BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2943
Length=413
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610080|ref|NP_217459.1| IS1533 transposase [Mycobacterium t... 834 0.0
gi|289553267|ref|ZP_06442477.1| transposase [Mycobacterium tuber... 832 0.0
gi|167970042|ref|ZP_02552319.1| transposase [Mycobacterium tuber... 802 0.0
gi|289751616|ref|ZP_06510994.1| transposase [Mycobacterium tuber... 696 0.0
gi|119952501|ref|YP_949926.1| IS21 family transposase IstA [Arth... 593 2e-167
gi|120401504|ref|YP_951333.1| integrase catalytic subunit [Mycob... 588 7e-166
gi|340628601|ref|YP_004747053.1| transposase [Mycobacterium cane... 585 4e-165
gi|238059791|ref|ZP_04604500.1| integrase catalytic region [Micr... 501 8e-140
gi|330464901|ref|YP_004402644.1| integrase catalytic subunit [Ve... 492 6e-137
gi|328684933|gb|AEB33880.1| transposase [Mycobacterium sp. JS330] 489 3e-136
gi|159036672|ref|YP_001535925.1| integrase catalytic protein [Sa... 485 6e-135
gi|29834089|ref|NP_828723.1| IS21 family transposase [Streptomyc... 476 4e-132
gi|159038160|ref|YP_001537413.1| integrase catalytic protein [Sa... 474 1e-131
gi|134099159|ref|YP_001104820.1| IS21 family transposase [Saccha... 471 7e-131
gi|134102886|ref|YP_001108547.1| IS21 family transposase [Saccha... 471 1e-130
gi|340627022|ref|YP_004745474.1| ismt3 transposase a [Mycobacter... 459 5e-127
gi|258653210|ref|YP_003202366.1| Integrase catalytic subunit [Na... 454 1e-125
gi|332671375|ref|YP_004454383.1| integrase catalytic subunit [Ce... 451 9e-125
gi|296138753|ref|YP_003645996.1| integrase [Tsukamurella paurome... 401 1e-109
gi|134098341|ref|YP_001104002.1| transposase [Saccharopolyspora ... 393 3e-107
gi|315443019|ref|YP_004075898.1| transposase [Mycobacterium sp. ... 388 9e-106
gi|269957362|ref|YP_003327151.1| Integrase catalytic region [Xyl... 388 1e-105
gi|126434831|ref|YP_001070522.1| IS1533 transposase [Mycobacteri... 371 1e-100
gi|50955027|ref|YP_062315.1| transposase, ISlxx1-degenerated [Le... 368 1e-99
gi|325962426|ref|YP_004240332.1| transposase [Arthrobacter phena... 360 2e-97
gi|120404855|ref|YP_954684.1| integrase catalytic subunit [Mycob... 351 1e-94
gi|291010161|ref|ZP_06568124.1| IS21 family transposase [Sacchar... 349 5e-94
gi|334337226|ref|YP_004542378.1| Integrase catalytic region [Iso... 345 9e-93
gi|134097029|ref|YP_001102690.1| transposase, ISlxx1-degenerated... 335 8e-90
gi|25777791|gb|AAN75599.1| ORFL4 [Saccharopolyspora erythraea NR... 333 3e-89
gi|134097351|ref|YP_001103012.1| transposase, ISlxx1-degenerated... 333 3e-89
gi|258653752|ref|YP_003202908.1| Integrase catalytic subunit [Na... 327 2e-87
gi|289755764|ref|ZP_06515142.1| IS21 family transposase IstA [My... 314 2e-83
gi|343928086|ref|ZP_08767549.1| putative transposase [Gordonia a... 312 6e-83
gi|256826339|ref|YP_003150299.1| integrase family protein [Kytoc... 306 5e-81
gi|288924487|ref|ZP_06418453.1| Integrase catalytic region [Fran... 300 2e-79
gi|331698617|ref|YP_004334856.1| Integrase catalytic region [Pse... 296 4e-78
gi|288924431|ref|ZP_06418418.1| Integrase catalytic region [Fran... 284 2e-74
gi|134101519|ref|YP_001107180.1| IS21 family transposase [Saccha... 280 2e-73
gi|134098406|ref|YP_001104067.1| IS21 family transposase [Saccha... 266 5e-69
gi|298346899|ref|YP_003719586.1| IS21 family transposase [Mobilu... 265 1e-68
gi|20043267|gb|AAM09085.1| Tpase1 [Frankia sp. Ar15] 250 3e-64
gi|77454771|ref|YP_345639.1| putative transposase [Rhodococcus e... 218 2e-54
gi|227548586|ref|ZP_03978635.1| IS21 family transposase [Coryneb... 213 4e-53
gi|15610773|ref|NP_218154.1| transposase [Mycobacterium tubercul... 210 4e-52
gi|5912497|emb|CAB56167.1| putative transposase A [Mycobacterium... 208 2e-51
gi|33867201|ref|NP_898759.1| IS sequence [Rhodococcus erythropol... 202 9e-50
gi|291009897|ref|ZP_06567870.1| IS21 family transposase [Sacchar... 191 2e-46
gi|77454772|ref|YP_345640.1| putative transposase [Rhodococcus e... 187 3e-45
gi|145221179|ref|YP_001131857.1| integrase catalytic subunit [My... 184 3e-44
>gi|15610080|ref|NP_217459.1| IS1533 transposase [Mycobacterium tuberculosis H37Rv]
gi|15842491|ref|NP_337528.1| IS1533 transposase protein A [Mycobacterium tuberculosis CDC1551]
gi|31794120|ref|NP_856613.1| IS1533 transposase [Mycobacterium bovis AF2122/97]
71 more sequence titles
Length=413
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/413 (100%), Positives = 413/413 (100%), Gaps = 0/413 (0%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE
Sbjct 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ
Sbjct 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL
Sbjct 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY
Sbjct 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA
Sbjct 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV
Sbjct 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
Query 361 HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA 413
HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA
Sbjct 361 HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA 413
>gi|289553267|ref|ZP_06442477.1| transposase [Mycobacterium tuberculosis KZN 605]
gi|289437899|gb|EFD20392.1| transposase [Mycobacterium tuberculosis KZN 605]
Length=412
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/412 (99%), Positives = 412/412 (100%), Gaps = 0/412 (0%)
Query 2 LTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEP 61
+TVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEP
Sbjct 1 MTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEP 60
Query 62 RIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQC 121
RIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQC
Sbjct 61 RIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQC 120
Query 122 DFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALG 181
DFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALG
Sbjct 121 DFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALG 180
Query 182 AVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYL 241
AVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYL
Sbjct 181 AVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYL 240
Query 242 ERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPAT 301
ERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPAT
Sbjct 241 ERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPAT 300
Query 302 GWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVH 361
GWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVH
Sbjct 301 GWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVH 360
Query 362 QTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA 413
QTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA
Sbjct 361 QTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA 412
>gi|167970042|ref|ZP_02552319.1| transposase [Mycobacterium tuberculosis H37Ra]
Length=413
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/413 (97%), Positives = 400/413 (97%), Gaps = 0/413 (0%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE
Sbjct 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ
Sbjct 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL
Sbjct 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAK PEAKGLIERAHDY
Sbjct 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKCSSAGRPSPEAKGLIERAHDY 240
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
F PGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA
Sbjct 241 WSARFCPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV
Sbjct 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
Query 361 HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA 413
HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA
Sbjct 361 HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA 413
>gi|289751616|ref|ZP_06510994.1| transposase [Mycobacterium tuberculosis T92]
gi|289692203|gb|EFD59632.1| transposase [Mycobacterium tuberculosis T92]
Length=344
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/344 (100%), Positives = 344/344 (100%), Gaps = 0/344 (0%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE
Sbjct 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ
Sbjct 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL
Sbjct 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY
Sbjct 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA
Sbjct 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHV 344
TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHV
Sbjct 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHV 344
>gi|119952501|ref|YP_949926.1| IS21 family transposase IstA [Arthrobacter aurescens TC1]
gi|119951631|gb|ABM10541.1| IS21 family element, transposase istA [Arthrobacter aurescens
TC1]
Length=417
Score = 593 bits (1529), Expect = 2e-167, Method: Compositional matrix adjust.
Identities = 292/411 (72%), Positives = 327/411 (80%), Gaps = 4/411 (0%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRL RAEGL IK IA+ LGIS+NTV++A+ S+ PKY R P GS VDA E I
Sbjct 1 MEDWAEIRRLRRAEGLGIKTIAKTLGISRNTVRAAIASDAPPKYRRRPAGSAVDAFEDAI 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R+ L A PTMPATVIAER+GW R I V RVAELRP YLPPDPA RTTYVAGEIAQCD
Sbjct 61 RQQLAAVPTMPATVIAERVGWTRGITVFKERVAELRPAYLPPDPAGRTTYVAGEIAQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFPPI+LPVGFGQTR KQLPVLTMV YSRWL +L+PSR AEDLFAGWW+LI ALGAV
Sbjct 121 WFPPIQLPVGFGQTRGPKQLPVLTMVTGYSRWLSGILIPSRRAEDLFAGWWQLISALGAV 180
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
PR+LVWDGEGAIGR RGGR ELT +CQAFRG L KV++ +PA+PE KG+IERAHDYLER
Sbjct 181 PRLLVWDGEGAIGRNRGGRIELTGDCQAFRGVLGTKVIVLKPAEPEHKGIIERAHDYLER 240
Query 244 SFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATGW 303
SFLPGRVF+ PADFN QL WL VN RTRRALGCAPTDRI ADR AML+LPPVAPA GW
Sbjct 241 SFLPGRVFSDPADFNVQLQGWLTQVNARTRRALGCAPTDRIAADRQAMLTLPPVAPAVGW 300
Query 304 CTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQT 363
S RL RDHYVR DSNDYSVHP VIG R+ V ADL+RV VFC+G +VADH+R+WA HQT
Sbjct 301 RHSTRLARDHYVRLDSNDYSVHPAVIGRRIEVVADLDRVKVFCEGRVVADHQRVWAWHQT 360
Query 364 VSDPAHVEAAKVLRRRHFSAASPV----VEPQVQVRSLSDYDDALGVDIDG 410
++DP H++AAK LRR A PV E V+ R L DYD ALG+D+ G
Sbjct 361 ITDPEHLQAAKTLRRTRVGALRPVRDAETELAVEQRPLGDYDTALGIDLGG 411
>gi|120401504|ref|YP_951333.1| integrase catalytic subunit [Mycobacterium vanbaalenii PYR-1]
gi|119954322|gb|ABM11327.1| Integrase, catalytic region [Mycobacterium vanbaalenii PYR-1]
Length=419
Score = 588 bits (1515), Expect = 7e-166, Method: Compositional matrix adjust.
Identities = 290/415 (70%), Positives = 323/415 (78%), Gaps = 4/415 (0%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
ML+VEDWAEIRRLHRAEGLPIKMIAR LGIS+NTV++AL S PKYER P GS VDA E
Sbjct 1 MLSVEDWAEIRRLHRAEGLPIKMIARTLGISRNTVRAALASEGPPKYERKPAGSAVDAFE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
IR L+ PTMPATVIAER+GW R + V S RV ELRP YLPPDPA RT+Y G+IAQ
Sbjct 61 DAIRVELKKTPTMPATVIAERVGWTRGMTVFSERVRELRPAYLPPDPAGRTSYDPGDIAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CD WFPP +PVG+GQTRT QLPVLTMV YSRWL A+LLPSR AEDLFAGWW+LI AL
Sbjct 121 CDLWFPPTTIPVGYGQTRTPTQLPVLTMVLGYSRWLSAILLPSRRAEDLFAGWWQLIAAL 180
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
GAVPR LVWDGEGAIGR RGGR ELT +CQAFRG L KV++ +PA+PE KG+IERAHDY
Sbjct 181 GAVPRTLVWDGEGAIGRNRGGRIELTRDCQAFRGVLGTKVVVLKPAEPEHKGIIERAHDY 240
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
ERSFLPGR F P DFN Q WL +VN R RR LGCAPTDRIGAD AAML+LPPV P
Sbjct 241 FERSFLPGREFNGPGDFNHQFSKWLHVVNARRRRVLGCAPTDRIGADLAAMLALPPVPPQ 300
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
GW S RL RDHYVR DSNDYSVHPGVIG R+ V ADL+RV VFC+G+ VA+HER+WA
Sbjct 301 VGWRNSTRLARDHYVRLDSNDYSVHPGVIGRRIEVVADLDRVQVFCEGKTVAEHERVWAW 360
Query 361 HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQV----RSLSDYDDALGVDIDGG 411
HQT++DP H EAA +LRR SA PV + QV R LSDYD ALG+D+ G
Sbjct 361 HQTITDPEHREAANMLRRNRISALRPVTDSDQQVLVEQRRLSDYDAALGIDLGEG 415
>gi|340628601|ref|YP_004747053.1| transposase [Mycobacterium canettii CIPT 140010059]
gi|340006791|emb|CCC45979.1| transposase [Mycobacterium canettii CIPT 140010059]
Length=411
Score = 585 bits (1508), Expect = 4e-165, Method: Compositional matrix adjust.
