BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2956
Length=243
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610093|ref|NP_217472.1| hypothetical protein Rv2956 [Mycoba... 499 2e-139
gi|31794132|ref|NP_856625.1| hypothetical protein Mb2980 [Mycoba... 497 5e-139
gi|289755071|ref|ZP_06514449.1| conserved hypothetical protein [... 497 6e-139
gi|289448624|ref|ZP_06438368.1| conserved hypothetical protein [... 496 1e-138
gi|289571150|ref|ZP_06451377.1| conserved hypothetical protein [... 496 1e-138
gi|289746755|ref|ZP_06506133.1| conserved hypothetical protein [... 446 1e-123
gi|240171779|ref|ZP_04750438.1| hypothetical protein MkanA1_2086... 422 2e-116
gi|308231860|ref|ZP_07414041.2| hypothetical protein TMAG_02843 ... 339 2e-91
gi|15608651|ref|NP_216029.1| hypothetical protein Rv1513 [Mycoba... 339 3e-91
gi|289447123|ref|ZP_06436867.1| conserved hypothetical protein [... 338 3e-91
gi|340626532|ref|YP_004744984.1| hypothetical protein MCAN_15341... 335 2e-90
gi|323719960|gb|EGB29072.1| hypothetical protein TMMG_00773 [Myc... 335 5e-90
gi|41407331|ref|NP_960167.1| hypothetical protein MAP1233 [Mycob... 333 2e-89
gi|336457967|gb|EGO36955.1| methyltransferase, FkbM family [Myco... 332 2e-89
gi|254775704|ref|ZP_05217220.1| hypothetical protein MaviaA2_137... 331 5e-89
gi|3550480|emb|CAA11577.1| gsc [Mycobacterium avium subsp. parat... 331 5e-89
gi|294996482|ref|ZP_06802173.1| hypothetical protein Mtub2_18756... 253 2e-65
gi|159028936|emb|CAO87397.1| unnamed protein product [Microcysti... 199 4e-49
gi|333982907|ref|YP_004512117.1| methyltransferase FkbM family [... 196 3e-48
gi|323718428|gb|EGB27601.1| hypothetical protein TMMG_03479 [Myc... 187 2e-45
gi|296170617|ref|ZP_06852193.1| conserved hypothetical protein [... 185 4e-45
gi|311744524|ref|ZP_07718324.1| methyltransferase [Aeromicrobium... 179 2e-43
gi|332667368|ref|YP_004450156.1| FkbM family methyltransferase [... 162 4e-38
gi|289763134|ref|ZP_06522512.1| conserved hypothetical protein [... 155 4e-36
gi|311744534|ref|ZP_07718334.1| methyltransferase FkbM [Aeromicr... 135 8e-30
gi|291303745|ref|YP_003515023.1| methyltransferase FkbM family [... 124 1e-26
gi|302547620|ref|ZP_07299962.1| putative LigA [Streptomyces hygr... 117 2e-24
gi|26546923|gb|AAN05766.1| unknown [Mycobacterium avium] 117 2e-24
gi|94498710|ref|ZP_01305260.1| hypothetical protein SKA58_11615 ... 115 8e-24
gi|119474953|ref|ZP_01615306.1| hypothetical protein GP2143_1407... 114 1e-23
gi|307133565|dbj|BAJ19055.1| putative methyltransferase [Strepto... 106 3e-21
gi|270341303|dbj|BAI53084.1| putative O-methyltransferase [Strep... 105 4e-21
gi|209967250|ref|YP_002300165.1| methyltransferase, FkbM family,... 105 4e-21
gi|294011502|ref|YP_003544962.1| SAM-dependent methyltransferase... 103 2e-20
gi|257092580|ref|YP_003166221.1| FkbM family methyltransferase [... 103 3e-20
gi|334344866|ref|YP_004553418.1| FkbM family methyltransferase [... 102 7e-20
gi|311746616|ref|ZP_07720401.1| methyltransferase [Algoriphagus ... 100 1e-19
gi|345137144|dbj|BAK66753.1| hypothetical protein SLG_20780 [Sph... 99.8 3e-19
gi|319760824|ref|YP_004124761.1| methyltransferase fkbm family [... 99.4 4e-19
gi|77165008|ref|YP_343533.1| methyltransferase FkbM [Nitrosococc... 99.4 4e-19
gi|170077759|ref|YP_001734397.1| methyltransferase, FkbM family ... 93.6 2e-17
gi|332525295|ref|ZP_08401464.1| methyltransferase FkbM family pr... 92.8 3e-17
gi|124515961|gb|EAY57470.1| Methyltransferase, FkbM family [Lept... 92.4 5e-17
gi|206601978|gb|EDZ38460.1| Methyltransferase, FkbM family [Lept... 91.3 1e-16
gi|189218559|ref|YP_001939200.1| SAM-dependent methyltransferase... 90.1 3e-16
gi|312115816|ref|YP_004013412.1| FkbM family methyltransferase [... 88.6 8e-16
gi|170739387|ref|YP_001768042.1| FkbM family methyltransferase [... 87.0 2e-15
gi|85374467|ref|YP_458529.1| methyltransferase, FkbM family prot... 84.3 1e-14
gi|220935273|ref|YP_002514172.1| hypothetical protein Tgr7_2105 ... 84.3 2e-14
gi|220935263|ref|YP_002514162.1| methyltransferase FkbM [Thioalk... 84.0 2e-14
>gi|15610093|ref|NP_217472.1| hypothetical protein Rv2956 [Mycobacterium tuberculosis H37Rv]
gi|15842505|ref|NP_337542.1| hypothetical protein MT3030 [Mycobacterium tuberculosis CDC1551]
gi|148662803|ref|YP_001284326.1| hypothetical protein MRA_2983 [Mycobacterium tuberculosis H37Ra]
61 more sequence titles
Length=243
Score = 499 bits (1285), Expect = 2e-139, Method: Compositional matrix adjust.
Identities = 242/243 (99%), Positives = 243/243 (100%), Gaps = 0/243 (0%)
Query 1 VKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
+KSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
Query 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID
Sbjct 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
Query 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
Query 241 EDD 243
EDD
Sbjct 241 EDD 243
>gi|31794132|ref|NP_856625.1| hypothetical protein Mb2980 [Mycobacterium bovis AF2122/97]
gi|121638837|ref|YP_979061.1| hypothetical protein BCG_2977 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991329|ref|YP_002646018.1| hypothetical protein JTY_2972 [Mycobacterium bovis BCG str. Tokyo
172]
gi|31619727|emb|CAD96667.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121494485|emb|CAL72966.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224774444|dbj|BAH27250.1| hypothetical protein JTY_2972 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341602876|emb|CCC65554.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=243
Score = 497 bits (1280), Expect = 5e-139, Method: Compositional matrix adjust.
Identities = 241/243 (99%), Positives = 242/243 (99%), Gaps = 0/243 (0%)
Query 1 VKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
+KSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
Query 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID
Sbjct 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
Query 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADG FFR
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGTFFR 240
Query 241 EDD 243
EDD
Sbjct 241 EDD 243
>gi|289755071|ref|ZP_06514449.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289695658|gb|EFD63087.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=243
Score = 497 bits (1280), Expect = 6e-139, Method: Compositional matrix adjust.
Identities = 241/243 (99%), Positives = 242/243 (99%), Gaps = 0/243 (0%)
Query 1 VKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
+KSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQ SSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQRSSVLPM 120
Query 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID
Sbjct 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
Query 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
Query 241 EDD 243
EDD
Sbjct 241 EDD 243
>gi|289448624|ref|ZP_06438368.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289421582|gb|EFD18783.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=243
Score = 496 bits (1277), Expect = 1e-138, Method: Compositional matrix adjust.
Identities = 241/243 (99%), Positives = 242/243 (99%), Gaps = 0/243 (0%)
Query 1 VKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
+KSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
Query 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
LKSHQNAFPPANYV TQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID
Sbjct 121 LKSHQNAFPPANYVDTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
Query 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
Query 241 EDD 243
EDD
Sbjct 241 EDD 243
>gi|289571150|ref|ZP_06451377.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289544904|gb|EFD48552.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=243
Score = 496 bits (1277), Expect = 1e-138, Method: Compositional matrix adjust.
Identities = 241/243 (99%), Positives = 242/243 (99%), Gaps = 0/243 (0%)
Query 1 VKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
+KSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
Query 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLA GKSTID
Sbjct 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLARGKSTID 180
Query 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
Query 241 EDD 243
EDD
Sbjct 241 EDD 243
>gi|289746755|ref|ZP_06506133.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289687283|gb|EFD54771.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=542
Score = 446 bits (1148), Expect = 1e-123, Method: Compositional matrix adjust.
