BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2968c
Length=210
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610105|ref|NP_217484.1| integral membrane protein [Mycobact... 409 2e-112
gi|254365605|ref|ZP_04981650.1| conserved integral membrane prot... 407 5e-112
gi|254821183|ref|ZP_05226184.1| hypothetical protein MintA_14697... 292 2e-77
gi|15827882|ref|NP_302145.1| integral membrane protein [Mycobact... 288 2e-76
gi|296171360|ref|ZP_06852716.1| integral membrane protein [Mycob... 284 7e-75
gi|342858213|ref|ZP_08714868.1| hypothetical protein MCOL_05046 ... 278 3e-73
gi|41409102|ref|NP_961938.1| hypothetical protein MAP3004c [Myco... 278 4e-73
gi|118617573|ref|YP_905905.1| integral membrane protein [Mycobac... 276 2e-72
gi|183981761|ref|YP_001850052.1| integral membrane protein [Myco... 276 2e-72
gi|254776236|ref|ZP_05217752.1| hypothetical protein MaviaA2_164... 275 2e-72
gi|118464317|ref|YP_882983.1| integral membrane protein [Mycobac... 275 3e-72
gi|126434510|ref|YP_001070201.1| vitamin K epoxide reductase [My... 273 1e-71
gi|240168972|ref|ZP_04747631.1| putative integral membrane prote... 272 2e-71
gi|108798910|ref|YP_639107.1| vitamin K epoxide reductase [Mycob... 272 3e-71
gi|145224780|ref|YP_001135458.1| vitamin K epoxide reductase [My... 265 3e-69
gi|339295804|gb|AEJ47915.1| integral membrane protein [Mycobacte... 261 4e-68
gi|118472216|ref|YP_886751.1| integral membrane protein [Mycobac... 253 2e-65
gi|120403156|ref|YP_952985.1| vitamin K epoxide reductase [Mycob... 249 2e-64
gi|11118648|gb|AAG30410.1|AF262949_1 hypothetical integral membr... 246 1e-63
gi|333991311|ref|YP_004523925.1| hypothetical protein JDM601_267... 229 1e-58
gi|169630349|ref|YP_001703998.1| hypothetical protein MAB_3268c ... 226 1e-57
gi|333921720|ref|YP_004495301.1| hypothetical protein AS9A_4067 ... 199 2e-49
gi|84496044|ref|ZP_00994898.1| probable conserved integral membr... 195 4e-48
gi|159035861|ref|YP_001535114.1| vitamin K epoxide reductase [Sa... 195 4e-48
gi|226349524|ref|YP_002776638.1| hypothetical membrane protein [... 191 6e-47
gi|326385105|ref|ZP_08206775.1| vitamin K epoxide reductase [Gor... 187 7e-46
gi|54027198|ref|YP_121440.1| hypothetical protein nfa52240 [Noca... 187 8e-46
gi|343928797|ref|ZP_08768237.1| hypothetical protein GOALK_125_0... 181 5e-44
gi|291302167|ref|YP_003513445.1| Vitamin K epoxide reductase [St... 181 6e-44
gi|134102134|ref|YP_001107795.1| vitamin K epoxide reductase [Sa... 179 3e-43
gi|330466686|ref|YP_004404429.1| vitamin K epoxide reductase [Ve... 179 3e-43
gi|260907521|ref|ZP_05915843.1| vitamin K epoxide reductase [Bre... 177 7e-43
gi|77454692|ref|YP_345560.1| hypothetical protein pREL1_0125 [Rh... 177 9e-43
gi|256826350|ref|YP_003150310.1| hypothetical protein Ksed_25850... 177 1e-42
gi|33867164|ref|NP_898722.1| hypothetical protein PBD2.107 [Rhod... 175 5e-42
gi|271966325|ref|YP_003340521.1| membrane protein [Streptosporan... 174 5e-42
gi|84496056|ref|ZP_00994910.1| hypothetical protein JNB_01015 [J... 174 1e-41
gi|145592740|ref|YP_001157037.1| vitamin K epoxide reductase [Sa... 173 2e-41
gi|260906582|ref|ZP_05914904.1| vitamin K epoxide reductase [Bre... 170 1e-40
gi|284043942|ref|YP_003394282.1| Vitamin K epoxide reductase [Co... 169 2e-40
gi|325000050|ref|ZP_08121162.1| membrane protein [Pseudonocardia... 166 2e-39
gi|262201509|ref|YP_003272717.1| Vitamin K epoxide reductase [Go... 166 3e-39
gi|152965175|ref|YP_001360959.1| vitamin K epoxide reductase [Ki... 164 1e-38
gi|326331478|ref|ZP_08197768.1| putative Membrane protein [Nocar... 162 2e-38
gi|284033328|ref|YP_003383259.1| Vitamin K epoxide reductase [Kr... 162 4e-38
gi|311894556|dbj|BAJ26964.1| hypothetical protein KSE_11300 [Kit... 159 2e-37
gi|296139923|ref|YP_003647166.1| Vitamin K epoxide reductase [Ts... 159 2e-37
gi|331698134|ref|YP_004334373.1| Vitamin K epoxide reductase [Ps... 149 2e-34
gi|111023983|ref|YP_706955.1| hypothetical protein RHA1_ro07031 ... 149 2e-34
gi|40445318|ref|NP_954778.1| integral membrane protein [Gordonia... 148 6e-34
>gi|15610105|ref|NP_217484.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15842521|ref|NP_337558.1| hypothetical protein MT3046 [Mycobacterium tuberculosis CDC1551]
gi|31794144|ref|NP_856637.1| integral membrane protein [Mycobacterium bovis AF2122/97]
62 more sequence titles
Length=210
Score = 409 bits (1050), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 209/210 (99%), Positives = 210/210 (100%), Gaps = 0/210 (0%)
Query 1 VVAARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVN 60
+VAARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVN
Sbjct 1 MVAARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVN 60
Query 61 PIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVG 120
PIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVG
Sbjct 61 PIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVG 120
Query 121 VAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLY 180
VAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLY
Sbjct 121 VAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLY 180
Query 181 QWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
QWRWSLATLWFTTVFLLIMVRFWDYWSTLI
Sbjct 181 QWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
>gi|254365605|ref|ZP_04981650.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|308232301|ref|ZP_07415596.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308369918|ref|ZP_07419507.2| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
15 more sequence titles
Length=209
Score = 407 bits (1046), Expect = 5e-112, Method: Compositional matrix adjust.