Identities = 286/407 (71%), Positives = 321/407 (79%), Gaps = 0/407 (0%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
ML+VEDWAEIRRL R+E LPI IARVL IS+NTVKSAL S+ PKY+RA +GS+ D E
Sbjct 1 MLSVEDWAEIRRLRRSERLPISEIARVLKISRNTVKSALASDGPPKYQRAAKGSVADEAE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
PRIRELL AYP MPATVIAERIGW SIR LS RV ELRP+YLPPDPASRTTYVAGEI Q
Sbjct 61 PRIRELLAAYPRMPATVIAERIGWSYSIRTLSGRVRELRPLYLPPDPASRTTYVAGEIGQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CDFWFP + +PVG+GQ RTA LPVLTMVC YSRW A+L+P+R AEDL+AGWW+ + L
Sbjct 121 CDFWFPDVVVPVGYGQVRTATALPVLTMVCGYSRWASALLIPTRTAEDLYAGWWQHLSTL 180
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
GAVPRVLVWDGEGA+GRWR + ELT C AFRGTLAAKV IC+P DPEAKGL+ER HDY
Sbjct 181 GAVPRVLVWDGEGAVGRWRARQPELTAACHAFRGTLAAKVWICKPGDPEAKGLVERFHDY 240
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
LER+FLPGRVFASPADFN QL AWL N R R LGC P DRI AD AAML+LPPV P+
Sbjct 241 LERAFLPGRVFASPADFNTQLQAWLVRANHRQHRVLGCRPADRIEADTAAMLTLPPVGPS 300
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
GW TS RLPRDHYVR D NDYSVHP IG R+ + ADL RV V+C G LVADH+RIWA
Sbjct 301 IGWRTSTRLPRDHYVRLDGNDYSVHPVAIGRRIEITADLSRVRVWCGGTLVADHDRIWAK 360
Query 361 HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVD 407
HQT+SDP HV AAK+LRR+ F P +V+ R L+ YD LG+D
Sbjct 361 HQTISDPGHVVAAKLLRRKRFDIVGPPHHVEVEQRLLTTYDTVLGLD 407
>gi|238059791|ref|ZP_04604500.1| integrase catalytic region [Micromonospora sp. ATCC 39149]
gi|238059835|ref|ZP_04604544.1| integrase [Micromonospora sp. ATCC 39149]
gi|238061705|ref|ZP_04606414.1| integrase catalytic region [Micromonospora sp. ATCC 39149]
gi|238064038|ref|ZP_04608747.1| integrase catalytic region [Micromonospora sp. ATCC 39149]
gi|237881602|gb|EEP70430.1| integrase catalytic region [Micromonospora sp. ATCC 39149]
gi|237881646|gb|EEP70474.1| integrase [Micromonospora sp. ATCC 39149]
gi|237883516|gb|EEP72344.1| integrase catalytic region [Micromonospora sp. ATCC 39149]
gi|237885849|gb|EEP74677.1| integrase catalytic region [Micromonospora sp. ATCC 39149]
Length=408
Score = 501 bits (1291), Expect = 8e-140, Method: Compositional matrix adjust.
Identities = 246/407 (61%), Positives = 295/407 (73%), Gaps = 3/407 (0%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
ML++E+WAEIRRLHRAEG+PIK+IAR LG+ +NTV+ AL + PKY+R +GSIVDAVE
Sbjct 1 MLSMENWAEIRRLHRAEGMPIKVIARTLGVGRNTVRRALAAQGPPKYQRPAKGSIVDAVE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
P+IR LL+ +P+MPATVIAERIGW RS+ VL RV LRP+++ PDPA RT Y+ GE+AQ
Sbjct 61 PQIRALLREWPSMPATVIAERIGWTRSLTVLKERVRLLRPLFMAPDPAQRTEYLPGELAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CD WFPP ++P+GFGQ + PVL MV YSRWL A+++PSR + DL G W LI
Sbjct 121 CDLWFPPADVPLGFGQV---GRPPVLVMVSGYSRWLSAVMIPSRQSPDLLVGHWTLISGW 177
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
G VP+ LVWD E AIG+WR GR +LT AFRGTL KV+ CRPADPE+KGL+ERA+ Y
Sbjct 178 GRVPKALVWDNESAIGQWRAGRPQLTEAMNAFRGTLGIKVIQCRPADPESKGLVERANGY 237
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
LE SFLPGR F+SPADFNAQL WL N R R LGC P R ADR ML LPPVAP
Sbjct 238 LETSFLPGRRFSSPADFNAQLTEWLVRANNRQHRTLGCRPVQRWDADRQVMLPLPPVAPV 297
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
GW + RLPRDHYVR D NDYSVHP V+G RV V AD++RV VFCDG VA H+R WA
Sbjct 298 VGWRQTTRLPRDHYVRLDGNDYSVHPSVVGRRVEVTADVDRVEVFCDGRAVARHDRCWAK 357
Query 361 HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVD 407
HQ+++DP H AA LR + V+ QV+ R LSDYD G+D
Sbjct 358 HQSITDPVHRRAAADLRIAAQHKPAAAVDGQVERRPLSDYDRLFGLD 404
>gi|330464901|ref|YP_004402644.1| integrase catalytic subunit [Verrucosispora maris AB-18-032]
gi|328807872|gb|AEB42044.1| integrase catalytic region [Verrucosispora maris AB-18-032]
Length=408
Score = 492 bits (1266), Expect = 6e-137, Method: Compositional matrix adjust.
Identities = 242/407 (60%), Positives = 290/407 (72%), Gaps = 3/407 (0%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
ML+VEDWAEIRRLHRAE + IK I R LG+S+NTV+ AL S++ P+Y+RA +GSIVDAVE
Sbjct 1 MLSVEDWAEIRRLHRAERMAIKAICRRLGVSRNTVRRALASHEPPRYQRAAKGSIVDAVE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
P+IR LL +P MP TVI ER+GW R V + RV +LRP++ PDP+ RT Y+ GE+AQ
Sbjct 61 PQIRALLAEFPDMPTTVIMERVGWTRGKTVFADRVQQLRPLFRRPDPSQRTEYLPGELAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CD WFPP ++P+GFGQ + PVL MV YSRWL A+++PSR + DL G W LI
Sbjct 121 CDLWFPPADVPLGFGQV---GRPPVLVMVSGYSRWLSAVMIPSRQSADLLVGHWTLISGW 177
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
G VP+ LVWD E A+G+WR GR +LT AFRGTL KV+ CRPADPEAKGL+ERA+ Y
Sbjct 178 GRVPKALVWDNESAVGQWRTGRPQLTEAMNAFRGTLGIKVIQCRPADPEAKGLVERANGY 237
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
LE SFLPGR F SP DFNAQL WL N R R LGC P DR ADRAAML LPPVAP
Sbjct 238 LETSFLPGRCFGSPQDFNAQLTEWLVRANNRQHRVLGCRPLDRWDADRAAMLPLPPVAPV 297
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
GW + RLPRDHYVR D NDYSVHP V+G RV V AD ++V VFCDG V H+R WA
Sbjct 298 VGWRQTTRLPRDHYVRVDGNDYSVHPSVVGRRVEVTADCDQVQVFCDGRSVTRHDRCWAK 357
Query 361 HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVD 407
HQ+++DPAH +AA LR + V+ QV+ R LSDYD G+D
Sbjct 358 HQSITDPAHRQAAADLRVAAQRTPTTAVDAQVERRPLSDYDRLFGLD 404
>gi|328684933|gb|AEB33880.1| transposase [Mycobacterium sp. JS330]
Length=339
Score = 489 bits (1259), Expect = 3e-136, Method: Compositional matrix adjust.
Identities = 234/335 (70%), Positives = 266/335 (80%), Gaps = 0/335 (0%)
Query 73 MPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDFWFPPIELPV 132
MPATVIAERI W SIR LS RV ELRPVYLPP+PASRTTYVAGEIAQCDFWFP IELPV
Sbjct 1 MPATVIAERIEWSYSIRTLSERVRELRPVYLPPNPASRTTYVAGEIAQCDFWFPDIELPV 60
Query 133 GFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAVPRVLVWDGE 192
G+GQ RTA LPVLTMVC YSRW A+L+P+R AEDL++GWW+ + LGAVPRVLVWDGE
Sbjct 61 GYGQVRTATALPVLTMVCGYSRWASALLVPTRTAEDLYSGWWQHLSMLGAVPRVLVWDGE 120
Query 193 GAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLERSFLPGRVFA 252
GA+GRWR + ELT CQAFRGTLA KVLIC+PADPEAKGL+ER HDYLER+FLPGRVF
Sbjct 121 GAVGRWRARQPELTAACQAFRGTLATKVLICKPADPEAKGLVERFHDYLERAFLPGRVFT 180
Query 253 SPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATGWCTSLRLPRD 312
SPADFN QL WL N R R L C P DRI AD+AAML+LPPV P+ GW S RLPRD
Sbjct 181 SPADFNTQLADWLVRANHRHHRVLQCRPADRIDADKAAMLALPPVGPSVGWRNSTRLPRD 240
Query 313 HYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQTVSDPAHVEA 372
HY+R D+NDYSVHPG +G R+ V ADL+RV V+C G LVADH RIWA HQT+ DP H++A
Sbjct 241 HYIRLDANDYSVHPGAVGRRIEVTADLDRVRVWCAGTLVADHARIWAKHQTICDPGHLDA 300
Query 373 AKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVD 407
AK+LRR F + +V+ R L+DYD ALG+D
Sbjct 301 AKLLRRNRFDVLTAPAHVEVEQRRLADYDTALGLD 335
>gi|159036672|ref|YP_001535925.1| integrase catalytic protein [Salinispora arenicola CNS-205]
gi|159037222|ref|YP_001536475.1| integrase catalytic protein [Salinispora arenicola CNS-205]
gi|159037591|ref|YP_001536844.1| integrase catalytic protein [Salinispora arenicola CNS-205]
9 more sequence titles
Length=408
Score = 485 bits (1248), Expect = 6e-135, Method: Compositional matrix adjust.
Identities = 240/407 (59%), Positives = 289/407 (72%), Gaps = 3/407 (0%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
ML+VEDWAEIRRLHRAE + IK I R LG+S+NTV+ AL S++ P+Y+RA +GSIVDAVE
Sbjct 1 MLSVEDWAEIRRLHRAERMAIKAICRRLGVSRNTVRKALASHEPPRYQRAAKGSIVDAVE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
P+IR LL +P MP TVI ER+GW R V + RV +LRP++ PDP+ RT Y+ GE+AQ
Sbjct 61 PQIRVLLAEFPDMPTTVIMERVGWTRGKTVFADRVQQLRPLFRRPDPSQRTEYLPGELAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CD WFPP ++P+GFGQ + PVL MV YSRWL A+++PSR + DL G WRLI
Sbjct 121 CDLWFPPADVPLGFGQV---GRPPVLVMVSGYSRWLSAVMIPSRQSPDLLVGHWRLISGW 177
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
VP+ LVWD E A+G+WR GR +LT AFRGTL KV+ CRPADPEAKGL+ERA+ Y
Sbjct 178 RRVPKALVWDNESAVGQWRAGRPQLTEAMNAFRGTLGIKVIQCRPADPEAKGLVERANGY 237
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
LE SFLPGR FASP DFNAQL WL N R R LGC P +R ADR AML LPPVAP
Sbjct 238 LETSFLPGRRFASPGDFNAQLSEWLVRANNRQHRVLGCRPAERWDADRQAMLPLPPVAPV 297
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
GW + RLPRDHYVR D NDYSVHP V+G RV V AD ++V V CDG VA H+R WA
Sbjct 298 VGWRQATRLPRDHYVRMDGNDYSVHPSVVGRRVEVTADGDQVTVLCDGRSVARHDRCWAK 357
Query 361 HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVD 407
HQ+++D AH +AA LR + V+ QV+ R LSDYD G+D
Sbjct 358 HQSITDTAHRQAAADLRVAAQRTPTAAVDAQVERRPLSDYDRLFGLD 404
>gi|29834089|ref|NP_828723.1| IS21 family transposase [Streptomyces avermitilis MA-4680]
gi|29611214|dbj|BAC75258.1| putative IS21 family ISMt3-like transposase [Streptomyces avermitilis
MA-4680]
Length=413
Score = 476 bits (1224), Expect = 4e-132, Method: Compositional matrix adjust.