Identities = 218/219 (99%), Positives = 219/219 (100%), Gaps = 0/219 (0%)
Query 1 VKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
+KSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
Query 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID
Sbjct 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
Query 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGL 219
DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGL
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGL 219
>gi|240171779|ref|ZP_04750438.1| hypothetical protein MkanA1_20865 [Mycobacterium kansasii ATCC
12478]
Length=243
Score = 422 bits (1085), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 203/236 (87%), Positives = 214/236 (91%), Gaps = 0/236 (0%)
Query 6 LARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKGR 65
LARFI RSAAFEV RRYSERDL+HQFVKQL+ RRVDVVFDVGAN+GQYA GLRRA YKGR
Sbjct 6 LARFIVRSAAFEVPRRYSERDLRHQFVKQLELRRVDVVFDVGANTGQYAKGLRRAGYKGR 65
Query 66 IVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQ 125
IVSFEPLS PFT LE KA TDPLWDCRQ ALGD+DGTV++N+AGNAGQSSSVLPML HQ
Sbjct 66 IVSFEPLSRPFTTLERKAVTDPLWDCRQCALGDADGTVSVNVAGNAGQSSSVLPMLTRHQ 125
Query 126 NAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVG 185
AFPPANYVGT+EA IHRLDSVAPEFL NG AFLKVDVQGFEKQVL G KST++D CVG
Sbjct 126 EAFPPANYVGTEEAPIHRLDSVAPEFLRPNGAAFLKVDVQGFEKQVLDGAKSTVNDQCVG 185
Query 186 MQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFRE 241
MQLELSF PLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDA NGRMLQADGIFFR+
Sbjct 186 MQLELSFAPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDARNGRMLQADGIFFRD 241
>gi|308231860|ref|ZP_07414041.2| hypothetical protein TMAG_02843 [Mycobacterium tuberculosis SUMu001]
gi|308369461|ref|ZP_07417862.2| hypothetical protein TMBG_00067 [Mycobacterium tuberculosis SUMu002]
gi|308370740|ref|ZP_07422576.2| hypothetical protein TMCG_03627 [Mycobacterium tuberculosis SUMu003]
15 more sequence titles
Length=270
Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/239 (70%), Positives = 188/239 (79%), Gaps = 0/239 (0%)
Query 5 KLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKG 64
+ AR I R EVSR ++E D + F++QL+S RV V DVGANSGQYA GLR A + G
Sbjct 32 RRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAG 91
Query 65 RIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSH 124
RIVSFEPL GPF +L+ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSSVLPMLK H
Sbjct 92 RIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRH 151
Query 125 QNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCV 184
Q+AFPPANYVG Q IHRLDSVA + L N +AFLK+DVQGFEKQV+AGG ST+ D CV
Sbjct 152 QDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCV 211
Query 185 GMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
GMQLELSF PLYEGGMLI EALDLV SLGFTL+GL P F D NGRMLQADGIFFR D
Sbjct 212 GMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD 270
>gi|15608651|ref|NP_216029.1| hypothetical protein Rv1513 [Mycobacterium tuberculosis H37Rv]
gi|15840979|ref|NP_336016.1| hypothetical protein MT1563 [Mycobacterium tuberculosis CDC1551]
gi|148661309|ref|YP_001282832.1| hypothetical protein MRA_1525 [Mycobacterium tuberculosis H37Ra]
49 more sequence titles
Length=243
Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 166/239 (70%), Positives = 188/239 (79%), Gaps = 0/239 (0%)
Query 5 KLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKG 64
+ AR I R EVSR ++E D + F++QL+S RV V DVGANSGQYA GLR A + G
Sbjct 5 RRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAG 64
Query 65 RIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSH 124
RIVSFEPL GPF +L+ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSSVLPMLK H
Sbjct 65 RIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRH 124
Query 125 QNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCV 184
Q+AFPPANYVG Q IHRLDSVA + L N +AFLK+DVQGFEKQV+AGG ST+ D CV
Sbjct 125 QDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCV 184
Query 185 GMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
GMQLELSF PLYEGGMLI EALDLV SLGFTL+GL P F D NGRMLQADGIFFR D
Sbjct 185 GMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD 243
>gi|289447123|ref|ZP_06436867.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289420081|gb|EFD17282.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=243
Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 166/239 (70%), Positives = 188/239 (79%), Gaps = 0/239 (0%)
Query 5 KLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKG 64
+ AR I R EVSR ++E D + F++QL+S RV V DVGANSGQYA GLR A + G
Sbjct 5 RHARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAG 64
Query 65 RIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSH 124
RIVSFEPL GPF +L+ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSSVLPMLK H
Sbjct 65 RIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRH 124
Query 125 QNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCV 184
Q+AFPPANYVG Q IHRLDSVA + L N +AFLK+DVQGFEKQV+AGG ST+ D CV
Sbjct 125 QDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCV 184
Query 185 GMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
GMQLELSF PLYEGGMLI EALDLV SLGFTL+GL P F D NGRMLQADGIFFR D
Sbjct 185 GMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD 243
>gi|340626532|ref|YP_004744984.1| hypothetical protein MCAN_15341 [Mycobacterium canettii CIPT
140010059]
gi|340004722|emb|CCC43866.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=244
Score = 335 bits (860), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/239 (70%), Positives = 187/239 (79%), Gaps = 0/239 (0%)
Query 5 KLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKG 64
+ AR I R +VSR + E D + F++QL+S RV VV DVGANSGQYA GLR A + G
Sbjct 6 RRARNILRRNGLDVSRYFPELDWERNFMRQLQSHRVSVVLDVGANSGQYARGLRGAGFAG 65
Query 65 RIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSH 124
RIVSFEPL GPF L+ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSSVLPMLK H
Sbjct 66 RIVSFEPLPGPFAGLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRH 125
Query 125 QNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCV 184
Q+AFPPANYVG Q IHRLDSVA + L N +AFLK+DVQGFEKQV+AGG ST+ D CV
Sbjct 126 QDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCV 185
Query 185 GMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
GMQLELSF PLYEGGMLI EALDLV SLGFTL+GL P F D NGRMLQADGIFFR D
Sbjct 186 GMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD 244
