BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2949c
Length=199
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610086|ref|NP_217465.1| hypothetical protein Rv2949c [Mycob... 407 4e-112
gi|15842497|ref|NP_337534.1| hypothetical protein MT3022 [Mycoba... 407 6e-112
gi|289448616|ref|ZP_06438360.1| chorismate-pyruvate lyase [Mycob... 404 3e-111
gi|240171785|ref|ZP_04750444.1| hypothetical protein MkanA1_2089... 256 1e-66
gi|15826964|ref|NP_301227.1| hypothetical protein ML0133 [Mycoba... 250 8e-65
gi|183981773|ref|YP_001850064.1| chorismate pyruvate-lyase [Myco... 229 1e-58
gi|118617581|ref|YP_905913.1| chorismate pyruvate-lyase [Mycobac... 229 2e-58
gi|240170194|ref|ZP_04748853.1| hypothetical protein MkanA1_1283... 192 3e-47
gi|183980135|ref|YP_001848426.1| 4-hydroxybenzoate synthetase (c... 171 5e-41
gi|254410991|ref|ZP_05024769.1| conserved hypothetical protein [... 75.5 5e-12
gi|254430069|ref|ZP_05043776.1| conserved hypothetical protein [... 75.1 5e-12
gi|307151077|ref|YP_003886461.1| hypothetical protein Cyan7822_1... 74.3 8e-12
gi|332710858|ref|ZP_08430795.1| 4-hydroxybenzoate synthetase, ch... 70.5 1e-10
gi|153871071|ref|ZP_02000334.1| conserved hypothetical protein [... 67.8 1e-09
gi|332710044|ref|ZP_08429999.1| 4-hydroxybenzoate synthetase, ch... 64.7 7e-09
gi|159900470|ref|YP_001546717.1| hypothetical protein Haur_3957 ... 63.5 2e-08
gi|88602437|ref|YP_502615.1| GHMP kinase group 1 [Methanospirill... 63.2 2e-08
gi|344343229|ref|ZP_08774098.1| protein of unknown function DUF9... 60.5 1e-07
gi|256424277|ref|YP_003124930.1| hypothetical protein Cpin_5298 ... 57.8 1e-06
gi|326797310|ref|YP_004315130.1| hypothetical protein Marme_4094... 57.8 1e-06
gi|343917633|gb|EGV28425.1| protein of unknown function DUF98 [T... 55.8 3e-06
gi|90022929|ref|YP_528756.1| hypothetical protein Sde_3289 [Sacc... 55.8 4e-06
gi|329755804|gb|AEC04355.1| putative chorismate lyase [Chitinoph... 55.5 5e-06
gi|307354651|ref|YP_003895702.1| beta-ribofuranosylaminobenzene ... 55.1 6e-06
gi|37520513|ref|NP_923890.1| hypothetical protein glr0944 [Gloeo... 53.9 1e-05
gi|333986803|ref|YP_004519410.1| hypothetical protein MSWAN_0571... 53.5 2e-05
gi|116754245|ref|YP_843363.1| beta-ribofuranosylaminobenzene 5'-... 52.8 3e-05
gi|268326227|emb|CBH39815.1| conserved hypothetical protein, DUF... 52.4 3e-05
gi|344338630|ref|ZP_08769561.1| protein of unknown function DUF9... 51.6 6e-05
gi|28170715|emb|CAD62201.1| Ata7 protein [Saccharothrix mutabili... 50.8 1e-04
gi|336122292|ref|YP_004577067.1| hypothetical protein Metok_1323... 49.3 3e-04
gi|83648798|ref|YP_437233.1| 4-hydroxybenzoate synthetase [Hahel... 48.5 5e-04
gi|288942663|ref|YP_003444903.1| hypothetical protein Alvin_2970... 48.1 8e-04
gi|288559641|ref|YP_003423127.1| hypothetical protein mru_0383 [... 47.4 0.001
gi|159904740|ref|YP_001548402.1| hypothetical protein MmarC6_034... 47.0 0.002
gi|119390675|pdb|2NWI|A Chain A, Crystal Structure Of Protein Af... 46.2 0.003
gi|11498992|ref|NP_070225.1| hypothetical protein AF1396 [Archae... 45.8 0.003
gi|288869591|ref|ZP_06409471.1| putative UbiC transcription regu... 45.8 0.003
gi|222445721|ref|ZP_03608236.1| hypothetical protein METSMIALI_0... 45.8 0.004
gi|148642784|ref|YP_001273297.1| 4-hydroxybenzoate synthetase (c... 45.8 0.004
gi|327401894|ref|YP_004342733.1| hypothetical protein Arcve_2026... 44.7 0.008
gi|150403477|ref|YP_001330771.1| hypothetical protein MmarC7_156... 44.3 0.011
gi|91773241|ref|YP_565933.1| hypothetical protein Mbur_1262 [Met... 43.5 0.015
gi|312137187|ref|YP_004004524.1| hypothetical protein Mfer_0966 ... 43.1 0.021
gi|134046096|ref|YP_001097582.1| hypothetical protein MmarC5_106... 42.7 0.031
gi|325959794|ref|YP_004291260.1| hypothetical protein Metbo_2069... 41.2 0.092
gi|171057941|ref|YP_001790290.1| hypothetical protein Lcho_1256 ... 40.8 0.10
gi|336477480|ref|YP_004616621.1| hypothetical protein Mzhil_1564... 40.8 0.13
gi|254788336|ref|YP_003075765.1| 4-hydroxybenzoate synthetase [T... 40.4 0.13
gi|15668993|ref|NP_247797.1| hypothetical protein MJ_0807 [Metha... 40.4 0.15
>gi|15610086|ref|NP_217465.1| hypothetical protein Rv2949c [Mycobacterium tuberculosis H37Rv]
gi|31794125|ref|NP_856618.1| hypothetical protein Mb2973c [Mycobacterium bovis AF2122/97]
gi|121638830|ref|YP_979054.1| hypothetical protein BCG_2970c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
76 more sequence titles
Length=199
Score = 407 bits (1047), Expect = 4e-112, Method: Compositional matrix adjust.
Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%)
Query 1 MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE 60
MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE
Sbjct 1 MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE 60
Query 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS
Sbjct 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
Query 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD
Sbjct 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
Query 181 APHEEPDRWQFSNAITLAR 199
APHEEPDRWQFSNAITLAR
Sbjct 181 APHEEPDRWQFSNAITLAR 199
>gi|15842497|ref|NP_337534.1| hypothetical protein MT3022 [Mycobacterium tuberculosis CDC1551]
gi|13882805|gb|AAK47348.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=212
Score = 407 bits (1045), Expect = 6e-112, Method: Compositional matrix adjust.
Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%)
Query 1 MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE 60
MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE
Sbjct 14 MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE 73
Query 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS
Sbjct 74 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 133
Query 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD
Sbjct 134 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 193
Query 181 APHEEPDRWQFSNAITLAR 199
APHEEPDRWQFSNAITLAR
Sbjct 194 APHEEPDRWQFSNAITLAR 212
>gi|289448616|ref|ZP_06438360.1| chorismate-pyruvate lyase [Mycobacterium tuberculosis CPHL_A]
gi|289421574|gb|EFD18775.1| chorismate-pyruvate lyase [Mycobacterium tuberculosis CPHL_A]
Length=199
Score = 404 bits (1038), Expect = 3e-111, Method: Compositional matrix adjust.