Identities = 246/411 (60%), Positives = 295/411 (72%), Gaps = 5/411 (1%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRLHRAE +P++ IAR LGI++NTV+ A+ + PKY+RAP+GSIVDAVEP+I
Sbjct 1 MEDWAEIRRLHRAEQMPVRAIARKLGIARNTVRRAIADDAPPKYQRAPKGSIVDAVEPQI 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
RELL+ +P MPATVIAERIGW+R + VL RV +LRP Y P DPASRT Y GEI QCD
Sbjct 61 RELLEQWPEMPATVIAERIGWDRGLTVLKDRVRDLRPAYRPADPASRTVYEPGEIGQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFPP ++P+GFGQ + PVL MV YSRW+ A +LPSR A DL AG WRL+ LGAV
Sbjct 121 WFPPADIPLGFGQV---GRPPVLVMVAGYSRWITARMLPSRSAADLIAGHWRLLTELGAV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
PRVLVWD EGA+G WR G +LT E AF G L K L+C+P DPE+KGL+ERA+ YLE
Sbjct 178 PRVLVWDNEGAVGSWRSGGPQLTDEFAAFAGLLGIKFLLCKPRDPESKGLVERANGYLET 237
Query 244 SFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATGW 303
SFLPGRVF SPADFN QL WL N R R L P DR+ ADR+ ML+LPP+AP W
Sbjct 238 SFLPGRVFTSPADFNIQLADWLTRANRRIHRTLQARPADRLEADRSRMLALPPIAPPGWW 297
Query 304 CTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQT 363
SLRLPRDHYVR D+ DYSVHP +G R+ V A L++V V CDG VA H R WA HQT
Sbjct 298 KASLRLPRDHYVRLDTCDYSVHPLAVGRRIEVAAGLDQVLVTCDGVEVARHARSWARHQT 357
Query 364 VSDPAHVEAAKVLRRRHF-SAASPVVEPQVQVRSLSDYDDALGVDIDGGVA 413
++DP H AA V R+ + +PV +V+ RSL YD GV IDGG++
Sbjct 358 ITDPDHAAAAAVARKAAAGTKPAPVDVTEVEERSLDTYDRIFGV-IDGGLS 407
>gi|159038160|ref|YP_001537413.1| integrase catalytic protein [Salinispora arenicola CNS-205]
gi|157916995|gb|ABV98422.1| Integrase catalytic region [Salinispora arenicola CNS-205]
Length=408
Score = 474 bits (1220), Expect = 1e-131, Method: Compositional matrix adjust.
Identities = 239/409 (59%), Positives = 286/409 (70%), Gaps = 7/409 (1%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
ML+VEDWAEIRRL R+EG+ I+ IAR L +S+NTVK AL S++ P+Y R +GSIVDAVE
Sbjct 1 MLSVEDWAEIRRLRRSEGMAIQAIARRLRMSRNTVKKALASDEPPRYRRVAKGSIVDAVE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
P+IR LL +P MP TVI R+GW R V RV +LRP++ PDPA RT Y+ GE+AQ
Sbjct 61 PQIRALLAEFPEMPTTVIMVRVGWTRGKTVFCDRVQQLRPLFRRPDPAQRTEYLPGELAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CD WFPP ++ +GFGQ + PVL MV YSRWL A+++PSR + DL G W LI
Sbjct 121 CDLWFPPADVSLGFGQV---GRPPVLVMVSGYSRWLSAVMIPSRQSPDLLDGHWTLISGW 177
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
P+ LVWD E A+G+WR GR +LT AFRGTL KV+ CRPADPEAKGL+ERA+ Y
Sbjct 178 DRTPKGLVWDNESAVGQWRAGRPQLTEAMNAFRGTLGIKVIQCRPADPEAKGLVERANGY 237
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
LE SFLPGR FASP DFNAQL WL N R R LGC P DR ADRAAMLSLPPVAP
Sbjct 238 LETSFLPGRRFASPQDFNAQLTEWLVRANNRQHRMLGCRPVDRWDADRAAMLSLPPVAPV 297
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
GW + RLPRDHYVR DSNDYSVHP +G RV + AD +RV VFC+ L A H+R WA
Sbjct 298 VGWRRTTRLPRDHYVRLDSNDYSVHPAAVGRRVDIVADADRVQVFCENRLFARHDRCWAK 357
Query 361 HQTVSDPAHVEAAKVLRR--RHFSAASPVVEPQVQVRSLSDYDDALGVD 407
HQ+++DPAH +AA LR R AA+ E V+ R L+DYD G+D
Sbjct 358 HQSITDPAHRQAAADLRTAARQTPAAAGTTE--VEHRQLADYDRMFGLD 404
>gi|134099159|ref|YP_001104820.1| IS21 family transposase [Saccharopolyspora erythraea NRRL 2338]
gi|133911782|emb|CAM01895.1| IS21 family transposase [Saccharopolyspora erythraea NRRL 2338]
Length=412
Score = 471 bits (1213), Expect = 7e-131, Method: Compositional matrix adjust.
Identities = 233/404 (58%), Positives = 282/404 (70%), Gaps = 3/404 (0%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRLHR EG+PI+ I R LG+ +NTV+ AL S P+Y+R +GS+VDAVEP++
Sbjct 1 MEDWAEIRRLHRCEGMPIRAIVRKLGVGRNTVRRALASEGPPRYQRPSKGSVVDAVEPQV 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R LL +PTMP VIAERIGW+R + VL RV ELRP++LPPDP SRT Y GE+AQCD
Sbjct 61 RALLAEWPTMPVPVIAERIGWQRGLTVLKDRVRELRPLFLPPDPVSRTVYQPGELAQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFPP+++P+GFGQ + PVL MV YSR + A L+PSR DL AG W L+ G V
Sbjct 121 WFPPVDIPLGFGQV---GRPPVLVMVSGYSRVIAARLIPSRQGPDLLAGHWALLSGWGRV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
P+ LVWD E A+G + GR LT AFRGTL V+ CRPADPEAKGL+ER + YLE
Sbjct 178 PKTLVWDNESAVGFRKAGRPVLTEAMNAFRGTLGIAVIQCRPADPEAKGLVERVNGYLET 237
Query 244 SFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATGW 303
SFLPGR F PADFNAQL WL N R R LGC PTDR DR AML+LPPVAP GW
Sbjct 238 SFLPGRSFTGPADFNAQLAGWLRRANQRHHRVLGCKPTDRWEHDRQAMLTLPPVAPVVGW 297
Query 304 CTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQT 363
+RLPRDHY+R +NDYSVHP IGHRV + DL+ V V C G LVA H+R WA HQ+
Sbjct 298 HAGIRLPRDHYIRLGANDYSVHPSAIGHRVEITGDLDTVTVACQGRLVARHDRCWAAHQS 357
Query 364 VSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVD 407
++D H AA LR++ A+ V+ V+ R L+DYD ALG+D
Sbjct 358 ITDSDHATAAARLRQQVRRASLRPVDTPVEHRELADYDRALGLD 401
>gi|134102886|ref|YP_001108547.1| IS21 family transposase [Saccharopolyspora erythraea NRRL 2338]
gi|133915509|emb|CAM05622.1| IS21 family transposase [Saccharopolyspora erythraea NRRL 2338]
Length=412
Score = 471 bits (1212), Expect = 1e-130, Method: Compositional matrix adjust.
Identities = 238/407 (59%), Positives = 284/407 (70%), Gaps = 4/407 (0%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRLHR EG+PI+ I R LG+ +NTV+ AL S P+Y+R +GS+VDAVEP+I
Sbjct 1 MEDWAEIRRLHRCEGMPIRAIVRKLGVGRNTVRRALASEGPPRYQRPSKGSVVDAVEPQI 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R LL +PTMP VIAERIGW+R + VL RV ELRP++LPPDP SRT Y GE+AQCD
Sbjct 61 RALLAEWPTMPVPVIAERIGWQRGLTVLKDRVRELRPLFLPPDPVSRTVYQPGELAQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFPP+++P+GFGQ + PVL MV YSR + A L+PSR DL AG W L+ G V
Sbjct 121 WFPPVDIPLGFGQV---GRPPVLVMVSGYSRVIAARLIPSRQGPDLLAGHWALLSGWGRV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
P+ LVWD E A+G + GR LT AFRGTL V+ CR DPEAKGL+ERA+ YLE
Sbjct 178 PKTLVWDNESAVGFRKAGRPVLTEAMNAFRGTLGIAVIQCRLGDPEAKGLVERANGYLET 237
Query 244 SFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATGW 303
SFLPGR F SPADFN QL WL N R R LGC P DR DR AML+LPPVAP TGW
Sbjct 238 SFLPGRRFTSPADFNTQLADWLVRANQRHHRILGCRPADRWEHDRQAMLALPPVAPVTGW 297
Query 304 CTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCD-GELVADHERIWAVHQ 362
S+RLPRDHYVR +NDYSVHP IGHRV + DLE V V C G LVA H+R WA HQ
Sbjct 298 RASIRLPRDHYVRLGANDYSVHPSAIGHRVEITGDLEHVEVSCQGGGLVARHQRCWAAHQ 357
Query 363 TVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDID 409
+++DP H AA LR++ A+ V+ V+ R L+DYD ALG+D D
Sbjct 358 SITDPDHATAAARLRQQARRASLRPVDTPVEHRELADYDRALGLDTD 404
>gi|340627022|ref|YP_004745474.1| ismt3 transposase a [Mycobacterium canettii CIPT 140010059]
gi|340005212|emb|CCC44365.1| ismt3 transposase a [Mycobacterium canettii CIPT 140010059]
Length=325
Score = 459 bits (1180), Expect = 5e-127, Method: Compositional matrix adjust.
Identities = 230/332 (70%), Positives = 255/332 (77%), Gaps = 10/332 (3%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
ML+VEDWAEIRRL R+E LPI IARVL IS+NTVKSAL S+ PKY+RA +GS+ D E
Sbjct 1 MLSVEDWAEIRRLRRSERLPISEIARVLKISRNTVKSALASDGPPKYQRAAKGSVADEAE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
PRIRELL AYP MPATVIAERIGW SIR LS RV ELRP+YLPPDPASRTTYVAGEI Q
Sbjct 61 PRIRELLAAYPRMPATVIAERIGWSYSIRTLSGRVRELRPLYLPPDPASRTTYVAGEIGQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CDFWFP + +PVG+GQ RTA LPVLTMVC YSRW A+L+P+R AEDL+AGWW+ + L
Sbjct 121 CDFWFPDVVVPVGYGQVRTATALPVLTMVCGYSRWASALLIPTRTAEDLYAGWWQHLSTL 180
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
GAVPRVLVWDGEGA+GRWR + ELT C AFRGTLAAKV IC+P DPEAKGL+ER HDY
Sbjct 181 GAVPRVLVWDGEGAVGRWRARQPELTAACHAFRGTLAAKVWICKPGDPEAKGLVERFHDY 240
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
LER+FLPGRVFASPADFN QL AWL N R R LGC P DRI AD AAML+LPPV P+
Sbjct 241 LERAFLPGRVFASPADFNTQLQAWLVRANHRQHRVLGCRPADRIEADTAAMLTLPPVGPS 300
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHR 332
GW + D S HP GHR
Sbjct 301 IGWRAGV---------SDPGAESPHPAR-GHR 322
>gi|258653210|ref|YP_003202366.1| Integrase catalytic subunit [Nakamurella multipartita DSM 44233]
gi|258556435|gb|ACV79377.1| Integrase catalytic region [Nakamurella multipartita DSM 44233]
Length=421
Score = 454 bits (1167), Expect = 1e-125, Method: Compositional matrix adjust.
Identities = 244/409 (60%), Positives = 286/409 (70%), Gaps = 3/409 (0%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
ML V+DWAEIRRLHRAEG+PI+ IAR LG SKNTVK AL + P+YERA GS VDA E
Sbjct 1 MLIVDDWAEIRRLHRAEGMPIRAIARRLGCSKNTVKRALAAQGPPRYERATVGSAVDAFE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
P IR LL +P+MP +VI ER+GW R V RVA LRP+++PPDPASRT Y G++AQ
Sbjct 61 PAIRALLAEFPSMPTSVIMERVGWSRGRTVFFERVAVLRPLFVPPDPASRTEYGPGQLAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CD WFPP+++PVGF Q + PVL MV +SR + A +LPSR + DL AG W L+
Sbjct 121 CDLWFPPVDVPVGFDQV---ARPPVLVMVSGFSRVITARMLPSRQSADLLAGHWELLLGW 177
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
G +PR LVWD E A+GRWRGGR ELT AFRGTL KV++C P DPE+KGL+ERA+ Y
Sbjct 178 GRLPRALVWDNEAAVGRWRGGRPELTEPMNAFRGTLGIKVVLCAPRDPESKGLVERANGY 237
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
LE SFLPGR F SPADFNAQL AWL N R R LGC P DR AD AAM+++PPVAP
Sbjct 238 LETSFLPGRTFTSPADFNAQLAAWLVRANQRQHRRLGCRPIDRWAADLAAMMAMPPVAPV 297
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
GW S LPRDHYVR DSNDYSVHPGV+G RV V ADL++V V C G +VA HER WA
Sbjct 298 VGWTASPLLPRDHYVRVDSNDYSVHPGVVGRRVQVLADLDQVVVTCAGTVVAAHERCWAR 357
Query 361 HQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDID 409
QT++D H +AA LR H VE V VR L+DYD G+ D
Sbjct 358 RQTITDADHAQAAAALRAAHRERVRRPVETDVAVRELADYDRIFGLQDD 406
>gi|332671375|ref|YP_004454383.1| integrase catalytic subunit [Cellulomonas fimi ATCC 484]
gi|332340413|gb|AEE46996.1| Integrase catalytic region [Cellulomonas fimi ATCC 484]
Length=407
Score = 451 bits (1160), Expect = 9e-125, Method: Compositional matrix adjust.
