRILLG 132
Query 140 TLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQ 199
TLV++G G +LGFRF QG+ +L +++VPV+ G+A A +VT VA+YTA+ +VEGV ++
Sbjct 133 TLVVVGVGYLLGFRFHQGVPAALAFVAVPVLFGLAFATLVTAVAVYTAKAALVEGVAILS 192
Query 200 AIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGIC 259
++ +FFSTG VPL +YP WIQP V +QP+S A+ AM+ ++GGP+ P+ ++W+ GI
Sbjct 193 SLLMFFSTGFVPLIAYPEWIQPVVRNQPMSAAVDAMKALSLGGPLADPLTRTVLWSLGII 252
Query 260 VVCAVPLAIGYRRAS 274
VCAVP AIGYRRAS
Sbjct 253 AVCAVPAAIGYRRAS 267
>gi|120404099|ref|YP_953928.1| multidrug ABC transporter inner membrane protein [Mycobacterium
vanbaalenii PYR-1]
gi|119956917|gb|ABM13922.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Mycobacterium
vanbaalenii PYR-1]
Length=284
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/257 (48%), Positives = 186/257 (73%), Gaps = 0/257 (0%)
Query 20 QNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGL 79
+N+ + V Q + T R+L RW+RD T++ ++V+P +F+V L+IVLG++ VT SGL
Sbjct 27 ENSPKRLVPQVAVLTGRILRRWSRDPATLVQSLVMPAVFLVALDIVLGDVIEQVTGHSGL 86
Query 80 YSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVT 139
Y VPL+AL +TG+ A+ +MRER GLL+R WV+PVHRA+GL++R+ A+ +R +V
Sbjct 87 YGQVPLVALVGGMTGAIIGAVGIMREREAGLLSRFWVVPVHRAAGLLARLAADFVRIVVI 146
Query 140 TLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQ 199
TLV++ G+ LGFRF QG++ +++W+ +P + G+A++A V T+AL+++ T+ + E+V
Sbjct 147 TLVVMVVGLALGFRFEQGILAAVVWVFMPALFGVALSAAVLTLALFSSSTIAPQATEIVI 206
Query 200 AIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGIC 259
AI +FFS G VPL+ YP W+QPFV HQPVS I AM+G ++ GP+ P++ ++W AGI
Sbjct 207 AILMFFSIGFVPLDQYPKWLQPFVEHQPVSTTIKAMKGLSLEGPIAQPVLLSVLWAAGIA 266
Query 260 VVCAVPLAIGYRRASTH 276
VCAVPLAIG+R+AS
Sbjct 267 AVCAVPLAIGFRKASKR 283
>gi|54026082|ref|YP_120324.1| putative ABC transporter [Nocardia farcinica IFM 10152]
gi|54017590|dbj|BAD58960.1| putative ABC transporter [Nocardia farcinica IFM 10152]
Length=274
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/258 (46%), Positives = 161/258 (63%), Gaps = 0/258 (0%)
Query 13 PTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYV 72
P + G L Q++L T RLL R ARD TV+ +V P ++VLN V G
Sbjct 5 PPVVTGPTETVALLGGQSVLHTRRLLLRVARDPQTVVATVVFPAGLLMVLNAVTGRQVSA 64
Query 73 VTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILAN 132
S LY VP++AL AA++GS A+ L RER GL AR WVLPVHR + ++R+LA
Sbjct 65 FAGASALYGTVPMVALVAAMSGSVAGAVALGRERDAGLPARFWVLPVHRGADPLARLLAE 124
Query 133 AIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVV 192
A R LV T VM+ GV+LGFRF+QG++ +++++VP++ G+ A MV A+ T +T V
Sbjct 125 AARILVATAVMVIVGVLLGFRFQQGVLAGVVFLAVPLVFGLGFATMVFAAAMVTTRTAFV 184
Query 193 EGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGML 252
E V L+ ++ +FFSTG VPL +YP W +P VAHQP++ AI AMRG ++GGPV P++ L
Sbjct 185 EAVSLLSSLLMFFSTGFVPLAAYPAWARPLVAHQPLTQAIDAMRGLSLGGPVRGPLLATL 244
Query 253 VWTAGICVVCAVPLAIGY 270
W+ G V A P GY
Sbjct 245 AWSVGAFAVFAGPALRGY 262
>gi|312140924|ref|YP_004008260.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
gi|325675438|ref|ZP_08155122.1| antibiotic resistance ABC superfamily ATP binding cassette transporter,
permease protein [Rhodococcus equi ATCC 33707]
gi|311890263|emb|CBH49581.1| putative ABC-2 type transporter integral membrane subunit [Rhodococcus
equi 103S]
gi|325553409|gb|EGD23087.1| antibiotic resistance ABC superfamily ATP binding cassette transporter,
permease protein [Rhodococcus equi ATCC 33707]
Length=290
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/266 (43%), Positives = 164/266 (62%), Gaps = 0/266 (0%)
Query 9 IELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGN 68
I+ P +++ + + +Q RLL RW+RD T+I A++ P L +V+ IV+GN
Sbjct 22 IDFPPPTEAWPESSPKALWVHSTVQCRRLLKRWSRDPSTMIQALLYPALTLVMFRIVIGN 81
Query 69 LAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISR 128
T +Y VP+I L A+ GS A+ L ER GLL+R W LP+HRA+GL+ R
Sbjct 82 TVTAATGQPAVYGQVPMIILIGAMFGSIVSAVGLRAERKNGLLSRFWTLPIHRAAGLVGR 141
Query 129 ILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQ 188
++A A+R +TT+V+L GV LGFR QG +PS+ + +PVI G+ A MVT +A +
Sbjct 142 MMAEAVRVTITTIVILVVGVFLGFRLTQGFLPSVFLVILPVIFGMGFAMMVTALATVSGD 201
Query 189 TVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPM 248
+VE V + + +FF++G VP+ +YP W+QP VA QP+S AI AMRG AMGGP+L P+
Sbjct 202 APLVELVSIGCTLLMFFNSGFVPVMAYPTWLQPVVAAQPMSCAIDAMRGLAMGGPILEPV 261
Query 249 IGMLVWTAGICVVCAVPLAIGYRRAS 274
+ L W+ G+ V P GYRRA+
Sbjct 262 LQTLAWSFGMMAVFVYPAIKGYRRAA 287
>gi|226305331|ref|YP_002765289.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
gi|226184446|dbj|BAH32550.1| putative ABC transporter permease protein [Rhodococcus erythropolis
PR4]
Length=278
Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 108/255 (43%), Positives = 161/255 (64%), Gaps = 0/255 (0%)
Query 20 QNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGL 79
+N+ + V + +Q RLL W RD T I A++ P +++ +VLGN T S +
Sbjct 21 ENSFKALVVHSGIQAKRLLLTWLRDPSTAIQALIYPAFMLLMFRVVLGNSITAATGQSSI 80
Query 80 YSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVT 139
+ VPLI L A+ GS A+ L ER+ GLL+R W LP HRASGL+ R++A A+R L+T
Sbjct 81 FGTVPLIILVGAMFGSIASAVGLKGERASGLLSRFWTLPAHRASGLVGRMIAEAVRVLLT 140
Query 140 TLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQ 199
++V+LG G +LGFRF QG + + +++PVI G+ A MVT +A + +VE V +
Sbjct 141 SIVILGVGYLLGFRFNQGPLAAFAILALPVIFGVGFAMMVTALATVSDNLPLVEIVSISC 200
Query 200 AIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGIC 259
+ +FF++G VP+ +YP W+QP VA QP+S AI MRG ++GGPV P++ L+W+ G+
Sbjct 201 TLLMFFNSGFVPVMAYPKWLQPVVAEQPMSVAIDTMRGLSLGGPVAEPLVKTLLWSFGMI 260
Query 260 VVCAVPLAIGYRRAS 274
+V P GYRRA+
Sbjct 261 LVFVYPAIRGYRRAA 275
>gi|229489448|ref|ZP_04383311.1| ABC drug resistance transporter, permease component [Rhodococcus
erythropolis SK121]
gi|229323545|gb|EEN89303.1| ABC drug resistance transporter, permease component [Rhodococcus
erythropolis SK121]
Length=286
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/256 (43%), Positives = 162/256 (64%), Gaps = 0/256 (0%)
Query 20 QNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGL 79
+N+ V +L+Q RLL W RD T I A+V P +++ +VLGN T + +
Sbjct 29 ENSLNALVVHSLIQAKRLLITWMRDPSTTIQALVYPAFMLLMFRVVLGNSISAATGQASI 88
Query 80 YSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVT 139