Identities = 198/199 (99%), Positives = 198/199 (99%), Gaps = 0/199 (0%)
Query 1 MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE 60
MTECFLSDQEIRKLNRDLRILIAANGTLTR LNIVADDEVIVQIVKQRIHDVSPKLSEFE
Sbjct 1 MTECFLSDQEIRKLNRDLRILIAANGTLTRGLNIVADDEVIVQIVKQRIHDVSPKLSEFE 60
Query 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS
Sbjct 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
Query 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD
Sbjct 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
Query 181 APHEEPDRWQFSNAITLAR 199
APHEEPDRWQFSNAITLAR
Sbjct 181 APHEEPDRWQFSNAITLAR 199
>gi|240171785|ref|ZP_04750444.1| hypothetical protein MkanA1_20895 [Mycobacterium kansasii ATCC
12478]
Length=196
Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/199 (68%), Positives = 164/199 (83%), Gaps = 3/199 (1%)
Query 1 MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE 60
MT+C LS++EIR L+RDLRILIA NGTLTR+LN+VA++E++VQIV Q I PK+ E
Sbjct 1 MTDCTLSEEEIRNLDRDLRILIATNGTLTRILNVVANEEIVVQIVNQHIRRAVPKMVE-- 58
Query 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
LGQ RVLQR I+LKGRNS ++FVAAESL+AID LPA I+ RLT+T+ P+GEVMAAS
Sbjct 59 -LGQSAESRVLQRNILLKGRNSGNVFVAAESLVAIDLLPAEIVARLTRTDHPIGEVMAAS 117
Query 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
+IETFKE AKVWVG P WLAL GYQ+SR+R VARRYR++SGGQPIM++TE+FLR+VF+D
Sbjct 118 YIETFKESAKVWVGASPRWLALDGYQHSRRRTVARRYRILSGGQPIMLITEYFLRTVFQD 177
Query 181 APHEEPDRWQFSNAITLAR 199
PHEE D QFSN IT AR
Sbjct 178 VPHEEADCRQFSNVITAAR 196
>gi|15826964|ref|NP_301227.1| hypothetical protein ML0133 [Mycobacterium leprae TN]
gi|221229442|ref|YP_002502858.1| hypothetical protein MLBr_00133 [Mycobacterium leprae Br4923]
gi|81537264|sp|Q9CD83.1|PHBS_MYCLE RecName: Full=Chorismate--pyruvate lyase; AltName: Full=4-HB
synthase; AltName: Full=p-hydroxybenzoic acid synthase
gi|13092511|emb|CAC29641.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932549|emb|CAR70226.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=210
Score = 250 bits (639), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/195 (63%), Positives = 157/195 (81%), Gaps = 3/195 (1%)
Query 1 MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE 60
MT LS +EIRKL+RDLRIL+A NGTLTRVLN+VA++E++V I+ Q++ DV+PK+ E E
Sbjct 1 MTNRTLSREEIRKLDRDLRILVATNGTLTRVLNVVANEEIVVDIINQQLLDVAPKIPELE 60
Query 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
L +GR+LQR I+LKG+ S LFVAAESLI ID LP AI T LT+T+ P+GE+MAAS
Sbjct 61 NLK---IGRILQRDILLKGQKSGILFVAAESLIVIDLLPTAITTYLTKTHHPIGEIMAAS 117
Query 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
IET+KE+A+VW+GDLP WLA +GY + KRAV RRYR+I+GGQP+++ TE+FLRSVF+D
Sbjct 118 RIETYKEDAQVWIGDLPCWLADYGYWDLPKRAVGRRYRIIAGGQPVIITTEYFLRSVFQD 177
Query 181 APHEEPDRWQFSNAI 195
P EE DR Q+SN I
Sbjct 178 TPREELDRCQYSNDI 192
>gi|183981773|ref|YP_001850064.1| chorismate pyruvate-lyase [Mycobacterium marinum M]
gi|183175099|gb|ACC40209.1| chorismate pyruvate-lyase [Mycobacterium marinum M]
Length=212
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/192 (60%), Positives = 145/192 (76%), Gaps = 3/192 (1%)
Query 1 MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE 60
MTEC LSD++IRKLNRDLRILIA NGTLTR+LN++A+DE++V+IVKQ+I D +P E +
Sbjct 11 MTECHLSDEDIRKLNRDLRILIATNGTLTRILNVLANDEIVVEIVKQQIQDAAP---EMD 67
Query 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
+GRVL+R I+LKGR S FVAAES IAID LP I+ L +T+ P+GEVMAAS
Sbjct 68 GCDHSSIGRVLRRDIVLKGRRSGIPFVAAESFIAIDLLPPEIVASLLETHRPIGEVMAAS 127
Query 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
IETFKEEAKVW G+ P WLAL +N + V R+YRVI+ G+P++++TE+FLRSVF D
Sbjct 128 CIETFKEEAKVWAGESPAWLALDRRRNLPPKVVGRQYRVIAEGRPVIIITEYFLRSVFED 187
Query 181 APHEEPDRWQFS 192
EEP R Q S
Sbjct 188 NSREEPIRHQRS 199
>gi|118617581|ref|YP_905913.1| chorismate pyruvate-lyase [Mycobacterium ulcerans Agy99]
gi|118569691|gb|ABL04442.1| chorismate pyruvate-lyase [Mycobacterium ulcerans Agy99]
Length=212
Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/192 (60%), Positives = 144/192 (75%), Gaps = 3/192 (1%)
Query 1 MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE 60
MTEC LSD+EIRKLNRDLRILIA NGTLTR+LN++A+DE++V+IVKQ+I D +P E +
Sbjct 11 MTECHLSDEEIRKLNRDLRILIATNGTLTRILNVLANDEIVVEIVKQQIQDAAP---EMD 67
Query 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
+GRVL+R I+LKGR S FVAAES IAID LP I+ L +T+ P+GEVMAAS
Sbjct 68 GCDHSSIGRVLRRDIVLKGRRSGIPFVAAESFIAIDLLPPEIVASLLETHRPIGEVMAAS 127
Query 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
IETFKEEAKVW G+ P WL L +N + V R+YRVI+ G+P++++TE+FLRSVF D
Sbjct 128 CIETFKEEAKVWAGESPAWLELDRRRNLPPKVVGRQYRVIAEGRPVIIITEYFLRSVFED 187
Query 181 APHEEPDRWQFS 192
EEP R Q S
Sbjct 188 NSREEPIRHQRS 199
>gi|240170194|ref|ZP_04748853.1| hypothetical protein MkanA1_12838 [Mycobacterium kansasii ATCC
12478]
Length=185
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/179 (52%), Positives = 131/179 (74%), Gaps = 3/179 (1%)
Query 1 MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE 60
MT LSD +IR+L+RDL+IL+A NGTLTR+L I+ADDE++V+I+ Q+IH +P++ + E
Sbjct 1 MTRTMLSDIDIRELDRDLQILLATNGTLTRILKIIADDEIVVEIINQQIHPTAPEIPDLE 60
Query 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
+L R+LQR ILKG +S F+AAE+LIA+D LP AI+ +LT+T+ P+GE+M AS
Sbjct 61 RLPD---SRILQRQTILKGLSSGEEFIAAEALIAMDLLPTAILRKLTETDHPIGELMVAS 117
Query 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFR 179
+E FKE A++W G+LP WL + S A+ARRY +I GQ ++V+TEHFL +FR
Sbjct 118 CLEVFKETAEIWEGELPDWLVSTSERKSPAHAIARRYHMIVDGQSVIVLTEHFLPGIFR 176
>gi|183980135|ref|YP_001848426.1| 4-hydroxybenzoate synthetase (chorismate lyase) [Mycobacterium
marinum M]
gi|183173461|gb|ACC38571.1| 4-hydroxybenzoate synthetase (chorismate lyase) [Mycobacterium
marinum M]
Length=199
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/178 (48%), Positives = 120/178 (68%), Gaps = 3/178 (1%)
Query 1 MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE 60
M +LSD+EI+ LNRDLRIL+ NGTLTR+LNIV DE++++ + Q I +P +
Sbjct 1 MNRRYLSDEEIQGLNRDLRILVTTNGTLTRILNIVTADEIVIENIDQEILPDAPTPPDRA 60
Query 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