>gi|323719960|gb|EGB29072.1| hypothetical protein TMMG_00773 [Mycobacterium tuberculosis CDC1551A]
Length=233
Score = 335 bits (858), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 163/232 (71%), Positives = 184/232 (80%), Gaps = 0/232 (0%)
Query 12 RSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEP 71
R EVSR ++E D + F++QL+S RV V DVGANSGQYA GLR A + GRIVSFEP
Sbjct 2 RRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFEP 61
Query 72 LSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPA 131
L GPF +L+ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSSVLPMLK HQ+AFPPA
Sbjct 62 LPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPA 121
Query 132 NYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELS 191
NYVG Q IHRLDSVA + L N +AFLK+DVQGFEKQV+AGG ST+ D CVGMQLELS
Sbjct 122 NYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELS 181
Query 192 FLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
F PLYEGGMLI EALDLV SLGFTL+GL P F D NGRMLQADGIFFR D
Sbjct 182 FQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD 233
>gi|41407331|ref|NP_960167.1| hypothetical protein MAP1233 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395683|gb|AAS03550.1| hypothetical protein MAP_1233 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=240
Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/240 (68%), Positives = 193/240 (81%), Gaps = 3/240 (1%)
Query 4 LKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYK 63
L+ A +AR+ + E+ R + + L V Q K+ V+VV DVGANSGQ+ + LRRA +K
Sbjct 4 LRNAGLMARNVSTEMLRHFERKRL---LVNQFKAYGVNVVIDVGANSGQFGSALRRAGFK 60
Query 64 GRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKS 123
RIVSFEPLSGPF L K+++DPLW+C Q+ALGD+D T+TIN+AGNAG SSSVLPMLKS
Sbjct 61 SRIVSFEPLSGPFAQLTRKSASDPLWECHQYALGDADETITINVAGNAGASSSVLPMLKS 120
Query 124 HQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHC 183
HQ+AFPPANY+GT++ +IHRLDSVA EFL V FLK+DVQGFEKQV+AG KST+++ C
Sbjct 121 HQDAFPPANYIGTEDVAIHRLDSVASEFLNPTDVTFLKIDVQGFEKQVIAGSKSTLNESC 180
Query 184 VGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
VGMQLELSF+PLYEG MLI EAL+LVYSLGF LTGLLP F D NGRMLQADGIFFR DD
Sbjct 181 VGMQLELSFIPLYEGDMLIHEALELVYSLGFRLTGLLPGFTDPRNGRMLQADGIFFRGDD 240
>gi|336457967|gb|EGO36955.1| methyltransferase, FkbM family [Mycobacterium avium subsp. paratuberculosis
S397]
Length=240
Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/240 (68%), Positives = 193/240 (81%), Gaps = 3/240 (1%)
Query 4 LKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYK 63
L+ A +AR+ + E+ R + + L V Q K+ V+VV DVGANSGQ+ + LRRA +K
Sbjct 4 LRNAGLMARNVSTEMLRHFERKRL---LVNQFKAYGVNVVIDVGANSGQFGSALRRAGFK 60
Query 64 GRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKS 123
RIVSFEPLSGPF L K+++DPLW+C Q+ALGD+D T+TIN+AGNAG SSSVLPMLKS
Sbjct 61 SRIVSFEPLSGPFAQLARKSASDPLWECHQYALGDADETITINVAGNAGASSSVLPMLKS 120
Query 124 HQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHC 183
HQ+AFPPANY+GT++ +IHRLDSVA EFL V FLK+DVQGFEKQV+AG KST+++ C
Sbjct 121 HQDAFPPANYIGTEDVAIHRLDSVASEFLNPTDVTFLKIDVQGFEKQVIAGSKSTLNESC 180
Query 184 VGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
VGMQLELSF+PLYEG MLI EAL+LVYSLGF LTGLLP F D NGRMLQADGIFFR DD
Sbjct 181 VGMQLELSFIPLYEGDMLIHEALELVYSLGFRLTGLLPGFTDPRNGRMLQADGIFFRGDD 240
>gi|254775704|ref|ZP_05217220.1| hypothetical protein MaviaA2_13700 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|5524328|gb|AAD44221.1|AF143772_27 unknown [Mycobacterium avium]
gi|3550475|emb|CAA11573.1| gsc [Mycobacterium avium subsp. silvaticum]
gi|4416475|gb|AAD20375.1| unknown [Mycobacterium avium]
Length=240
Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/240 (67%), Positives = 192/240 (80%), Gaps = 3/240 (1%)
Query 4 LKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYK 63
L+ A +AR+ + E+ R + + L V Q K+ V+VV DVGANSGQ+ + LRRA +K
Sbjct 4 LRNAGLMARNVSTEMLRHFERKRL---LVNQFKAYGVNVVIDVGANSGQFGSALRRAGFK 60
Query 64 GRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKS 123
RIVSFEPLSGPF L K+++DPLW+C Q+ALGD+D T+TIN+AGNAG SSSVLPMLKS
Sbjct 61 SRIVSFEPLSGPFAQLTRKSASDPLWECHQYALGDADETITINVAGNAGASSSVLPMLKS 120
Query 124 HQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHC 183
HQ+AFPPANY+GT++ +IHRLDSVA EFL V FLK+DVQGFEKQV+ G KST+++ C
Sbjct 121 HQDAFPPANYIGTEDVAIHRLDSVASEFLNPTDVTFLKIDVQGFEKQVITGSKSTLNESC 180
Query 184 VGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
VGMQLELSF+PLYEG MLI EAL+LVYSLGF LTGLLP F D NGRMLQADGIFFR DD
Sbjct 181 VGMQLELSFIPLYEGDMLIHEALELVYSLGFRLTGLLPGFTDPRNGRMLQADGIFFRGDD 240
>gi|3550480|emb|CAA11577.1| gsc [Mycobacterium avium subsp. paratuberculosis]
Length=240
Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/240 (67%), Positives = 193/240 (81%), Gaps = 3/240 (1%)
Query 4 LKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYK 63
L+ A +AR+ + E+ R + + L V Q K+ V+VV DVGANSGQ+ + LRRA +K
Sbjct 4 LRNAGLMARNVSTEMLRHFERKRL---LVNQFKAYGVNVVIDVGANSGQFGSALRRAGFK 60
Query 64 GRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKS 123
RIVSFEPLSGPF L ++++DPLW+C Q+ALGD+D T+TIN+AGNAG SSSVLPMLKS
Sbjct 61 SRIVSFEPLSGPFAQLTRESASDPLWECHQYALGDADETITINVAGNAGASSSVLPMLKS 120
Query 124 HQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHC 183
HQ+AFPPANY+GT++ +IHRLDSVA EFL V FLK+DVQGFEKQV+AG KST+++ C
Sbjct 121 HQDAFPPANYIGTEDVAIHRLDSVASEFLNPTDVTFLKIDVQGFEKQVIAGSKSTLNESC 180
Query 184 VGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
VGMQLELSF+PLYEG MLI EAL+LVYSLGF LTGLLP F D NGRMLQADGIFFR DD
Sbjct 181 VGMQLELSFIPLYEGDMLIHEALELVYSLGFRLTGLLPGFTDPRNGRMLQADGIFFRGDD 240
>gi|294996482|ref|ZP_06802173.1| hypothetical protein Mtub2_18756 [Mycobacterium tuberculosis
210]
Length=165
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/165 (74%), Positives = 136/165 (83%), Gaps = 0/165 (0%)
Query 79 LESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQE 138
++ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSSVLPMLK HQ+AFPPANYVG Q
Sbjct 1 MQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQR 60
Query 139 ASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEG 198
IHRLDSVA + L N +AFLK+DVQGFEKQV+AGG ST+ D CVGMQLELSF PLYEG
Sbjct 61 VPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEG 120
Query 199 GMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
GMLI EALDLV SLGFTL+GL P F D NGRMLQADGIFFR D
Sbjct 121 GMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD 165
>gi|159028936|emb|CAO87397.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length=241