+ VPLI L A+ GS A+ L E++ GLL+R W LP HRASGL+ R++A A+R LVT
Sbjct 89 FGTVPLIILVGAMFGSIASAVGLKGEQASGLLSRFWTLPAHRASGLVGRMIAEAVRVLVT 148
Query 140 TLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQ 199
++V+L G LGFRF QG + ++ +++P++ G+ A MVT +A +A +VE V +
Sbjct 149 SIVILAVGYALGFRFNQGPLAAVALLALPIVFGVGFAMMVTALATVSANLPLVEIVSISC 208
Query 200 AIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGIC 259
+ +FF++G VP+ +YP W+QP VA QP+S AI AM+G ++GGPV PMI L+W+ G+
Sbjct 209 TLLMFFNSGFVPVIAYPKWLQPIVAEQPMSVAIDAMKGLSLGGPVAEPMIKTLIWSLGMV 268
Query 260 VVCAVPLAIGYRRAST 275
V +P G+RRA+
Sbjct 269 AVFILPAIRGFRRAAE 284
>gi|226365590|ref|YP_002783373.1| ABC transporter permease protein [Rhodococcus opacus B4]
gi|226244080|dbj|BAH54428.1| putative ABC transporter permease protein [Rhodococcus opacus
B4]
Length=282
Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/260 (41%), Positives = 170/260 (66%), Gaps = 0/260 (0%)
Query 17 PGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHD 76
P ++N+ + +LLQT RLL RWARD T++ AIV P L +++ VLG T
Sbjct 21 PHAENSLAALFSHSLLQTGRLLLRWARDPYTMLQAIVYPSLMLLMFWAVLGISITKATGV 80
Query 77 SGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRT 136
+ ++ VP+I L A+ GS + L +E + GLL+R WVLPVHRASGL+SR++A ++R
Sbjct 81 NSVFGTVPMITLVGAMFGSIAGGLSLKKEWADGLLSRFWVLPVHRASGLLSRLMAESVRI 140
Query 137 LVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVE 196
++TT++++ G +GFRF QG++ + + +P++ G++ A MVT +A+ A+ +VE +
Sbjct 141 VLTTVLIIAVGFAIGFRFNQGILAGIALMLLPLLFGVSFATMVTALAVNAAKAPLVELLS 200
Query 197 LVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTA 256
L+ + +FF++G VP +YP W+QPFV +QP+S AI AM+G +MGGPV P++ + W+
Sbjct 201 LLCTLLLFFNSGFVPTGAYPTWLQPFVENQPMSCAIDAMKGLSMGGPVAEPLLKTIAWSV 260
Query 257 GICVVCAVPLAIGYRRASTH 276
G ++ P GYRRA+ +
Sbjct 261 GGLLIFTYPAVRGYRRAAGN 280
>gi|54022695|ref|YP_116937.1| putative ABC transporter membrane protein [Nocardia farcinica
IFM 10152]
gi|54014203|dbj|BAD55573.1| putative ABC transporter membrane protein [Nocardia farcinica
IFM 10152]
Length=295
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 114/274 (42%), Positives = 165/274 (61%), Gaps = 0/274 (0%)
Query 3 TTTSQEIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVL 62
T ++ PT P S+NA + +LLQ RLL W RD T I ++ P +++
Sbjct 21 TADTEGFRPLPTVRPRSENAPATWARHSLLQCKRLLIGWLRDPATTIQTLIYPAATLLMF 80
Query 63 NIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRA 122
IVLGN T +Y VP+I L AA++G+ A+ ER+ GLL R + +P++RA
Sbjct 81 KIVLGNAIGSATGMPAVYGQVPMITLVAAMSGAVVSALGFKVERATGLLGRFYTMPMNRA 140
Query 123 SGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTV 182
+GL R+LA A+R L+TTL +L G+ LGFRF QG + +L I +PV+ G+ A +VT +
Sbjct 141 AGLTGRLLAEAVRVLITTLFVLAVGLALGFRFGQGPLAALALIGIPVLFGVGFAVLVTAL 200
Query 183 ALYTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGG 242
A T ++V + +V + +FF+TG VP+ +YP W+Q VA+QP+S AI AMRG + GG
Sbjct 201 ATLTEGVLLVSIIGIVNTLLMFFNTGFVPVFAYPTWLQDVVANQPMSTAIDAMRGLSYGG 260
Query 243 PVLSPMIGMLVWTAGICVVCAVPLAIGYRRASTH 276
PV P++ L WT G+ VV A P GYRRA+
Sbjct 261 PVAEPLLKTLAWTIGLIVVFAWPAIRGYRRAAER 294
>gi|111023091|ref|YP_706063.1| multidrug ABC transporter permease [Rhodococcus jostii RHA1]
gi|110822621|gb|ABG97905.1| ABC drug resistance transporter, permease component [Rhodococcus
jostii RHA1]
Length=282
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 106/260 (41%), Positives = 168/260 (65%), Gaps = 0/260 (0%)
Query 17 PGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHD 76
P +N+ + +LLQT RLL RWARD T++ AIV P L +++ VLG T
Sbjct 21 PHPENSLAALFSHSLLQTGRLLLRWARDPYTMLQAIVYPSLMLLMFWAVLGISITKATGV 80
Query 77 SGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRT 136
+ ++ VP+I L A+ GS + L +E + GLL+R WVLPVHRASGLISR++A ++R
Sbjct 81 NSVFGTVPMITLVGAMFGSIAGGLSLKKEWADGLLSRFWVLPVHRASGLISRLMAESVRI 140
Query 137 LVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVE 196
++TT++++ G +GFRF QG++ + + +P++ G++ A MVT +A+ A+ +VE +
Sbjct 141 MLTTVLIIAVGFAIGFRFDQGILAGIALMLLPLLFGVSFATMVTALAVNAAKAPLVEILS 200
Query 197 LVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTA 256
L+ + +FF++G VP +YP W+QPFV +QP+S AI AM+G +MGGPV P++ + W+
Sbjct 201 LLCTLLLFFNSGFVPTGAYPTWLQPFVENQPMSCAIDAMKGLSMGGPVAEPLLKTIAWSL 260
Query 257 GICVVCAVPLAIGYRRASTH 276
++ P GYRRA+ +
Sbjct 261 AGLLIFTYPAVRGYRRAAGN 280
>gi|333918137|ref|YP_004491718.1| putative ABC transporter permease [Amycolicicoccus subflavus
DQS3-9A1]
gi|333480358|gb|AEF38918.1| Putative ABC transporter permease protein [Amycolicicoccus subflavus
DQS3-9A1]
Length=277
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/272 (38%), Positives = 169/272 (63%), Gaps = 4/272 (1%)
Query 3 TTTSQEIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVL 62
T T+Q EL TR S+++ FV Q+LL T RLLT W+RD +T++ A+ P + +V+L
Sbjct 8 TATTQFPELNFTR---SESSPVTFVRQSLLMTKRLLTIWSRDPLTMVQAVAYPAIMLVML 64
Query 63 NIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRA 122
+V+G +++ Y PL++L AA+ GS + +++ER G+L+R W LP+HR
Sbjct 65 WMVIGITMEGFSNEPAAYRFAPLMSLVAAMVGSIAGVVLVIQERENGVLSRYWSLPIHRG 124
Query 123 SGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTV 182
+ L R++A A+R ++TT+++L LGFR + + ++SVP++ GI A + T
Sbjct 125 ADLAGRLMAEAVRIVLTTILILIVAFPLGFRL-NSVTATFAFLSVPLMFGIGFATVATAC 183
Query 183 ALYTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGG 242
AL T + ++ ++L +FFS+G VPL ++P W QPFV +QP+S+A+ AMR A+G
Sbjct 184 ALITTKQTLIAALQLFIMFGMFFSSGFVPLQAFPSWAQPFVENQPLSHAVEAMRAIALGE 243
Query 243 PVLSPMIGMLVWTAGICVVCAVPLAIGYRRAS 274
SP+I +W+ + V+ +VP +GYRR++
Sbjct 244 DFSSPLIRCAIWSGSLVVLFSVPAIVGYRRSA 275
>gi|343928126|ref|ZP_08767583.1| putative ABC transporter permease protein [Gordonia alkanivorans
NBRC 16433]
gi|343761980|dbj|GAA14509.1| putative ABC transporter permease protein [Gordonia alkanivorans
NBRC 16433]
Length=279
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/256 (37%), Positives = 163/256 (64%), Gaps = 0/256 (0%)
Query 19 SQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSG 78
+++ R V + +Q R+L +WA D +T++ +++ P + +++ +VL + S
Sbjct 22 AESTTRALVRGSTIQAERILVKWATDPVTLLQSLLFPAIMVLMFWLVLDRSVSAHSGTSS 81
Query 79 LYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLV 138
++ +VP++AL A++G++ + L RER+ GLL ++WVLPVHRAS ++ R+LA A+R +V