Identities = 234/409 (58%), Positives = 284/409 (70%), Gaps = 10/409 (2%)
Query 2 LTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEP 61
+TVEDWAEIRRLHR +G+ IK IAR LG+S+N V+ AL + P+YERA +GS+VD V+P
Sbjct 1 MTVEDWAEIRRLHRVDGMAIKAIARRLGVSRNAVRRALARDAPPRYERAAKGSLVDQVDP 60
Query 62 RIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQC 121
+R LL + PTMPATVIA+RIGW S+ +L RV LRP YL PDPA+RT+Y AG+ QC
Sbjct 61 VVRGLLASCPTMPATVIAQRIGWTHSLTILKDRVRVLRPYYLAPDPATRTSYEAGQRVQC 120
Query 122 DFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALG 181
D WFPP+++P+G GQ + PVL MV YSR + A +LPSR A DL AG WRL+ A+G
Sbjct 121 DLWFPPVDVPLGAGQVGSP---PVLVMVAGYSRMMFATMLPSRQAPDLIAGHWRLLNAMG 177
Query 182 AVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYL 241
VPR LVWD E A+G WR G+ +LT E +AFRG L V CRP DPEAKGL+ERA+ YL
Sbjct 178 VVPRELVWDNEAAVGSWRAGKPKLTEEFEAFRGVLGIGVHQCRPRDPEAKGLVERANGYL 237
Query 242 ERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPAT 301
E SFLPGR+F SP DFN QL WL L N R RALGC P +R ADR AML+LPPVAP
Sbjct 238 ETSFLPGRMFTSPGDFNTQLADWLVLANRRPHRALGCKPVERWTADRDAMLALPPVAPQL 297
Query 302 GWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVH 361
GW +RLPRDHYVR SNDYSV P +G V V ADL++V V +VA HER WA
Sbjct 298 GWRARVRLPRDHYVRLGSNDYSVDPVAVGRFVEVIADLQQVTVRLGTRVVAVHERCWARW 357
Query 362 QTVSDPAH----VEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGV 406
QT++DPAH +E A V R S+A+P +V+ R L YD A G+
Sbjct 358 QTITDPAHRAAALEMASVAAHRPASSAAP---DEVEQRDLGAYDVAFGL 403
>gi|296138753|ref|YP_003645996.1| integrase [Tsukamurella paurometabola DSM 20162]
gi|296026887|gb|ADG77657.1| Integrase catalytic region [Tsukamurella paurometabola DSM 20162]
Length=430
Score = 401 bits (1031), Expect = 1e-109, Method: Compositional matrix adjust.
Identities = 213/410 (52%), Positives = 270/410 (66%), Gaps = 14/410 (3%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRLH+AEG+PIK+I+R LG+++NTV++AL S++ P+Y+RAP+GS+VD EP+I
Sbjct 1 MEDWAEIRRLHQAEGMPIKVISRQLGVARNTVRAALASDRPPQYQRAPKGSVVDPYEPQI 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R LLQ++PTMPA VIA+RIGW S+ L R+A LRP Y DP+ R TY G+IAQCD
Sbjct 61 RALLQSWPTMPAPVIAQRIGWPYSLSPLKKRLALLRPEYKGIDPSDRITYEPGKIAQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFP +++PVG GQ R LPVL MV +SR + A++LPSR DL +G W+LIE G V
Sbjct 121 WFPDVKIPVGPGQDRV---LPVLVMVLGFSRHISAVMLPSRQGGDLLSGMWQLIEGWGRV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
P+ LVWD E AI GG + T E F GTLA ++++ DPE KG++ERA+ YLE
Sbjct 178 PKSLVWDREAAI----GGTGKPTVEVAGFAGTLATRIVLAPARDPEFKGIVERANQYLET 233
Query 244 SFLPGRVFASPADFNAQLGAWLA-LVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATG 302
SFLPGRVF SPADFNAQ+ WL N R RA G P + D AAM LPP+AP G
Sbjct 234 SFLPGRVFTSPADFNAQMTEWLTQTANRRLVRATGTRPAEAFTTDFAAMTVLPPMAPMAG 293
Query 303 WCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQ 362
+RL RD+YVR D NDYS+ P VIG V + A +V CDG+ VA H R WA H
Sbjct 294 LRQRIRLGRDYYVRVDGNDYSIDPRVIGKFVDIAATPTQVVAACDGQPVALHRRSWAKHT 353
Query 363 TVSDPAHVEAAKVLRRRHFSAASPVVEPQ------VQVRSLSDYDDALGV 406
V+DP HV A++LR R+ Q V +R+L DYD GV
Sbjct 354 NVTDPQHVATAQLLRARYQEIGRQASPRQHHDGHPVALRALPDYDALFGV 403
>gi|134098341|ref|YP_001104002.1| transposase [Saccharopolyspora erythraea NRRL 2338]
gi|133910964|emb|CAM01077.1| transposase [Saccharopolyspora erythraea NRRL 2338]
Length=337
Score = 393 bits (1010), Expect = 3e-107, Method: Compositional matrix adjust.
Identities = 194/326 (60%), Positives = 230/326 (71%), Gaps = 3/326 (0%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRLHR EG+PI+ I R LG+ +NTV+ AL S P+Y+R +GS+VDAVEP+I
Sbjct 1 MEDWAEIRRLHRCEGMPIRAIVRKLGVGRNTVRRALASEGPPRYQRPSKGSVVDAVEPQI 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R LL +PTMP VIAERIGW R + VL RV ELRP++LPPDP SRT Y GE+AQCD
Sbjct 61 RALLAEWPTMPVPVIAERIGWLRGLTVLKDRVRELRPLFLPPDPVSRTVYQPGELAQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFPP+++P+GFGQ + PVL MV YSR + A L+PSR DL AG W L+ G V
Sbjct 121 WFPPVDIPLGFGQV---GRPPVLVMVSGYSRVIAARLIPSRQGPDLLAGHWALLSGWGRV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
P+ LVWD E A+G + GR LT AFRGTL V+ CRP DPEAKGL+ERA+ YLE
Sbjct 178 PKTLVWDNESAVGFRKAGRPVLTEAMNAFRGTLGIAVIQCRPGDPEAKGLVERANGYLET 237
Query 244 SFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATGW 303
SFLPGR F SPADFNAQL WL N R R LGC PTDR DR AML+LPPVAP GW
Sbjct 238 SFLPGRSFTSPADFNAQLAGWLTRANRRHHRVLGCKPTDRWEHDRHAMLALPPVAPVVGW 297
Query 304 CTSLRLPRDHYVRCDSNDYSVHPGVI 329
+RLPRDHYVR +ND++ G +
Sbjct 298 HAGIRLPRDHYVRLGANDWACQVGCV 323
>gi|315443019|ref|YP_004075898.1| transposase [Mycobacterium sp. Spyr1]
gi|315261322|gb|ADT98063.1| transposase [Mycobacterium sp. Spyr1]
Length=413
Score = 388 bits (997), Expect = 9e-106, Method: Compositional matrix adjust.
Identities = 210/409 (52%), Positives = 255/409 (63%), Gaps = 9/409 (2%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
M+++EDWA IR LHR+EGL + IAR LGI+++TV AL + PKYERA S +DAVE
Sbjct 1 MISLEDWALIRHLHRSEGLSQRAIARQLGIARDTVAGALACDGPPKYERASSPSAIDAVE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
P IR LL YP +PATV+AER+GW SI RV +RP YLP DP R + G + Q
Sbjct 61 PGIRALLSTYPQLPATVLAERVGWTGSISWFRERVRAIRPEYLPADPVDRLAHPPGRVVQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIE-A 179
CD WFP + VGFGQ LPVL MV A+SR++ A++LPSR DL AG W+L+ +
Sbjct 121 CDLWFPAPRIAVGFGQE---AMLPVLVMVAAFSRFIAAVMLPSRQTMDLVAGMWQLLSGS 177
Query 180 LGAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHD 239
A+P L WD E IGR R LT A GTL ++++ +P DPE+KG++ERA+
Sbjct 178 FAAIPHELWWDNEAGIGR----RGRLTDPVTALMGTLGSRLVQLKPYDPESKGMVERANR 233
Query 240 YLERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAP 299
YLE SFLPGR F SP DFN QLG WL + N R R L P D + ADRA ML+LPPV+P
Sbjct 234 YLETSFLPGRSFTSPDDFNDQLGQWLPVANRRRVRVLDGRPVDFLDADRAQMLALPPVSP 293
Query 300 ATGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWA 359
TS+RL RD+YVR NDYSV P IG V V L +V V G L+A H R WA
Sbjct 294 TVETVTSVRLGRDYYVRVAGNDYSVDPNAIGQLVDVSTTLTQVRVSRAGRLLATHGRCWA 353
Query 360 VHQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDI 408
QT++DPAHV A L R F A P V VR LSDYD A GVD
Sbjct 354 ARQTLTDPAHVATAAAL-RHQFQAGPPSVVGDQLVRDLSDYDRAFGVDF 401
>gi|269957362|ref|YP_003327151.1| Integrase catalytic region [Xylanimonas cellulosilytica DSM 15894]
gi|269306043|gb|ACZ31593.1| Integrase catalytic region [Xylanimonas cellulosilytica DSM 15894]
Length=428
Score = 388 bits (996), Expect = 1e-105, Method: Compositional matrix adjust.
Identities = 212/418 (51%), Positives = 264/418 (64%), Gaps = 20/418 (4%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRLHR+EG+PIK IAR LG+++NTV++AL ++ P+Y R +GS+VD VE +
Sbjct 1 MEDWAEIRRLHRSEGVPIKAIARRLGVARNTVRAALAASDPPRYSRPAKGSLVDEVESLV 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
RE L+ PTMPATVIA+RIGW RS+ +L R+ ++RP Y DPA R + G+ QCD
Sbjct 61 REQLRLDPTMPATVIAKRIGWTRSLTILKDRIRDIRPEYRGIDPADRVVHKPGDTVQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFP + VG GQ A LPVL MV YSR++ +++PSR + DL A W+L+ + AV
Sbjct 121 WFPEPRIAVGHGQ---AMMLPVLVMVATYSRYMCGVMVPSRRSGDLTAAMWQLLGQMNAV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
P L WD E AI RG T +AF G+L + +I ADPE KG +ER + YLE
Sbjct 178 PHRLWWDRESAIATTRG---VPTQSMRAFVGSLGTRAVIAPAADPEFKGGVERHNRYLES 234
Query 244 SFLPGRVFASPADFNAQLGAWLAL-VNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATG 302
SFLPGR F P DFNAQLG WLA N R RALG P + +R ML LPPVAP TG
Sbjct 235 SFLPGRRFTGPGDFNAQLGGWLAQDANQRVVRALGARPAEVFERERPLMLPLPPVAPTTG 294
Query 303 WCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQ 362
W +RL RD+YVR DSNDYSV P VIG V V ADL RV V C+ VA H R WA H
Sbjct 295 WHHRVRLGRDYYVRLDSNDYSVDPSVIGRMVEVHADLTRVWVTCEDRQVASHARCWADHA 354
Query 363 TVSDPAHVEAAKVLRRRHFSAASPVVEPQ-------------VQVRSLSDYDDALGVD 407
T++DPAHV A VLRR++ A+ E V +R+LSDYD G+D
Sbjct 355 TITDPAHVATAAVLRRQYQQTAAARAEQARLAGARTHADGTIVPLRALSDYDTLFGID 412
>gi|126434831|ref|YP_001070522.1| IS1533 transposase [Mycobacterium sp. JLS]
gi|126234631|gb|ABN98031.1| IS1533 transposase [Mycobacterium sp. JLS]
Length=264
Score = 371 bits (952), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 182/247 (74%), Positives = 201/247 (82%), Gaps = 0/247 (0%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
ML+VEDWAEIRRLHRAEGLPIKMIAR LGIS+NTV++AL S PKYER P GS VDA E
Sbjct 1 MLSVEDWAEIRRLHRAEGLPIKMIARTLGISRNTVRAALASEGPPKYERKPAGSAVDAFE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
IR L+ PTMPATVIAER+GW R + V S RV ELRP YLPPDPA RT+Y G+IAQ
Sbjct 61 DAIRVELKKTPTMPATVIAERVGWTRGMTVFSERVRELRPAYLPPDPAGRTSYDPGDIAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CD WFPP +PVG+GQTRT QLPVLTMV YSRWL A+LLPSR AEDLFAGWW+LI AL
Sbjct 121 CDLWFPPTTIPVGYGQTRTPTQLPVLTMVLGYSRWLSAILLPSRRAEDLFAGWWQLIAAL 180
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
GAVPR LVWDGEGAIGR RGGR ELT +CQAFRG L KV++ +PA+PE KG+IERAHDY
Sbjct 181 GAVPRTLVWDGEGAIGRNRGGRIELTRDCQAFRGVLGTKVVVLKPAEPEHKGIIERAHDY 240
Query 241 LERSFLP 247
ERSF P
Sbjct 241 FERSFGP 247
>gi|50955027|ref|YP_062315.1| transposase, ISlxx1-degenerated [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951509|gb|AAT89210.1| transposase, ISlxx1-degenerated [Leifsonia xyli subsp. xyli str.