Identities = 208/209 (99%), Positives = 209/209 (100%), Gaps = 0/209 (0%)
Query 2 VAARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNP 61
+AARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNP
Sbjct 1 MAARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNP 60
Query 62 IVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGV 121
IVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGV
Sbjct 61 IVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGV 120
Query 122 AFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQ 181
AFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQ
Sbjct 121 AFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQ 180
Query 182 WRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
WRWSLATLWFTTVFLLIMVRFWDYWSTLI
Sbjct 181 WRWSLATLWFTTVFLLIMVRFWDYWSTLI 209
>gi|254821183|ref|ZP_05226184.1| hypothetical protein MintA_14697 [Mycobacterium intracellulare
ATCC 13950]
Length=210
Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/209 (70%), Positives = 166/209 (80%), Gaps = 3/209 (1%)
Query 2 VAARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNP 61
V+ A+ S DP VP PSAWW+LI G IGL ASMTLTVEK+ ILLDP YVPSCN+NP
Sbjct 5 VSTESADPSADPTPAPVPAPSAWWLLIAGAIGLVASMTLTVEKIDILLDPSYVPSCNINP 64
Query 62 IVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGV 121
I+SCGSVM TPQASLLGFPNPLLG+ FTVV+VTG+LA+ KV LP+WYW+GL G+L G
Sbjct 65 ILSCGSVMMTPQASLLGFPNPLLGLVAFTVVIVTGLLALTKVVLPQWYWLGLTAGVLAGA 124
Query 122 AFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQ 181
FVHWLIFQSLYRIGALCPYCMVVWAV +LLVVVASI + P + R + A ++YQ
Sbjct 125 VFVHWLIFQSLYRIGALCPYCMVVWAVTMSLLVVVASIAYRPALQARQAGP---AWVVYQ 181
Query 182 WRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
WRWS+A LWFT VFLL M RFWDYWSTL+
Sbjct 182 WRWSIAALWFTAVFLLCMARFWDYWSTLL 210
>gi|15827882|ref|NP_302145.1| integral membrane protein [Mycobacterium leprae TN]
gi|221230359|ref|YP_002503775.1| hypothetical protein MLBr_01666 [Mycobacterium leprae Br4923]
gi|3150219|emb|CAA19188.1| putative integral membrane protein [Mycobacterium leprae]
gi|13093435|emb|CAC30619.1| conserved integral membrane protein [Mycobacterium leprae]
gi|219933466|emb|CAR71761.1| conserved integral membrane protein [Mycobacterium leprae Br4923]
Length=214
Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/214 (72%), Positives = 178/214 (84%), Gaps = 5/214 (2%)
Query 2 VAARPAERSGD----PAAVR-VPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPS 56
++A+P ER GD PA+V +PVP+AWWVLI GVIGL ASM LTVEK+RILL+ YVPS
Sbjct 1 MSAQPVERPGDLKPAPASVLPMPVPTAWWVLIAGVIGLVASMMLTVEKIRILLNSAYVPS 60
Query 57 CNVNPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVG 116
CNVNPIV+CGSVM+TPQAS+LGFPNPLLGI GFT+V VTGVL+VA+V LP+WYWIGLAVG
Sbjct 61 CNVNPIVACGSVMSTPQASVLGFPNPLLGIVGFTLVTVTGVLSVAEVSLPQWYWIGLAVG 120
Query 117 ILVGVAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGA 176
L GV FVHWLIFQSLYRIGALC YCMV+WAV +LLVVV +IVF P+ E + A
Sbjct 121 TLAGVGFVHWLIFQSLYRIGALCAYCMVIWAVSVSLLVVVTAIVFRPLLEVLPGRTSAIA 180
Query 177 RLLYQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
R +YQWRWS+ATLWF TVFLLIMVRFW+YW TL+
Sbjct 181 RGIYQWRWSIATLWFITVFLLIMVRFWNYWQTLL 214
>gi|296171360|ref|ZP_06852716.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894191|gb|EFG73949.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=211
Score = 284 bits (726), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 146/210 (70%), Positives = 167/210 (80%), Gaps = 4/210 (1%)
Query 2 VAARPAERSGDP-AAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVN 60
V+A+ A+ + + RVP PSAWWVLI GVIGL AS TLTVEK+ +LLDP YVPSCN N
Sbjct 5 VSAQTADLTPESRPETRVPAPSAWWVLIAGVIGLVASATLTVEKIDLLLDPAYVPSCNFN 64
Query 61 PIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVG 120
PI+SCGSVM TPQASLLGFPNPLLG+ FTVVVVTG+LAV KV LP+WYWIGL G+++G
Sbjct 65 PILSCGSVMVTPQASLLGFPNPLLGLVAFTVVVVTGLLAVTKVGLPQWYWIGLTAGLVLG 124
Query 121 VAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLY 180
AFVHWLI++SLY IGALCPYCMVVWA TLLVVVASI P + RG R A +LY
Sbjct 125 AAFVHWLIYESLYSIGALCPYCMVVWAATITLLVVVASIACRPALQRRG---RGVAWVLY 181
Query 181 QWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
QWRWS+ LWFT VFL+IM RFWDYWSTL+
Sbjct 182 QWRWSITALWFTAVFLMIMARFWDYWSTLL 211
>gi|342858213|ref|ZP_08714868.1| hypothetical protein MCOL_05046 [Mycobacterium colombiense CECT
3035]
gi|342133917|gb|EGT87097.1| hypothetical protein MCOL_05046 [Mycobacterium colombiense CECT
3035]
Length=211
Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/210 (69%), Positives = 167/210 (80%), Gaps = 4/210 (1%)
Query 2 VAARPAERSGDPA-AVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVN 60
V+ A+ S D + A +VP SAWWVLI G+IGL ASMTLTVEK+ ILL+P YVPSCN+N
Sbjct 5 VSTAAADLSPDTSRAPQVPALSAWWVLIAGLIGLAASMTLTVEKIDILLNPSYVPSCNIN 64
Query 61 PIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVG 120
PI+SCGSVM TPQASL GFPNPLLG+ FTVVVVTG+LA+ KV LP+WYW+GL G+ VG
Sbjct 65 PILSCGSVMITPQASLFGFPNPLLGLVAFTVVVVTGLLALTKVTLPQWYWVGLTAGVAVG 124
Query 121 VAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLY 180
FVHWLIFQSLYRI ALCPYCMVVWAV +LLVVVASI + P ++R + A +L+
Sbjct 125 AVFVHWLIFQSLYRINALCPYCMVVWAVTMSLLVVVASIAWRPALQDRQTGP---AWVLF 181
Query 181 QWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
QWRWS+A LWFT VFLLIM RFWDYWS L+
Sbjct 182 QWRWSIAALWFTAVFLLIMARFWDYWSRLL 211
>gi|41409102|ref|NP_961938.1| hypothetical protein MAP3004c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397922|gb|AAS05552.1| hypothetical protein MAP_3004c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459140|gb|EGO38088.1| putative membrane protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=211
Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/199 (73%), Positives = 160/199 (81%), Gaps = 3/199 (1%)