Sbjct 82 VFGMVPMVALVGAMSGASISGLGLRRERTSGLLTKMWVLPVHRASAMVGRLLAEAVRVVV 141
Query 139 TTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELV 198
T +L G ++GFR G++ L + + ++ G++ + MVT +AL + + +VE V +
Sbjct 142 TVSAVLAVGTIIGFRIESGVVGYLAILGITLVFGLSFSIMVTALALLSRDSHIVEWVAIG 201
Query 199 QAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGI 258
+A+FF+TG VP SYPGW+QP V +QP+S A+ A+RG A GGP+ P++ + W+A +
Sbjct 202 TNLAMFFNTGFVPAESYPGWLQPIVEYQPLSCAVNAIRGLAAGGPIAEPLLLTVAWSAAL 261
Query 259 CVVCAVPLAIGYRRAS 274
+ P GYRRA+
Sbjct 262 LLFFTRPTLAGYRRAA 277
>gi|343927763|ref|ZP_08767231.1| putative ABC transporter permease protein [Gordonia alkanivorans
NBRC 16433]
gi|343762404|dbj|GAA14157.1| putative ABC transporter permease protein [Gordonia alkanivorans
NBRC 16433]
Length=286
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/265 (39%), Positives = 156/265 (59%), Gaps = 2/265 (0%)
Query 13 PTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYV 72
PT +P ++++ R Q++ R + + RD T++ A+V P L MV+ +VLG+
Sbjct 22 PTNVP-AESSLRALWRQSIPLAGRQIVVFVRDKPTLVQALVFPALSMVMFKVVLGDAIGS 80
Query 73 VTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILAN 132
T + Y VPL+ L A+ GS A L RERS GLLARL+VLP+HRA+ L SR+ +
Sbjct 81 ATGQNSAYGTVPLVILVGAMFGSIASATRLNRERSTGLLARLFVLPIHRAADLTSRVASE 140
Query 133 AIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTV-V 191
R LVTT+++L G ++GFRF QG ++ I V + G A A + +A+ +
Sbjct 141 LARILVTTVILLAAGHLIGFRFTQGFGSAVGLILVALAYGAAFATLTLALAVSARPGAPI 200
Query 192 VEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGM 251
V + LV ++ +FF++G P+++YP W+QP V +QP+S AI +MR A GGP+ ++ +
Sbjct 201 VPYLGLVSSLLMFFNSGFSPVSAYPTWLQPIVENQPMSPAIESMRALAAGGPLAENLVKV 260
Query 252 LVWTAGICVVCAVPLAIGYRRASTH 276
VWT I V+ P GYR+A+
Sbjct 261 AVWTVVILVISIYPALRGYRKAARD 285
>gi|336458157|gb|EGO37140.1| ABC-type multidrug transport system, permease component [Mycobacterium
avium subsp. paratuberculosis S397]
Length=548
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/250 (38%), Positives = 142/250 (57%), Gaps = 2/250 (0%)
Query 26 FVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPL 85
FV+Q+ + RLL RW RD + + A++ P L +++ +++G VT LY +VP+
Sbjct 296 FVSQSASEAGRLLRRWRRDPVVAVQALLFPTLLLIIYKLLVGKSVLAVTGHDSLYGLVPM 355
Query 86 IALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLG 145
A+ A+ G+ + L ER G+L RLWV PVHRAS + R++A A RT+ + V+
Sbjct 356 CAVVGAVFGTIGAGLALPSERESGVLTRLWVQPVHRASPVAGRLVAEAARTVASAFVLTV 415
Query 146 TGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFF 205
G+ LG RF G I L ++ VPV + +A +VT +A +V + + +F
Sbjct 416 FGIALGLRFNDGWIAMLAFVLVPVTISAGMATLVTAIAARADGKAMVTWLGAACVVLLFL 475
Query 206 STGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVP 265
+TG+ P +PGW+QP V + P+S I AMR A GGPVLSP+ +W G+ V P
Sbjct 476 NTGVAPAEVFPGWLQPVVRYSPISPTIEAMRALAQGGPVLSPLWQAGLW-GGVLVAVFAP 534
Query 266 LAI-GYRRAS 274
+A+ GYR A+
Sbjct 535 IAVRGYRAAA 544
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/232 (26%), Positives = 107/232 (47%), Gaps = 3/232 (1%)
Query 34 TNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAAIT 93
T R ++ RD + A+ P+ + +VLG L + Y ++P++ + A +
Sbjct 8 TLRTMSGSRRDADLLFAALA-PVGCFLGFTLVLGGLIRTGSMSYPQY-VLPVVIVQAMLF 65
Query 94 GSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLGFR 153
G+ A R+R G +RL LP+ + L +R+L R L+ + G GFR
Sbjct 66 GAMTTADRAARDRLSGFGSRLRTLPLPASVPLGARMLYCLTRALIALTATMAAGWSFGFR 125
Query 154 FRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQ-TVVVEGVELVQAIAIFFSTGLVPL 212
+ G +++++++ V+ +A+ + + + L Q + + STG+ P
Sbjct 126 MQGGPADAVLFVTIVVVFAMAVCLGADALGSRVGTVESSSQLLLLPQLVLVLLSTGIAPA 185
Query 213 NSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAV 264
S+P W+ PF+ +QPVS A+RG A G S + L W G+ V V
Sbjct 186 ESFPAWLAPFIRNQPVSQVTEALRGLATGHVAGSSLAAALTWCLGLLAVFGV 237
>gi|118465128|ref|YP_881223.1| ABC transporter [Mycobacterium avium 104]
gi|118166415|gb|ABK67312.1| ABC-2 type transporter [Mycobacterium avium 104]
Length=548
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/250 (38%), Positives = 141/250 (57%), Gaps = 2/250 (0%)
Query 26 FVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPL 85
FV Q+ + RLL RW RD + + A++ P L +V+ +++G VT LY +VP+
Sbjct 296 FVGQSASEAGRLLRRWRRDPVVAVQALLFPTLLLVIYKLLVGKSVLAVTGHDSLYGLVPM 355
Query 86 IALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLG 145
A+ A+ G+ + L ER G+L RLWV PVHRAS + R++A A RT+ + V+
Sbjct 356 CAVVGAVFGTIGAGLALPSERESGVLTRLWVQPVHRASPVAGRLVAEAARTVASAFVLTV 415
Query 146 TGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFF 205
G+ LG RF G I L ++ VPV + +A +VT +A +V + + +F
Sbjct 416 FGIALGLRFNDGWIAMLAFVLVPVTISAGMATLVTAIAARADGKAMVTWLGAGCVVLLFL 475
Query 206 STGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVP 265
+TG+ P +PGW+QP V + P+S I AMR A GGPVLSP+ +W G+ V P
Sbjct 476 NTGVAPAEVFPGWLQPVVRYSPISPTIEAMRALAQGGPVLSPLWQAGLW-GGVLVAVFAP 534
Query 266 LAI-GYRRAS 274
+A+ GYR A+
Sbjct 535 IAVRGYRAAA 544
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/232 (26%), Positives = 106/232 (46%), Gaps = 3/232 (1%)
Query 34 TNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAAIT 93
T R ++ RD + A+ P+ + +VLG L + Y ++P++ + A +
Sbjct 8 TLRTMSGSRRDADLLFAALA-PVGCFLGFTLVLGGLIRTGSMSYPQY-VLPVVIVQAMLF 65
Query 94 GSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLGFR 153
G+ A R+R G +RL LP+ + L +R+L R L+ + G GFR
Sbjct 66 GAMTTADRAARDRLSGFGSRLRTLPLPASVPLGARMLYCLTRALIALAATMAAGWSFGFR 125
Query 154 FRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQ-TVVVEGVELVQAIAIFFSTGLVPL 212
+ G +++++++ V+ +A+ + + + L Q + + STG+ P
Sbjct 126 MQGGPADAVLFVTIVVVFAMAVCLGADALGSRVGTVESSSQLLLLPQLVLVLLSTGIAPA 185
Query 213 NSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAV 264
S+P W+ PF+ +QPVS A+RG A G + L W G+ V V
Sbjct 186 ESFPAWMAPFIRNQPVSQVTEALRGLATGHVAGGSLAAALTWCLGLLAVFGV 237
>gi|262203606|ref|YP_003274814.1| ABC transporter [Gordonia bronchialis DSM 43247]
gi|262086953|gb|ACY22921.1| ABC-2 type transporter [Gordonia bronchialis DSM 43247]
Length=294
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/258 (37%), Positives = 150/258 (59%), Gaps = 1/258 (0%)
Query 20 QNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGL 79
+ + + + Q+L+ R L RD TV+ +++P L M++ +VLG+ T