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/240 (44%), Positives = 150/240 (63%), Gaps = 4/240 (1%)
Query 5 KLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKG 64
K+ + ++RS ++ R + + + L +D+VFDVGAN GQYA LR Y G
Sbjct 4 KIVKKLSRSLGIDLKRYNVQTSEAAKMQRLLAYHNIDLVFDVGANIGQYAKLLRELGYSG 63
Query 65 RIVSFEPLSGPFTILESKASTDPLWDCR-QHALGDSDGTVTINIAGNAGQSSSVLPMLKS 123
RIVSFEPLS ++ L++ + DPLW+ Q A+G+ +G + INIAGN+ QSSS LPML +
Sbjct 64 RIVSFEPLSSAYSQLKAVSEKDPLWEIAPQTAIGNQEGEIIINIAGNS-QSSSALPMLDA 122
Query 124 HQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVA-FLKVDVQGFEKQVLAGGKSTIDDH 182
H + P + Y G++ + RLD++A +++ + FLK+DVQG EKQVL G + I
Sbjct 123 HVQSAPESAYSGSETVKLSRLDTLAKDYIKSETKSIFLKIDVQGLEKQVLEGA-TAILPL 181
Query 183 CVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFRED 242
G++LELS +PLYEG +L E + +V LG+ L G+ P F GRMLQ DGIFF+ D
Sbjct 182 VKGIKLELSLVPLYEGQVLFKEMIHIVEKLGYELYGIEPGFTAEKTGRMLQMDGIFFKPD 241
>gi|333982907|ref|YP_004512117.1| methyltransferase FkbM family [Methylomonas methanica MC09]
gi|333806948|gb|AEF99617.1| methyltransferase FkbM family [Methylomonas methanica MC09]
Length=243
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/238 (47%), Positives = 148/238 (63%), Gaps = 3/238 (1%)
Query 5 KLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKG 64
KL R R F++ R + + Q +K L+ +VD+VFD+GAN+GQ+A+ LRR YKG
Sbjct 4 KLIRGGLRKVGFDLHRLLTVSNPAFQLLKGLERFQVDLVFDIGANTGQFASELRRIGYKG 63
Query 65 RIVSFEPLSGPFTILESKASTDPLWDC-RQHALGDSDGTVTINIAGNAGQSSSVLPMLKS 123
++VSFEPLS +L+ A DP W Q A+GD+DG + IN+AGN+ SSSVLPML
Sbjct 64 QLVSFEPLSVAHRVLKKTAERDPGWIVHEQCAIGDTDGEIEINVAGNS-VSSSVLPMLDI 122
Query 124 HQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHC 183
H A + YVG++ +I+RLDSVAP +L + F+KVD QG+E QVL GG+ T
Sbjct 123 HSFAAKGSAYVGSEMVAINRLDSVAPSYLQNSNRYFVKVDTQGYEWQVLDGGRETF-AKA 181
Query 184 VGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFRE 241
G+ ELS PLYEG L + L + S GFTL + F D +GR LQ D +FFRE
Sbjct 182 QGVLCELSLTPLYEGQRLWMDMLQRLNSEGFTLWSIQKGFTDPRDGRTLQVDAVFFRE 239
>gi|323718428|gb|EGB27601.1| hypothetical protein TMMG_03479 [Mycobacterium tuberculosis CDC1551A]
Length=90
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/90 (100%), Positives = 90/90 (100%), Gaps = 0/90 (0%)
Query 154 MNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYSLG 213
MNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYSLG
Sbjct 1 MNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYSLG 60
Query 214 FTLTGLLPCFIDANNGRMLQADGIFFREDD 243
FTLTGLLPCFIDANNGRMLQADGIFFREDD
Sbjct 61 FTLTGLLPCFIDANNGRMLQADGIFFREDD 90
>gi|296170617|ref|ZP_06852193.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894708|gb|EFG74441.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=124
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/122 (74%), Positives = 99/122 (82%), Gaps = 0/122 (0%)
Query 120 MLKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTI 179
MLKSHQ AFPPANY+GT++ I RLDSVAP+ LG FLK+DVQGFE+QVLAG KST+
Sbjct 1 MLKSHQEAFPPANYIGTEDVLIRRLDSVAPDVLGSADQFFLKIDVQGFERQVLAGAKSTV 60
Query 180 DDHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFF 239
D CVGMQLELSF PLYEGGML EALDLV S GFTL GL+P F D +GRMLQADGIFF
Sbjct 61 ADRCVGMQLELSFFPLYEGGMLFREALDLVESFGFTLMGLIPGFADPRDGRMLQADGIFF 120
Query 240 RE 241
RE
Sbjct 121 RE 122
>gi|311744524|ref|ZP_07718324.1| methyltransferase [Aeromicrobium marinum DSM 15272]
gi|311312143|gb|EFQ82060.1| methyltransferase [Aeromicrobium marinum DSM 15272]
Length=241
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/218 (49%), Positives = 133/218 (62%), Gaps = 6/218 (2%)
Query 28 KHQFVKQ---LKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKAS 84
+H V++ L VD+V DVGA G Y + LR Y G IVSFEPLS PF L + +
Sbjct 24 RHSAVRRQSVLTRHGVDLVLDVGAAGGGYGSSLRAFGYTGDIVSFEPLSTPFADLGAVIA 83
Query 85 TDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRL 144
DP W R ALG G V IN+A N+ SSS+LPML +H +A P YVGT+ ++ RL
Sbjct 84 GDPRWTARNVALGQEAGEVVINVASNS-TSSSILPMLDAHVDAAPQVTYVGTETVTVARL 142
Query 145 DSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPE 204
D A E + + FLK+D QGFE++VLAGG T+ CVG+QLELS +PLY GGMLI E
Sbjct 143 DDEAREVVAGHRRPFLKIDTQGFEREVLAGGADTV-AACVGLQLELSLVPLYGGGMLIDE 201
Query 205 ALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFRED 242
A+ Y GF + GL + A G +LQ DG+F R D
Sbjct 202 AVSWAYDHGFRMVGLEQGYA-APTGEILQIDGVFVRAD 238
>gi|332667368|ref|YP_004450156.1| FkbM family methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332336182|gb|AEE53283.1| methyltransferase FkbM family [Haliscomenobacter hydrossis DSM
1100]
Length=239
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/221 (39%), Positives = 130/221 (59%), Gaps = 3/221 (1%)
Query 21 RYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILE 80
+Y + D+ + +K + + +DVVFDVGAN GQYA +R Y +I+SFEPL F L+
Sbjct 18 QYPDEDMSRR-MKIISTNHIDVVFDVGANIGQYARKMRAYGYNKKIISFEPLHSAFEQLK 76
Query 81 SKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEAS 140
A+ D W +ALGD D INI+ N+ SSS+L +L +H ++ P + Y+ +E
Sbjct 77 IVAAKDNNWILNNYALGDEDVKSVINISDNS-YSSSILNILPTHLDSAPQSKYIAKEEIE 135
Query 141 IHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGM 200
I ++D++ F +K+D QG+EK V+ G +++D V +QLE+S LPLYE M
Sbjct 136 IKKIDTIFDSFCNNGDNVMVKIDTQGYEKNVIDGATASLDKIKV-IQLEMSILPLYENEM 194
Query 201 LIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFRE 241
L + ++ + GF L L F D N G++LQ DGIF ++
Sbjct 195 LYMDMINYLDKQGFQLFSLENGFSDENTGQLLQVDGIFVQK 235
>gi|289763134|ref|ZP_06522512.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289710640|gb|EFD74656.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=78
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/78 (99%), Positives = 78/78 (100%), Gaps = 0/78 (0%)
Query 1 VKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
+KSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 AYKGRIVSFEPLSGPFTI 78
AYKGRIVSFEPLSGPFTI
Sbjct 61 AYKGRIVSFEPLSGPFTI 78
>gi|311744534|ref|ZP_07718334.1| methyltransferase FkbM [Aeromicrobium marinum DSM 15272]
gi|311312153|gb|EFQ82070.1| methyltransferase FkbM [Aeromicrobium marinum DSM 15272]
Length=248
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/214 (38%), Positives = 117/214 (55%), Gaps = 3/214 (1%)
Query 30 QFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDPLW 89
+ V+ L SR +D V D+GAN GQYA R A + GRI+S EPLSG + + +A+ D W
Sbjct 37 RLVRTLDSRGIDTVLDIGANVGQYATLTRSAGFGGRIISCEPLSGAYAEISRRAAHDDRW 96
Query 90 DCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSVAP 149