QL + G L R ++LKGR+S FVAAE+ I +DR+P +I L T+ P+GE++ AS
Sbjct 61 QLPK---GGTLLRNVVLKGRHSGSSFVAAETSIVVDRVPPELIESLMNTDRPIGELLVAS 117
Query 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
IE FKE +VW+G+LP W+ Y S+ +A+ARRY +I GQP +V+TEHFL +F
Sbjct 118 RIEFFKEAPEVWIGELPEWIVAPEYGISQHQALARRYTIIISGQPAIVITEHFLPEIF 175
>gi|254410991|ref|ZP_05024769.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196182346|gb|EDX77332.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length=193
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/163 (32%), Positives = 82/163 (51%), Gaps = 10/163 (6%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILK 78
RIL+ +GTLT +L +++ V + Q + + L E V V+ R I+L+
Sbjct 34 RILLTTDGTLTDILEAYLFEQIQVVKISQNLIPIPKSLPIMEL---VEGTDVIDRRILLQ 90
Query 79 GRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKE---EAKVWVGD 135
GR S ++ AES++ +RL L +T P+G++ +ETFKE AK D
Sbjct 91 GRISRKNYIYAESILVPERLDDNFRHELFKTKTPIGKIWLEQKVETFKEILDSAKEPAQD 150
Query 136 LPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
L + + N ++R YRV + G+P+M++TE F S F
Sbjct 151 LAKYFTIEPSDN----LLSRTYRVFTNGKPVMMITEKFPESYF 189
>gi|254430069|ref|ZP_05043776.1| conserved hypothetical protein [Alcanivorax sp. DG881]
gi|196196238|gb|EDX91197.1| conserved hypothetical protein [Alcanivorax sp. DG881]
Length=216
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/174 (31%), Positives = 94/174 (55%), Gaps = 13/174 (7%)
Query 12 RKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRI---HDVSPKLSEFEQLGQVGVG 68
KL+ +IL+ +GT+T +L ++ + ++++ + Q I HD P S + Q G
Sbjct 47 NKLSHLQKILLMTDGTVTELLEHLSREPIVIEKLYQAIINNHDEVPA-SHAHGVYQ-NEG 104
Query 69 RVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKE- 127
VL R IILKG++++ ++ AES I IDRLP L + P+G++ + +ET+K
Sbjct 105 PVLIRKIILKGKHTDKNYIYAESTILIDRLPECFRNELIDSKTPIGKLWSKHKLETYKTD 164
Query 128 ---EAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
E++ ++ G+L++ ++R Y V S G+ M++TE F S+F
Sbjct 165 FSAESENSNVEISGYLSV----PVDSELLSRTYSVYSCGEKSMIITEKFSSSLF 214
>gi|307151077|ref|YP_003886461.1| hypothetical protein Cyan7822_1179 [Cyanothece sp. PCC 7822]
gi|306981305|gb|ADN13186.1| protein of unknown function DUF98 [Cyanothece sp. PCC 7822]
Length=195
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/165 (33%), Positives = 91/165 (56%), Gaps = 10/165 (6%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVG-RVLQRYIIL 77
RI++ +GTLT +L +++ Q+VK ++ E + L + +G ++ R ++L
Sbjct 37 RIILTTDGTLTEILEAYLYEKI--QLVKLS-QEIVASAQEIKALD-LNIGTNIMNRKVLL 92
Query 78 KGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKE--EAKVWVGD 135
+G+ S ++ AES+I RL RL ++ +P+G + +ETFKE ++K +
Sbjct 93 QGKISRRNWIYAESVIVPARLDEIYRERLLKSQEPIGRLWLEHRVETFKEIIDSK---RE 149
Query 136 LPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
L G L+ + S + ++R YRV S GQPIM++TE F S F D
Sbjct 150 LAGELSDYFLIKSEDKLLSRTYRVFSKGQPIMMITEKFPESYFID 194
>gi|332710858|ref|ZP_08430795.1| 4-hydroxybenzoate synthetase, chorismate lyase [Lyngbya majuscula
3L]
gi|332350411|gb|EGJ30014.1| 4-hydroxybenzoate synthetase, chorismate lyase [Lyngbya majuscula
3L]
Length=194
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/164 (29%), Positives = 83/164 (51%), Gaps = 10/164 (6%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILK 78
RIL+ NGT+T ++ + + + + K+ D + + V+ R ++L+
Sbjct 35 RILLTTNGTVTDMIEAYSGEAIKI---KKLFEDQITITEDILPMNLKKGTEVIARKVLLQ 91
Query 79 GRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEE---AKVWVGD 135
G+ S+ +V A+S++ +DRL + T+L QT P+G++ + +E FKE K GD
Sbjct 92 GKMSDRNYVYADSILVLDRLNEKMRTQLLQTKTPIGKLWVENKVEIFKENVELGKEHAGD 151
Query 136 LPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFR 179
L + + +N + R Y VIS Q M++TE F + FR
Sbjct 152 LADYFQIEPEEN----LLYRTYCVISNHQYTMMITEKFPENNFR 191
>gi|153871071|ref|ZP_02000334.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152072463|gb|EDN69666.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length=189
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/161 (27%), Positives = 87/161 (55%), Gaps = 6/161 (3%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVG-RVLQRYIIL 77
+IL+ A+GTLT +L + ++ + V + + + + + E + VG V++R I+L
Sbjct 33 KILLIADGTLTNILEVFLNEPIGVVKLSEEVVSIPADIPPLE----IKVGTEVMERQILL 88
Query 78 KGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLP 137
G+ S+ ++ A+S+I ++R+ +L +++ P+G++ ETFK E + +
Sbjct 89 CGKTSQRNWLYADSIIVLERVEDKFREKLIKSHTPIGKLWREHKTETFK-EIVTYALEPA 147
Query 138 GWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
G L+ + ++R YRV S +P+M++TE F + F
Sbjct 148 GGLSDFFDIKREDKLLSRTYRVFSNRKPVMMITEKFPDNYF 188
>gi|332710044|ref|ZP_08429999.1| 4-hydroxybenzoate synthetase, chorismate lyase [Lyngbya majuscula
3L]
gi|332351187|gb|EGJ30772.1| 4-hydroxybenzoate synthetase, chorismate lyase [Lyngbya majuscula
3L]
Length=183
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/162 (31%), Positives = 80/162 (50%), Gaps = 8/162 (4%)
Query 19 RILIAANGTLTRVLNIVADDEV-IVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIIL 77
RIL+ +GT+T +L +++ +V++ ++ + + E + VL R I+L
Sbjct 24 RILLTTDGTVTDMLEAYLFEQIRLVKLSEELVTTTD----DIEPMELDKGSSVLDRKILL 79
Query 78 KGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLP 137
+G+ S ++ AES+I IDRL L +T P+G++ ETFKE V G P
Sbjct 80 QGKISRKNYIYAESIIVIDRLDDYFQKDLLKTKTPIGKIWREQRFETFKE--IVDTGKKP 137
Query 138 G-WLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
LA + + R Y V S Q +M+++EHF S F
Sbjct 138 ANQLADYFQIEPEANLLFRTYCVFSNRQSVMMISEHFPESYF 179
>gi|159900470|ref|YP_001546717.1| hypothetical protein Haur_3957 [Herpetosiphon aurantiacus DSM
785]
gi|159893509|gb|ABX06589.1| protein of unknown function DUF98 [Herpetosiphon aurantiacus
DSM 785]
Length=178
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/162 (33%), Positives = 80/162 (50%), Gaps = 15/162 (9%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGV---GRVLQRYI 75
RIL+ +GT+T +L + + ++K +S K+S + + V VL+R I
Sbjct 19 RILLITDGTVTEILQAYYREPI--NLIK-----LSEKISTNRDIDLLDVRAGEEVLERQI 71
Query 76 ILKGRNSEHLFVAAESLIAI----DRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKV 131