Sbjct 36 EGSPKSWYTQSLVLARRQLVVLLRDRATVLQILLIPALTMIMFKVVLGDAVGKATGQDSA 95
Query 80 YSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVT 139
Y VPL+ L +A+ GS + L ER GLL RL+VLP++R + L SRI+ R +T
Sbjct 96 YGTVPLVILVSAMFGSIAAGVRLNLERGTGLLGRLYVLPINRGADLTSRIICEIARVTLT 155
Query 140 TLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTV-VVEGVELV 198
T ++L G ++GFRF QG + L + V ++ GIA + V +A+ T +V + L+
Sbjct 156 TAILLAAGTLIGFRFTQGPLAVLGILGVALLFGIAFSIFVLALAVNARPTAPIVPLLSLI 215
Query 199 QAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGI 258
++ +FF++G PL++YP W+QP V HQP++ AI MR FA GGP+ + +I + W AG+
Sbjct 216 SSLLMFFNSGFSPLDAYPTWLQPIVEHQPMTPAIEVMRSFAAGGPITADLIAVFAWAAGL 275
Query 259 CVVCAVPLAIGYRRASTH 276
++ P GYR+A+T
Sbjct 276 IILFTYPALRGYRKAATS 293
>gi|254774722|ref|ZP_05216238.1| ABC-2 type transporter [Mycobacterium avium subsp. avium ATCC
25291]
Length=548
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/250 (38%), Positives = 140/250 (56%), Gaps = 2/250 (0%)
Query 26 FVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPL 85
FV+ + + RLL RW RD I + A++ P ++V +++G VT LY +VP+
Sbjct 296 FVSHSASEAGRLLRRWRRDPIVAVQALLFPAFLLIVYKLLIGKAVLAVTGHDSLYGLVPM 355
Query 86 IALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLG 145
A+ A+ G+ + L ER G+L RLWV PVHRAS + R++A A RT + +V+
Sbjct 356 CAVVGAVFGTLGAGLALPAERESGVLTRLWVQPVHRASTVAGRLVAEAARTTASAVVLTI 415
Query 146 TGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFF 205
GV LG RF G I +L ++ VPV + +A +V +A +V + + +F
Sbjct 416 FGVALGLRFSYGWIAALAFVLVPVAISAGMATLVIAIAARADGKAMVTWLGAGCVLLLFL 475
Query 206 STGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVP 265
+TG+ P +PGW+QP V P+S I AMR A GGPVLSP+ +W AG+ V P
Sbjct 476 NTGVAPAGVFPGWLQPVVRFSPISPTIEAMRALAEGGPVLSPLWQAALW-AGVLVAVFAP 534
Query 266 LAI-GYRRAS 274
+A+ GYR A+
Sbjct 535 VAVRGYRAAA 544
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/211 (30%), Positives = 103/211 (49%), Gaps = 7/211 (3%)
Query 34 TNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAAIT 93
T R L+ RD + A+ P+ + +VLG+L + + Y ++P++ + A +
Sbjct 8 TLRTLSGSRRDADLLFAALA-PVGCFLGFTLVLGSLIHPGSMTYPQY-VLPVVIVQAMLF 65
Query 94 GSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLGFR 153
G+ A R+R G +RL LPV A L +R+L IR++V + + G GFR
Sbjct 66 GAMTTADRAARDRLSGFGSRLKTLPVPAAVPLAARMLYCLIRSVVALVAAVAVGWSFGFR 125
Query 154 FRQGLIPSLMWISVPVILGIAIAAMVTTVALYT---AQTVVVEGVELVQAIAIFFSTGLV 210
G P + V +++ A+A + AL + + + + L Q + + STG+
Sbjct 126 MAGG--PGDTGLFVIIVVAFAMAVCLGADALGSRVGSVESSSQLLLLPQLVLVLLSTGIA 183
Query 211 PLNSYPGWIQPFVAHQPVSYAIAAMRGFAMG 241
P S+P W+ PFV HQPVS +RG A G
Sbjct 184 PAESFPAWLGPFVRHQPVSRVTDTLRGLAAG 214
>gi|342857523|ref|ZP_08714179.1| ABC transporter [Mycobacterium colombiense CECT 3035]
gi|342134856|gb|EGT88022.1| ABC transporter [Mycobacterium colombiense CECT 3035]
Length=548
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/250 (37%), Positives = 139/250 (56%), Gaps = 2/250 (0%)
Query 26 FVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPL 85
FV+ + + RLL RW RD I + A++ P +++ +++G T LY +VP+
Sbjct 296 FVSHSASEAGRLLRRWRRDPIVAVQALLFPTFLLIIYKLLVGKSVLATTGHDSLYGLVPM 355
Query 86 IALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLG 145
A+ A+ G+ + L ER G+L RLWV PVHRAS + R++A A RT+++ LV+
Sbjct 356 CAVVGAVFGTLGAGLALPSEREAGVLTRLWVQPVHRASTVAGRLVAEAARTIMSALVLTA 415
Query 146 TGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFF 205
G+ LG RF G I L +I +PV + +A +V VA +V + + +F
Sbjct 416 FGIALGLRFNYGWIAMLGFILMPVAISAGMATLVIAVAARADGKAMVTWLGAGCVVLLFL 475
Query 206 STGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVP 265
+TG+ P +PGW+QP V P+S I AMR A GGPVLSP+ +W G+ V P
Sbjct 476 NTGVAPAEVFPGWLQPVVRFSPISPTIEAMRALAEGGPVLSPLWQAALW-GGVLVAVFAP 534
Query 266 LAI-GYRRAS 274
+A+ GYR A+
Sbjct 535 VAVRGYRAAA 544
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/203 (28%), Positives = 96/203 (48%), Gaps = 6/203 (2%)
Query 42 ARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAID 101
+R ++ A + P+ + +VLG L + Y +VP++ + A + G+ A
Sbjct 15 SRRDADLLFAALAPVGCFLGFTLVLGGLIHTGPMSYPQY-VVPVVIVQAMLFGAMTTADR 73
Query 102 LMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPS 161
R+R G +RL LPV A L +R+L R +V + + G + FR G P
Sbjct 74 AARDRLSGFGSRLRTLPVSAAVPLGARMLYCLTRAIVALVAAIAVGWLFDFRMEGG--PG 131
Query 162 LMWISVPVILGIAIAAMVTTVALYT---AQTVVVEGVELVQAIAIFFSTGLVPLNSYPGW 218
+ V +++ A+A + AL + + + + L Q + + STG+ P S+P W
Sbjct 132 DTVLFVIIVVAFAMAVCLGADALGSRAGSVESSSQLLLLPQLVLVLLSTGIAPAESFPTW 191
Query 219 IQPFVAHQPVSYAIAAMRGFAMG 241
+ PF+ +QPVS +RG A G
Sbjct 192 LGPFIRNQPVSQVTETLRGLATG 214
>gi|326385087|ref|ZP_08206757.1| ABC-2 type transporter [Gordonia neofelifaecis NRRL B-59395]
gi|326196172|gb|EGD53376.1| ABC-2 type transporter [Gordonia neofelifaecis NRRL B-59395]
Length=279
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/257 (35%), Positives = 156/257 (61%), Gaps = 1/257 (0%)
Query 19 SQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSG 78
++++AR + +++ + R + + RD T++ +++P L M++ +VLG+ T +
Sbjct 20 AESSARAWFHHSVVLSGRQILVYVRDVPTLLQTLIVPALSMIMFKVVLGDAIGNATGMNS 79
Query 79 LYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLV 138
Y VPL+ L A+ GS A L ER+ GLL+R++VLP++R + L SR+++ +R V
Sbjct 80 AYGTVPLVILVGAMFGSIATATRLNMERTSGLLSRIYVLPINRGADLTSRVISELVRIFV 139
Query 139 TTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTV-VVEGVEL 197
TT+++L G ++GFRF QG+ P+L I V + G A A +A+ + +V + L
Sbjct 140 TTVILLAAGHLIGFRFTQGVGPALGLIGVAMAYGAAFAVFTLALAVNASPGAPLVPYLGL 199
Query 198 VQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAG 257
+ ++ +FF++G P++ YPGW+QP VA+QP++ AI MR FA GGP+ + + +++W
Sbjct 200 LSSLLMFFNSGFSPVDMYPGWLQPIVANQPMTPAIEVMRSFAAGGPIAANLTKVIIWVVV 259
Query 258 ICVVCAVPLAIGYRRAS 274
+ V P GYR+A+
Sbjct 260 LFGVSVYPALRGYRKAA 276
>gi|254821611|ref|ZP_05226612.1| ABC-2 type transporter [Mycobacterium intracellulare ATCC 13950]
Length=548
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/250 (37%), Positives = 139/250 (56%), Gaps = 2/250 (0%)
Query 26 FVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPL 85
FV+ ++ + RLL RW RD I + A++ P ++V +++G VT LY +VP+
Sbjct 296 FVSHSVSEAGRLLRRWRRDPIVAVQALLFPTFLLIVYKLLIGKAVLAVTGHDSLYGLVPM 355
Query 86 IALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLG 145