Query 12 DPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTT 71
PA VP SAW VL+ GVIGL AS+TLT+EK+ ILLDP YVPSCN+NPI+SCGSVM T
Sbjct 16 SPAGPAVPALSAWSVLVAGVIGLVASVTLTLEKIDILLDPAYVPSCNINPILSCGSVMIT 75
Query 72 PQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQS 131
PQASLLGFPNPLLG+ FTVVVVTG+LAV KV LP+WYWIGLA G++VG FVHWLIFQS
Sbjct 76 PQASLLGFPNPLLGLVAFTVVVVTGLLAVTKVVLPQWYWIGLAAGLVVGAVFVHWLIFQS 135
Query 132 LYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWF 191
LYRIGALCPYCMVVW V LLVVVASI + P +R S LL+QWRWS+ LWF
Sbjct 136 LYRIGALCPYCMVVWVVTIALLVVVASIAYRPALGDRRSGP---GWLLFQWRWSIVALWF 192
Query 192 TTVFLLIMVRFWDYWSTLI 210
T VFLLIMVRFWDYWSTL+
Sbjct 193 TAVFLLIMVRFWDYWSTLL 211
>gi|118617573|ref|YP_905905.1| integral membrane protein [Mycobacterium ulcerans Agy99]
gi|118569683|gb|ABL04434.1| conserved integral membrane protein [Mycobacterium ulcerans Agy99]
Length=212
Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/215 (71%), Positives = 171/215 (80%), Gaps = 8/215 (3%)
Query 1 VVAARPAERSGDPAA-----VRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVP 55
+V+A AERS D + V VP+ SAWWVLI GV GL AS LTVEKVRIL DP YVP
Sbjct 1 MVSADSAERSSDLTSGAVRQVHVPMASAWWVLICGVTGLLASGALTVEKVRILFDPSYVP 60
Query 56 SCNVNPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAV 115
+CN+NPIVSCGSVMTT QASLLGFPN L GIA FTVVVVTGVLAV KVPLPRWYW+GL +
Sbjct 61 ACNINPIVSCGSVMTTAQASLLGFPNQLFGIAAFTVVVVTGVLAVTKVPLPRWYWVGLTI 120
Query 116 GILVGVAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVG 175
G+LVG FVHWLIF+SLYRIG+LCPYCMVVW + ATLLVVV SI F P ++ G
Sbjct 121 GVLVGTVFVHWLIFESLYRIGSLCPYCMVVWIITATLLVVVGSIAFRPDPDSTGGA---A 177
Query 176 ARLLYQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
R+L+QWRWS+ATLW T VFLLIMVRFW+YWSTL+
Sbjct 178 VRVLFQWRWSIATLWLTAVFLLIMVRFWNYWSTLL 212
>gi|183981761|ref|YP_001850052.1| integral membrane protein [Mycobacterium marinum M]
gi|183175087|gb|ACC40197.1| conserved integral membrane protein [Mycobacterium marinum M]
Length=212
Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/215 (72%), Positives = 171/215 (80%), Gaps = 8/215 (3%)
Query 1 VVAARPAERSGDPAA-----VRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVP 55
+V+A AERS D + V VP+ SAWWVLI GV GL AS LTVEKVRILLDP YVP
Sbjct 1 MVSADSAERSSDLTSGAVRQVHVPMLSAWWVLICGVTGLLASGALTVEKVRILLDPSYVP 60
Query 56 SCNVNPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAV 115
+CN+NPIVSCGSVMTT QASLLGFPN L GIA FTVVVVTGVLAV KVPLPRWYW+GL +
Sbjct 61 ACNINPIVSCGSVMTTAQASLLGFPNQLFGIAAFTVVVVTGVLAVTKVPLPRWYWVGLTI 120
Query 116 GILVGVAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVG 175
G+LVG FVHWLIF+SLYRIG+LCPYCMVVW + ATLLVVV SI F R + S
Sbjct 121 GVLVGTVFVHWLIFESLYRIGSLCPYCMVVWIITATLLVVVGSIAF---RPDPDSTSGAA 177
Query 176 ARLLYQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
R+L+QWRWS+ATLW T VFLLIMVRFW+YWSTL+
Sbjct 178 VRVLFQWRWSIATLWLTAVFLLIMVRFWNYWSTLL 212
>gi|254776236|ref|ZP_05217752.1| hypothetical protein MaviaA2_16408 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=211
Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/199 (72%), Positives = 159/199 (80%), Gaps = 3/199 (1%)
Query 12 DPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTT 71
PA VP SAW VL+ GVIGL AS+TLT+EK+ ILLDP YVPSCN+NPI+SCGSVM T
Sbjct 16 SPAGPAVPALSAWSVLVAGVIGLVASVTLTLEKIDILLDPAYVPSCNINPILSCGSVMIT 75
Query 72 PQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQS 131
PQASLLGFPNPLLG+ FTVVVVTG+LAV KV LP+WYW+GL G++VG FVHWLIFQS
Sbjct 76 PQASLLGFPNPLLGLVAFTVVVVTGLLAVTKVVLPQWYWMGLTAGLVVGAVFVHWLIFQS 135
Query 132 LYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWF 191
LYRIGALCPYCMVVW V LLVVVASI + P +R S LL+QWRWS+ LWF
Sbjct 136 LYRIGALCPYCMVVWVVTIALLVVVASIAYRPALGDRRSGP---GWLLFQWRWSIVALWF 192
Query 192 TTVFLLIMVRFWDYWSTLI 210
T VFLLIMVRFWDYWSTL+
Sbjct 193 TAVFLLIMVRFWDYWSTLL 211
>gi|118464317|ref|YP_882983.1| integral membrane protein [Mycobacterium avium 104]
gi|118165604|gb|ABK66501.1| conserved integral membrane protein [Mycobacterium avium 104]
Length=211
Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/199 (72%), Positives = 157/199 (79%), Gaps = 3/199 (1%)
Query 12 DPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTT 71
PA VP SAW VL+ GVIGL AS+TLT+EK+ ILLDP YVPSCN+NPI+SCGSVM T
Sbjct 16 SPAGPAVPALSAWSVLVAGVIGLVASVTLTLEKIDILLDPAYVPSCNINPILSCGSVMIT 75
Query 72 PQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQS 131
PQASLLGFPNPLLG+ FTVVVVTG+LAV KV LP+WYWIGL G++VG FVHWLIFQS
Sbjct 76 PQASLLGFPNPLLGLVAFTVVVVTGLLAVTKVVLPQWYWIGLTAGLVVGAVFVHWLIFQS 135
Query 132 LYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWF 191
LYRIGALCPYCMVVW V LLVVVASI + R G LL+QWRWS+ LWF
Sbjct 136 LYRIGALCPYCMVVWVVTIALLVVVASIAY---RPALGDSRSGPGWLLFQWRWSIVALWF 192
Query 192 TTVFLLIMVRFWDYWSTLI 210
T VFLLIMVRFWDYWSTL+
Sbjct 193 TAVFLLIMVRFWDYWSTLL 211
>gi|126434510|ref|YP_001070201.1| vitamin K epoxide reductase [Mycobacterium sp. JLS]
gi|126234310|gb|ABN97710.1| Vitamin K epoxide reductase [Mycobacterium sp. JLS]
Length=218
Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/207 (68%), Positives = 160/207 (78%), Gaps = 4/207 (1%)
Query 7 AERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCG 66
A +G A + VP PSA WVLI GV+G A+ TLT+EK+ +L+DP Y PSC++NP++SCG
Sbjct 13 ASPAGRTAGLAVPKPSAVWVLIAGVVGFVAAATLTIEKIELLIDPSYTPSCSLNPVLSCG 72
Query 67 SVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHW 126
SVM TPQA+L GFPNPL+GIA FTVV VTGVLAVA V LPRWYW GLAVG L+G FVHW
Sbjct 73 SVMVTPQAALFGFPNPLIGIAAFTVVTVTGVLAVAGVRLPRWYWSGLAVGTLLGTVFVHW 132
Query 127 LIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVG---ARLLYQWR 183
LIFQSLYRIGALCPYCMVVWAV LLVVV+SI P + G G AR+L+QWR
Sbjct 133 LIFQSLYRIGALCPYCMVVWAVTVPLLVVVSSIALRPAPAS-GEDAHSGNAVARVLHQWR 191
Query 184 WSLATLWFTTVFLLIMVRFWDYWSTLI 210