+L+GR+S ++ AESLIAI D L A++ L +N PLG + +ETFKE
Sbjct 72 LLQGRDSGRTYIYAESLIAIEKFDDELRASMRDTLLNSNLPLGRLWLDHRLETFKEMVSQ 131
Query 132 WVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHF 173
++ N V R YRV S + IM++TE F
Sbjct 132 RQEKAHNLCSIFDISNDH-HVVLRTYRVFSRKKKIMLITEMF 172
>gi|88602437|ref|YP_502615.1| GHMP kinase group 1 [Methanospirillum hungatei JF-1]
gi|88187899|gb|ABD40896.1| beta-ribofuranosylaminobenzene 5'-phosphate synthase [Methanospirillum
hungatei JF-1]
Length=519
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (28%), Positives = 84/170 (50%), Gaps = 10/170 (5%)
Query 14 LNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQL--GQVGVGRVL 71
L + R L+ +G++TR+L + V V+ ++Q I S K++E+ ++ G+ V
Sbjct 20 LTKPERALLITDGSVTRLLEAFINAPVGVKTIQQNIVPASEKIAEYLEILPGE----DVN 75
Query 72 QRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKV 131
R + L +N++ L + A S + LP +TRL ++P+G +M +E+ +E +
Sbjct 76 FREVYLYNKNNDRLLIRAISYAPLKHLPPGAMTRLMNEDEPIGFIMRDEKMESRREILSI 135
Query 132 WVGDLPGWLALHGYQNSRK-RAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
LP + N R ++R YR+I +PI + E S+F D
Sbjct 136 QKKLLPSECQI---PNKRTCHCLSRSYRIIHNSRPIFYIEEQIPSSLFID 182
>gi|344343229|ref|ZP_08774098.1| protein of unknown function DUF98 [Marichromatium purpuratum
984]
gi|343805160|gb|EGV23057.1| protein of unknown function DUF98 [Marichromatium purpuratum
984]
Length=193
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/163 (30%), Positives = 80/163 (50%), Gaps = 15/163 (9%)
Query 18 LRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVG-RVLQRYII 76
LR L+ +GT+T++L + V V V+QR + + E VG G R L R
Sbjct 45 LRALLVTDGTVTKILEAYFWEPVTVDTVEQRFEHATATVPWIE----VGEGDRCLLRDAR 100
Query 77 LKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDL 136
L+G +S F A SLI D +PA RL +G ++ S +E+++E V + +
Sbjct 101 LRGDDSGRSFAEAFSLIRTDLIPADFRKRLIDREIGIGVLIRDSGLESYREVLDVGLIE- 159
Query 137 PGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFR 179
++ AV R YR+I P++++TE+F +++R
Sbjct 160 ---------DDAEPSAVYRTYRIIIERHPVILITEYFPLALYR 193
>gi|256424277|ref|YP_003124930.1| hypothetical protein Cpin_5298 [Chitinophaga pinensis DSM 2588]
gi|256039185|gb|ACU62729.1| protein of unknown function DUF98 [Chitinophaga pinensis DSM
2588]
Length=223
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (28%), Positives = 84/161 (53%), Gaps = 7/161 (4%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILK 78
+IL+ +GT+T ++++ ++ + V I+ Q I V + Q G+ + +L+R ++LK
Sbjct 70 KILLTTDGTVTDLISLYKNESIKVDIIDQEI--VFADAPAYLQCGREAL--LLKRIVLLK 125
Query 79 GRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLPG 138
G + H++ AES+ I+RL I RL +TN P+G + +E+ +E ++
Sbjct 126 GPSGNHVY--AESIFVIERLSETIRERLLETNLPIGLLWKEERLESHREILTYYIEREDK 183
Query 139 WLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFR 179
AL G Q + ++R Y + + + +TE F + FR
Sbjct 184 VSALLG-QPAGSDLLSRTYLIHNKQSVLGAITEKFPLTSFR 223
>gi|326797310|ref|YP_004315130.1| hypothetical protein Marme_4094 [Marinomonas mediterranea MMB-1]
gi|326548074|gb|ADZ93294.1| hypothetical protein Marme_4094 [Marinomonas mediterranea MMB-1]
Length=209
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/170 (27%), Positives = 80/170 (48%), Gaps = 8/170 (4%)
Query 19 RILIAANGTLTRVL-NIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYII- 76
R+++ ++GTLT+++ N+V + + ++ + D + S +Q R LQ+ I+
Sbjct 31 RLILESDGTLTQLVGNLVGESIIAEKLFEGPTPDSRSQTSSLQQ-----DERYLQKRIVS 85
Query 77 LKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDL 136
LKG+ S ++ A S++ D L L + +G +ET+KE W +
Sbjct 86 LKGQKSGFCYLYANSIVYHDNLNVNFSRALLDSKITIGRAWERYRVETYKE-LDAWGFES 144
Query 137 PGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRDAPHEEP 186
G L H +S + R Y V SGG+ I ++TE F + F+ P
Sbjct 145 AGTLGRHFNLSSEALLLFRTYSVYSGGKKIFLITEKFPMAWFQKPNQTYP 194
>gi|343917633|gb|EGV28425.1| protein of unknown function DUF98 [Thiorhodococcus drewsii AZ1]
Length=193
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/163 (28%), Positives = 80/163 (50%), Gaps = 15/163 (9%)
Query 18 LRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE-QLGQVGVGRVLQRYII 76
LR L+ +GT+T+ L + V V ++QR S + + Q G + L R
Sbjct 45 LRALLVTDGTVTKTLEAYFWESVAVDTLEQRFEVASESVPWIQVQTGDL----CLVRDAR 100
Query 77 LKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDL 136
L+G +++ +V A SLI ID +P RL +G ++ S +E+++E + +
Sbjct 101 LRGTSTDRNYVEAFSLIRIDLIPPGFRQRLIDREIGIGVLIRDSGLESYREVLDIGLDRT 160
Query 137 PGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFR 179
A AV R YR+I G+P++++TE+F +++R
Sbjct 161 AEGAA----------AVFRTYRIIIDGRPVILITEYFPLTLYR 193
>gi|90022929|ref|YP_528756.1| hypothetical protein Sde_3289 [Saccharophagus degradans 2-40]
gi|89952529|gb|ABD82544.1| protein of unknown function DUF98 [Saccharophagus degradans 2-40]
Length=183
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/161 (28%), Positives = 77/161 (48%), Gaps = 9/161 (5%)
Query 18 LRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIIL 77
LR+L+ +GT+T+ L + V V+ + Q ++ E + + +V QR + L
Sbjct 31 LRVLLTTDGTVTKSLESYFWEPVKVETLAQGWITLAEDKPE---IARTTGDKVWQRQVRL 87
Query 78 KGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLP 137
G+ S+ + A+S I D+LP I L +GE++ +ET+++ VG P
Sbjct 88 VGQKSKTEYAQAQSHICADQLPVHIREALEAGKVGIGELLRECGLETYRQ--ITCVGSTP 145
Query 138 GWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
G ++ V R YR++ G QP + + E F SV+
Sbjct 146 D----DGSASAAAGTVWRSYRIVMGHQPFIQIREEFPVSVY 182
>gi|329755804|gb|AEC04355.1| putative chorismate lyase [Chitinophaga sancti]
Length=223
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/161 (28%), Positives = 83/161 (52%), Gaps = 7/161 (4%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILK 78
+IL+ +GT+T ++++ + + V I+ Q I V + Q G+ + +L+R ++LK
Sbjct 70 KILLTTDGTVTDLISLYKGEAIKVDIIDQEI--VFADAPTYLQCGKEAL--LLKRIVLLK 125
Query 79 GRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLPG 138
G + H++ AES+ I+RL I RL +TN P+G + +E+ +E ++
Sbjct 126 GPSGSHVY--AESIFVIERLSERIRERLLETNLPIGLLWKEERLESHREILTYYIEREEK 183
Query 139 WLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFR 179
AL G Q + ++R Y + + + +TE F + FR