A+G GT TIN++ N+ SSS+ M +H +A P + ++ T+E + + +
Sbjct 97 TALNVAVGAEPGTATINVSENS-YSSSLRDMTSAHLDAAPQSRFIATEEVPVTTVTEIVT 155
Query 150 EFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLV 209
A LK+D QGFE +VL G I +QLELSF+ LY +L E + +
Sbjct 156 THGVDPSRALLKIDTQGFEGEVLRGAGDLI-GQVAAIQLELSFVELYADQLLFDELVAQM 214
Query 210 YSLGFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
+ G+ + L DA +GRMLQ DG+F R D
Sbjct 215 AADGYRIQQLETGISDA-SGRMLQVDGLFVRRAD 247
>gi|291303745|ref|YP_003515023.1| methyltransferase FkbM family [Stackebrandtia nassauensis DSM
44728]
gi|290572965|gb|ADD45930.1| methyltransferase FkbM family [Stackebrandtia nassauensis DSM
44728]
Length=318
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/212 (37%), Positives = 111/212 (53%), Gaps = 9/212 (4%)
Query 35 LKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDPLWDCRQH 94
L+ RV+ VFDVGAN GQYA LR+ Y GRIVSFEP+ L + A DP W Q
Sbjct 107 LRHYRVNCVFDVGANVGQYAKNLRKFGYTGRIVSFEPVPHIAEKLRAAAEGDPDWQVHQC 166
Query 95 ALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGM 154
ALG G+VT+N+ G SS+L + N + + +HRLD++ E M
Sbjct 167 ALGREAGSVTMNVV--KGSMSSILGPTDFGSTRYKRFNNIDKVDVPVHRLDAIMDE--AM 222
Query 155 NGV----AFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVY 210
G+ +LK+D QG + + AG + VGMQ E++ + +YEG + EAL +
Sbjct 223 AGLDDPRPYLKLDTQGLDLEAFAGTGDRV-KQLVGMQSEVALMHIYEGMPGMMEALGVYT 281
Query 211 SLGFTLTGLLPCFIDANNGRMLQADGIFFRED 242
GF +TG+ P + R+L+ D + R +
Sbjct 282 EAGFEITGMYPVSREQTTKRVLEFDCVMARAE 313
>gi|302547620|ref|ZP_07299962.1| putative LigA [Streptomyces hygroscopicus ATCC 53653]
gi|302465238|gb|EFL28331.1| putative LigA [Streptomyces himastatinicus ATCC 53653]
Length=327
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/214 (36%), Positives = 110/214 (52%), Gaps = 5/214 (2%)
Query 29 HQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDPL 88
H L+ V+ VFDVGAN+GQY LR+ Y GRIVSFEP F LE A DP
Sbjct 111 HHVAGLLEKYEVNCVFDVGANAGQYGRRLRQLGYTGRIVSFEPTEEAFGKLEKAAKDDPE 170
Query 89 WDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSVA 148
W ALG + T ++++ +S+L + + T+E I RLDSV
Sbjct 171 WWVFPFALGREEATQSMHV--GWATMNSLLGASDYGKERYRRFAKDRTEEIEIRRLDSVM 228
Query 149 PEFLG--MNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEAL 206
+ L + +LK+D QG++ +V AG I++ VG+Q E++ L LYEG + EA+
Sbjct 229 DKALAGLTDPRPYLKMDTQGYDLEVFAGAGERIEEF-VGLQSEVAVLRLYEGSPGMSEAV 287
Query 207 DLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
GF +TG+ P + GR+++ D + R
Sbjct 288 AAYEDSGFGITGMYPVTREDTTGRVVEFDCVMMR 321
>gi|26546923|gb|AAN05766.1| unknown [Mycobacterium avium]
Length=100
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/93 (60%), Positives = 70/93 (76%), Gaps = 0/93 (0%)
Query 4 LKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYK 63
L+ R IAR+ E R SER K FVKQL + +V+VVFDVGAN+GQY AGLR+A YK
Sbjct 4 LEQVRMIARNIPTEALRYLSERHWKRHFVKQLAAHQVNVVFDVGANTGQYTAGLRKAGYK 63
Query 64 GRIVSFEPLSGPFTILESKASTDPLWDCRQHAL 96
GRI+SFEPLS PF+ LE++A+ D LWDC ++A+
Sbjct 64 GRIISFEPLSQPFSRLENRAAKDALWDCSRYAI 96
>gi|94498710|ref|ZP_01305260.1| hypothetical protein SKA58_11615 [Sphingomonas sp. SKA58]
gi|94421809|gb|EAT06860.1| hypothetical protein SKA58_11615 [Sphingomonas sp. SKA58]
Length=248
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/212 (40%), Positives = 107/212 (51%), Gaps = 15/212 (7%)
Query 35 LKSRRVDVVFDVGANSGQYAAGLRR-AAYKGRIVSFEPLSGPFTILESKASTDPLWDCRQ 93
L S VD +FDVGAN GQYA RR A Y+G I+SFEP F +LE +A+ DP W
Sbjct 36 LTSFAVDCLFDVGANRGQYATMARRDAGYRGLILSFEPNPDIFALLEKRAAADPRWHVFN 95
Query 94 HALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYV-GTQEASIHRLDSVAPEFL 152
AL D DGT + NI A Q SS+ F N V T E RLD++ PE L
Sbjct 96 MALSDFDGTASFNIMA-ADQFSSLKKPSSVQDAIFADRNTVTKTVEMQCRRLDTLLPELL 154
Query 153 GMNGVA--FLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVY 210
+G A FLK+D QG + V G I +G+Q EL P+Y+GG +D +
Sbjct 155 AQHGFARPFLKMDTQGHDLSVCEGAGDQI-GRMLGVQTELGVRPIYDGGTGYRAMIDWLE 213
Query 211 SLGFTLTGLLPCFIDANNG----RMLQADGIF 238
+ F +P ANN +++ DGIF
Sbjct 214 ARDF-----MPSAFFANNKGHFPLLVEMDGIF 240
>gi|119474953|ref|ZP_01615306.1| hypothetical protein GP2143_14076 [marine gamma proteobacterium
HTCC2143]
gi|119451156|gb|EAW32389.1| hypothetical protein GP2143_14076 [marine gamma proteobacterium
HTCC2143]
Length=241
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/225 (32%), Positives = 111/225 (50%), Gaps = 14/225 (6%)
Query 4 LKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYK 63
+KL + IA++ +E+ +R + + ++D+V D GAN GQ+ LR A YK
Sbjct 1 MKLHKKIAKTFGYELIKRKKHPSSNTHLINLINEYKIDLVIDAGANVGQFGKMLRAAGYK 60
Query 64 GRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKS 123
I SFEP+S F L DP W ALG++ G + +NI SS+LP
Sbjct 61 EEIHSFEPISTTFIKLMEAIQPDPNWQAYPCALGEALGEIEVNIM-EGSDLSSILP---- 115
Query 124 HQNAFPPANY-----VGTQEASIHRLDSVAPEFLG--MNGVAFLKVDVQGFEKQVLAGGK 176
N F NY + T+ ++ +++ E + FLK+D QG++ V G
Sbjct 116 -PNEFGKENYKHIKVLDTETVTVRTVENFLTEDIKDCAQRRIFLKMDTQGYDLNVFKGAG 174
Query 177 STIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLP 221
+ D +G++ E+SF+P+YEG E+L + GF +TGL P
Sbjct 175 EKL-DFIIGIESEISFMPIYEGMPHYLESLKVYEDAGFVITGLYP 218
>gi|307133565|dbj|BAJ19055.1| putative methyltransferase [Streptomyces sp. SANK 62799]
Length=245
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/208 (35%), Positives = 107/208 (52%), Gaps = 5/208 (2%)
Query 33 KQLKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDPLWDCR 92
++L + +DVV D GAN GQYA +R+ ++G I SFEP S F +L A +D W C
Sbjct 26 RRLLLQDIDVVIDGGANGGQYAKWMRQCGFRGEIFSFEPASETFGVLAEAARSDDGWHCH 85
Query 93 QHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSVAPEFL 152
ALG DG V +++ SSV + H +P GT+ S+ L S+ E L
Sbjct 86 NVALGPQDGEVMLHLT-RTSLGSSVFRRTELHSRVWPKDVAAGTELVSMRSLRSLWHE-L 143
Query 153 GMNG-VAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYS 211
G +G +LK+DV+G E VL G +D + +++ELS + ++ E ++ + +
Sbjct 144 GCDGRRVYLKLDVEGAELSVLEGAGPVLDRIAL-LEVELSLVAMHHDAPTFREVVNFLSA 202
Query 212 LGFTLTGLLPCFI-DANNGRMLQADGIF 238
GF+ L D G+ML DGIF
Sbjct 203 QGFSAVALEQNHSGDDTTGQMLMIDGIF 230
>gi|270341303|dbj|BAI53084.1| putative O-methyltransferase [Streptomyces griseus]
Length=244
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/218 (34%), Positives = 108/218 (50%), Gaps = 5/218 (2%)
Query 23 SERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESK 82
SE + Q ++L + +DVV D GAN GQYA +R ++G I SFEP S F +L
Sbjct 16 SENLMTSQERRRLLLQDIDVVIDGGANGGQYAKWMRACGFRGEIFSFEPASETFGVLSEA 75
Query 83 ASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIH 142