WSL LWFT V LLI+VRFWDYWSTL+
Sbjct 192 WSLTALWFTAVILLILVRFWDYWSTLV 218
>gi|240168972|ref|ZP_04747631.1| putative integral membrane protein [Mycobacterium kansasii ATCC
12478]
Length=208
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/211 (74%), Positives = 174/211 (83%), Gaps = 4/211 (1%)
Query 1 VVAARPAERSGDPAA-VRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNV 59
+V+A PA+ + DPA VRVP SAWWVLI G GL ASMTLTVEK+R+LLD YVPSCN+
Sbjct 1 MVSAEPADLTPDPAGGVRVPALSAWWVLIAGAFGLLASMTLTVEKIRVLLDRDYVPSCNL 60
Query 60 NPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILV 119
NPI+SCGSVM TPQA+LLG PNP++G+ GFTVVVVTGVLAV KVPLP WYWIGL VGILV
Sbjct 61 NPIMSCGSVMGTPQATLLGLPNPVVGVVGFTVVVVTGVLAVTKVPLPHWYWIGLTVGILV 120
Query 120 GVAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLL 179
G AFVHWLIFQSLYRIGALCPYCM+VW V TLLVV ASI F P+ E R S R+L
Sbjct 121 GTAFVHWLIFQSLYRIGALCPYCMLVWVVTITLLVVAASIAFRPVLERRDSAV---LRVL 177
Query 180 YQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
+QWRWS+ATLWFT VFL IM+RFW+YWSTLI
Sbjct 178 FQWRWSIATLWFTAVFLQIMIRFWNYWSTLI 208
>gi|108798910|ref|YP_639107.1| vitamin K epoxide reductase [Mycobacterium sp. MCS]
gi|119868025|ref|YP_937977.1| vitamin K epoxide reductase [Mycobacterium sp. KMS]
gi|108769329|gb|ABG08051.1| Vitamin K epoxide reductase [Mycobacterium sp. MCS]
gi|119694114|gb|ABL91187.1| Vitamin K epoxide reductase [Mycobacterium sp. KMS]
Length=218
Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/206 (67%), Positives = 158/206 (77%), Gaps = 2/206 (0%)
Query 7 AERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCG 66
A +G A + VP PSA WVLI GV+G A+ TLT+EK+ +L+DP Y PSC++NP++SCG
Sbjct 13 ASPAGRTAGLAVPKPSAVWVLIAGVVGFVAAATLTIEKIELLIDPSYTPSCSLNPVLSCG 72
Query 67 SVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHW 126
SVM TPQA+L GFPNPL+GIA FTVV VTGVLAVA V LPRWYW GLAVG L+G FVHW
Sbjct 73 SVMVTPQAALFGFPNPLIGIAAFTVVTVTGVLAVAGVRLPRWYWSGLAVGTLLGTVFVHW 132
Query 127 LIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGA--RLLYQWRW 184
LIFQSLYRIGALCPYCMVVWAV LLVVV+SI P + A R+L+QWRW
Sbjct 133 LIFQSLYRIGALCPYCMVVWAVTVPLLVVVSSIALRPAPASGDDAHSGNAVTRVLHQWRW 192
Query 185 SLATLWFTTVFLLIMVRFWDYWSTLI 210
SL LWFT V LLI+VRFWDYWSTL+
Sbjct 193 SLTALWFTAVILLILVRFWDYWSTLV 218
>gi|145224780|ref|YP_001135458.1| vitamin K epoxide reductase [Mycobacterium gilvum PYR-GCK]
gi|315445110|ref|YP_004077989.1| hypothetical protein Mspyr1_35440 [Mycobacterium sp. Spyr1]
gi|145217266|gb|ABP46670.1| Vitamin K epoxide reductase [Mycobacterium gilvum PYR-GCK]
gi|315263413|gb|ADU00155.1| predicted membrane protein [Mycobacterium sp. Spyr1]
Length=211
Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/214 (65%), Positives = 158/214 (74%), Gaps = 10/214 (4%)
Query 2 VAARPAERSGDPAA-----VRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPS 56
V A + DP+A V V SA WVLI GV+GL A++TLTVEK+ +L+DP Y+PS
Sbjct 3 VTATDSVDHADPSADEATGVAVARGSALWVLIAGVVGLAAALTLTVEKIELLIDPDYIPS 62
Query 57 CNVNPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVG 116
C++NP++SCGSVM TPQASL GFPNPL+GI FTVVVVTGVLA+AKV LPRWYW GLAV
Sbjct 63 CSINPVLSCGSVMITPQASLFGFPNPLIGIVSFTVVVVTGVLALAKVSLPRWYWAGLAVA 122
Query 117 ILVGVAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGA 176
L+G FVHWLIFQSLYRIGALCPYCMVVWAV LLVV S+ R +
Sbjct 123 TLLGTVFVHWLIFQSLYRIGALCPYCMVVWAVTIPLLVVATSVAVQAQRSGNAA-----V 177
Query 177 RLLYQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
RL+Y WRWSL TLWFT V LLI+ RFW+YWSTLI
Sbjct 178 RLIYTWRWSLVTLWFTGVLLLILERFWNYWSTLI 211
>gi|339295804|gb|AEJ47915.1| integral membrane protein [Mycobacterium tuberculosis CCDC5079]
Length=196
Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/137 (99%), Positives = 137/137 (100%), Gaps = 0/137 (0%)
Query 1 VVAARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVN 60
+VAARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVN
Sbjct 1 MVAARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVN 60
Query 61 PIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVG 120
PIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVG
Sbjct 61 PIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVG 120
Query 121 VAFVHWLIFQSLYRIGA 137
VAFVHWLIFQSLYRIGA
Sbjct 121 VAFVHWLIFQSLYRIGA 137
>gi|118472216|ref|YP_886751.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118173503|gb|ABK74399.1| conserved integral membrane protein [Mycobacterium smegmatis
str. MC2 155]
Length=210
Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/211 (63%), Positives = 157/211 (75%), Gaps = 5/211 (2%)
Query 2 VAARPAERS--GDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNV 59
VAA +RS P + V PSA WVLI GV+GL AS+TLTVEK+ +L++P YVPSC++
Sbjct 3 VAASDTDRSVAEGPGGLVVGKPSAVWVLIAGVLGLAASLTLTVEKIELLINPDYVPSCSI 62
Query 60 NPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILV 119
NP++SCGSVM T QASL GFPNPL+GI F+VV+VTGVLAVA V LPRWYW GLA G +
Sbjct 63 NPVLSCGSVMVTWQASLFGFPNPLIGIVAFSVVLVTGVLAVAGVRLPRWYWAGLATGTAL 122
Query 120 GVAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLL 179
G FVHWLIFQSLYRIGALCPYCMVVWAV L VV A I +R G + ++
Sbjct 123 GAVFVHWLIFQSLYRIGALCPYCMVVWAVTIPLAVVTAVIA---LRARAGDADAGPGNIV 179
Query 180 YQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
+QWRWSL LWFT + LLI+VRFW+YWSTL+
Sbjct 180 HQWRWSLVALWFTALVLLILVRFWEYWSTLL 210
>gi|120403156|ref|YP_952985.1| vitamin K epoxide reductase [Mycobacterium vanbaalenii PYR-1]
gi|119955974|gb|ABM12979.1| Vitamin K epoxide reductase [Mycobacterium vanbaalenii PYR-1]
Length=211
Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/199 (69%), Positives = 156/199 (79%), Gaps = 5/199 (2%)
Query 12 DPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTT 71
+PA+V V SA WVLIGGVIGL A++TLT+EK+ +L+DP Y+P+C++NP++SCGSVM T