Sbjct 184 VSALLG-QPAGSDLLSRTYLIHNRQSVLGAITEKFPLTSFR 223
>gi|307354651|ref|YP_003895702.1| beta-ribofuranosylaminobenzene 5'-phosphate synthase family protein
[Methanoplanus petrolearius DSM 11571]
gi|307157884|gb|ADN37264.1| beta-ribofuranosylaminobenzene 5'-phosphate synthase family [Methanoplanus
petrolearius DSM 11571]
Length=514
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/181 (27%), Positives = 84/181 (47%), Gaps = 18/181 (9%)
Query 8 DQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGV 67
++E+ L+ +IL+ +G++T +L V EV V + Q +V P ++ +
Sbjct 14 EEEVGTLSPMQKILLGTDGSVTTLLENVLGCEVTVHTLSQ---EVVPAGETVAASLEIPL 70
Query 68 GR-VLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFK 126
G V R + L +E + + A S I RL + L + P+G +M HIE+ +
Sbjct 71 GEPVNHRIVTLNEGETEKVLLYAASDSPISRLEPSFKDDLMLADIPIGRIMKMHHIESRR 130
Query 127 E-------EAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFR 179
E A V D+ G + ++RRYR+I+GG+P++ + E F S F
Sbjct 131 ELDDVRVCRAGAGVSDVLGVF-------RHEPLLSRRYRIITGGKPLISIRETFPYSNFT 183
Query 180 D 180
+
Sbjct 184 E 184
>gi|37520513|ref|NP_923890.1| hypothetical protein glr0944 [Gloeobacter violaceus PCC 7421]
gi|35211507|dbj|BAC88885.1| glr0944 [Gloeobacter violaceus PCC 7421]
Length=178
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/160 (29%), Positives = 73/160 (46%), Gaps = 14/160 (8%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILK 78
R+L+ +GT+T +L + + V+ + + LG+ RV +R ++L
Sbjct 32 RLLMVTDGTVTELLAAYFLEPIAVRKLGPLV---------MRDLGE----RVYEREVLLT 78
Query 79 GRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLPG 138
GR S +V A+S I IDRL A + L T+ +GE++ ET++E + W G
Sbjct 79 GRISGQAYVHAQSTILIDRLTADLREGLLATDKGIGELLREELTETYRELSGYWHEAAGG 138
Query 139 WLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
A G + + R Y V P M +TE F + F
Sbjct 139 RAAYFG-TDPEAPLLGRSYVVRCNQIPTMRITERFWAAAF 177
>gi|333986803|ref|YP_004519410.1| hypothetical protein MSWAN_0571 [Methanobacterium sp. SWAN-1]
gi|333824947|gb|AEG17609.1| protein of unknown function DUF98 [Methanobacterium sp. SWAN-1]
Length=177
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/176 (27%), Positives = 82/176 (47%), Gaps = 14/176 (7%)
Query 8 DQEIRKLNRDLRILIAANGTLTRVLNIVADD---EVIVQIVKQRIHDVSPKLSEFEQLGQ 64
+ +I KL+ +IL+ +G++T +L+I+ E +VQ ++ DV+ LS
Sbjct 13 ESDIGKLSSAQKILLTTDGSITAILDILKGHVHIETLVQEFREADSDVAELLS------- 65
Query 65 VGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIET 124
+ G + +IL G + A S I + RL L + + P+G ++ IE+
Sbjct 66 IDKGDNVNYRVILMGPGEP--LMHAVSYIPVKRLDNDFKDDLIKADIPIGRILKKHSIES 123
Query 125 FKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
+E KV+V D+ +H + R Y +I G+ ++ + E F S FRD
Sbjct 124 RREIKKVYVEDMSD--EMHDIFKVNSPMLTRTYNIIHNGEILIWIKETFPYSFFRD 177
>gi|116754245|ref|YP_843363.1| beta-ribofuranosylaminobenzene 5'-phosphate synthase [Methanosaeta
thermophila PT]
gi|116665696|gb|ABK14723.1| beta-ribofuranosylaminobenzene 5'-phosphate synthase family [Methanosaeta
thermophila PT]
Length=509
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/188 (23%), Positives = 89/188 (48%), Gaps = 11/188 (5%)
Query 1 MTECFLSDQEIRKLNRDL-------RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVS 53
MT F QEI KL R + ++L+ +G++T +L ++ V ++ ++QR V
Sbjct 1 MTFAFPVAQEIAKLERIVGRLSPVQKMLLGTDGSVTSLLEVITGSPVGIETLEQR---VV 57
Query 54 PKLSEFEQLGQVGVGR-VLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDP 112
P + + + VG V R + LK + + A S + RL L + + P
Sbjct 58 PATDDVARELDIDVGEDVNYRVVRLKNARTGETLIHAVSYTPLKRLEPGFKNDLMRADIP 117
Query 113 LGEVMAASHIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEH 172
+G+++ IE+ ++ + ++ ++ ++RRY++I G+P++ + E
Sbjct 118 IGQILHKHRIESRRDITQTECEQADDRMSQLFNIFPKELMLSRRYKIIRKGEPLIAIRET 177
Query 173 FLRSVFRD 180
F ++F+D
Sbjct 178 FPYNMFQD 185
>gi|268326227|emb|CBH39815.1| conserved hypothetical protein, DUF98 family [uncultured archaeon]
Length=185
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/160 (29%), Positives = 77/160 (49%), Gaps = 14/160 (8%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGR-VLQRYIIL 77
R+L+ +G++T +L ++ EV ++ +KQ V P SE L V +G V +R II+
Sbjct 31 RVLLGHDGSMTSLLELITGCEVAIRTIKQA---VVPCPSEAADLLAVDIGEPVNEREIII 87
Query 78 KGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLP 137
+ + A S + RL T L + + P+G++M IE +E V
Sbjct 88 VQMTDDLPLLYARSYTPLSRLKPGFKTDLMRADIPIGKIMQRHRIEAMREILDV------ 141
Query 138 GWLA---LHGYQNSRKRA-VARRYRVISGGQPIMVVTEHF 173
G+L L G +R + R Y +I+ G+P++ V E F
Sbjct 142 GYLESNHLLGVLLARPGPYLWRVYNIITHGKPLITVKECF 181
>gi|344338630|ref|ZP_08769561.1| protein of unknown function DUF98 [Thiocapsa marina 5811]
gi|343801212|gb|EGV19155.1| protein of unknown function DUF98 [Thiocapsa marina 5811]
Length=203
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/167 (28%), Positives = 79/167 (48%), Gaps = 15/167 (8%)
Query 18 LRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVG-RVLQRYII 76
LR L+ +GT+T++L + V V ++QR + QV G R L R
Sbjct 49 LRALLVTDGTVTKILEAYFWEPVTVDTLEQRFETAEESVPAI----QVVPGDRCLIRDAR 104
Query 77 LKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDL 136
L+G +S F A SLI + +P+ RL +G ++ S +E+++E V V
Sbjct 105 LRGTDSGRSFAEAFSLIRTELIPSGFRQRLIDREIGIGVLIRDSGLESYREVLDVGV--- 161
Query 137 PGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRDAPH 183
++ G + AV R YR+I +P++++TE F +++ P
Sbjct 162 --EVSTEG-----RLAVCRTYRIIIERRPVILITECFPLALYAGEPD 201
>gi|28170715|emb|CAD62201.1| Ata7 protein [Saccharothrix mutabilis subsp. capreolus]
Length=219
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/182 (27%), Positives = 82/182 (46%), Gaps = 22/182 (12%)
Query 4 CFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHD---VSPKLSEFE 60
LSD ++ L+ R L+ A+GT+ + + V+ + R H V P
Sbjct 41 AHLSDLDVALLSPYYRALLTADGTVRLI-----EAHVLEPVHAHRTHQNRTVLPAGPRHH 95
Query 61 QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS 120
L V+ R + L G + F AESL+ RLPA + R+ + +G + A+
Sbjct 96 WLDCEPGTPVVARGVDLVGARTRRRFARAESLLVPARLPARLAERIDRAPAGIGGALDAA 155
Query 121 HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
H+E +E +W G P + + R YR++ G+P M+++E F+ + +R