A +D W C ALG DG +++ SS+ + H +P GT+ +
Sbjct 76 ARSDDRWHCHNAALGPEDGEARLHLT-RTSLGSSLFRRTELHSRVWPRDVEAGTELVPMR 134
Query 143 RLDSVAPEFLGMNG-VAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGML 201
L S+ E LG +G +LK+DV+G E VL G +D + ++LELS + ++ G
Sbjct 135 SLRSLWHE-LGCDGRRVYLKLDVEGAELSVLEGSGPVLDRIAL-LELELSLVDMHHGAPA 192
Query 202 IPEALDLVYSLGFTLTGLLPCFI-DANNGRMLQADGIF 238
E ++ + GF+ L D G+ML DGIF
Sbjct 193 FHEVINFLSGRGFSPVALEQNHNGDDTTGQMLMLDGIF 230
>gi|209967250|ref|YP_002300165.1| methyltransferase, FkbM family, putative [Rhodospirillum centenum
SW]
gi|209960716|gb|ACJ01353.1| methyltransferase, FkbM family, putative [Rhodospirillum centenum
SW]
Length=264
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/208 (36%), Positives = 113/208 (55%), Gaps = 12/208 (5%)
Query 35 LKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDPLWDCRQH 94
+++ V ++ DVGAN GQ++ +R RIV+FEPL+ P + P D +H
Sbjct 42 IRALPVGMLIDVGANVGQFSLLVRTLHPAARIVAFEPLAEPAARYGRLFADAPGVDLHRH 101
Query 95 ALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSV-APEFLG 153
ALG ++G TI+++ SSS+LP+ + F VG + + RLD+V +P L
Sbjct 102 ALGSAEGNATIHLSRRL-DSSSLLPISPVQEQTFAGTGEVGVRTVPVRRLDAVLSPASL- 159
Query 154 MNGVAFLKVDVQGFEKQVLAG---GKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVY 210
G LK+DVQGFE +V+ G G + ++ + E+SFLPLYEG L P + ++
Sbjct 160 -TGQVLLKLDVQGFELEVIRGFSVGLAAVEH----VYAEVSFLPLYEGQPLAPAIIADLH 214
Query 211 SLGFTLTGLLPCFIDANNGRMLQADGIF 238
+ GF L G+ D GR +QAD +F
Sbjct 215 ARGFDLAGVYNLSTD-REGRSVQADMLF 241
>gi|294011502|ref|YP_003544962.1| SAM-dependent methyltransferase [Sphingobium japonicum UT26S]
gi|292674832|dbj|BAI96350.1| SAM-dependent methyltransferase [Sphingobium japonicum UT26S]
Length=250
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/223 (37%), Positives = 106/223 (48%), Gaps = 19/223 (8%)
Query 29 HQFVKQLKSRR------VDVVFDVGANSGQYAAGLRR-AAYKGRIVSFEPLSGPFTILES 81
HQ+ + RR VD VFDVGAN GQYA LR A + G I+SFEP F+ LE
Sbjct 24 HQYPEIQALRRFLGAFAVDCVFDVGANRGQYATMLRSDAGFGGTILSFEPNPDIFSELER 83
Query 82 KASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVG-TQEAS 140
AS+D W AL D DG + NI A Q SS+ F N V T +
Sbjct 84 NASSDRRWHVFNMALSDFDGMASFNIMA-ADQFSSLKAPSGEQDAIFAERNRVTRTVDMQ 142
Query 141 IHRLDSVAPEFLGMNGVA--FLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEG 198
RL+S+ P+ +G A FLK+D QG + V G + D G+Q EL P+YEG
Sbjct 143 CRRLESLLPDLRRAHGFARPFLKMDTQGHDLSVCEGAGDALRD-MAGVQTELGVRPIYEG 201
Query 199 GMLIPEALDLVYSLGFTLTGLLPCFIDANNGR---MLQADGIF 238
G +D + GF + F N G +++ DGIF
Sbjct 202 GTGYRAMIDWLAEHGFVPS----AFFANNKGHFPLLVEMDGIF 240
>gi|257092580|ref|YP_003166221.1| FkbM family methyltransferase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257045104|gb|ACV34292.1| methyltransferase FkbM family [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length=241
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/220 (32%), Positives = 107/220 (49%), Gaps = 5/220 (2%)
Query 4 LKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYK 63
+KL +ARS +E+ RR L+ + +DVV DVGAN GQ+A LR ++
Sbjct 1 MKLLYSLARSLGYELIRRKKNPSLRAHLRNVIHRHAIDVVIDVGANDGQFALLLRSEGFR 60
Query 64 GRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKS 123
G I SFEP++ + L A D W+ ALG+ G IN+ ++ S + P
Sbjct 61 GTIYSFEPVNSTYEQLRRIAQHDANWEVFNTALGERVGDAIINVTASSDLCSLLDPN-DF 119
Query 124 HQNAFPPANYVGTQEASIHRLDS-VAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDH 182
+ AFP + ++ LD+ +A E L LK+D QG++ QV G + ++
Sbjct 120 GKTAFPSIAVSHQETIAMDTLDNFIAREKLAKAARILLKMDTQGYDLQVFQGAQQSLG-- 177
Query 183 CVGMQL-ELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLP 221
C+ L E+S +P+Y +AL L GF +GL P
Sbjct 178 CIVCLLSEISLMPIYAQAPHYLDALRLYEGKGFVPSGLYP 217
>gi|334344866|ref|YP_004553418.1| FkbM family methyltransferase [Sphingobium chlorophenolicum L-1]
gi|334101488|gb|AEG48912.1| methyltransferase FkbM family [Sphingobium chlorophenolicum L-1]
Length=250
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/206 (37%), Positives = 102/206 (50%), Gaps = 13/206 (6%)
Query 40 VDVVFDVGANSGQYAAGLRR-AAYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGD 98
VD VFDVGAN GQYA LR+ A ++G I+SFEP F LE +A++D W AL D
Sbjct 41 VDCVFDVGANRGQYATMLRKDAGFRGTILSFEPNPQVFAELERRAASDGKWHAFNMALSD 100
Query 99 SDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVG-TQEASIHRLDSVAPEFLGMNGV 157
DGT + NI A Q SS+ F N V T + RL+++ PE +
Sbjct 101 FDGTASFNIMA-ADQFSSLKKPSGEQDAIFADRNKVTHTVDMQCRRLENLLPELKAAHDF 159
Query 158 A--FLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFT 215
A FLK+D QG + V G + + + G+Q EL P+YEGG +D + F
Sbjct 160 ARPFLKMDTQGHDLSVCEGAGAVLSE-MAGVQTELGVRPIYEGGTGYRVMIDWLADHAFV 218
Query 216 LTGLLPCFIDANNGR---MLQADGIF 238
+ F N G +++ DGIF
Sbjct 219 PSA----FFANNKGHFPLLVEMDGIF 240
>gi|311746616|ref|ZP_07720401.1| methyltransferase [Algoriphagus sp. PR1]
gi|126578278|gb|EAZ82442.1| methyltransferase [Algoriphagus sp. PR1]
Length=244
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/220 (31%), Positives = 105/220 (48%), Gaps = 16/220 (7%)
Query 28 KHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDP 87
KH ++ + + + D+GAN GQ+AA R K +I SFEP+ F L ++ D
Sbjct 35 KHSWIVKY---NISTILDIGANKGQFAARFRILFPKAKIYSFEPIPEIFEHLCARFKLDE 91
Query 88 LWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSV 147
+ LG+ G + SSS PM H++ FP + + RLD V
Sbjct 92 NFKAFNLGLGNKSGKIDF-FQNEFSDSSSAFPMKGLHKSNFPKTIHEKQIRIDVERLDDV 150
Query 148 APEFLGMNGVAF-----LKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLI 202
MN ++F +K+DVQGFE+ V+ GG T+ + + +E+SF LYE +
Sbjct 151 ------MNDISFAQPLLIKIDVQGFEEMVILGGLKTLSKAEIVI-VEVSFFELYENQVYF 203
Query 203 PEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFRED 242
+ + SL F+ G I +G +LQAD IF R++
Sbjct 204 ETIYNHMKSLFFSFKGNFEQLISPIDGCVLQADAIFVRDN 243
>gi|345137144|dbj|BAK66753.1| hypothetical protein SLG_20780 [Sphingobium sp. SYK-6]
Length=257
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/227 (34%), Positives = 108/227 (48%), Gaps = 21/227 (9%)
Query 28 KHQFVKQLKSRR------VDVVFDVGANSGQYAAGLRR-AAYKGRIVSFEPLSGPFTILE 80
+HQ+ + + RR +D V DVGAN+GQYA LRR + G I+SFEP F LE
Sbjct 26 QHQYGEIVALRRFITHFGIDCVIDVGANAGQYATMLRRDVRFSGTILSFEPNPTVFAALE 85
Query 81 SKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVG-TQEA 139
A DP W AL D DG + NI A Q SS+ + F N V +
Sbjct 86 DTARRDPRWHVHNIALSDRDGEASFNIMA-ADQFSSLNAPDAGLEPIFAERNRVARSVRV 144
Query 140 SIHRLDSVAPEFLGMNGVA--FLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYE 197
RL+++ P+ G LK+D QG + V+AG + D G+Q EL+ PLYE