CTCB07]
Length=355
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/359 (54%), Positives = 236/359 (66%), Gaps = 7/359 (1%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
M+ VEDWAEIRRL+ AEGLPIK I R LGIS+NTV++AL S++ P+Y+R P GS+VD E
Sbjct 1 MIAVEDWAEIRRLYAAEGLPIKEIVRRLGISRNTVRAALRSDRPPEYQRPPAGSLVDPFE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
P+IR LL +P MP+TVIAER+GW+ S + ARV+ LRP Y DP RT+Y GEIAQ
Sbjct 61 PQIRALLAQFPRMPSTVIAERVGWQHSASIFRARVSALRPEYQGVDPVQRTSYQPGEIAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEAL 180
CD WFP + V GQ R LPVL M +SR +LA ++PSR A D+ AG W LIE +
Sbjct 121 CDLWFPETPVFVAPGQERV---LPVLVMTLGFSRTILATMIPSRQAGDVLAGMWLLIEQV 177
Query 181 GAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDY 240
G VP+ LVWD E AI GG +LTT AF GTLA ++L+ DPE KG++ERA+ Y
Sbjct 178 GRVPKTLVWDREAAI----GGTGKLTTPAAAFAGTLATRILLAPARDPEFKGMVERANGY 233
Query 241 LERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
LE SFLPGR FASPADFN QL WL NTR R+ G P D + DR ML LP +AP
Sbjct 234 LETSFLPGRQFASPADFNEQLTGWLIRANTRRVRSTGTRPIDLLDTDRQGMLPLPRLAPQ 293
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWA 359
TG +RL RD++V D NDYS P IG + A E V + +G ++ HER WA
Sbjct 294 TGLRNRIRLARDYHVHVDGNDYSADPRHIGKNTDLVATGEAVTIASNGTVIGRHERCWA 352
>gi|325962426|ref|YP_004240332.1| transposase [Arthrobacter phenanthrenivorans Sphe3]
gi|325964153|ref|YP_004242059.1| transposase [Arthrobacter phenanthrenivorans Sphe3]
gi|325964799|ref|YP_004242705.1| transposase [Arthrobacter phenanthrenivorans Sphe3]
gi|323468513|gb|ADX72198.1| transposase [Arthrobacter phenanthrenivorans Sphe3]
gi|323470240|gb|ADX73925.1| transposase [Arthrobacter phenanthrenivorans Sphe3]
gi|323470886|gb|ADX74571.1| transposase [Arthrobacter phenanthrenivorans Sphe3]
Length=385
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/391 (50%), Positives = 246/391 (63%), Gaps = 9/391 (2%)
Query 21 IKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRIRELLQAYPTMPATVIAE 80
++ IA LGIS+NTV A+ ++ P Y RAPQ S + VEP IR LL+ P +PATV+AE
Sbjct 1 MRSIAARLGISRNTVAKAVSADGPPTYVRAPQDSGIKTVEPAIRALLRENPRIPATVLAE 60
Query 81 RIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDFWFPPIELPVGFGQTRTA 140
R+GW S VA +RP + P DPA R +Y G+ AQCD WFP + +PVG + R
Sbjct 61 RVGWSGSPAWFRENVARIRPEFAPADPADRISYEPGDQAQCDLWFPEVRIPVGSEKPRV- 119
Query 141 KQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAVPRVLVWDGEGAIGRWRG 200
LPVL MV ++SR+++A ++PSR DL AG W LI +LGAVPR L+WD E IGR
Sbjct 120 --LPVLVMVSSHSRFIMARMIPSRMTGDLLAGMWELIGSLGAVPRRLIWDNETGIGR--- 174
Query 201 GRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLERSFLPGRVFASPADFNAQ 260
R+ AF G LA +++ +P DPE+KG++ERA+ +LE SFLPGR FASP DFNAQ
Sbjct 175 -RNSYAAGVAAFAGVLATRIVQVKPYDPESKGVVERANQFLETSFLPGRTFASPEDFNAQ 233
Query 261 LGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATGWCTSLRLPRDHYVRCDSN 320
L WL N R R G P + I D+AAML LPPV P TG+ T +RLPRD+YVR SN
Sbjct 234 LSQWLPKANNRMVRRTGARPAELIRQDKAAMLGLPPVPPVTGFATRVRLPRDYYVRMGSN 293
Query 321 DYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQTVSDPAHVEAAKVLRRRH 380
DYSVHP IG V V ADLE V + DG V H R W TV+D HVEAA+ +R+
Sbjct 294 DYSVHPQAIGRFVDVTADLETVTISLDGRCVGCHPRSWGAGLTVTDSDHVEAARTMRKAF 353
Query 381 FSAASPVVEPQVQVRSLSDYDDALGVDIDGG 411
+ A P +R L+DYD A GV +D G
Sbjct 354 QNPAPPT--DTAGLRDLADYDRAFGVVLDDG 382
>gi|120404855|ref|YP_954684.1| integrase catalytic subunit [Mycobacterium vanbaalenii PYR-1]
gi|119957673|gb|ABM14678.1| Integrase, catalytic region [Mycobacterium vanbaalenii PYR-1]
Length=405
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/408 (48%), Positives = 245/408 (61%), Gaps = 12/408 (2%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDA-VEPR 62
+EDWAEIRRL+R E L IAR L +S+NTV A+ + P+YERAP + A VE
Sbjct 1 MEDWAEIRRLYRFENLSPAAIARRLSLSRNTVAKAINAEAPPRYERAPSTTSAWAQVELA 60
Query 63 IRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCD 122
+R LL +PTMPATV+A+R+GW + V +RP Y P P R ++ GE QCD
Sbjct 61 VRLLLGQFPTMPATVLAQRVGWTGGHSWFAENVTRIRPEYPPAGPCDRLVHLPGEQVQCD 120
Query 123 FWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLI-EALG 181
WFP +P G + PVL MV AYSR++ A+++PSR DL AG W+LI +G
Sbjct 121 LWFPGQLVP---GHGGGLRSFPVLVMVAAYSRFIAAIMIPSRVTGDLLAGMWQLIARDIG 177
Query 182 AVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYL 241
VPR L+WD E IG+ R L F G L +++ RP DPE KG++ERA+ YL
Sbjct 178 GVPRSLLWDNESGIGQ----RRHLAQGVAGFCGVLGTRLIQARPYDPETKGVVERANGYL 233
Query 242 ERSFLPGRVFASPADFNAQLGAWL-ALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
+ SFLPGR FASPADFNAQL +WL A N RT P D + ADRAAM +LPPVAP
Sbjct 234 DTSFLPGRTFASPADFNAQLQSWLGAYANNRTHAGTRMIPVDALVADRAAMAALPPVAPV 293
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
TG + RL RD+YV N YS++P VIG + VRA L+R+ C +VADHER+W
Sbjct 294 TGTAVTTRLGRDYYVSVGGNAYSINPEVIGRMITVRASLDRITALCGDRVVADHERLWGT 353
Query 361 HQTVSDPAHVEAAKVLRRRHFS--AASPVVEPQVQVRSLSDYDDALGV 406
V+DP HV AA VLR + S AAS +E V+V L YD G
Sbjct 354 AGLVADPEHVAAAAVLREQFHSRPAASAHLEVSVEVADLGAYDAIFGT 401
>gi|291010161|ref|ZP_06568124.1| IS21 family transposase [Saccharopolyspora erythraea NRRL 2338]
Length=306
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 174/307 (57%), Positives = 207/307 (68%), Gaps = 3/307 (0%)
Query 94 RVAELRPVYLPPDPASRTTYVAGEIAQCDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYS 153
RV ELRP++LPPDP SRT Y GE+AQCD WFPP+++P+GFGQ + PVL MV YS
Sbjct 3 RVRELRPLFLPPDPVSRTVYQPGELAQCDLWFPPVDIPLGFGQV---GRPPVLVMVSGYS 59
Query 154 RWLLAMLLPSRCAEDLFAGWWRLIEALGAVPRVLVWDGEGAIGRWRGGRSELTTECQAFR 213
R + A L+PSR DL AG W L+ G VP+ LVWD E A+G + GR LT AFR
Sbjct 60 RVIAARLIPSRQGPDLLAGHWALLSGWGRVPKTLVWDNESAVGFRKAGRPVLTEAMNAFR 119
Query 214 GTLAAKVLICRPADPEAKGLIERAHDYLERSFLPGRVFASPADFNAQLGAWLALVNTRTR 273
GTL V+ CRPADPEAKGL+ER + YLE SFLPGR F PADFNAQL WL N R
Sbjct 120 GTLGIAVIQCRPADPEAKGLVERVNGYLETSFLPGRSFTGPADFNAQLAGWLRRANQRHH 179
Query 274 RALGCAPTDRIGADRAAMLSLPPVAPATGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRV 333
R LGC PTDR DR AML+LPPVAP GW +RLPRDHY+R +NDYSVHP IGHRV
Sbjct 180 RVLGCKPTDRWEHDRQAMLTLPPVAPVVGWHAGIRLPRDHYIRLGANDYSVHPSAIGHRV 239
Query 334 LVRADLERVHVFCDGELVADHERIWAVHQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQ 393
+ DL+ V V C G LVA H+R WA HQ+++D H AA LR++ A+ V+ V+
Sbjct 240 EITGDLDTVTVACQGRLVARHDRCWAAHQSITDSDHATAAARLRQQVRRASLRPVDTPVE 299
Query 394 VRSLSDY 400
R L+DY
Sbjct 300 HRELADY 306
>gi|334337226|ref|YP_004542378.1| Integrase catalytic region [Isoptericola variabilis 225]
gi|334107594|gb|AEG44484.1| Integrase catalytic region [Isoptericola variabilis 225]
Length=286
Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 172/286 (61%), Positives = 201/286 (71%), Gaps = 3/286 (1%)
Query 2 LTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEP 61
+TVEDWAEIRRLHR E + IK IAR LG+S+N V+ AL ++ P+YERA +GSIVDAVEP
Sbjct 1 MTVEDWAEIRRLHRVEKMAIKAIARRLGVSRNAVRRALARDEPPRYERASKGSIVDAVEP 60
Query 62 RIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQC 121
IRELL+ P MPATVIAERIGW RS+ VL RV E+RP YLPPDPA+RT Y G QC
Sbjct 61 AIRELLRKTPDMPATVIAERIGWTRSLTVLEDRVREIRPYYLPPDPATRTAYDPGHRVQC 120
Query 122 DFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALG 181
D WFPP ++P+G GQ + PVL M YSR L A+++PSR A DL G W+L++ +G
Sbjct 121 DLWFPPADVPLGAGQVGSP---PVLVMTAGYSRMLFAVMIPSRQAPDLILGHWQLLQQMG 177
Query 182 AVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYL 241
AVPR LVWD E A+G WR GR L E + FRGTL V CRP DPEAKGL+ERA+ Y
Sbjct 178 AVPRELVWDNEAAVGSWRAGRPRLAEEFEVFRGTLGIGVRQCRPGDPEAKGLVERANGYF 237
Query 242 ERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGAD 287
E SFLPGR F S ADFNAQL WL N R R+LGC P R D
Sbjct 238 ETSFLPGRTFTSAADFNAQLTTWLVRANGRHHRSLGCRPVQRWDTD 283
>gi|134097029|ref|YP_001102690.1| transposase, ISlxx1-degenerated [Saccharopolyspora erythraea
NRRL 2338]
gi|133909652|emb|CAL99764.1| transposase, ISlxx1-degenerated [Saccharopolyspora erythraea
NRRL 2338]
Length=277
Score = 335 bits (859), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 166/280 (60%), Positives = 197/280 (71%), Gaps = 3/280 (1%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRLHR EG+PI+ I R LG+ +NTV+ AL S P+Y+R +GS+VDAVEP+I
Sbjct 1 MEDWAEIRRLHRCEGMPIRAIVRKLGVGRNTVRRALASEGPPRYQRPSKGSVVDAVEPQI 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R LL +PTMP VIAERIGW+R + VL RV ELRP++LPPDP SRT Y GE+AQCD
Sbjct 61 RALLAEWPTMPVPVIAERIGWQRGLTVLKDRVRELRPLFLPPDPVSRTVYQPGELAQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFPP+++P+GFGQ + PVL MV YSR + A L+PSR DL AG W L+ G V
Sbjct 121 WFPPVDIPLGFGQV---GRPPVLVMVSGYSRVIAARLIPSRQGPDLLAGHWALLSGWGRV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