Sbjct 156 HVEHHRE--LLWNGKEPDGVPM------------RTYRMMIEGRPAMLISEWFMVAPWRA 201
Query 181 AP 182
AP
Sbjct 202 AP 203
>gi|336122292|ref|YP_004577067.1| hypothetical protein Metok_1323 [Methanothermococcus okinawensis
IH1]
gi|334856813|gb|AEH07289.1| protein of unknown function DUF98 [Methanothermococcus okinawensis
IH1]
Length=175
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/159 (24%), Positives = 77/159 (49%), Gaps = 23/159 (14%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILK 78
+IL+ +G++T +L I+ +DEV+V+ + Q I + V R +IL+
Sbjct 26 KILLGTDGSITNILEILFNDEVVVKTIYQEI-----------------INNVNYRSVILE 68
Query 79 GRNSEHLFVAAE---SLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGD 135
+ ++ ++ I D + I L + P+G+++ ++ET +E ++ GD
Sbjct 69 IKGIPLIYATSKIPLKNINDDNIRENIKKDLLSADIPIGKILKIHNLETRREIKNIYYGD 128
Query 136 LPGWLALHGYQNSRKRAVARR-YRVISGGQPIMVVTEHF 173
+ + L Y + K A+ +R Y +I + +M +TE F
Sbjct 129 IDNTVKL--YLKTDKNALPQRTYDIIYNNRVLMEITEIF 165
>gi|83648798|ref|YP_437233.1| 4-hydroxybenzoate synthetase [Hahella chejuensis KCTC 2396]
gi|83636841|gb|ABC32808.1| 4-hydroxybenzoate synthetase (chorismate lyase) [Hahella chejuensis
KCTC 2396]
Length=193
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/160 (24%), Positives = 75/160 (47%), Gaps = 12/160 (7%)
Query 18 LRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIIL 77
LR L+ +GT+T+ L + ++V+ + Q + + E++ VL+R + +
Sbjct 33 LRTLLVTDGTVTKTLEAYYWEPLMVEQLGQHEQALE---EDVEEMSCRKGDTVLRRNVCI 89
Query 78 KGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVW----V 133
+G S ++ A S+I LP I +L Q +GE++ +ET+++ A ++
Sbjct 90 RGVESGDIYAYATSIIKTQDLPEQISEQLLQGKIGIGELLREMGLETYRQVADIYREIKQ 149
Query 134 GDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHF 173
+PG + + + R Y + G P++ VTE F
Sbjct 150 EVVPGSSSYYC-----GELICRTYYIYVGHNPVIQVTEKF 184
>gi|288942663|ref|YP_003444903.1| hypothetical protein Alvin_2970 [Allochromatium vinosum DSM 180]
gi|288898035|gb|ADC63871.1| protein of unknown function DUF98 [Allochromatium vinosum DSM
180]
Length=193
Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/165 (28%), Positives = 75/165 (46%), Gaps = 19/165 (11%)
Query 18 LRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGR---VLQRY 74
LR L+ +GT+T++L + V+V ++QR E + + V R L R
Sbjct 45 LRALMVTDGTVTKILEAYFWEPVVVDTLEQRFE------VALEPVPWLDVERGDSCLIRD 98
Query 75 IILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVG 134
L+G +S F A SLI +P RL +G ++ S +E+++E V
Sbjct 99 AQLRGVDSGRCFAEAFSLIRTQLIPPDFRRRLIDREIGIGVLIRDSGLESYREVLDV--- 155
Query 135 DLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFR 179
L + R AV R YR+ QP++++TE+F ++R
Sbjct 156 ------GLERTADGRA-AVFRTYRITIEHQPVILITEYFPLELYR 193
>gi|288559641|ref|YP_003423127.1| hypothetical protein mru_0383 [Methanobrevibacter ruminantium
M1]
gi|288542351|gb|ADC46235.1| hypothetical protein mru_0383 [Methanobrevibacter ruminantium
M1]
Length=187
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/162 (26%), Positives = 83/162 (52%), Gaps = 11/162 (6%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVG-RVLQRYIIL 77
+IL+ +G++T +L+++ ++ ++ ++Q + + +E +L V VG V R II+
Sbjct 32 KILMTTDGSITAILDVLYG-KIALKTLEQHFEEAT---AESAKLVNVDVGDEVNFREIIM 87
Query 78 KGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDL- 136
E + A+S I + RL I L + + P+G ++ HIE+ +E + + D+
Sbjct 88 --HKDEQPLIYAKSYIPLKRLSKEIKEDLVRADIPIGRILKKYHIESRRE---INIIDME 142
Query 137 PGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
L N+ + +AR Y +I G+ +M + E+F S F
Sbjct 143 KANDKLIEIYNTDEDFLARDYTIIKDGEILMWIKEYFPISYF 184
>gi|159904740|ref|YP_001548402.1| hypothetical protein MmarC6_0349 [Methanococcus maripaludis C6]
gi|159886233|gb|ABX01170.1| protein of unknown function DUF98 [Methanococcus maripaludis
C6]
Length=171
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (24%), Positives = 80/168 (48%), Gaps = 21/168 (12%)
Query 9 QEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVG 68
+I L + +IL+ +G++T +L I+ +EV+V+ + Q+I D
Sbjct 16 SKIHGLKNEEKILLGTDGSITNLLEILFGNEVVVETLYQKIID----------------- 58
Query 69 RVLQRYIILKGRNSEHLFVAAES-LIAIDRLP--AAIITRLTQTNDPLGEVMAASHIETF 125
V R ++LK ++ +E+ L +ID + I L + P+G+++ ++ET
Sbjct 59 NVNYRAVLLKVNEIPLIYATSETPLESIDEIHIREKIRKDLLSADIPIGKILKIHNLETR 118
Query 126 KEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHF 173
+E ++ V ++P + + R + R Y +I + IM +TE F
Sbjct 119 REIVEIGVKEVPD-VVISKLNPKRSKIPQRTYNIIHKNKVIMTITEMF 165
>gi|119390675|pdb|2NWI|A Chain A, Crystal Structure Of Protein Af1396 From Archaeoglobus
Fulgidus, Pfam Duf98
gi|119390676|pdb|2NWI|B Chain B, Crystal Structure Of Protein Af1396 From Archaeoglobus
Fulgidus, Pfam Duf98
gi|119390677|pdb|2NWI|C Chain C, Crystal Structure Of Protein Af1396 From Archaeoglobus
Fulgidus, Pfam Duf98
gi|119390678|pdb|2NWI|D Chain D, Crystal Structure Of Protein Af1396 From Archaeoglobus
Fulgidus, Pfam Duf98
gi|119390679|pdb|2NWI|E Chain E, Crystal Structure Of Protein Af1396 From Archaeoglobus
Fulgidus, Pfam Duf98
gi|119390680|pdb|2NWI|F Chain F, Crystal Structure Of Protein Af1396 From Archaeoglobus
Fulgidus, Pfam Duf98
Length=172
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/168 (27%), Positives = 85/168 (51%), Gaps = 9/168 (5%)
Query 14 LNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQR 73
LN RIL+ +G++T ++ V +V V+ ++Q+I +L+E L ++ G +
Sbjct 3 LNAIHRILMTTDGSITAIIEAVTQKKVEVETLEQKIIRADRELAE---LLEIDEGDEVN- 58
Query 74 YIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEE--AKV 131
Y ++ R + ++ A S + RL + L + + P+G++M +IE +E ++V
Sbjct 59 YRVVYLRANGEIYAKAISFTPLKRLENSFREDLMRADIPIGKIMRKHNIEARREIRWSRV 118
Query 132 WVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFR 179
DL L G + +R ++R Y +I G+ ++ +TE F FR
Sbjct 119 EEADLALAKEL-GIAD--RRVISRNYNIIHRGKVLINITEFFPMERFR 163
>gi|11498992|ref|NP_070225.1| hypothetical protein AF1396 [Archaeoglobus fulgidus DSM 4304]
gi|2649178|gb|AAB89851.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length=162
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/163 (26%), Positives = 83/163 (51%), Gaps = 9/163 (5%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILK 78