Sbjct 145 PCARLETILPDLPGARDAQAILLKMDTQGHDAVVMAGAAGVL-DRMSGVQTELAVRPLYE 203
Query 198 GGMLIPEALDLVYSLGFTLTGLLPCFIDANNG----RMLQADGIFFR 240
G + ++ GF +P + ANN +++ DG+F R
Sbjct 204 GATDYRAMIAVLADAGF-----VPNAMFANNKGHFPLLVELDGLFVR 245
>gi|319760824|ref|YP_004124761.1| methyltransferase fkbm family [Alicycliphilus denitrificans BC]
gi|330822731|ref|YP_004386034.1| methyltransferase FkbM family [Alicycliphilus denitrificans K601]
gi|317115385|gb|ADU97873.1| methyltransferase FkbM family [Alicycliphilus denitrificans BC]
gi|329308103|gb|AEB82518.1| methyltransferase FkbM family [Alicycliphilus denitrificans K601]
Length=236
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/223 (33%), Positives = 111/223 (50%), Gaps = 10/223 (4%)
Query 6 LARFIARSAAFEV-SRRYSERDLKHQFVK-QLKSRRVDVVFDVGANSGQYAAGLRRAAYK 63
L + +A A +V S YS + +F+ LK + V D+GAN G Y LRR +
Sbjct 4 LIKALAHRAGLDVMSLAYSRDYIYDRFLPGALKGHGIQAVIDIGANIGGYGELLRRVGFA 63
Query 64 GRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKS 123
G I SFEP S PF L KA+ DP W Q A D GT I+ + + +S L + +S
Sbjct 64 GDIHSFEPCSQPFGELARKAAGDPRWHVYQKAASDRSGTAQIHTMVGS-ELNSFLSLRES 122
Query 124 HQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHC 183
+ GT++ LD + F+K+D QG + +V++GG++ +
Sbjct 123 SRK----MTETGTEDVETVTLDGLDLPIDWSR--TFVKIDTQGHDVKVMSGGRNVLRQAA 176
Query 184 VGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDA 226
+ +Q E+SFLP+Y+G EA+ + LGF + G+ P D+
Sbjct 177 L-IQSEVSFLPIYQGMPAFDEAIASLKELGFDVIGMFPVSRDS 218
>gi|77165008|ref|YP_343533.1| methyltransferase FkbM [Nitrosococcus oceani ATCC 19707]
gi|254434095|ref|ZP_05047603.1| methyltransferase, FkbM family protein [Nitrosococcus oceani
AFC27]
gi|76883322|gb|ABA58003.1| Methyltransferase FkbM [Nitrosococcus oceani ATCC 19707]
gi|207090428|gb|EDZ67699.1| methyltransferase, FkbM family protein [Nitrosococcus oceani
AFC27]
Length=237
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/215 (36%), Positives = 106/215 (50%), Gaps = 11/215 (5%)
Query 30 QFVKQLKSR-RVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDPL 88
+ V+ LKS + V D+GAN GQ+A R RIVSFEPL GP + D
Sbjct 21 EHVRALKSLGEMGTVVDIGANRGQFALAARHCFPGARIVSFEPLPGPAEKFRRVLAGDSR 80
Query 89 WDCRQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSVA 148
Q A+G + G TI+I+ A SSS+LP+ ++ FP VGT + L
Sbjct 81 LVLHQVAIGPARGEETIHISA-ADDSSSLLPITGMQRSLFPGTGEVGTAVVQVAPLS--- 136
Query 149 PEFLGMNGV---AFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEA 205
EFL + A LK+DVQG+E + L G ++ + + E SF LYEG L E
Sbjct 137 -EFLPAEEIEPPALLKLDVQGYELEALKGCEALLSRFST-VYAECSFAELYEGQALTDEV 194
Query 206 LDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
+ + GF L+G+ D GR +QAD +F R
Sbjct 195 IAWLRDRGFRLSGVYHMSYD-GKGRAIQADFLFTR 228
>gi|170077759|ref|YP_001734397.1| methyltransferase, FkbM family protein [Synechococcus sp. PCC
7002]
gi|169885428|gb|ACA99141.1| methyltransferase, FkbM family protein [Synechococcus sp. PCC
7002]
Length=247
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/210 (30%), Positives = 108/210 (52%), Gaps = 3/210 (1%)
Query 35 LKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDPLWDCRQH 94
LK V+++ DVGAN GQ+A+ LR Y G I+SFEPLS + +L AS D W
Sbjct 35 LKEYEVNLILDVGANEGQFASVLRDIGYVGTIISFEPLSKEYRLLSQAASKDSNWYTYNL 94
Query 95 ALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSVAPEFL-G 153
ALG + ++++ + SS +L Q + + S+ RLD+ E +
Sbjct 95 ALGKQNKEQILHVSDKSTFSSFLLSNSLCEQRFGKESIGDKNEVVSVRRLDNFLVEVVKN 154
Query 154 MNGV-AFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYSL 212
++ + +LK+D QG++ +V +G T+ + V +Q E+S +P+Y + ++ L
Sbjct 155 IDKMRIYLKMDTQGYDLEVFSGA-GTLLKNIVALQSEVSVVPIYHSMPDMLYSISLFQEA 213
Query 213 GFTLTGLLPCFIDANNGRMLQADGIFFRED 242
GF+L+G+ P ++++ D + + D
Sbjct 214 GFSLSGMYPVTYVKPTLQVIEFDCLMVKAD 243
>gi|332525295|ref|ZP_08401464.1| methyltransferase FkbM family protein [Rubrivivax benzoatilyticus
JA2]
gi|332108573|gb|EGJ09797.1| methyltransferase FkbM family protein [Rubrivivax benzoatilyticus
JA2]
Length=239
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/211 (33%), Positives = 105/211 (50%), Gaps = 8/211 (3%)
Query 35 LKSRRVDVVFDVGANSGQYAAGLR-RAAYKGRIVSFEPLSGPFTILESKASTDPLWDCRQ 93
L+ +VD+V DVGAN+GQY LR A Y+G +VSFEP L ++A+ DP W
Sbjct 35 LRHHQVDLVLDVGANAGQYHDFLRLEAGYEGEVVSFEPQPDLAERLNARAAADPRWKVHH 94
Query 94 HALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYV-GTQEASIHRLDSVAPEFL 152
ALG +D + +N+ + G+ SS L + Q F N V T + RLD++ L
Sbjct 95 LALGSADAELALNVM-HRGEFSSFLQPDNTGQPQFADLNRVRQTVAVPVKRLDAIE---L 150
Query 153 GMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYSL 212
+ FLK D QGF+ +V+ G + V +Q E+ P+Y+G + L + L
Sbjct 151 PASDRLFLKADTQGFDLEVIRGASGILPRVKV-IQTEVCVQPIYKGMPRYRDVLAELEGL 209
Query 213 GFTLTGLLPCFIDANNGRMLQADGIFFREDD 243
GF+ G A+ ++ D + R +D
Sbjct 210 GFSPAGFFAVSRSADMA-AIEFDCLLVRRED 239
>gi|124515961|gb|EAY57470.1| Methyltransferase, FkbM family [Leptospirillum rubarum]
Length=262
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/208 (35%), Positives = 102/208 (50%), Gaps = 9/208 (4%)
Query 19 SRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRR-AAYKGRIVSFEPLSGPFT 77
S R+ L L D V D+GAN GQYA LR+ Y+G I SFEP+ +
Sbjct 23 SWRWKTLPLATHTRDLLAQTGCDCVLDIGANKGQYARFLRKHVGYEGPIFSFEPVRPLYE 82
Query 78 ILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQS-SSVLPMLKSHQNAFPPANY-VG 135
IL + DPLW ALG G ++I AG++ +S LP L S N V
Sbjct 83 ILLDHSKKDPLWKVFPFALGAKAGKEMLHI--TAGETMNSFLPPLSSGIAFLDEINVPVR 140
Query 136 TQEASIHRLDSV--APEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFL 193
++ S+ +D V A E G + + FLK+D QGF+ +VL G ++ +Q E+S +
Sbjct 141 SEAVSVRTVDDVLEAQEMSGFSSI-FLKMDTQGFDGEVLKGASGSL-PRIAALQSEVSCI 198
Query 194 PLYEGGMLIPEALDLVYSLGFTLTGLLP 221
P+YE +L GF++TG+ P
Sbjct 199 PIYENMTDWLTSLKNFDEQGFSVTGMFP 226
>gi|206601978|gb|EDZ38460.1| Methyltransferase, FkbM family [Leptospirillum sp. Group II '5-way
CG']
Length=262
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/208 (34%), Positives = 100/208 (49%), Gaps = 9/208 (4%)
Query 19 SRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLR-RAAYKGRIVSFEPLSGPFT 77
S R+ L L R D V DVGAN GQYA LR Y G I SFEP+ +
Sbjct 23 SWRWKALPLATHTRDLLTQIRCDCVLDVGANKGQYARFLRTHVRYGGPIFSFEPVRALYE 82
Query 78 ILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQS-SSVLPMLKSHQNAFPPANY-VG 135
IL ++ DPLW ALG G ++I AG++ +S LP L + N V
Sbjct 83 ILLDQSQKDPLWKVFPFALGAKTGEKNLHIM--AGETMNSFLPPLSTGIAFLDEINIPVR 140
Query 136 TQEASIHRLDSV--APEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFL 193