P+ LVWD E A+G + GR LT AFRGTL V+ CR DPEAKGL+ERA+ YLE
Sbjct 178 PKTLVWDNESAVGFRKAGRPVLTEAMNAFRGTLGIAVIQCRLGDPEAKGLVERANGYLET 237
Query 244 SFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDR 283
SFLPGR F SPADFN QL WL N R R LGC P DR
Sbjct 238 SFLPGRRFTSPADFNTQLADWLVRANQRHHRILGCRPADR 277
>gi|25777791|gb|AAN75599.1| ORFL4 [Saccharopolyspora erythraea NRRL 2338]
Length=293
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/284 (59%), Positives = 198/284 (70%), Gaps = 3/284 (1%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRLHR EG+PI+ I R LG+ +NTV+ AL S P+Y+R +GS+VDAVEP+I
Sbjct 1 MEDWAEIRRLHRCEGMPIRAIVRKLGVGRNTVRRALASEGPPRYQRPSKGSVVDAVEPQI 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R LL +PTMP VIAERIGW+R + VL RV ELRP++LPPDP SRT Y GE+AQCD
Sbjct 61 RALLAEWPTMPVPVIAERIGWQRGLTVLKDRVRELRPLFLPPDPVSRTVYQPGELAQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFPP+++P+GFGQ + PVL MV YSR + A L+PSR DL AG W L+ G V
Sbjct 121 WFPPVDIPLGFGQV---GRPPVLVMVSGYSRVIAARLIPSRQGPDLLAGHWALLSGWGRV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
P+ LVWD E A+G + GR LT AFRGTL V+ CR DPEAKGL+ERA+ YLE
Sbjct 178 PKTLVWDNESAVGFRKAGRPVLTEAMNAFRGTLGIAVIQCRLGDPEAKGLVERANGYLET 237
Query 244 SFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGAD 287
SFLPGR F SPADFN QL WL N R R LGC P DR D
Sbjct 238 SFLPGRRFTSPADFNTQLADWLVRANQRHHRILGCRPADRWEHD 281
>gi|134097351|ref|YP_001103012.1| transposase, ISlxx1-degenerated [Saccharopolyspora erythraea
NRRL 2338]
gi|134101622|ref|YP_001107283.1| transposase [Saccharopolyspora erythraea NRRL 2338]
gi|133909974|emb|CAM00086.1| transposase, ISlxx1-degenerated [Saccharopolyspora erythraea
NRRL 2338]
gi|133914245|emb|CAM04358.1| transposase [Saccharopolyspora erythraea NRRL 2338]
Length=293
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/284 (59%), Positives = 198/284 (70%), Gaps = 3/284 (1%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRLHR EG+PI+ I R LG+ +NTV+ AL S P+Y+R +GS+VDAVEP+I
Sbjct 1 MEDWAEIRRLHRCEGMPIRAIVRKLGVGRNTVRRALASEGPPRYQRPSKGSVVDAVEPQI 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R LL +PTMP VIAERIGW+R + VL RV ELRP++LPPDP SRT Y GE+AQCD
Sbjct 61 RALLAEWPTMPVPVIAERIGWQRGLTVLKDRVRELRPLFLPPDPVSRTVYQPGELAQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFPP+++P+GFGQ + PVL MV YSR + A L+PSR DL AG W L+ G V
Sbjct 121 WFPPVDIPLGFGQV---GRPPVLVMVSGYSRVIAARLIPSRQGPDLLAGHWALLSGWGRV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
P+ LVWD E A+G + GR LT AFRGTL V+ CR DPEAKGL+ERA+ YLE
Sbjct 178 PKTLVWDNESAVGFRKAGRPVLTEAMNAFRGTLGIAVIQCRLGDPEAKGLVERANGYLET 237
Query 244 SFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGAD 287
SFLPGR F SPADFN QL WL N R R LGC P DR D
Sbjct 238 SFLPGRRFTSPADFNTQLADWLVRANQRHHRILGCRPADRWEHD 281
>gi|258653752|ref|YP_003202908.1| Integrase catalytic subunit [Nakamurella multipartita DSM 44233]
gi|258653842|ref|YP_003202998.1| Integrase catalytic subunit [Nakamurella multipartita DSM 44233]
gi|258556977|gb|ACV79919.1| Integrase catalytic region [Nakamurella multipartita DSM 44233]
gi|258557067|gb|ACV80009.1| Integrase catalytic region [Nakamurella multipartita DSM 44233]
Length=407
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 200/410 (49%), Positives = 258/410 (63%), Gaps = 11/410 (2%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWA IRRL A+G+P + +AR LGI + TV AL S++QPKYER + EP +
Sbjct 1 MEDWALIRRLV-ADGVPQRQVARDLGIGRATVARALASDRQPKYERPVVPTSFTPFEPAV 59
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R+LL P MPATVIAER+GW SI V +LRP + P DP+ R ++ G+ AQCD
Sbjct 60 RQLLATTPDMPATVIAERVGWTGSITWFRDNVRQLRPEHRPADPSDRLIWLPGDAAQCDL 119
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFPP ++ + G + LPV+ + A+SR+++A ++P+R DL W L++ LG V
Sbjct 120 WFPPKKIRLEDG---SKTLLPVMVITAAHSRFMVAKMIPTRHTADLLLAMWLLLQLLGRV 176
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
PR L+WD E IGR G R AF G LA ++ +P DPE+KG++ER + Y E
Sbjct 177 PRRLIWDNESGIGR--GKRH--AEGVGAFTGALATTLIRLKPYDPESKGVVERRNGYFET 232
Query 244 SFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATGW 303
SF+PGR F SPADF+AQ WL + N R R + P DR+ ADRAAML LPPV PA GW
Sbjct 233 SFMPGRDFTSPADFDAQFTDWLTIANARVVRTIKARPIDRLDADRAAMLPLPPVPPAVGW 292
Query 304 CTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQT 363
+RL RD+YVR DSNDYSV P VIG V V ADL RV V +G LVA HER+WA Q
Sbjct 293 INRVRLGRDYYVRVDSNDYSVDPAVIGRFVDVTADLARVQVRHEGRLVAAHERVWARGQV 352
Query 364 VSDPAHVEAAKVLRRR-HFSAASPVVEPQVQVRSLSDYDDALGVDIDGGV 412
V+DPAHV AAK LR + +P ++ R L+DYD A G+ I GG+
Sbjct 353 VTDPAHVAAAKALREQLQLPRPAPGHHDEL-ARDLADYDRAFGL-ITGGL 400
>gi|289755764|ref|ZP_06515142.1| IS21 family transposase IstA [Mycobacterium tuberculosis EAS054]
gi|289696351|gb|EFD63780.1| IS21 family transposase IstA [Mycobacterium tuberculosis EAS054]
Length=298
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/298 (56%), Positives = 196/298 (66%), Gaps = 8/298 (2%)
Query 114 VAGEIAQCDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGW 173
+AGEI QCDFWFP + +PVG+GQ RTA LPVLTMVC YSRW A+L+P+R AEDL+AGW
Sbjct 1 MAGEIGQCDFWFPDVVVPVGYGQVRTATALPVLTMVCGYSRWASALLIPTRTAEDLYAGW 60
Query 174 WRLIEALGAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGL 233
W+ + LGAVPRVLVWDGEGA+GRW + ELT C AFRGTLAAKV IC+P P+ +G
Sbjct 61 WQHLSTLGAVPRVLVWDGEGAVGRWWARQPELTAACHAFRGTLAAKVWICKPVIPKPRGW 120
Query 234 IE-RAHDYLERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGA---DRA 289
+ RS G + + W + T C DR A D A
Sbjct 121 SNVSTTTWSGRSCRVGSLPLRRISIPSCRPGWCGPITASTE----CWDVDRQIASRPDTA 176
Query 290 AMLSLPPVAPATGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGE 349
AML+LPPV P+ GW TS RLPRDHYVR D NDYSVHP IG R+ + ADL RV V+C G
Sbjct 177 AMLTLPPVGPSIGWRTSTRLPRDHYVRLDGNDYSVHPVAIGRRIEITADLSRVRVWCGGT 236
Query 350 LVADHERIWAVHQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVD 407
LVADH+RIWA HQT+SDP HV AAK+LRR+ F P +V+ R L+ YD LG+D
Sbjct 237 LVADHDRIWAKHQTISDPEHVVAAKLLRRKRFDIVGPPHHVEVEQRLLTTYDTVLGLD 294
>gi|343928086|ref|ZP_08767549.1| putative transposase [Gordonia alkanivorans NBRC 16433]
gi|343762002|dbj|GAA14475.1| putative transposase [Gordonia alkanivorans NBRC 16433]
Length=316
Score = 312 bits (800), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 168/323 (53%), Positives = 209/323 (65%), Gaps = 9/323 (2%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+E WAEIRRLHR+EG+PIK IAR LG+++NTV++AL S+ P Y R +GS VDA EP+I
Sbjct 1 MEQWAEIRRLHRSEGVPIKEIARRLGVARNTVRAALASDTAPSYSRPSKGSAVDAFEPQI 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R LL+ YPTMPATVIA+RIGW RS+ VL RV +RP + DPA R Y G +Q D
Sbjct 61 RALLREYPTMPATVIAQRIGWSRSLTVLKDRVRVIRPEFRGVDPADRVIYQPGGCSQWDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFP +PVG Q LPVL M A+SR+ A+++PSR D+ AG W L+ LGAV
Sbjct 121 WFPDYRIPVGHNQL---SMLPVLVMTLAFSRYRSAVMIPSRQGGDILAGMWLLLSQLGAV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
R LVWD E AI GG+ + T F G+L ++ + P DPE KG++ER + + E
Sbjct 178 TRKLVWDRESAI----GGKGKPTALAAGFVGSLGTRLELAPPCDPEYKGMVERNNRFFET 233
Query 244 SFLPGRVFASPADFNAQLGAWLA-LVNTRTRRALGC-APTDRIGADRAAMLSLPPVAPAT 301
SFLPGR FASPADF AQ WLA NTR R++G P D + D A M +LPP AP
Sbjct 234 SFLPGRHFASPADFTAQFDRWLADYANTRVVRSIGDRRPCDVLTEDLAQMATLPPSAPQV 293
Query 302 GWCTSLRLPRDHYVRCDSNDYSV 324
G T +RL RD+YVR NDYSV
Sbjct 294 GLSTRVRLGRDYYVRVAGNDYSV 316
>gi|256826339|ref|YP_003150299.1| integrase family protein [Kytococcus sedentarius DSM 20547]
gi|256689732|gb|ACV07534.1| integrase family protein [Kytococcus sedentarius DSM 20547]
Length=333
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/337 (50%), Positives = 211/337 (63%), Gaps = 13/337 (3%)
Query 73 MPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDFWFPPIELPV 132
MPATV+AER+GW SIR V LR + P DPA R T+ AG++AQ D WFPP ++ +
Sbjct 1 MPATVLAERVGWTGSIRWFRDNVNRLRVDHRPIDPADRLTWTAGDVAQRDLWFPPRKILL 60
Query 133 GFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAVPRVLVWDGE 192
G +RT LPVL M C YSR+ L ++P+R DL G W L++ LG VPR L+WD E
Sbjct 61 EDG-SRTL--LPVLVMTCGYSRFTLGRMIPTRKTPDLLLGTWELLDQLGRVPRRLIWDNE 117
Query 193 GAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLERSFLPGRVFA 252
IGR +LT F GTLA KV++ P DPE+KG++ER + + E SF+PGR FA
Sbjct 118 PGIGR-----GKLTEPVAVFAGTLATKVVLLPPRDPESKGIVERRNRFFETSFMPGRHFA 172
Query 253 SPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATGWCTSLRLPRD 312
SP DFNAQ WL+ N RT R + PT+ + AD+ AML+LPP GW +RL RD
Sbjct 173 SPGDFNAQFTDWLSTANARTVRTIKARPTELLAADKEAMLALPPAVLHLGWRNHVRLGRD 232
Query 313 HYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQTVSDPAHVEA 372
+YVR D+NDYSVHP IG RV V ADL+ V V G+LVA+H R WA T++DPAHV A