A+ A+ G+ + L ER G+L RLWV PVHRAS + R++A A RT + +V+
Sbjct 356 CAVVGAVFGTLGAGLALPAERESGVLTRLWVQPVHRASTVAGRLVAEAARTTASAVVLTI 415
Query 146 TGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFF 205
G+ LG RF G I +L ++ VPV + +A +V +A +V + + +F
Sbjct 416 FGIALGLRFSYGWIAALAFVLVPVAISAGMATLVIAIAARADGKAMVTWLGAGCVLLLFL 475
Query 206 STGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVP 265
+TG+ P +PGW+QP V P+S I AMR A GGPV SP+ +W AG+ + P
Sbjct 476 NTGVAPAGVFPGWLQPVVRFSPISPTIEAMRALAEGGPVFSPLWQAGLW-AGVLIAVFAP 534
Query 266 LAI-GYRRAS 274
A+ GYR A+
Sbjct 535 AAVRGYRAAA 544
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (28%), Positives = 104/211 (50%), Gaps = 7/211 (3%)
Query 34 TNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAAIT 93
T R L+ RD + A+ P+ + +VLG+L + + Y ++P++ + A +
Sbjct 8 TLRTLSGSRRDADLLFAALA-PVGCFLGFTLVLGSLIHPGSMTYPQY-VLPVVIVQAMLF 65
Query 94 GSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLGFR 153
G+ A R+R G +RL LPV A L +R+L IR+++ + + G GFR
Sbjct 66 GAMTTADRAARDRLSGFGSRLKTLPVPAAVPLAARMLYCLIRSVIALVAAIAVGWSFGFR 125
Query 154 FRQGLIPSLMWISVPVILGIAIAAMVTTVALYT---AQTVVVEGVELVQAIAIFFSTGLV 210
G+ + +++ + ++ A+A + AL + + + + L Q + + STG+
Sbjct 126 MAGGVGDTSLFVII--VVAFAMAVCLGADALGSRVGSVESSSQLLLLPQLVLVLLSTGIA 183
Query 211 PLNSYPGWIQPFVAHQPVSYAIAAMRGFAMG 241
P S+P W+ PFV QPVS +RG A G
Sbjct 184 PAESFPAWLGPFVRQQPVSRVTDTLRGLAAG 214
>gi|262200665|ref|YP_003271873.1| ABC transporter [Gordonia bronchialis DSM 43247]
gi|262084012|gb|ACY19980.1| ABC-2 type transporter [Gordonia bronchialis DSM 43247]
Length=273
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/246 (37%), Positives = 138/246 (57%), Gaps = 1/246 (0%)
Query 28 AQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIA 87
AQ T LL W RD ++ ++V P + + ++V G + ++ L+A
Sbjct 25 AQVASYTGALLRAWVRDPGIIVQSLVFPAFMLAMFHLVFGESTTAIGLGDSIFGTTGLVA 84
Query 88 LGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTG 147
L A+ G+ + + ER GLL RLW LPV R+ LI RI+A +R T+++
Sbjct 85 LVGAMFGTAMAGLQFIEERDTGLLQRLWTLPVARSGYLIGRIVAEVVRMFAGTVILFAVA 144
Query 148 VVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFFST 207
V LGFRF QG + L + VPV+LG+ +A +V VA+ + + V+ + + ++ + +FF+T
Sbjct 145 VPLGFRFTQGWLAGLGALVVPVLLGVGVAFLVIAVAIVSGKAVIQQ-LSILFLLMLFFNT 203
Query 208 GLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLA 267
G P+ YPGW++P V +QP+S AI M G GGPV +IG LVW+ G+ VV V
Sbjct 204 GFAPVEEYPGWLEPVVRYQPMSLAIDTMSGLTEGGPVRDALIGTLVWSVGLSVVFGVLAV 263
Query 268 IGYRRA 273
GYRRA
Sbjct 264 RGYRRA 269
>gi|296164395|ref|ZP_06846970.1| DrrC protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295900235|gb|EFG79666.1| DrrC protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=263
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/248 (35%), Positives = 145/248 (59%), Gaps = 4/248 (1%)
Query 29 QTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIAL 88
Q+ Q RLL RW RD +IG+++LPI ++V IVLG + VT +Y +VP+ A+
Sbjct 14 QSQTQAGRLLLRWRRDQAVLIGSLMLPICLLLVYQIVLGEQVHRVTGVDSVYGVVPMCAV 73
Query 89 GAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGV 148
+A+ GS ++ + +R LL+R+WVLP+HRAS ++ + A +R+ + T+++ GV
Sbjct 74 LSALFGSLGNSVGITTDRESHLLSRMWVLPIHRASTVVGWVFAEVVRSFIGTVIITAIGV 133
Query 149 VLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVAL-YTAQTVVVEGVELVQAIAIFFST 207
+G RF QG +++++ +P ++ A+V +A+ +T + + A+A F +
Sbjct 134 TMGLRFHQGWPAAILFLLIPSVVVTGFTALVMAMAIRNNGRTAMTWLLGATFALA-FVNP 192
Query 208 GLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLA 267
G P+ +P W QP + QP+S I MRG A GGPV+ P++ VW A + + +P A
Sbjct 193 GATPIKMFPDWAQPLIRLQPISPPIETMRGLAHGGPVVGPLVATSVW-AIVLLAVFIPFA 251
Query 268 I-GYRRAS 274
+ GYR A+
Sbjct 252 MRGYRLAA 259
>gi|187761563|dbj|BAG31984.1| daunorubicin resistance protein C [Mycobacterium intracellulare]
Length=263
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/244 (32%), Positives = 136/244 (56%), Gaps = 2/244 (0%)
Query 29 QTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIAL 88
++ +Q RLL RW RD ++G+++LP+ + + IVLG + VT +Y +VP+ A+
Sbjct 14 ESWVQAGRLLLRWRRDQAVLMGSLLLPVFLLFIYKIVLGEQVHKVTGVDSIYGVVPMCAV 73
Query 89 GAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGV 148
+A+ GS ++ + +R LL+R+W+LP+HRAS + ++A +R + T+++ GV
Sbjct 74 ISALFGSLGNSVGITMDRESRLLSRMWILPIHRASAVTGWVIAEVVRAFIGTILITVIGV 133
Query 149 VLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFFSTG 208
+G RF G +L+++ P I+ A+V +A+ + + V F + G
Sbjct 134 AMGLRFTHGWPAALLFLLTPSIVVTGFTALVMAMAIRNNGRTAMTWLLGVTFALAFVNPG 193
Query 209 LVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLAI 268
P+ +P W QP + QP+S I MR A GGP+ +P + L+W A + + +PLA+
Sbjct 194 ATPIKLFPDWAQPLIRMQPISPPIETMRSLAYGGPIGAPFVTTLIW-AVVLLAVFLPLAV 252
Query 269 -GYR 271
GYR
Sbjct 253 RGYR 256
>gi|41407334|ref|NP_960170.1| DrrC [Mycobacterium avium subsp. paratuberculosis K-10]
gi|5524334|gb|AAD44227.1|AF143772_33 DrrC [Mycobacterium avium]
gi|41395686|gb|AAS03553.1| DrrC [Mycobacterium avium subsp. paratuberculosis K-10]
Length=263
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/248 (34%), Positives = 140/248 (57%), Gaps = 4/248 (1%)
Query 29 QTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIAL 88
Q+L+Q RLL RW RD ++G+++LPI + IVLG + VT +Y I P+ A+
Sbjct 14 QSLVQAGRLLLRWRRDQAVLMGSLLLPIFLLFAYQIVLGERVHQVTGIGSVYGIAPMCAV 73
Query 89 GAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGV 148
+A+ GS ++ + +R +L+R+WVLP+HRAS + ++A +R L+ T+++ +
Sbjct 74 ISALFGSLGNSVGITIDRESRVLSRMWVLPIHRASAVTGWVIAEVVRALIGTILITAIAL 133
Query 149 VLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVAL-YTAQTVVVEGVELVQAIAIFFST 207
+G RF G +L+++ +P I A+V +A+ +T + + A+A F +
Sbjct 134 AMGLRFTNGWAAALLFLLIPSITVTGFTALVMAMAVRKKGRTAMTWLLSATFALA-FVNP 192
Query 208 GLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLA 267
G P+ +P W +P + QP+S I AMR A GGP+L P+ W A + + +P+A
Sbjct 193 GATPIKLFPDWARPLIRMQPISPPIEAMRSLAHGGPILWPLAITFAW-AVVLIAVFIPIA 251
Query 268 I-GYRRAS 274
+ GYR A+
Sbjct 252 VRGYRLAA 259
>gi|254775701|ref|ZP_05217217.1| DrrC [Mycobacterium avium subsp. avium ATCC 25291]
Length=252
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/248 (34%), Positives = 140/248 (57%), Gaps = 4/248 (1%)
Query 29 QTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIAL 88