++ S+ +D E G + + FLK+D QGF+ +VL G ++ +Q E+S +
Sbjct 141 SEAVSVRTVDDFLKTKEMSGFSSI-FLKMDTQGFDGEVLKGASCSL-PRIAALQSEVSCI 198
Query 194 PLYEGGMLIPEALDLVYSLGFTLTGLLP 221
P+YE +L GF++TG+ P
Sbjct 199 PIYENMTDWLTSLKHFDQQGFSVTGMFP 226
>gi|189218559|ref|YP_001939200.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum
V4]
gi|189185417|gb|ACD82602.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum
V4]
Length=238
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/199 (34%), Positives = 97/199 (49%), Gaps = 8/199 (4%)
Query 42 VVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDG 101
V D+GAN GQ++ R K I +FEPL P I + DPL Q +G +
Sbjct 44 TVIDIGANRGQFSLAARHLFPKAAIYAFEPLPVPAAIFKKVFKDDPLVQLIQSGIGKTRE 103
Query 102 TVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLK 161
TI+I+ SSS LP+ ++ FP + ++E I L S+ + A LK
Sbjct 104 LRTIHIS-YKDDSSSFLPIGENQLRLFPGTGHKESKEVEIGPL-SLWITAESIKKPALLK 161
Query 162 VDVQGFEKQVLAGGKSTID--DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGL 219
+DVQGFE +VL G + +D D+ + +E SF LY G L E + ++S F L G+
Sbjct 162 IDVQGFELEVLKGSEELLDLFDY---IYVESSFCELYHGQALADEIIAFLFSRQFRLKGI 218
Query 220 LPCFIDANNGRMLQADGIF 238
F D G+ +Q D F
Sbjct 219 YNLFYD-KRGKPVQGDFFF 236
>gi|312115816|ref|YP_004013412.1| FkbM family methyltransferase [Rhodomicrobium vannielii ATCC
17100]
gi|311220945|gb|ADP72313.1| methyltransferase FkbM family [Rhodomicrobium vannielii ATCC
17100]
Length=251
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/221 (32%), Positives = 102/221 (47%), Gaps = 7/221 (3%)
Query 5 KLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLR-RAAYK 63
+ R R A + + YS + H + + VD+V DVGAN GQYA LR R YK
Sbjct 7 RAVRKAGRLAVVDTAYLYSRHEQVH-LKRIFREFDVDLVIDVGANRGQYATMLRQRVGYK 65
Query 64 GRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPML-- 121
G IVS EP+ L + DPLW LGD G +I ++ SS P
Sbjct 66 GAIVSVEPIPDLVEHLRHISRDDPLWYVEPVVLGDRHGPHRFHIMADSQCSSLNEPSFAE 125
Query 122 -KSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
+ + ++ + Q ++ L + +G FLK+D QG + +L+ T+
Sbjct 126 TDAFREQLAVSDSITVQGETLDSLFDRWSQKIGARN-PFLKLDTQGSDLAILSAAPDTLP 184
Query 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLP 221
+G Q ELS LYE + + EAL +LGF ++ L+P
Sbjct 185 K-LIGFQSELSIKRLYENTLPMEEALLKYKALGFDISALVP 224
>gi|170739387|ref|YP_001768042.1| FkbM family methyltransferase [Methylobacterium sp. 4-46]
gi|168193661|gb|ACA15608.1| methyltransferase FkbM family [Methylobacterium sp. 4-46]
Length=257
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/189 (34%), Positives = 95/189 (51%), Gaps = 12/189 (6%)
Query 40 VDVVFDVGANSGQYAAGLRR-AAYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGD 98
VD VFDVGAN GQ+A LRR Y+G I+SFEP+ L+++A+ DPLW Q AL D
Sbjct 49 VDCVFDVGANEGQFADMLRRKVGYRGPILSFEPIPDVAERLKARAAADPLWFVEQVALAD 108
Query 99 SDGTVTINIAGNAGQSSSVLPMLKSHQNA--FPPANY----VGTQEASIHRLDSVAPEFL 152
G T NI + SS P SH+ F N +G + +++ + + L
Sbjct 109 EIGERTFNIMADTQFSSLAKP---SHEEVKLFEGTNQILRSIGVKLSTVEFMLEKYRKEL 165
Query 153 GMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYSL 212
+LK+D QG + V+ G ++ VG+Q EL+ LY+ + +A+
Sbjct 166 KFTR-PYLKMDTQGHDLSVVRGAGDSLRGF-VGLQSELAIRKLYDTSVDFRDAITAYERA 223
Query 213 GFTLTGLLP 221
GF L+ +P
Sbjct 224 GFALSAFVP 232
>gi|85374467|ref|YP_458529.1| methyltransferase, FkbM family protein [Erythrobacter litoralis
HTCC2594]
gi|84787550|gb|ABC63732.1| methyltransferase, FkbM family protein [Erythrobacter litoralis
HTCC2594]
Length=242
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/202 (34%), Positives = 92/202 (46%), Gaps = 4/202 (1%)
Query 42 VVFDVGANSGQYAAGLRRAAY-KGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSD 100
V D+GA G+ A A+ + R+ FEP F LE A+ P ALGDS+
Sbjct 41 TVLDIGACGGELAERELLGAFPQARLHCFEPHPASFARLERVAARHPRIHAHHIALGDSE 100
Query 101 GTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSVAPE-FLGMNGVAF 159
V + + SSS+ + FP T S RLD A E + G
Sbjct 101 MMVDMQFNPGSPSSSSLRMQTAENVTLFPQVADTITTPVSQRRLDDWAREQGDALEGPLV 160
Query 160 LKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGL 219
+K+DVQGFE +V+AGG+ T+ G+ LE+ PLYEG D + SLGF G
Sbjct 161 VKMDVQGFEDRVIAGGQETL-RRADGIVLEVCLAPLYEGQPTFAALHDSLASLGFAFAGT 219
Query 220 LPCFIDANNGRMLQADGIFFRE 241
F G+++ D +F RE
Sbjct 220 RDQFF-GEGGKVIYLDAVFLRE 240
>gi|220935273|ref|YP_002514172.1| hypothetical protein Tgr7_2105 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219996583|gb|ACL73185.1| conserved hypothetical protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length=235
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/200 (34%), Positives = 91/200 (46%), Gaps = 4/200 (2%)
Query 43 VFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTD-PLWDCRQHALGDSDG 101
V DVGAN GQ+A + + FEPL PF L + A T C Q ALG+ +G
Sbjct 38 VIDVGANRGQFARLVSTFFPNAELYCFEPLEEPFRELNAWAETQGDRVHCFQFALGEQEG 97
Query 102 TVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSVAPEFLG-MNGVAFL 160
I++ SSS+L + +P + I LD V L M L
Sbjct 98 EAEIHLHEQHTPSSSLLSATDNCHRLYPQTRVERMERIRISTLDEVLKGSLDRMPREILL 157
Query 161 KVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLL 220
K+DVQGFE +VL GG + + C + LE+ PLY+G E L+ GF G L
Sbjct 158 KLDVQGFEDRVLRGGGNVL-SQCRAVLLEVCVDPLYQGQASFYELAHLLREQGFGYAGNL 216
Query 221 PCFIDANNGRMLQADGIFFR 240
A +GR++ D +F R
Sbjct 217 DQSYGA-DGRVVFLDAMFVR 235
>gi|220935263|ref|YP_002514162.1| methyltransferase FkbM [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219996573|gb|ACL73175.1| methyltransferase FkbM [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length=242
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/209 (34%), Positives = 103/209 (50%), Gaps = 10/209 (4%)
Query 32 VKQLKSRRVDVVFDVGANSGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDPLWDC 91
++QL + R V D+GAN GQ+A R A +I SFEPLS P + + ++D
Sbjct 39 LRQLGACRT--VVDIGANRGQFALAARAAFADAQIYSFEPLSAPASGYRATLASDVRVCL 96
Query 92 RQHALGDSDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSV--AP 149
+ A+G G I+++ SSS+LP+ FP +G S+ RL V A
Sbjct 97 LEAAVGPEKGEADIHLS-ERDDSSSLLPITGRQDELFPGTAEIGRGRISVVRLADVLSAE 155
Query 150 EFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLV 209
E + + LK+DVQGFE Q LAG + + + +E SF+ LY G E + +
Sbjct 156 EIVAPS---LLKLDVQGFELQALAGSEDLLPLFD-WVYVECSFVELYAGQAFADEVIAWL 211
Query 210 YSLGFTLTGLLPCFIDANNGRMLQADGIF 238
GF LTG+ D GR +QAD +F
Sbjct 212 RERGFRLTGVFNMSYD-RAGRAIQADFLF 239
Lambda K H
0.321 0.137 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 336904708980
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40