Sbjct 233 YYVRVDTNDYSVHPRAIGARVDVAADLDVVRVRHGGQLVAEHPRRWARSMTITDPAHVTA 292
Query 373 AKVLRRRHFSAASPVVEPQVQ--VRSLSDYDDALGVD 407
A LR + P P+ VR L+DYD A G+D
Sbjct 293 AAGLR---HAYQHPRSRPEADDLVRDLADYDKAFGID 326
>gi|288924487|ref|ZP_06418453.1| Integrase catalytic region [Frankia sp. EUN1f]
gi|288344166|gb|EFC78729.1| Integrase catalytic region [Frankia sp. EUN1f]
Length=273
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/279 (55%), Positives = 192/279 (69%), Gaps = 7/279 (2%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRLHRAEG+ I I+R LGI++NTV+ AL S++ P+YERAP+ + DAVEP +
Sbjct 1 MEDWAEIRRLHRAEGVSISEISRRLGIARNTVRRALVSDRPPRYERAPRRRLTDAVEPAV 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R LL YP MPA+VIA+RIGW S +L R++++RP Y DP R TY G++AQCD
Sbjct 61 RALLAEYPRMPASVIAQRIGWTHSSSILRDRISQIRPEYAGVDPVDRVTYEPGQVAQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFP ++PVG+GQTRT LPVL M A+SR+ A ++PSR D+ AG W+LI +G V
Sbjct 121 WFPEPKIPVGWGQTRT---LPVLVMTVAFSRFTTATMIPSRQGGDILAGMWQLISQVGRV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLER 243
PR LVWD E AI GG ++ AF GTLA ++ + P DPE KG++ER + +LE
Sbjct 178 PRTLVWDRESAI----GGSGRVSGPAAAFAGTLATRIRLAPPRDPEFKGMVERTNRFLET 233
Query 244 SFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTD 282
SFLPGR SP DFNAQL +WLA NTR RA G P D
Sbjct 234 SFLPGRTVTSPIDFNAQLESWLAQANTRRVRATGTRPVD 272
>gi|331698617|ref|YP_004334856.1| Integrase catalytic region [Pseudonocardia dioxanivorans CB1190]
gi|326953306|gb|AEA27003.1| Integrase catalytic region [Pseudonocardia dioxanivorans CB1190]
Length=370
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 166/361 (46%), Positives = 212/361 (59%), Gaps = 20/361 (5%)
Query 62 RIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQC 121
++R LL +PTMP VIA++IGW S L +A +RP Y+ DP+ RT Y GEIAQC
Sbjct 2 QVRALLVQWPTMPGPVIAQKIGWPYSEGPLKKLLARIRPEYVGIDPSDRTVYEPGEIAQC 61
Query 122 DFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALG 181
D WFP +PV Q R LPVL + A+SR+L A ++PSR D+ +G W LI LG
Sbjct 62 DLWFPETPIPVAARQVRI---LPVLVLTLAFSRFLSATMIPSRQGGDILSGMWLLISQLG 118
Query 182 AVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYL 241
VP+ LVWD E AIG G +++ AF GTLA ++ + P DPE KG++ER + +
Sbjct 119 RVPKTLVWDRESAIG----GTGKVSVPAAAFAGTLATRIRLAPPKDPEFKGMVERNNGFF 174
Query 242 ERSFLPGRVFASPADFNAQLGAWL-ALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPA 300
E SFLPGR FASPADFN+Q WL + NTRT RA+ P D + D AM LP VAP
Sbjct 175 ETSFLPGRAFASPADFNSQFTDWLTSRANTRTVRAIHGRPVDLLETDYQAMTVLPAVAPT 234
Query 301 TGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAV 360
G +RL RD+YVR D+ DYSV P VIG V + A V VFCD +LVA H+R WA
Sbjct 235 VGLTHRIRLARDYYVRVDTCDYSVDPRVIGRFVDIVASPTTVEVFCDRQLVARHDRSWAK 294
Query 361 HQTVSDPAHVEAAKVLRR---RHFSAASPVVEPQ---------VQVRSLSDYDDALGVDI 408
H ++DP HV A+ +R+ H A + V +R+L DYD GVD
Sbjct 295 HLVITDPDHVATARQMRQALAEHHRAQQQAGQRGQRRHSDGHPVAIRALPDYDALFGVDF 354
Query 409 D 409
D
Sbjct 355 D 355
>gi|288924431|ref|ZP_06418418.1| Integrase catalytic region [Frankia sp. EUN1f]
gi|288344223|gb|EFC78765.1| Integrase catalytic region [Frankia sp. EUN1f]
Length=317
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/313 (50%), Positives = 187/313 (60%), Gaps = 17/313 (5%)
Query 106 DPASRTTYVAGEIAQCDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRC 165
DP R TY G++AQCD WFP ++PVG+GQTRT LPVL M A+SR+ A ++PSR
Sbjct 1 DPVDRVTYEPGQVAQCDLWFPEPKIPVGWGQTRT---LPVLVMTVAFSRFTTATMIPSRQ 57
Query 166 AEDLFAGWWRLIEALGAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRP 225
D+ AG W+LI +G VPR LVWD E AIG G ++ AF GTLA ++ + P
Sbjct 58 GGDILAGMWQLISQVGRVPRTLVWDRESAIG----GSGRVSGPAAAFAGTLATRIRLAPP 113
Query 226 ADPEAKGLIERAHDYLERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIG 285
DPE KG++ER + +LE SFLPGR SP DFNAQL +WLA NTR RA G P D +
Sbjct 114 RDPEFKGMVERTNRFLETSFLPGRTVTSPIDFNAQLESWLAQANTRRVRATGTRPVDLLE 173
Query 286 ADRAAMLSLPPVAPATGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVF 345
DR AML+LPPV P G +RL RD+YVR D DYSV P IG V V A V V
Sbjct 174 TDRQAMLALPPVGPEVGLAHRIRLARDYYVRLDGVDYSVDPAAIGRFVEVTASAWTVTVT 233
Query 346 CDGELVADHERIWAVHQTVSDPAHVEAAKVLRRRHFSAASPVVEPQ----------VQVR 395
CDG+ VA H+R WA H ++DPAH A LRR H A+ Q V +R
Sbjct 234 CDGQPVASHDRCWARHTVITDPAHRATATRLRRDHADQAAARRRHQSLRQHADGHVVALR 293
Query 396 SLSDYDDALGVDI 408
+L DYD GVD
Sbjct 294 ALPDYDALFGVDF 306
>gi|134101519|ref|YP_001107180.1| IS21 family transposase [Saccharopolyspora erythraea NRRL 2338]
gi|133914142|emb|CAM04255.1| IS21 family transposase [Saccharopolyspora erythraea NRRL 2338]
Length=264
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/255 (57%), Positives = 169/255 (67%), Gaps = 1/255 (0%)
Query 156 LLAMLLPSRCAEDLFAGWWRLIEALGAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGT 215
+ A +LPSR DL AG W L+ G VP+ LVWD E A+G + GR LT AFRGT
Sbjct 2 ITARMLPSRQGPDLLAGHWALLSGWGRVPKTLVWDNESAVGFRKAGRPVLTEAMNAFRGT 61
Query 216 LAAKVLICRPADPEAKGLIERAHDYLERSFLPGRVFASPADFNAQLGAWLALVNTRTRRA 275
L V+ CR DPEAKGL+ERA+ YLE SFLPGR F SPADFN QL WL N R R
Sbjct 62 LGIAVIQCRLGDPEAKGLVERANGYLETSFLPGRRFTSPADFNTQLADWLVRANQRHHRI 121
Query 276 LGCAPTDRIGADRAAMLSLPPVAPATGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLV 335
LGC P DR DR AML+LPPVAP TGW S+RLPRDHYVR +NDYSVHP IGHRV +
Sbjct 122 LGCRPADRWEHDRQAMLALPPVAPVTGWRASIRLPRDHYVRLGANDYSVHPSAIGHRVEI 181
Query 336 RADLERVHVFCD-GELVADHERIWAVHQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQV 394
DLE V V C G LVA H+R WA HQ+++DP H AA LR++ A+ V+ V+
Sbjct 182 TGDLEHVEVSCQGGGLVARHQRCWAAHQSITDPDHATAAARLRQQARRASLRPVDTPVEH 241
Query 395 RSLSDYDDALGVDID 409
R L+DYD ALG+D D
Sbjct 242 RELADYDRALGLDTD 256
>gi|134098406|ref|YP_001104067.1| IS21 family transposase [Saccharopolyspora erythraea NRRL 2338]
gi|133911029|emb|CAM01142.1| IS21 family transposase [Saccharopolyspora erythraea NRRL 2338]
Length=304
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/229 (59%), Positives = 161/229 (71%), Gaps = 3/229 (1%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWAEIRRLHR EG+PI+ I R LG+ +NTV+ AL S P+Y+R +GS+VDAVEP+I
Sbjct 1 MEDWAEIRRLHRCEGMPIRAIVRKLGVGRNTVRRALASEGPPRYQRPSKGSVVDAVEPQI 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R LL +PTMP VIAERIGW R + VL RV ELRP++LPPDP SRT Y GE+AQCD
Sbjct 61 RALLAEWPTMPVPVIAERIGWLRGLTVLKDRVRELRPLFLPPDPVSRTVYQPGELAQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAV 183
WFPP+++P+GFGQ + PVL MV YSR + A L+PSR DL AG W L+ G V
Sbjct 121 WFPPVDIPLGFGQV---GRPPVLVMVSGYSRVIAARLIPSRQGPDLLAGHWALLSGWGRV 177
Query 184 PRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKG 232
P+ LVWD E A+G + GR LT AFRGTL V+ CR DPEAKG
Sbjct 178 PKTLVWDNESAVGFRKAGRPVLTEAMNAFRGTLGIAVIQCRLGDPEAKG 226
>gi|298346899|ref|YP_003719586.1| IS21 family transposase [Mobiluncus curtisii ATCC 43063]
gi|298236960|gb|ADI68092.1| IS21 family transposase [Mobiluncus curtisii ATCC 43063]
Length=329
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/307 (46%), Positives = 172/307 (57%), Gaps = 7/307 (2%)
Query 73 MPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDFWFPPIELPV 132
MPATVIAERIGW RS R+L VA +RP +LP DPA R + G+ QCD WFPP ++P+
Sbjct 1 MPATVIAERIGWPRSGRLLRYHVALIRPEFLPIDPADRLEWDIGDAVQCDLWFPPYKVPL 60
Query 133 GFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLIEALGAVPRVLVWDGE 192
G+ +PV M CAYSR+ + +++P+R DL G W ++ G VPR +WD E
Sbjct 61 DDGRECL---VPVFVMACAYSRYTVCVVIPTRTTADLLQGMWEGVQRFGGVPRRFIWDNE 117
Query 193 GAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKGLIERAHDYLERSFLPGRVFA 252
IGR + L F G L A + P DPE+KG IER + Y E SF+PGR F
Sbjct 118 SGIGR----GNHLAAGVSGFMGVLGATLKQLPPRDPESKGTIERFNRYAETSFMPGRHFL 173
Query 253 SPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATGWCTSLRLPRD 312
SP D AQL W+ N RT L P + + SLPPV P GW +RL RD
Sbjct 174 SPQDLQAQLDDWMVKANGRTHATLHAIPAEMYQEELTHFASLPPVKPQCGWFKEVRLGRD 233
Query 313 HYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQTVSDPAHVEA 372
+YV D N YSV P I V VRADL V V C G LVA H R W T+ DPAHV
Sbjct 234 YYVSLDGNHYSVSPECIAALVQVRADLNTVSVTCKGSLVAKHRRAWGSGITIKDPAHVAK 293
Query 373 AKVLRRR 379
A+ LR +
Sbjct 294 ARQLREK 300
>gi|20043267|gb|AAM09085.1| Tpase1 [Frankia sp. Ar15]
Length=311
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/309 (46%), Positives = 172/309 (56%), Gaps = 25/309 (8%)
Query 113 YVAGEIAQCDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAG 172
Y GE A CD WFP +PVG GQ R LPVL M A+SR+L A ++PSR A D+ AG
Sbjct 3 YEPGEFAHCDLWFPEPVIPVGAGQERV---LPVLVMTLAFSRFLTATMIPSRQAGDILAG 59
Query 173 WWRLIEALGAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPEAKG 232