Q+L+Q RLL RW RD ++G+++LPI + IVLG + VT +Y I P+ A+
Sbjct 3 QSLVQAGRLLLRWRRDQAVLMGSLLLPIFLLFAYQIVLGERVHQVTGIGSVYGIAPMCAV 62
Query 89 GAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGV 148
+A+ GS ++ + +R +L+R+WVLP+HRAS + ++A +R L+ T+++ +
Sbjct 63 ISALFGSLGNSVGITIDRESRVLSRMWVLPIHRASAVTGWVIAEVVRALIGTILITAIAL 122
Query 149 VLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVAL-YTAQTVVVEGVELVQAIAIFFST 207
+G RF G +L+++ +P I A+V +A+ +T + + A+A F +
Sbjct 123 AMGLRFTNGWAAALLFLLIPSITVTGFTALVMAMAVRKKGRTAMTWLLSATFALA-FVNP 181
Query 208 GLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLA 267
G P+ +P W +P + QP+S I AMR A GGP+L P+ W A + + +P+A
Sbjct 182 GATPIKLFPDWARPLIRMQPISPPIEAMRSLAHGGPILWPLAITFAW-AVVLIAVFIPIA 240
Query 268 I-GYRRAS 274
+ GYR A+
Sbjct 241 VRGYRLAA 248
>gi|4416480|gb|AAD20380.1| daunorubicin resistance protein C [Mycobacterium avium]
Length=263
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/248 (33%), Positives = 139/248 (57%), Gaps = 4/248 (1%)
Query 29 QTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIAL 88
Q+L+Q RLL RW RD ++G+++LPI + VLG + VT +Y I P+ A+
Sbjct 14 QSLVQAGRLLLRWRRDQAVLMGSLLLPIFLLFAYQFVLGERVHQVTGIGSVYGIAPMCAV 73
Query 89 GAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGV 148
+A+ GS ++ + +R +L+R+WVLP+HRAS + ++A +R L+ T+++ +
Sbjct 74 ISALFGSLGNSVGITIDRESRVLSRMWVLPIHRASAVTGWVIAEVVRALIGTILITAIAL 133
Query 149 VLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVAL-YTAQTVVVEGVELVQAIAIFFST 207
+G RF G +L+++ +P I A+V +A+ +T + + A+A F +
Sbjct 134 AMGLRFTNGWAAALLFLLIPSITVTGFTALVMAMAVRKKGRTAMTWLLSATFALA-FVNP 192
Query 208 GLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLA 267
G P+ +P W +P + QP+S I AMR A GGP+L P+ W A + + +P+A
Sbjct 193 GATPIKLFPDWARPLIRMQPISPPIEAMRSLAHGGPILWPLAITFAW-AVVLIAVFIPIA 251
Query 268 I-GYRRAS 274
+ GYR A+
Sbjct 252 VRGYRLAA 259
>gi|342858818|ref|ZP_08715473.1| daunorubicin resistance protein C [Mycobacterium colombiense
CECT 3035]
gi|342134522|gb|EGT87702.1| daunorubicin resistance protein C [Mycobacterium colombiense
CECT 3035]
Length=263
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/250 (33%), Positives = 136/250 (55%), Gaps = 2/250 (0%)
Query 26 FVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPL 85
V ++ +Q RLL RW RD+ ++G+++LP+ + +VLG T +Y IVP+
Sbjct 11 LVTESWVQAGRLLIRWRRDFAVLMGSLLLPVFLLFCYQVVLGEQVRRATGIESVYGIVPM 70
Query 86 IALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLG 145
A+ +A+ GS ++ +M +R +L+R+W LP+HRAS L + A +R L T ++
Sbjct 71 CAVISALFGSLGGSVGIMMDRQSRVLSRMWTLPIHRASALTGWLTAEFVRALFGTTLITA 130
Query 146 TGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFF 205
GV +G RF G ++++ +P I+ A+V TVA+ + + V F
Sbjct 131 IGVAMGLRFIHGWPTIVLYLLIPSIVVTGFTALVMTVAIRDKGRAAMNWLVAVTFSMAFV 190
Query 206 STGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVP 265
+ G P+ +PGWI+ + QP+S I AMR A GGP+L P+ + A + +VP
Sbjct 191 NPGATPMAQFPGWIRLLIHLQPISPPIEAMRSLAHGGPLLQPL-SITAAWAVALLALSVP 249
Query 266 LAI-GYRRAS 274
+A+ GYR A+
Sbjct 250 IAVRGYRLAA 259
>gi|118462417|ref|YP_882434.1| daunorubicin resistance protein C [Mycobacterium avium 104]
gi|118163704|gb|ABK64601.1| daunorubicin resistance protein C [Mycobacterium avium 104]
Length=264
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/220 (33%), Positives = 123/220 (56%), Gaps = 0/220 (0%)
Query 29 QTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIAL 88
++ +Q RLL RW RD ++G+++LP+ + IVLG + VT +Y +VP+ A+
Sbjct 15 ESWVQAGRLLLRWRRDQAVLMGSLLLPVFLLFCYQIVLGEQVHRVTGAQSVYGVVPMCAV 74
Query 89 GAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGV 148
+A+ GS ++ + +R LL+R+WVLP+HRAS + ++A +R L+ T ++ G+
Sbjct 75 ISALFGSLGNSVGITMDRQSRLLSRMWVLPIHRASAITGWVMAEVVRALIGTTLITVIGL 134
Query 149 VLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFFSTG 208
+G RF QG +L+++ VP I+ A+V +A+ + + + +F + G
Sbjct 135 AMGLRFSQGWPAALLFLLVPSIVVTGFTALVMAMAIRNNGRAAMTWLLGITFALVFVNPG 194
Query 209 LVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPM 248
P+ +P W QP + QPVS I MR A GGP+ P+
Sbjct 195 ATPIKLFPHWAQPLIRMQPVSPPIETMRALAHGGPIAWPL 234
>gi|124001479|dbj|BAF45370.1| daunorubicin resistance protein C [Mycobacterium intracellulare]
Length=263
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/247 (34%), Positives = 137/247 (56%), Gaps = 2/247 (0%)
Query 29 QTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIAL 88
Q+ +Q RLL RW RD ++G+++LP+ + V IVLG VT +Y +VP+ A+
Sbjct 14 QSWVQAGRLLLRWRRDQAVLMGSLLLPVFLLFVYKIVLGEQVQKVTGVDSVYGVVPMCAV 73
Query 89 GAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGV 148
+A+ GS ++ + +R LL+R+WVLP+HRAS + +LA R + T+++ GV
Sbjct 74 ISALFGSLGNSVGITMDRQSRLLSRMWVLPIHRASAISGWVLAEIARAFIGTILITAIGV 133
Query 149 VLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFFSTG 208
+G RF QG +L+++ +P I+ A+V +A+ + + V F + G
Sbjct 134 AMGLRFTQGWPAALLFLLIPSIVVTGFTALVMAMAIRNNGRTAMTWLLSVTFALAFVNPG 193
Query 209 LVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLAI 268
P+ +P W QP + QP+S I MR A GGP+ P+ L+W A + + +P+A+
Sbjct 194 ATPIKLFPDWAQPLIRMQPISPPIETMRALAHGGPIEWPLAATLIW-AVVLLAVFIPIAV 252
Query 269 -GYRRAS 274
GYR A+
Sbjct 253 RGYRLAA 259
>gi|168479947|dbj|BAG11535.1| daunorubicin resistance protein C [Mycobacterium intracellulare]
Length=263
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/247 (33%), Positives = 139/247 (57%), Gaps = 2/247 (0%)
Query 29 QTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIAL 88
Q+ +Q RLL RW RD ++G+++LP+ + V +VLG + VT +Y +VP+ A+
Sbjct 14 QSWVQAGRLLLRWRRDQAVLMGSLLLPVFLLFVYKLVLGEQVHKVTGVDSVYGVVPMCAV 73
Query 89 GAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGV 148
+A+ GS ++ + +R LL+R+WVLP+HRAS + ++A R + T+++ GV
Sbjct 74 ISALFGSLGNSVGITMDRQSRLLSRMWVLPIHRASAISGWVIAEIARAFIGTILITAIGV 133
Query 149 VLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFFSTG 208
+G RF QG +L+++ +P I+ A+V +A+ + + V F + G
Sbjct 134 AMGLRFTQGWPAALLFVLIPSIVVTGFTALVMAMAIRNNGRTAMTWLLSVTFALAFVNPG 193
Query 209 LVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLAI 268
P+ +P W QP + QP+S I MR A GGP++ P+ ++W A + + +P+A+
Sbjct 194 ATPIKLFPDWAQPLIRMQPMSPPIETMRALAHGGPIMWPLAATVIW-AVVLLAVFIPVAV 252
Query 269 -GYRRAS 274
GYR A+
Sbjct 253 RGYRLAA 259
>gi|296141985|ref|YP_003649227.1| ABC-2 type transporter [Tsukamurella paurometabola DSM 20162]