RIL+ +G++T ++ V +V V+ ++Q+I +L+E L ++ G + Y ++
Sbjct 6 RILMTTDGSITAIIEAVTQKKVEVETLEQKIIRADRELAE---LLEIDEGDEVN-YRVVY 61
Query 79 GRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEE--AKVWVGDL 136
R + ++ A S + RL + L + + P+G++M +IE +E ++V DL
Sbjct 62 LRANGEIYAKAISFTPLKRLENSFREDLMRADIPIGKIMRKHNIEARREIRWSRVEEADL 121
Query 137 PGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFR 179
L G + +R ++R Y +I G+ ++ +TE F FR
Sbjct 122 ALAKEL-GIAD--RRVISRNYNIIHRGKVLINITEFFPMERFR 161
>gi|288869591|ref|ZP_06409471.1| putative UbiC transcription regulator-associated [Methanobrevibacter
smithii DSM 2374]
gi|288861686|gb|EFC93984.1| putative UbiC transcription regulator-associated [Methanobrevibacter
smithii DSM 2374]
Length=201
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/168 (24%), Positives = 83/168 (50%), Gaps = 7/168 (4%)
Query 11 IRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRV 70
I+ + +IL+ +G++T +L+++ ++ + ++Q ++SE L V G
Sbjct 38 IKDFSNTQKILLTTDGSITAILDVLYG-KITLSTLEQHFDTADREISE---LIHVDEGAQ 93
Query 71 LQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAK 130
+ ++ ++ E+L A S I ++RL I L + + P+G ++ IE+ +E K
Sbjct 94 INYREVIMHKDDENLIYAL-SYIPLERLTDEICCDLVRADIPIGRILKNYQIESRREVNK 152
Query 131 VWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
+++ + P L N+++ +AR Y +I +M + E F S F
Sbjct 153 IYI-EKPNE-RLKDLFNTKEDMLAREYVIIHKNNVLMWIKEVFPVSKF 198
>gi|222445721|ref|ZP_03608236.1| hypothetical protein METSMIALI_01363 [Methanobrevibacter smithii
DSM 2375]
gi|222435286|gb|EEE42451.1| hypothetical protein METSMIALI_01363 [Methanobrevibacter smithii
DSM 2375]
Length=201
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/160 (24%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILK 78
+IL+ +G++T +L+++ ++ + ++Q ++SE L V G + ++
Sbjct 46 KILLTTDGSITAILDVLYG-KITLSTLEQHFDTADREISE---LIHVDEGAQINYREVIM 101
Query 79 GRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLPG 138
++ E+L A S I ++RL I L + + P+G ++ IE+ +E K+++ + P
Sbjct 102 HKDDENLIYAL-SYIPLERLTDEICCDLVRADIPIGRILKNYQIESRREVNKIYI-EKPN 159
Query 139 WLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
L N+++ +AR Y +I +M + E F S F
Sbjct 160 E-RLKNLFNTKEDMLAREYVIIHKNNVLMWIKEVFPVSKF 198
>gi|148642784|ref|YP_001273297.1| 4-hydroxybenzoate synthetase (chorismate lyase) [Methanobrevibacter
smithii ATCC 35061]
gi|148551801|gb|ABQ86929.1| 4-hydroxybenzoate synthetase (chorismate lyase) [Methanobrevibacter
smithii ATCC 35061]
Length=187
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/160 (24%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILK 78
+IL+ +G++T +L+++ ++ + ++Q ++SE L V G + ++
Sbjct 32 KILLTTDGSITAILDVLYG-KITLSTLEQHFDTADREISE---LIHVDEGAQINYREVIM 87
Query 79 GRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLPG 138
++ E+L A S I ++RL I L + + P+G ++ IE+ +E K+++ + P
Sbjct 88 HKDDENLIYAL-SYIPLERLTDEICCDLVRADIPIGRILKNYQIESRREVNKIYI-EKPN 145
Query 139 WLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
L N+++ +AR Y +I +M + E F S F
Sbjct 146 E-RLKDLFNTKEDMLAREYVIIHKNNVLMWIKEVFPVSKF 184
>gi|327401894|ref|YP_004342733.1| hypothetical protein Arcve_2026 [Archaeoglobus veneficus SNP6]
gi|327317402|gb|AEA48018.1| protein of unknown function DUF98 [Archaeoglobus veneficus SNP6]
Length=162
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/160 (26%), Positives = 74/160 (47%), Gaps = 5/160 (3%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILK 78
RIL +G++T +L ++ EV V+ V+QR+ + ++E LG + G + Y ++
Sbjct 8 RILATTDGSITAILEAISGREVRVETVEQRVVKANKDIAEI--LG-IDEGEEVN-YRVVN 63
Query 79 GRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLPG 138
+ A S + RL L + + P+G++M IE + E W + G
Sbjct 64 LIAGSDVLAHAVSYTPLKRLRPEFREDLMKADIPIGKIMRKHRIEA-RREINWWKVEKAG 122
Query 139 WLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
L + + R Y +I GG+ ++ +TE+F S F
Sbjct 123 KLTEVFGTGEDEPVLVRNYSIIHGGEVLINITEYFPLSKF 162
>gi|150403477|ref|YP_001330771.1| hypothetical protein MmarC7_1562 [Methanococcus maripaludis C7]
gi|150034507|gb|ABR66620.1| protein of unknown function DUF98 [Methanococcus maripaludis
C7]
Length=171
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/168 (24%), Positives = 80/168 (48%), Gaps = 21/168 (12%)
Query 9 QEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVG 68
+I L + +IL+ +G++T +L I+ +EV+V+ + Q+I D
Sbjct 16 SKIHGLKNEEKILLGTDGSITNLLEILFGEEVVVETLYQKIID----------------- 58
Query 69 RVLQRYIILKGRNSEHLFVAAES-LIAIDRLP--AAIITRLTQTNDPLGEVMAASHIETF 125
V R ++L+ ++ +E+ L +ID + I L + P+G+++ ++ET
Sbjct 59 NVNYRAVLLEVNGIPLIYATSETPLESIDEIHIREKIRNDLLSADIPIGKILKIHNLETR 118
Query 126 KEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHF 173
+E ++ V ++P + + R + R Y +I + IM +TE F
Sbjct 119 REIIEIDVKEVPDEV-ISKLNPKRSKIPQRTYNIIHKNKVIMTITEMF 165
>gi|91773241|ref|YP_565933.1| hypothetical protein Mbur_1262 [Methanococcoides burtonii DSM
6242]
gi|91712256|gb|ABE52183.1| Chorismate--pyruvate lyase [Methanococcoides burtonii DSM 6242]
Length=173
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/169 (24%), Positives = 76/169 (45%), Gaps = 11/169 (6%)
Query 5 FLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQ 64
FL D ++ + LR+ +G++T +L I+ +V V Q I +E L +
Sbjct 8 FLRDLKVFDIPTCLRVCAGTDGSVTFLLEIMTRKDVSVVTEAQHIVKAD---TEMSSLLK 64
Query 65 VGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIET 124
V G + Y ++ + FV A SL I+R+P I + + + P+G+++ S IET
Sbjct 65 VPEGSDVN-YRLVTLFAGDIPFVRALSLSPIERMPGNIRQDMMRADIPIGKILRNSGIET 123
Query 125 FKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHF 173
++ + + D + R ++R Y ++ +M + E F
Sbjct 124 RRDFDNINITDDDPIFDI-------SRVLSRSYHIVHDNNTMMWINERF 165
>gi|312137187|ref|YP_004004524.1| hypothetical protein Mfer_0966 [Methanothermus fervidus DSM 2088]
gi|311224906|gb|ADP77762.1| protein of unknown function DUF98 [Methanothermus fervidus DSM
2088]
Length=174
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/181 (25%), Positives = 92/181 (51%), Gaps = 19/181 (10%)
Query 9 QEIRKLNRDL-------RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQ 61
+ I+K+ +D+ +IL+ +G++TR+L + D V ++ +KQ I KLS+ +