Sbjct 18 EPASVAVARGSALWVLIGGVIGLAAALTLTIEKIELLIDPDYIPTCSINPVLSCGSVMIT 77
Query 72 PQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQS 131
PQASL GFPNPLLGI F+VVVVTGVLAVAKV LPRWYW GL+VG L+G FVHWLIFQS
Sbjct 78 PQASLFGFPNPLLGIVAFSVVVVTGVLAVAKVNLPRWYWAGLSVGTLLGAVFVHWLIFQS 137
Query 132 LYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWF 191
LYRIGALCPYCMVVWAV LLVV ASI R R LY WRWSL TLWF
Sbjct 138 LYRIGALCPYCMVVWAVTIPLLVVTASIALQAPRSGSAV-----VRALYTWRWSLVTLWF 192
Query 192 TTVFLLIMVRFWDYWSTLI 210
T V LLI+ RFW+YWSTL+
Sbjct 193 TGVALLILERFWNYWSTLV 211
>gi|11118648|gb|AAG30410.1|AF262949_1 hypothetical integral membrane protein [Mycobacterium smegmatis]
Length=187
Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/190 (66%), Positives = 148/190 (78%), Gaps = 3/190 (1%)
Query 21 PSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFP 80
PSA WVLI GV+GL AS+TLTVEK+ +L++P YVPSC++NP++SCGSVM T QASL GFP
Sbjct 1 PSAVWVLIAGVLGLAASLTLTVEKIELLINPDYVPSCSINPVLSCGSVMVTWQASLFGFP 60
Query 81 NPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCP 140
NPL+GI F+VV+VTGVLAVA V LPRWYW GLA G +G FVHWLIFQSLYRIGALCP
Sbjct 61 NPLIGIVAFSVVLVTGVLAVAGVRLPRWYWAGLATGTALGAVFVHWLIFQSLYRIGALCP 120
Query 141 YCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWFTTVFLLIMV 200
YCMVVWAV L VV A I +R G + +++QWRWSL LWFT + LLI+V
Sbjct 121 YCMVVWAVTIPLAVVTAVIA---LRARAGDADAGPGNIVHQWRWSLVALWFTALVLLILV 177
Query 201 RFWDYWSTLI 210
RFW+YWSTL+
Sbjct 178 RFWEYWSTLL 187
>gi|333991311|ref|YP_004523925.1| hypothetical protein JDM601_2671 [Mycobacterium sp. JDM601]
gi|333487279|gb|AEF36671.1| integral membrane protein [Mycobacterium sp. JDM601]
Length=205
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/208 (64%), Positives = 152/208 (74%), Gaps = 7/208 (3%)
Query 4 ARPAERSGDPAAVRVPVPS-AWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPI 62
A P E PA P S AW LI GVIGL AS+TLTVEK+R+L D YVPSCN+NP+
Sbjct 4 AAPTESPAPPAPGTQPAASTAWLTLIAGVIGLAASVTLTVEKIRLLTDAAYVPSCNLNPV 63
Query 63 VSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVA 122
+SCG VM TPQAS+ GFPNPL+GI FTVVVVTGVLAVAKVPLP WYW+GLA+G L G
Sbjct 64 LSCGPVMATPQASVAGFPNPLMGIVAFTVVVVTGVLAVAKVPLPHWYWVGLAIGTLGGAG 123
Query 123 FVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQW 182
FVHWLIFQSLYRIGALCPYCMVVWAV LLV ++ P R ++ Q LL++W
Sbjct 124 FVHWLIFQSLYRIGALCPYCMVVWAVTMLLLVTFTALALRPGRIHKSLQ------LLHRW 177
Query 183 RWSLATLWFTTVFLLIMVRFWDYWSTLI 210
RW+L LWF +FLL+ +RF DYW TLI
Sbjct 178 RWTLIALWFIGLFLLVFIRFQDYWLTLI 205
>gi|169630349|ref|YP_001703998.1| hypothetical protein MAB_3268c [Mycobacterium abscessus ATCC
19977]
gi|169242316|emb|CAM63344.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=189
Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/170 (66%), Positives = 131/170 (78%), Gaps = 6/170 (3%)
Query 41 TVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAV 100
T+EK+ IL+DP YVPSC++NP++SCGSVMTT QAS GFPN L+GI FTVV+VTGVL+V
Sbjct 26 TIEKIEILIDPTYVPSCSLNPVISCGSVMTTEQASAFGFPNSLIGIVAFTVVLVTGVLSV 85
Query 101 AKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIV 160
A V LPRWYW GLA+G L+G FVHWLIFQSLYRIGALCPYCMVVW+V LLVV ASI
Sbjct 86 AGVQLPRWYWSGLAIGSLLGAVFVHWLIFQSLYRIGALCPYCMVVWSVTIPLLVVSASIA 145
Query 161 FGPMRENRGSQERVGARLLYQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
P+ +R AR+LYQWRWSL WF + L I+ RFWDYW TL+
Sbjct 146 LRPLGSHR------WARILYQWRWSLVVFWFVALVLAILERFWDYWITLV 189
>gi|333921720|ref|YP_004495301.1| hypothetical protein AS9A_4067 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483941|gb|AEF42501.1| Conserved integral membrane protein [Amycolicicoccus subflavus
DQS3-9A1]
Length=191
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/168 (60%), Positives = 122/168 (73%), Gaps = 4/168 (2%)
Query 43 EKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAK 102
E+ R+ ++P YVPSC++NPI+SCGSVMTT QAS+ GFPNPLLG+ F VV+ +GV+ +
Sbjct 28 ERFRLFVEPDYVPSCSINPIISCGSVMTTDQASVFGFPNPLLGLVAFAVVLTSGVVLIGG 87
Query 103 VPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFG 162
LPRWYW GLAVG +G+ FVHWLIFQSLYRIGALCPYCMVVWAV L VV V
Sbjct 88 ARLPRWYWGGLAVGCGLGLLFVHWLIFQSLYRIGALCPYCMVVWAVQLPLFVVALRHV-- 145
Query 163 PMRENRGSQERVGARLLYQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
R S+ R G LY+WRW+L LW+ + LLI+ RFWDYW TL+
Sbjct 146 -GRPGAASRSRFGGA-LYRWRWNLVALWYAGLVLLILERFWDYWRTLL 191
>gi|84496044|ref|ZP_00994898.1| probable conserved integral membrane protein [Janibacter sp.
HTCC2649]
gi|84382812|gb|EAP98693.1| probable conserved integral membrane protein [Janibacter sp.
HTCC2649]
Length=206
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/207 (47%), Positives = 136/207 (66%), Gaps = 9/207 (4%)
Query 6 PAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSC 65
P+ +P+A V +AW + I G+IGL A+ L VEK+ +L DP YVPSC++NP++SC
Sbjct 6 PSNAPDEPSA-NVGRGTAWALTITGLIGLVAAFVLLVEKIALLTDPTYVPSCSINPVLSC 64
Query 66 GSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVH 125
GS+M+T QA + GFPNP+LG+AGFT ++ GV+ +A+ LP W+W G+ G GV FVH
Sbjct 65 GSIMSTDQAEVFGFPNPILGVAGFTALLTIGVVLLARAALPGWFWWGIQAGTTFGVVFVH 124
Query 126 WLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERV--GARLLYQWR 183
WLIFQSLYRIGALCPYCM+VW V+ T V + R + R+ G R + +
Sbjct 125 WLIFQSLYRIGALCPYCMIVWVVVITAFVATTT------HNARSGRLRLPKGLRDVAHYG 178
Query 184 WSLATLWFTTVFLLIMVRFWDYWSTLI 210
++ T+W + LI ++FWDYW TL+
Sbjct 179 PTVVTVWLVAIAALITIQFWDYWQTLV 205
>gi|159035861|ref|YP_001535114.1| vitamin K epoxide reductase [Salinispora arenicola CNS-205]
gi|157914696|gb|ABV96123.1| Vitamin K epoxide reductase [Salinispora arenicola CNS-205]
Length=211
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/213 (48%), Positives = 134/213 (63%), Gaps = 14/213 (6%)
Query 3 AARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPI 62