gi|296030119|gb|ADG80888.1| ABC-2 type transporter [Tsukamurella paurometabola DSM 20162]
Length=272
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/239 (38%), Positives = 132/239 (56%), Gaps = 1/239 (0%)
Query 30 TLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALG 89
TL+ LL W+R + ++ AI P + + +VLG + + +Y+ LIAL
Sbjct 25 TLVVAGALLRAWSRSPVVLVQAIAFPAFLLAMFQLVLGKTVTAMGAGTSIYANAGLIALV 84
Query 90 AAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVV 149
+A+ GS + + ER G+L+R +PV RA+ L R++A A RT V+T ++L VV
Sbjct 85 SALYGSLATGLSFITERESGVLSRHATMPVPRAALLAGRLVAEAGRTAVSTALLLAMAVV 144
Query 150 LGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFFSTGL 209
LG RF QG + + VP+ G A A +V +A TA T +V+ V + +FF TG
Sbjct 145 LGLRFTQGPLAAAAAYLVPIAFGTAFALVVLALAAVTAGTQMVQLFGGVFLLLMFFGTGF 204
Query 210 VPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLAI 268
VP + YP W+QP V QP+S A MRG GGPV P++ +W AGI + A P+A+
Sbjct 205 VPADQYPVWLQPIVRWQPLSPATDLMRGLTEGGPVAVPLLATALWIAGI-LAFAFPVAL 262
>gi|213019973|dbj|BAG84181.1| daunorubicin resistance protein C [Mycobacterium intracellulare]
Length=239
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/209 (33%), Positives = 116/209 (56%), Gaps = 0/209 (0%)
Query 40 RWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVA 99
RW RD ++G+++LP+ + IVLG + VT +Y +VP+ A+ +A+ GS +
Sbjct 1 RWRRDQAVLMGSLLLPVFLLFCYQIVLGEQVHRVTGAQSVYGVVPMCAVISALFGSLGNS 60
Query 100 IDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLI 159
+ + +R LL+R+WVLP+HRAS + ++A +R L+ T ++ G+ +G RF QG
Sbjct 61 VGITMDRQSRLLSRMWVLPIHRASAITGWVMAEVVRALIGTTLITVIGLAMGLRFSQGWP 120
Query 160 PSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWI 219
+L+++ VP I+ A+V +A+ + + + +F + G P+ +P W
Sbjct 121 AALLFLLVPSIVVTGFTALVMAMAIRNNGRAAMTWLLGITFALVFVNPGATPIKLFPHWA 180
Query 220 QPFVAHQPVSYAIAAMRGFAMGGPVLSPM 248
QP + QPVS I MR A GGP+ P+
Sbjct 181 QPLIRMQPVSPPIETMRALAHGGPIAWPL 209
>gi|254819602|ref|ZP_05224603.1| daunorubicin resistance protein C [Mycobacterium intracellulare
ATCC 13950]
Length=232
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/225 (32%), Positives = 125/225 (56%), Gaps = 2/225 (0%)
Query 48 VIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERS 107
++G+++LP+ + + IVLG + VT +Y +VP+ A+ +A+ GS ++ + +R
Sbjct 2 LMGSLLLPVFLLFIYKIVLGEQVHKVTGVDSIYGVVPMCAVISALFGSLGNSVGITMDRE 61
Query 108 FGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISV 167
LL+R+W+LP+HRAS + ++A +R + T+++ GV +G RF G +L+++
Sbjct 62 SRLLSRMWILPIHRASAVTGWVIAEVVRAFIGTILITVIGVAMGLRFTHGWPAALLFLLT 121
Query 168 PVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQP 227
P I+ A+V +A+ + + V F + G P+ +P W QP + QP
Sbjct 122 PSIVVTGFTALVMAMAIRNNGRTAMTWLLGVTFALAFVNPGATPIKLFPDWAQPLIRMQP 181
Query 228 VSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLAI-GYR 271
+S I MR A GGP+ +P + L+W A + + +PLA+ GYR
Sbjct 182 ISPPIETMRSLAYGGPIGAPFVTTLIW-AVVLLAVFLPLAVRGYR 225
>gi|336457970|gb|EGO36958.1| daunorubicin resistance protein C [Mycobacterium avium subsp.
paratuberculosis S397]
Length=230
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/228 (32%), Positives = 127/228 (56%), Gaps = 4/228 (1%)
Query 49 IGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSF 108
+G+++LPI + IVLG + VT +Y I P+ A+ +A+ GS ++ + +R
Sbjct 1 MGSLLLPIFLLFAYQIVLGERVHQVTGIGSVYGIAPMCAVISALFGSLGNSVGITIDRES 60
Query 109 GLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPSLMWISVP 168
+L+R+WVLP+HRAS + ++A +R L+ T+++ + +G RF G +L+++ +P
Sbjct 61 RVLSRMWVLPIHRASAVTGWVIAEVVRALIGTILITAIALAMGLRFTNGWAAALLFLLIP 120
Query 169 VILGIAIAAMVTTVAL-YTAQTVVVEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQP 227
I A+V +A+ +T + + A+A F + G P+ +P W +P + QP
Sbjct 121 SITVTGFTALVMAMAVRKKGRTAMTWLLSATFALA-FVNPGATPIKLFPDWARPLIRMQP 179
Query 228 VSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLAI-GYRRAS 274
+S I AMR A GGP+L P+ W A + + +P+A+ GYR A+
Sbjct 180 ISPPIEAMRSLAHGGPILWPLAITFAW-AVVLIAVFIPIAVRGYRLAA 226
>gi|108800073|ref|YP_640270.1| ABC-2 type transporter [Mycobacterium sp. MCS]
gi|119869199|ref|YP_939151.1| ABC-2 type transporter [Mycobacterium sp. KMS]
gi|108770492|gb|ABG09214.1| ABC-2 type transporter [Mycobacterium sp. MCS]
gi|119695288|gb|ABL92361.1| ABC-2 type transporter [Mycobacterium sp. KMS]
Length=264
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/249 (33%), Positives = 135/249 (55%), Gaps = 4/249 (1%)
Query 26 FVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPL 85
+ ++ + +RL +W R + + A++ P L +++ ++G +T SGL ++P+
Sbjct 11 LLTESWIFASRLFIQWRRYPMVPLQALLFPTLLLIIYGALVGKSMVRLTGSSGLNELIPV 70
Query 86 IALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLG 145
L A+ G+ + + +R GLL R+WV+PVHR + L +LA A+RTLV + V+L
Sbjct 71 CMLAGAMAGAVGAGLMVPWDRDSGLLTRMWVMPVHRTAPLTGALLAEALRTLVASAVVLA 130
Query 146 TGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAIFF 205
G ++GFRF G L+++ +PVI+ + A +V T+AL +++ + V + + F
Sbjct 131 AGYLMGFRFAGGWTGMLVYLLIPVIVVVVFATVVITLALRPQGRIILTWAQTV-CVGLAF 189
Query 206 STGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVP 265
T L P P ++P QP++ A MR A GG V+ PM+ +W I V VP
Sbjct 190 GT-LAPPERVPALVRPLAEFQPLAAPAATMRALASGGDVMRPMLLTALWVIVIAAVF-VP 247
Query 266 LAI-GYRRA 273
L + GYR A
Sbjct 248 LTVRGYRAA 256
>gi|288918488|ref|ZP_06412839.1| ABC-2 type transporter [Frankia sp. EUN1f]
gi|288350128|gb|EFC84354.1| ABC-2 type transporter [Frankia sp. EUN1f]
Length=270
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/271 (29%), Positives = 130/271 (48%), Gaps = 7/271 (2%)
Query 9 IELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGN 68
++L+P +PG A ++ L+ W + V A + P+LF+++ V G
Sbjct 4 LDLSP--VPGRGRLAWEAADAWVMCRRNLVQTWRVPELLVF-ATIQPVLFVLLFTYVFGG 60
Query 69 LAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISR 128
V + ++P + + I GS I L ++ GL+ R LP+ R++ L R
Sbjct 61 AINVGPGVEYVDYLMPGVFVQTVIFGSMMTGIGLATDKEAGLIDRFRALPMSRSALLTGR 120
Query 129 ILANAIRTLVTTLVMLGTGVVLGFRF-RQGLIPSLMWISVPVILGIAIAAMVTTVALYTA 187
LA+ +R L+ML G+ +GFRF ++ +L + ++ A + + + +
Sbjct 121 TLADLVRNAFIILIMLLVGLAVGFRFGNTTVLAALAGFGLMLLFAYAFSWLSAVIGMSVG 180
Query 188 QTVVVEGVELVQAIA-IFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLS 246
+ ++ +F S+ P+ S PGW+Q F HQPV+ + A+R +GGPV