W LI +G V + LVWD E AIG G ++ F GTLA ++ + P DPE KG
Sbjct 60 MWLLIGRVGRVTKTLVWDRESAIG----GTGRVSAPAAGFAGTLATQIRLAPPRDPEYKG 115
Query 233 LIERAHDYLERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAML 292
++ERA+ Y E SFLPGR F SP DFN QL WL L N RT R++G P D + D +ML
Sbjct 116 IVERANGYFETSFLPGRRFVSPEDFNIQLAEWLTLANARTVRSVGGRPVDLLETDLRSML 175
Query 293 SLPPVAPATGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVA 352
LPPV P TG +RL RD+YVR D+ DYSV P IG V V A L+ V V CDG+ VA
Sbjct 176 ELPPVDPLTGLSARVRLGRDYYVRVDTVDYSVDPRAIGRFVDVTASLDTVAVTCDGQPVA 235
Query 353 DHERIWAVHQTVSDPAH-------------VEAAKVLRRRHFSAASPVVEPQVQVRSLSD 399
H R WA H ++DP H + RH P V +R+L D
Sbjct 236 RHARSWARHGVITDPEHAAAAARMRQALAEDRRRRAAATRHHGDGHP-----VSMRALPD 290
Query 400 YDDALGVDI 408
YD GVD
Sbjct 291 YDALFGVDF 299
>gi|77454771|ref|YP_345639.1| putative transposase [Rhodococcus erythropolis PR4]
gi|77019771|dbj|BAE46147.1| putative transposase [Rhodococcus erythropolis PR4]
Length=255
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/249 (48%), Positives = 147/249 (60%), Gaps = 13/249 (5%)
Query 170 FAGWWRLIEALGAVPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPADPE 229
+G W LI LG VP+ LVWD E AIG G ++TT AF GTLA ++ + P DPE
Sbjct 1 MSGMWELISGLGKVPKTLVWDRESAIG----GTGKITTPAAAFAGTLATRIQLAPPRDPE 56
Query 230 AKGLIERAHDYLERSFLPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRA 289
KG++ERA+ YLE SFLPGR F SP DFNAQL WL NTRT RA+G P D + D A
Sbjct 57 YKGMVERANGYLETSFLPGRTFTSPPDFNAQLRDWLTRANTRTVRAIGGRPVDLLATDVA 116
Query 290 AMLSLPPVAPATGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGE 349
AM+ LPPV PA G +RL RD+YVR D DYS+ P VIG V V RV C+ +
Sbjct 117 AMIELPPVIPAIGLTHRIRLARDYYVRVDGADYSIDPRVIGRFVDVSPSPTRVVARCNDQ 176
Query 350 LVADHERIWAVHQTVSDPAHVEAAKVLRR---------RHFSAASPVVEPQVQVRSLSDY 400
+VA H+R WA H V+DP HV+ A LRR + + V +R+L DY
Sbjct 177 IVARHDRSWAKHVVVTDPDHVDTAAQLRRGLADERRRRTAAATRRHIDGHPVSLRALPDY 236
Query 401 DDALGVDID 409
D GVD++
Sbjct 237 DALFGVDLE 245
>gi|227548586|ref|ZP_03978635.1| IS21 family transposase [Corynebacterium lipophiloflavum DSM
44291]
gi|227079337|gb|EEI17300.1| IS21 family transposase [Corynebacterium lipophiloflavum DSM
44291]
Length=318
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/322 (41%), Positives = 171/322 (54%), Gaps = 17/322 (5%)
Query 95 VAELRPVYLPPDPASRTTYVAGEIAQCDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSR 154
V +RP Y DP + GE QCD FP +P G GQ PVL MV +YSR
Sbjct 8 VRRIRPDYQQADPVDTLIHRPGEQIQCDLTFPAGGIPDGSGQKVA---FPVLVMVASYSR 64
Query 155 WLLAMLLPSRCAEDLFAGWWRLIE-ALGAVPRVLVWDGEGAIGRWRGGRSELTTECQAFR 213
++ A +LP+R DL AG W L+ + AVP L+WD E IG+ LT +F
Sbjct 65 FMAARVLPTRTTADLVAGMWALLSTSFQAVPEQLLWDRETGIGQ-----KALTQPVLSFA 119
Query 214 GTLAAKVLICRPADPEAKGLIERAHDYLERSFLPGRVFASPADFNAQLGAWLALV-NTRT 272
G L ++ P DPE KG++ERA+ YL+ SF PGR F PAD QL W+ V N R
Sbjct 120 GILGTRIQQAPPRDPETKGVVERANGYLKSSFFPGRDFTCPADVQRQLDEWITEVANQRI 179
Query 273 RRALGCAPTDRIGADRAAMLSLPPVAPATGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHR 332
P D+A M +LPP P +RLPR++YV D+N YSV P +I
Sbjct 180 HATTRKIPAVAWTVDKAHMAALPPYPPQIDVLRQVRLPRNYYVAVDANHYSVDPRMINRI 239
Query 333 VLVRADLERVHVFC-DGELVADHERIWAVHQTVSDPAHVEAAKVLRRRHFSAASPVVEPQ 391
V V A LE+V V DG +VA HER+W HQT++DP H AK +RR+ A+P V PQ
Sbjct 240 VTVHAGLEQVVVRAPDGTIVARHERVWGTHQTITDPMHAATAKQMRRQ---LATPPVSPQ 296
Query 392 ---VQVRSLSDYDDALGVDIDG 410
V+ L+ YD ++++
Sbjct 297 AIEVEQADLNIYDRLTELEVES 318
>gi|15610773|ref|NP_218154.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|31794807|ref|NP_857300.1| putative transposase [Mycobacterium bovis AF2122/97]
gi|121639550|ref|YP_979774.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
46 more sequence titles
Length=166
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/162 (64%), Positives = 117/162 (73%), Gaps = 0/162 (0%)
Query 246 LPGRVFASPADFNAQLGAWLALVNTRTRRALGCAPTDRIGADRAAMLSLPPVAPATGWCT 305
+PGRVFASPADFN QL AWL N R R LGC P DRI AD AAML+LPPV P+ GW T
Sbjct 1 MPGRVFASPADFNTQLQAWLVRANHRQHRVLGCRPADRIEADTAAMLTLPPVGPSIGWRT 60
Query 306 SLRLPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQTVS 365
S RLPRDHYVR D NDYSVHP IG R+ + ADL RV V+C G LVADH+RIWA HQT+S
Sbjct 61 STRLPRDHYVRLDGNDYSVHPVAIGRRIEITADLSRVRVWCGGTLVADHDRIWAKHQTIS 120
Query 366 DPAHVEAAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVD 407
DP HV AAK+LRR+ F P +V+ R L+ YD LG+D
Sbjct 121 DPEHVVAAKLLRRKRFDIVGPPHHVEVEQRLLTTYDTVLGLD 162
>gi|5912497|emb|CAB56167.1| putative transposase A [Mycobacterium bovis]
Length=102
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)
Query 312 DHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQTVSDPAHVE 371
DHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQTVSDPAHVE
Sbjct 1 DHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFCDGELVADHERIWAVHQTVSDPAHVE 60
Query 372 AAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA 413
AAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA
Sbjct 61 AAKVLRRRHFSAASPVVEPQVQVRSLSDYDDALGVDIDGGVA 102
>gi|33867201|ref|NP_898759.1| IS sequence [Rhodococcus erythropolis]
gi|33669035|gb|AAP74029.1| IS sequence [Rhodococcus erythropolis]
Length=253
Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 110/225 (49%), Positives = 141/225 (63%), Gaps = 8/225 (3%)
Query 4 VEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVEPRI 63
+EDWA IR L+ +E L + IA LGI+++TV +AL S PKY+R S + AVEP+I
Sbjct 1 MEDWALIRHLYHSEKLSKRAIATKLGIARDTVTNALTSEGPPKYQRPSVDSAISAVEPKI 60
Query 64 RELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQCDF 123
R LL +PTMPATVIAERIGW SI L RV +RP Y P DPA R + G++ QCD
Sbjct 61 RALLTQHPTMPATVIAERIGWGGSISWLRERVRAIRPEYAPADPADRLQHDPGQVVQCDL 120
Query 124 WFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAGWWRLI-EALGA 182
WFPP +P+G Q+ PVL MV A+SR++ A +LPSR DL AG W+L+ + LGA
Sbjct 121 WFPPASIPLGGDQSGAP---PVLVMVAAFSRFITATMLPSRVTTDLVAGMWQLLSQDLGA 177
Query 183 VPRVLVWDGEGAIGRWRGGRSELTTECQAFRGTLAAKVLICRPAD 227
+P L WD E IGR R LT AF GT+A ++ +P D
Sbjct 178 IPHRLWWDNESGIGR----RGRLTEPVTAFVGTVATTLIQLKPYD 218
>gi|291009897|ref|ZP_06567870.1| IS21 family transposase [Saccharopolyspora erythraea NRRL 2338]
Length=177
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/151 (61%), Positives = 114/151 (76%), Gaps = 3/151 (1%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
M++VEDWAEIRRLHR EG+PI+ IAR LG+ +NTV+ AL + P+Y R +GSIVDAVE
Sbjct 1 MISVEDWAEIRRLHRCEGMPIRAIARRLGVGRNTVRRALSAEGPPRYRRPAKGSIVDAVE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
P++R LL +PTMP VIAERIGW+R + VL RV ELRP++LPPDP SRT Y GE+AQ
Sbjct 61 PQVRALLAEWPTMPVPVIAERIGWQRGMTVLKDRVRELRPLFLPPDPVSRTVYQPGELAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCA 151
CD WFPP ++P+GFGQ + PVL MV
Sbjct 121 CDLWFPPADIPLGFGQV---GRPPVLVMVSG 148
>gi|77454772|ref|YP_345640.1| putative transposase [Rhodococcus erythropolis PR4]
gi|77019772|dbj|BAE46148.1| putative transposase [Rhodococcus erythropolis PR4]
Length=172
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/172 (55%), Positives = 118/172 (69%), Gaps = 3/172 (1%)
Query 1 MLTVEDWAEIRRLHRAEGLPIKMIARVLGISKNTVKSALESNQQPKYERAPQGSIVDAVE 60
M++VEDWAEIRRLHRAE L I IAR LG+++NTV+S L S++ PKY R Q ++ DAVE
Sbjct 1 MISVEDWAEIRRLHRAESLSISEIARRLGVTRNTVRSPLASDRPPKYHRKRQRTLADAVE 60
Query 61 PRIRELLQAYPTMPATVIAERIGWERSIRVLSARVAELRPVYLPPDPASRTTYVAGEIAQ 120
P++R LL +P MPATVIAERIGW+ SI + R+ E+RP Y+ DP R Y G IAQ
Sbjct 61 PQVRALLSEFPRMPATVIAERIGWQHSITTIKGRIREIRPEYVGVDPVDRFVYKPGAIAQ 120
Query 121 CDFWFPPIELPVGFGQTRTAKQLPVLTMVCAYSRWLLAMLLPSRCAEDLFAG 172
CD WFP +PVG GQ R LPVL M YSR++ A+++PSR D G
Sbjct 121 CDLWFPETVVPVGGGQERV---LPVLVMTSEYSRFISAVMIPSRQGGDSCLG 169
>gi|145221179|ref|YP_001131857.1| integrase catalytic subunit [Mycobacterium gilvum PYR-GCK]
gi|145213665|gb|ABP43069.1| integrase, catalytic region [Mycobacterium gilvum PYR-GCK]
Length=145
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/140 (66%), Positives = 105/140 (75%), Gaps = 4/140 (2%)
Query 276 LGCAPTDRIGADRAAMLSLPPVAPATGWCTSLRLPRDHYVRCDSNDYSVHPGVIGHRVLV 335
LGCAPTDRIGAD AAML+LPPV P GW S RL RDHYVR DSNDYSVHPGVIG R+ V
Sbjct 2 LGCAPTDRIGADLAAMLALPPVPPQVGWRNSTRLARDHYVRLDSNDYSVHPGVIGRRIEV 61
Query 336 RADLERVHVFCDGELVADHERIWAVHQTVSDPAHVEAAKVLRRRHFSAASPVVEPQVQV- 394
ADL+RV VFC+G+ VA+HER+WA HQT++DP H EAA +LRR SA PV + QV
Sbjct 62 VADLDRVQVFCEGKTVAEHERVWAWHQTITDPEHREAANMLRRNRISALRPVTDSDQQVL 121
Query 395 ---RSLSDYDDALGVDIDGG 411
R LSDYD ALG+D+ G
Sbjct 122 VEQRRLSDYDAALGIDLGEG 141
Lambda K H
0.323 0.137 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 828519148872
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40