A RPA D + +AW + +GG +GL A+ LTVEK+ +L DP YVP+C++NPI
Sbjct 6 AVRPATAPADGRFLNTV--TAWVLTVGGAVGLLAATILTVEKINLLADPGYVPTCSINPI 63
Query 63 VSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVA 122
+SCGSVM+T QA + G PNPLLGIAGF V G +A PRW+W+ L G+++GVA
Sbjct 64 LSCGSVMSTAQAEVFGIPNPLLGIAGFAAVTTMGAALLAGAQFPRWWWLALQGGVILGVA 123
Query 123 FVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQE------RVGA 176
FVHWLI+QSLYRIGALCPYCMVVWAV + ++ +R R S R GA
Sbjct 124 FVHWLIYQSLYRIGALCPYCMVVWAVTMPIF------LYTTLRTLRDSATTLPRTVRAGA 177
Query 177 RLLYQWRWSLATLWFTTVFLLIMVRFWDYWSTL 209
+ ++ + +W+ + I+ RFWDYWSTL
Sbjct 178 ERVARYHSLVLVVWYAVIVAAILHRFWDYWSTL 210
>gi|226349524|ref|YP_002776638.1| hypothetical membrane protein [Rhodococcus opacus B4]
gi|226245439|dbj|BAH55786.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=217
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/213 (49%), Positives = 135/213 (64%), Gaps = 23/213 (10%)
Query 12 DPAAVRVPVP------SAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSC 65
DP A R VP W +++ G +GL AS+ LT+EK +L DP Y PSC++NP++SC
Sbjct 14 DPPAPRSAVPFTGSRVVGWVLVVAGALGLTASLVLTIEKFSLLADPTYRPSCSINPVISC 73
Query 66 GSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVH 125
GSVM++PQA GFPNPLLGI GFTV + TGV+ + V LPRWYW+GLA G++ FVH
Sbjct 74 GSVMSSPQAEAFGFPNPLLGIIGFTVALTTGVVTLGGVRLPRWYWLGLAAGLIGAAVFVH 133
Query 126 WLIFQSLYRIGALCPYCMVVW-AVIATLLVVVASIVFGPMRENRGSQERVGARLLYQW-- 182
WLIFQSLYRIGALCPYCM+VW AV+ +L V+ + G+Q R R L +W
Sbjct 134 WLIFQSLYRIGALCPYCMLVWVAVVVSLWYVLL---------HTGAQTRSPGRRLRRWMA 184
Query 183 -----RWSLATLWFTTVFLLIMVRFWDYWSTLI 210
++ T+W + LI FW YW TL+
Sbjct 185 FAARNHTAVLTVWVLIIAALIAEAFWVYWRTLV 217
>gi|326385105|ref|ZP_08206775.1| vitamin K epoxide reductase [Gordonia neofelifaecis NRRL B-59395]
gi|326196190|gb|EGD53394.1| vitamin K epoxide reductase [Gordonia neofelifaecis NRRL B-59395]
Length=219
Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/192 (47%), Positives = 133/192 (70%), Gaps = 9/192 (4%)
Query 18 VPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLL 77
+ V ++W +L+ GV+G+ A++ LT++++++L+DP + P+C++NPI+SCGSVM T Q
Sbjct 36 ISVAASWTLLVCGVLGMAAAIALTLDRIQLLIDPTFTPACSINPIISCGSVMVTDQGKFF 95
Query 78 GFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGA 137
GFPNPLLG+ F V++VT VL++ +V LPRWYW+G A+G L+G FV +LIFQS+YRI A
Sbjct 96 GFPNPLLGLPAFAVILVTAVLSIGRVRLPRWYWVGQAIGALLGQIFVGYLIFQSIYRIHA 155
Query 138 LCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWFTTVFLL 197
LCPYCMVVW +I +L++ S R + R + +W W L +++ V L+
Sbjct 156 LCPYCMVVWTIIPIVLILSLS---------RALPDSGLGRSIREWLWILLPVYYVVVILM 206
Query 198 IMVRFWDYWSTL 209
V+FWDYW TL
Sbjct 207 GTVQFWDYWKTL 218
>gi|54027198|ref|YP_121440.1| hypothetical protein nfa52240 [Nocardia farcinica IFM 10152]
gi|54018706|dbj|BAD60076.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=188
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 107/195 (55%), Positives = 137/195 (71%), Gaps = 8/195 (4%)
Query 16 VRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQAS 75
+ P SAW +L+ G+ G AS+TLTVE+ ++ LDP Y PSC++NP++SCGSVM T QA+
Sbjct 2 IAAPPRSAWLLLVCGLAGWIASVTLTVERYKLFLDPDYRPSCSLNPVLSCGSVMVTDQAA 61
Query 76 LLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRI 135
+ GFPNPL+GIAGF+VVV VLAVA V LPRW W GL +G ++G FV WLIFQSLYRI
Sbjct 62 VFGFPNPLMGIAGFSVVVTLAVLAVAGVALPRWIWGGLWLGAVLGTVFVCWLIFQSLYRI 121
Query 136 GALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWFTTVF 195
ALCPYCMVVWAVI LL VV ++G G +L +WRW+L L++ V
Sbjct 122 NALCPYCMVVWAVITPLLAVVTDQLWGRASGPLG--------VLAEWRWTLVALFYAVVL 173
Query 196 LLIMVRFWDYWSTLI 210
LL+ +RF DYW +L+
Sbjct 174 LLVFLRFQDYWLSLV 188
>gi|343928797|ref|ZP_08768237.1| hypothetical protein GOALK_125_00080 [Gordonia alkanivorans NBRC
16433]
gi|343761298|dbj|GAA15163.1| hypothetical protein GOALK_125_00080 [Gordonia alkanivorans NBRC
16433]
Length=220
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/209 (52%), Positives = 130/209 (63%), Gaps = 10/209 (4%)
Query 5 RPAERSGDPAAVRVPVPSAWWVL-IGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIV 63
P +R+ AVR WVL +GG IG AS LTVE++ + +P YVPSCN NP++
Sbjct 17 DPDDRALLAEAVRSWTRIVAWVLSVGGAIGFVASFVLTVERIELFKNPDYVPSCNFNPVL 76
Query 64 SCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAF 123
SCGSVM PQA+L GFPNPLLGIAGF VV+ TGV +A L WYW GL VG+ + +AF
Sbjct 77 SCGSVMAKPQAALFGFPNPLLGIAGFAVVITTGVAILAGARLAGWYWAGLQVGVTLAMAF 136
Query 124 VHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGS--QERVGARLLYQ 181
+ WLI+ SLY IGALCPYCMVVWA ATL + VF +R S R GA L
Sbjct 137 ICWLIYSSLYSIGALCPYCMVVWA--ATLPI----FVFVSVRNLHASGLTSRSGAALAVA 190
Query 182 WRWSLA-TLWFTTVFLLIMVRFWDYWSTL 209
+L L V +LI +RFW YWS+L
Sbjct 191 RSHALILVLAVGLVIVLIAIRFWSYWSSL 219
>gi|291302167|ref|YP_003513445.1| Vitamin K epoxide reductase [Stackebrandtia nassauensis DSM 44728]
gi|290571387|gb|ADD44352.1| Vitamin K epoxide reductase [Stackebrandtia nassauensis DSM 44728]
Length=208
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/183 (51%), Positives = 120/183 (66%), Gaps = 3/183 (1%)
Query 28 IGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNPLLGIA 87
IGGVIGL AS L VEK+ +L DP Y PSC++NP++SCGSVM T QA L GFPNP +G+
Sbjct 29 IGGVIGLIASWALAVEKIAMLRDPDYTPSCSINPVLSCGSVMETAQAELFGFPNPFIGLM 88
Query 88 GFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYCMVVWA 147
F VV+ GVL +++V LPRW W G+ +G L+G F+ WL QSLY IGALCPYCMVVWA
Sbjct 89 SFPVVITVGVLVLSRVRLPRWIWWGMQLGTLLGAVFITWLFIQSLYSIGALCPYCMVVWA 148
Query 148 VIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWFTTVFLLIMVRFWDYWS 207
++ + + + V+ R N + LY W+ LW + +LIM+RFW YW
Sbjct 149 MV--MPIFWYTTVYNISRRNFSKTDGEVGDWLYL-HWAGLVLWVFVLLILIMIRFWSYWQ 205
Query 208 TLI 210
TL+
Sbjct 206 TLL 208
>gi|134102134|ref|YP_001107795.1| vitamin K epoxide reductase [Saccharopolyspora erythraea NRRL