Sbjct 181 SAEAAQSGGMIWIFPFVFASSSFAPVESMPGWLQAFAKHQPVTCTVDAVRALFLGGPVAG 240
Query 247 PMIGMLVWTAGICVVCAVPLAI-GYRRASTH 276
++ L W AGI VV A PLA+ YRR + H
Sbjct 241 DLLAALAWCAGILVV-AGPLAVRAYRRGTAH 270
>gi|86740179|ref|YP_480579.1| hypothetical protein Francci3_1473 [Frankia sp. CcI3]
gi|86567041|gb|ABD10850.1| ABC-2 [Frankia sp. CcI3]
Length=269
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/273 (29%), Positives = 130/273 (48%), Gaps = 12/273 (4%)
Query 9 IELAPT---RLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIV 65
IEL P RL + A + + L+QT R+ VI A + P++F+++ V
Sbjct 4 IELTPAGRGRLSWAVADAWVMCRRNLIQTWRIPE-------LVIFATIQPVMFVLLFTYV 56
Query 66 LGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGL 125
G V + ++P I L I GS + L +R GL+ R LP+ R++ L
Sbjct 57 FGGAINVGDGVKYVDYLMPGIFLQTVIFGSMLTGVGLAEDRQRGLIDRFRSLPMSRSALL 116
Query 126 ISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPS-LMWISVPVILGIAIAAMVTTVAL 184
R LA+ R + +VML G+ +GFRF + +P+ L + ++ A + + + L
Sbjct 117 TGRTLADLARNVFIVVVMLLVGLAVGFRFGETTVPAALAGFGLMLLFSYAFSWLSAVIGL 176
Query 185 YTAQTVVVEGVELVQAIAIFF-STGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGP 243
+ + + + F S+ + + PGW+Q F HQPV+ + A+R +GGP
Sbjct 177 SVSSAEAAQSAGFIWIFPLVFASSAFARVETMPGWLQAFARHQPVTVTVDAVRALFLGGP 236
Query 244 VLSPMIGMLVWTAGICVVCAVPLAIGYRRASTH 276
V+S ++ L W G+ VV A YRR+++
Sbjct 237 VVSVLLQSLAWCLGLLVVFGPFAARVYRRSASR 269
>gi|111221709|ref|YP_712503.1| putative integral membrane transport protein [Frankia alni ACN14a]
gi|111149241|emb|CAJ60926.1| putative integral membrane transport protein [Frankia alni ACN14a]
Length=279
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/269 (29%), Positives = 124/269 (47%), Gaps = 7/269 (2%)
Query 8 EIELAPTRLPGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLG 67
+EL P R + A + ++ L+ W +TV A V P+LF+++ V G
Sbjct 13 SVELVPVR---RGSLAWAVIDAWVMARRNLVQTWRIPELTVF-ATVQPVLFVLLFTYVFG 68
Query 68 NLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLIS 127
V + ++P + I G+ + L +R GL+ R LP+ R++ L
Sbjct 69 GAINVGGGLDYVDYLMPGVFTQTVIFGAMVTGLGLAEDRQRGLMDRFRSLPMTRSALLTG 128
Query 128 RILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPS-LMWISVPVILGIAIAAMVTTVALYT 186
R L++ +R +VML G+ +GFRF +P+ L + ++ A + + L
Sbjct 129 RTLSDLLRNAFIIVVMLAVGLAVGFRFGDTTVPAVLAGFGLILLFSYAFCWLSAVIGLSV 188
Query 187 AQTVVVEGVELVQAIAIFF-STGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVL 245
+ V + F S+ P+ + PGW+Q F HQPVS I A+R +GGPV
Sbjct 189 RSAEAAQSGGFVWIFPLVFASSAFAPVATMPGWLQAFARHQPVSVTIDAVRSLFLGGPVS 248
Query 246 SPMIGMLVWTAGICVVCAVPLAIGYRRAS 274
S ++ L W G+ V A PLA+G R S
Sbjct 249 SSLLQSLAWCLGLLAVFA-PLAVGIHRRS 276
>gi|312196784|ref|YP_004016845.1| ABC transporter [Frankia sp. EuI1c]
gi|311228120|gb|ADP80975.1| ABC-2 type transporter [Frankia sp. EuI1c]
Length=287
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/270 (29%), Positives = 126/270 (47%), Gaps = 18/270 (6%)
Query 17 PGSQNAARLFVAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHD 76
P ++++ VA L R L R ++ + V P+LF+++ V G V
Sbjct 26 PANRSSLAWAVADAWLLAKRTLIHTWRVPDVLVFSSVQPVLFVLLFTYVFGGAIDVGPGR 85
Query 77 SGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRT 136
+ ++P + + G+ I L ++ GLL R LP+ R++ L R L++ +R
Sbjct 86 HYVDYLMPGVFAQTVVFGAMLTGIGLATDKQNGLLDRFRSLPMSRSALLAGRTLSDLVRN 145
Query 137 LVTTLVMLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTV--VVEG 194
L+ML G+ +GFRF + V+ G A+ + + + + T+ V
Sbjct 146 TFILLLMLAVGLAVGFRFHHT-------TAAAVVGGFAVLLLFSYAFSWISATIGMAVSN 198
Query 195 VELVQAIAI-------FFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMGGPVLSP 247
E Q+ I F S+G P+++ PGW++ F HQPVS I A R GGPV
Sbjct 199 PEAAQSGGIIWVFPLVFASSGFAPVSTMPGWLRAFANHQPVSVTIDASRALFQGGPVAGD 258
Query 248 MIGMLVWTAGICVVCAVPLAI-GYRRASTH 276
+I + W+ GI V PLA+ YRR+++
Sbjct 259 LIASVAWSVGIIAVFG-PLAVRTYRRSTSK 287
>gi|117927549|ref|YP_872100.1| ABC-2 type transporter [Acidothermus cellulolyticus 11B]
gi|117648012|gb|ABK52114.1| ABC-2 type transporter [Acidothermus cellulolyticus 11B]
Length=273
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/255 (31%), Positives = 121/255 (48%), Gaps = 8/255 (3%)
Query 27 VAQTLLQTNRLLTRWARDYITVIGAIVLPILFMVVLNIVLGNLAYVVTHDSGLYSIVPLI 86
VA T R L W R ++ +V P++F ++ V G S + ++P I
Sbjct 20 VADAATLTRRNLLVWWRVPAFLVFTVVQPVMFTLLFRYVFGGAISTGGRGSYVDYLMPGI 79
Query 87 ALGAAITGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLVMLGT 146
A S AI L E G++ R +P+ R++ L R+ A+ +R L T LV+LG
Sbjct 80 IGQTAAFASIGTAIALGNEAGKGIIDRFRSMPMARSAVLAGRLAADTLRMLFTILVILGV 139
Query 147 GVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVALYTAQTVVVEGVELVQAIAI-FF 205
G ++GFRF G+ ++ + + G+ I A+ + L ++ L+ + F
Sbjct 140 GYLVGFRFHNGVAGAIGMVLLAGFFGLTICAVSAYIGLAIKDEESIQAFGLIWLFPLTFV 199
Query 206 STGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAM----GGPVLSPMIGM-LVWTAGICV 260
S+ VP+NS PGW+Q F +QPV+ I +R A+ G L P + L W GI
Sbjct 200 SSAFVPINSMPGWLQAFANNQPVTIVINTLRYLALGPTPGASALQPHLWQSLAWLVGILA 259
Query 261 VCAVPLAI-GYRRAS 274
V PLA+ YRR S
Sbjct 260 VFG-PLAVRAYRRLS 273
>gi|336178138|ref|YP_004583513.1| ABC-2 type transporter [Frankia symbiont of Datisca glomerata]
gi|334859118|gb|AEH09592.1| ABC-2 type transporter [Frankia symbiont of Datisca glomerata]
Length=277
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/223 (30%), Positives = 109/223 (49%), Gaps = 3/223 (1%)
Query 55 PILFMVVLNIVLGNLAYVVTHDSGLYSIVPLIALGAAITGSTFVAIDLMRERSFGLLARL 114
P++F+++ V G V + ++P I + AI GS + L +R GL+ R
Sbjct 54 PVMFVLLFVYVFGGAINVGPGVDYVDFLMPGIFIQTAIFGSMVTGVGLAEDRQRGLIDRF 113
Query 115 WVLPVHRASGLISRILANAIRTLVTTLVMLGTGVVLGFRFRQGLIPS-LMWISVPVILGI 173
LP+ R + L R L++ R + +ML G+ +GFRF +P+ L+ ++ ++
Sbjct 114 RSLPMSRGALLAGRTLSDLFRNVFVVAIMLLVGIAVGFRFGDTTVPAVLVGFALMLLFSY 173
Query 174 AIAAMVTTVALYTAQTVVVEGVELVQAIAIFF-STGLVPLNSYPGWIQPFVAHQPVSYAI 232
A A + + L + + + F S+ VP+++ PGW+Q F HQP++ I
Sbjct 174 AFAWVSAVIGLSVRNAEAAQSAGFIWVFPLTFASSAFVPVSTMPGWLQAFAEHQPITVTI 233
Query 233 AAMRGFAMGGPVLSPMIGMLVWTAGICVVCAVPLAIGYRRAST 275
A R +GGPV S ++ L W G+ VV VP I R ST
Sbjct 234 DATRALFLGGPVASALLQSLAWCVGMLVVF-VPWCIRVYRRST 275
Lambda K H
0.329 0.140 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 435544382258
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40