Sbjct 3 KSIKKIEKDVGPLSDVQKILLTTDGSVTRILEALGYD-VNIKAIKQEIVSADKKLSK--E 59
Query 62 LGQVGVGR-VLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITR--LTQTNDPLGEVMA 118
L + +G V R +I++ S+ + A S + I RL + + N P+G+++
Sbjct 60 LN-ISLGEPVNHRVVIIE---SKIPLIYAVSYMPIKRLNKNFKFKRDVMNANIPIGKILK 115
Query 119 ASHIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVF 178
HIE+ +E ++G ++ N+ + +AR Y +I G+ ++ + E F + F
Sbjct 116 KHHIESRREIE--YIGVEKPNDSIKNIFNTNELILARTYNIIHRGEILIRINEKFPITWF 173
Query 179 R 179
+
Sbjct 174 K 174
>gi|134046096|ref|YP_001097582.1| hypothetical protein MmarC5_1064 [Methanococcus maripaludis C5]
gi|132663721|gb|ABO35367.1| protein of unknown function DUF98 [Methanococcus maripaludis
C5]
Length=171
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/158 (24%), Positives = 74/158 (47%), Gaps = 21/158 (13%)
Query 19 RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILK 78
+IL+ +G++T +L I+ +EV+V+ + Q I D V R ++L
Sbjct 26 KILLGTDGSITNLLEILFGNEVVVETLHQEIMD-----------------NVNYRAVLLG 68
Query 79 GRNSEHLFVAAES-LIAIDRLP--AAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGD 135
++ +E+ L +ID + I L + P+G+++ ++ET +E ++ V +
Sbjct 69 VNGIPLIYATSETPLESIDEIQIREKIRKDLLSADIPIGKILKIHNLETRREIVEIEVKE 128
Query 136 LPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHF 173
+P + + R + R Y +I + IM +TE F
Sbjct 129 VPDSV-ITKLNPKRSKIPQRTYNIIHKNKVIMTITEMF 165
>gi|325959794|ref|YP_004291260.1| hypothetical protein Metbo_2069 [Methanobacterium sp. AL-21]
gi|325331226|gb|ADZ10288.1| protein of unknown function DUF98 [Methanobacterium sp. AL-21]
Length=177
Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/173 (22%), Positives = 86/173 (50%), Gaps = 8/173 (4%)
Query 8 DQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGV 67
+ E+ +L+ +IL+ +G++T +L+++ ++ ++Q+ + K++ +L + V
Sbjct 13 ESEVGELSNAQKILLTTDGSITAILDVIKG-HAKIETLEQKFIEADEKIA---KLLDIEV 68
Query 68 GRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKE 127
G + +++ N ++ A SLI IDRL + + + P+G ++ IE+ +E
Sbjct 69 GDEVNYRVVVIETNEPLIY--AVSLIPIDRLEKDFKEDIIRADIPIGRILRKHKIESRRE 126
Query 128 EAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD 180
V+ + P + N+ +AR Y +I + ++ + E F S FR+
Sbjct 127 IKSVY-SEKPSP-EIGEIFNTDSVMLARTYNIIHHNEILIWLMETFPYSNFRN 177
>gi|171057941|ref|YP_001790290.1| hypothetical protein Lcho_1256 [Leptothrix cholodnii SP-6]
gi|170775386|gb|ACB33525.1| protein of unknown function DUF98 [Leptothrix cholodnii SP-6]
Length=188
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/171 (26%), Positives = 77/171 (46%), Gaps = 17/171 (9%)
Query 15 NRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVG-RVLQR 73
R+L++L+A +G+ TR+ +VA V +Q++ Q+I P ++G+ G R ++R
Sbjct 28 QRELQLLLAQDGSATRLCEVVAAGAVALQLLDQQIVGRVPA-----EVGERLPGSRFIER 82
Query 74 YIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWV 133
L + + S IA+D L A + L + P+G ++A + + +
Sbjct 83 ITCLHAHG--EVMMDNLSYIALDGLAADVRRELEEGVTPIGHLLARMWVR------RAFF 134
Query 134 GDLPGWLA--LHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRDAP 182
P L L G R Y + + P M++TE F R + R AP
Sbjct 135 DAPPPALCERLWGVVGLPDAGATRSYCITTPEGPCMLITETFRRGM-RMAP 184
>gi|336477480|ref|YP_004616621.1| hypothetical protein Mzhil_1564 [Methanosalsum zhilinae DSM 4017]
gi|335930861|gb|AEH61402.1| protein of unknown function DUF98 [Methanosalsum zhilinae DSM
4017]
Length=168
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/156 (22%), Positives = 71/156 (46%), Gaps = 11/156 (7%)
Query 18 LRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIIL 77
LR+ +G++T +L I+ ++V V Q + +++ LG V R + L
Sbjct 16 LRVCAGTDGSVTFLLEIMTRNDVSVITENQHVVKADNEMASV--LGVNPDEDVNLRTVTL 73
Query 78 KGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLP 137
+ E +V A S+ + R+P + L + + P+G+++ IET ++ + + +
Sbjct 74 MAGDVE--YVHATSMSPLSRMPPGMQQDLMRADIPIGKILRNHGIETRRDFETIRLDNGE 131
Query 138 GWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHF 173
H + ++R YR++ G +M + E F
Sbjct 132 DLFGCH-------KVLSRTYRIMHHGYTLMWIKESF 160
>gi|254788336|ref|YP_003075765.1| 4-hydroxybenzoate synthetase [Teredinibacter turnerae T7901]
gi|237687286|gb|ACR14550.1| 4-hydroxybenzoate synthetase [Teredinibacter turnerae T7901]
Length=206
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/185 (25%), Positives = 87/185 (48%), Gaps = 18/185 (9%)
Query 2 TECFLSDQEIRKLNRD----------LRILIAANGTLTRVLNIVADDEVIVQIVKQRIHD 51
++ +LS+ I N + LR L+ +GT+T+ L + V V +
Sbjct 20 SQGYLSEATIPGFNAEQLAMANLPPLLRTLLITDGTVTKSLEAFFWEPVTVDTILLETVT 79
Query 52 VSPKLSEFEQLGQVGVGR-VLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTN 110
+ +++ E V G VL R + L+G S+ ++ A S++ + L I LT
Sbjct 80 AARQVNWLE----VTPGEEVLLREVQLRGTQSQRIYATAFSVVRLSVLAPEIREALTSGK 135
Query 111 DPLGEVMAASHIETFKEEAKVWVGDLPGWLALHGYQNSRKRA--VARRYRVISGGQPIMV 168
+G ++ S +E+++E + D +L ++ + A V+R YR+I+ QP ++
Sbjct 136 VGIGVLIRDSGLESYREILDI-KADNREFLLTAEKPDAPQAADIVSRTYRIIANHQPAIL 194
Query 169 VTEHF 173
+TE+F
Sbjct 195 ITENF 199
>gi|15668993|ref|NP_247797.1| hypothetical protein MJ_0807 [Methanocaldococcus jannaschii DSM
2661]
gi|2833606|sp|Q58217.1|Y807_METJA RecName: Full=Uncharacterized protein MJ0807
gi|1591499|gb|AAB98807.1| conserved hypothetical protein [Methanocaldococcus jannaschii
DSM 2661]
Length=184
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/174 (23%), Positives = 78/174 (45%), Gaps = 27/174 (15%)
Query 9 QEIRKLNRDL------RILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQL 62
+EI KLN+ +IL+ +G++T +L I+ + E V+ + Q+I
Sbjct 15 KEIAKLNKTFPLLNEEKILLGTDGSVTNILEILFEGECRVETINQKI------------- 61
Query 63 GQVGVGRVLQRYIILKGRNSEHLFVAAESL---IAIDRLPAAIITRLTQTNDPLGEVMAA 119
V R +ILK N ++ +++ I + L I L + P+G+++
Sbjct 62 ----VANTNYREVILKVNNIPLVYAVSKTPFKNIEEENLREEIKRDLLSADIPIGKIIRK 117
Query 120 SHIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHF 173
++ET +E + + ++ +L + + R R Y +I + +M +TE F
Sbjct 118 HNLETRREIKYIGIAEIDDYLK-SLLKTNYSRLPKRTYNIIYKNKVLMEITEIF 170
Lambda K H
0.323 0.137 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 215040480604
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40