2338]
gi|291007615|ref|ZP_06565588.1| vitamin K epoxide reductase [Saccharopolyspora erythraea NRRL
2338]
gi|133914757|emb|CAM04870.1| vitamin K epoxide reductase [Saccharopolyspora erythraea NRRL
2338]
Length=203
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/212 (46%), Positives = 129/212 (61%), Gaps = 11/212 (5%)
Query 1 VVAARPAERSGDPAAVRVPVPSA--WWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCN 58
+ A PA A V V W ++GG++GL AS L +EK+ L +P YVP+C+
Sbjct 1 MTATMPATTGTGSAGTPVQVQRGLGWLYVVGGLVGLAASFALVLEKLAKLANPGYVPTCS 60
Query 59 VNPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGIL 118
+NPI+SCGSVM +PQA+L GFPNPLLG+A F V+VV G +A P PRW+W+G +G
Sbjct 61 LNPIISCGSVMDSPQAALFGFPNPLLGVASFPVMVVFGAALLAGFPAPRWFWVGAQLGTT 120
Query 119 VGVAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARL 178
+GV FVHWLIFQSLY IGALCPYCMVVW V + P R + RV + +
Sbjct 121 LGVVFVHWLIFQSLYEIGALCPYCMVVWVVTIPMFWYTTLHNLRPGRVGE-ALARVHSVV 179
Query 179 LYQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
L +W+ + +L + FWDYW+TL+
Sbjct 180 L--------AVWYLAIVVLCLQAFWDYWTTLL 203
>gi|330466686|ref|YP_004404429.1| vitamin K epoxide reductase [Verrucosispora maris AB-18-032]
gi|328809657|gb|AEB43829.1| vitamin K epoxide reductase [Verrucosispora maris AB-18-032]
Length=206
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/211 (52%), Positives = 135/211 (64%), Gaps = 9/211 (4%)
Query 2 VAARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNP 61
+ A A R P A V +AW + +GG IGL A+ TLTVEK+ +L D YVP+C++NP
Sbjct 1 MTATVARRPETPQAGFVARVTAWVLAVGGGIGLLAAGTLTVEKINLLADADYVPTCSINP 60
Query 62 IVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGV 121
I+SCGSVMTTPQA+ G PNPLLGIAGF VV GVL +A+V LP W W+GL G GV
Sbjct 61 ILSCGSVMTTPQAAAFGIPNPLLGIAGFAVVTTLGVLLLARVRLPGWCWLGLQAGATFGV 120
Query 122 AFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVG-ARL-- 178
FVHWLI+QSLY I ALCPYCMVVW +V +A ++ +R R ARL
Sbjct 121 VFVHWLIYQSLYVISALCPYCMVVW------VVTIAIFLYTSLRNLGAVAPRSPLARLSG 174
Query 179 LYQWRWSLATLWFTTVFLLIMVRFWDYWSTL 209
L + + W+ + L I+VRFWDYWSTL
Sbjct 175 LTGYHSLILVAWYVLIMLAILVRFWDYWSTL 205
>gi|260907521|ref|ZP_05915843.1| vitamin K epoxide reductase [Brevibacterium linens BL2]
Length=208
Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/203 (46%), Positives = 127/203 (63%), Gaps = 5/203 (2%)
Query 8 ERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGS 67
E A V P A ++GG+IGL A++ L VEK+ + +P Y+PSCNVNP++SCGS
Sbjct 11 ETETQEAPVTSPHGLAALFVVGGLIGLIAAVVLLVEKMTLAANPDYIPSCNVNPVLSCGS 70
Query 68 VMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWL 127
VM TPQA+ G PNP++G+AGF +V GV A WYW + +G+ V FVHWL
Sbjct 71 VMATPQAAAFGVPNPIIGVAGFAIVAAIGVGLFAGGRYTAWYWATIQIGVTFAVIFVHWL 130
Query 128 IFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLA 187
I+QSLY IGALCPYCM VWAV + ++ +R Q+ + LL+++R ++
Sbjct 131 IYQSLYVIGALCPYCMAVWAVTIPIFWYTST---RNLRSLSKGQKWI--NLLHEYRGAIL 185
Query 188 TLWFTTVFLLIMVRFWDYWSTLI 210
T WF + +LI RFWDYWSTL+
Sbjct 186 TGWFLLIIVLIANRFWDYWSTLV 208
>gi|77454692|ref|YP_345560.1| hypothetical protein pREL1_0125 [Rhodococcus erythropolis PR4]
gi|229493315|ref|ZP_04387106.1| vitamin K epoxide reductase [Rhodococcus erythropolis SK121]
gi|77019692|dbj|BAE46068.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
gi|229319817|gb|EEN85647.1| vitamin K epoxide reductase [Rhodococcus erythropolis SK121]
Length=218
Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 98/193 (51%), Positives = 128/193 (67%), Gaps = 12/193 (6%)
Query 25 WVLIG-GVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNPL 83
W+L G GV+GL AS+ LT+EK R+L DP Y PSC++NP++SCGSVM++PQAS+ GFPN +
Sbjct 31 WILSGAGVLGLIASLILTIEKFRLLSDPSYRPSCSINPVLSCGSVMSSPQASVFGFPNSI 90
Query 84 LGIAGFTVVVVTGVLAV-AKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYC 142
LG+ FTV++ TG++ + AK LP+WYW L +G+ G VHWLIFQSLYRI ALCPYC
Sbjct 91 LGVVAFTVLLTTGIVTLSAKSGLPQWYWRSLVIGLFAGAVLVHWLIFQSLYRIQALCPYC 150
Query 143 MVVWAVIATLLVVVASIVFGPMRENRGSQE-----RVGARLLYQWRWSLATLWFTTVFLL 197
MVVW V T L AS+ + S+ VGA Q + T+W +V +
Sbjct 151 MVVWVVTITAL-WYASLHLCTRSASASSRPVTRIVTVGA----QNHTLVPTIWILSVASM 205
Query 198 IMVRFWDYWSTLI 210
I+ FW YWSTLI
Sbjct 206 ILSAFWTYWSTLI 218
>gi|256826350|ref|YP_003150310.1| hypothetical protein Ksed_25850 [Kytococcus sedentarius DSM 20547]
gi|256689743|gb|ACV07545.1| predicted membrane protein [Kytococcus sedentarius DSM 20547]
Length=183
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/188 (50%), Positives = 122/188 (65%), Gaps = 9/188 (4%)
Query 23 AWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNP 82
AW +L+ G +GL A+ L VEK R++ DP YVPSC+++P++SCGSVM+T QA + GFPNP
Sbjct 5 AWVLLVCGSVGLSAAFVLLVEKFRLVADPAYVPSCSISPLLSCGSVMSTAQAEVFGFPNP 64
Query 83 LLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYC 142
++G+AGF +V V +A LP WYWIGL VG +G FVHWLIFQSLYRIGALCPYC
Sbjct 65 VMGVAGFAALVTVAVTLLAGARLPSWYWIGLTVGTGLGTVFVHWLIFQSLYRIGALCPYC 124
Query 143 MVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWFTTVFLLIMVRF 202
MVVW V + LV V + R S+ + + ++ W + LI +RF
Sbjct 125 MVVWVVTVSALVAVLA---------RWSRAGALPPWVGGYASTIVVAWVLVIAALIAIRF 175
Query 203 WDYWSTLI 210
WDYW TL+
Sbjct 176 WDYWVTLL 183
>gi|33867164|ref|NP_898722.1| hypothetical protein PBD2.107 [Rhodococcus erythropolis]
gi|33668998|gb|AAP73992.1| conserved hypothetical protein [Rhodococcus erythropolis]
Length=196
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/193 (47%), Positives = 127/193 (66%), Gaps = 7/193 (3%)
Query 22 SAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPN 81
+ W ++ G +GL AS+ LT+EK+++L+DP Y PSC++NP++SCGSVM++PQAS+ GFPN
Sbjct 7 TGWILVTTGALGLAASLILTIEKIQLLVDPSYRPSCSINPVLSCGSVMSSPQASIFGFPN 66
Query 82 PLLGIAGFTVVVVTGVLA-VAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCP 140
+LGI GFTV++ TG++ VA LP+WYW + +G+ G VHWLIFQSLYRI ALCP
Sbjct 67 SILGIVGFTVLLTTGIVTLVATNALPQWYWRCIVIGLFAGAVLVHWLIFQSLYRIQALCP 126
Query 141 YCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLL---YQWRWSLATLWFTTVFLL 197
YCM+VW V T L +R + R R++ + + T+W +V +
Sbjct 127 YCMLVWVVTMTALWYAT---LHLCTRSRSASSRTVTRIVTVGTKNHTLVPTIWVLSVASM 183
Query 198 IMVRFWDYWSTLI 210
I+ FW YWSTL+
Sbjct 184 ILNAFWTYWSTLV 196
>gi|271966325|ref|YP_003340521.1| membrane protein [Streptosporangium roseum DSM 43021]
gi|270509500|gb|ACZ87778.1| membrane protein-like protein [Streptosporangium roseum DSM 43021]
Length=214
Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/213 (47%), Positives = 132/213 (62%), Gaps = 5/213 (2%)
Query 1 VVAARPAERSGDPAAVRVPVPSAWWVL-IGGVIGLFASMTLTVEKVRILLDPIYVPSCNV 59
V A RP + A + S +VL IGG +G+ A+ L VE++R+ DP YVP+C++
Sbjct 4 VKAHRPGAAAEADATQPIVTRSLPFVLAIGGSLGVLAAFLLMVERLRLAADPGYVPTCSI 63
Query 60 NPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILV 119
NPI+SCGSVM T QAS+ GFPNPL+GIA F+VV G +A +W+W GL +G +
Sbjct 64 NPILSCGSVMKTEQASVFGFPNPLIGIAAFSVVTTVGTALLAGARFRKWFWYGLQLGTVA 123
Query 120 GVAFVHWLIFQSLYRIGALCPYCMVVWAVIATLL--VVVASIVFGPMRENRGSQERVGAR 177
GV FVHWLIFQSLYRIGALCPYCMVVWAV + V +A++ G + G++
Sbjct 124 GVVFVHWLIFQSLYRIGALCPYCMVVWAVTIPIFWYVTLANLEAGRIPLPGGARRAAFWA 183
Query 178 LLYQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
Y + TLW + LI+ RFW YW TL+
Sbjct 184 ARYH--TVVLTLWMLAIVGLILQRFWYYWITLV 214
>gi|84496056|ref|ZP_00994910.1| hypothetical protein JNB_01015 [Janibacter sp. HTCC2649]
gi|84382824|gb|EAP98705.1| hypothetical protein JNB_01015 [Janibacter sp. HTCC2649]
Length=208
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/195 (47%), Positives = 120/195 (62%), Gaps = 18/195 (9%)
Query 22 SAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPN 81
+AW I G++GL A+ TL VEK+ +L DP YVPSC++NP++SCGSVM T QA+ GFPN
Sbjct 23 TAWAFTITGLVGLAAAFTLLVEKIALLKDPAYVPSCSINPVLSCGSVMNTEQAAAFGFPN 82
Query 82 PLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPY 141
P+LG+AGFT ++ GV+ + + LP W+W G+ G GV FVHWLIFQSLYRI ALCPY
Sbjct 83 PILGVAGFTALLTIGVVLLTRATLPGWFWWGIQAGTTFGVVFVHWLIFQSLYRIEALCPY 142
Query 142 CMVVWAVIATLL-------VVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWFTTV 194
CMVVW + + P ++ GS S+ T+W +
Sbjct 143 CMVVWIAVIAAFVAATAQNATSGRLPLPPPTKDIGSYAP-----------SVVTVWLVLI 191
Query 195 FLLIMVRFWDYWSTL 209
LI+V+FWDYW TL
Sbjct 192 AGLILVQFWDYWVTL 206
>gi|145592740|ref|YP_001157037.1| vitamin K epoxide reductase [Salinispora tropica CNB-440]
gi|145302077|gb|ABP52659.1| Vitamin K epoxide reductase [Salinispora tropica CNB-440]
Length=210
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/207 (51%), Positives = 135/207 (66%), Gaps = 12/207 (5%)
Query 6 PAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSC 65
PAER A +AW + IGG +GL A+ LTVEK+ +L DP YVP+C++NPI+SC
Sbjct 12 PAERHFLAAV------TAWVLTIGGAVGLLAAAALTVEKINLLADPGYVPTCSINPILSC 65
Query 66 GSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVH 125
GSVM TPQA++ GFPNPLLGIAGF VV GV +A LPRW W+GL G+ GV FVH
Sbjct 66 GSVMNTPQAAVFGFPNPLLGIAGFAVVTTLGVTLLATGHLPRWMWLGLQGGVTFGVVFVH 125
Query 126 WLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARL---LYQW 182
WLI+QSLY IGALCPYCMVVWAV + + +R+N + R R+ + ++
Sbjct 126 WLIYQSLYVIGALCPYCMVVWAVTIPIFLYTT---LQTLRDNTTALPRALRRVTERVARY 182
Query 183 RWSLATLWFTTVFLLIMVRFWDYWSTL 209
+ +W V ++I+ RFWDYWSTL
Sbjct 183 HSLVLVVWAAFVVVVILHRFWDYWSTL 209
>gi|260906582|ref|ZP_05914904.1| vitamin K epoxide reductase [Brevibacterium linens BL2]
Length=208
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/185 (50%), Positives = 120/185 (65%), Gaps = 7/185 (3%)
Query 27 LIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNPLLGI 86
+IGGVIGL A++ L VEK+ + +P Y+PSCNVNPI+SCGSVM TPQA+ G PNP++G+
Sbjct 30 VIGGVIGLIAAVVLLVEKMTLAANPDYIPSCNVNPILSCGSVMGTPQAAAFGVPNPIIGV 89
Query 87 AGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYCMVVW 146
AGF +VV G +A WYW + VG+ V FVHWLI+QSLY IGALCPYCM VW
Sbjct 90 AGFAIVVTIGAGLLAGGRYTAWYWGIIQVGLTFAVVFVHWLIYQSLYVIGALCPYCMAVW 149
Query 147 AVIATLLVVVASIVFGPMRENRG-SQERVGARLLYQWRWSLATLWFTTVFLLIMVRFWDY 205
A V + + R R S+ + L++++R + T WF + LI RFWDY
Sbjct 150 A------VTIPIFWYATTRNLRSFSKGQKWITLIHEYRGVILTGWFLLIVGLIANRFWDY 203
Query 206 WSTLI 210
W+TL+
Sbjct 204 WTTLV 208
>gi|284043942|ref|YP_003394282.1| Vitamin K epoxide reductase [Conexibacter woesei DSM 14684]
gi|283948163|gb|ADB50907.1| Vitamin K epoxide reductase [Conexibacter woesei DSM 14684]
Length=214
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 115/174 (67%), Gaps = 4/174 (2%)
Query 39 TLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVL 98
TLTVEK+R+L DP +VP+C++N ++SCGSVM++PQA G PNPLLGIAGF+ + GV
Sbjct 43 TLTVEKIRLLEDPTHVPACSINAVLSCGSVMSSPQAEAFGVPNPLLGIAGFSALAALGVA 102
Query 99 AVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYCMVVW--AVIATLLVVV 156
VA LPRW W+ + G+ + FVHWL FQS+YRI ALCPYCMVVW A++A + V +
Sbjct 103 LVAGARLPRWLWLAIQAGVTFALGFVHWLFFQSVYRIEALCPYCMVVWVAAIVAFVYVTL 162
Query 157 ASIVFGPMRENRGSQERVGARLLYQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
++ G + R RV A + + T+W V LLI V FWDYW TL+
Sbjct 163 RNLAEGALPTPRA--LRVPAAAAVRNHGVIVTVWLLAVGLLIGVAFWDYWRTLL 214
>gi|325000050|ref|ZP_08121162.1| membrane protein [Pseudonocardia sp. P1]
Length=213
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/175 (51%), Positives = 108/175 (62%), Gaps = 5/175 (2%)
Query 36 ASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVT 95
A+ TLTVE++ +LLDP Y PSC++NP++SCGSVM T QA+ GFPNPLLGI F VVV
Sbjct 44 AAFTLTVERIELLLDPGYTPSCSINPVLSCGSVMQTEQAAFFGFPNPLLGIGAFAVVVTV 103
Query 96 GVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYCMVVWAVIATLLVV 155
G +A V P W+W GL G +GV FVH+LI QSLY IGALCPYCMVVWAV +
Sbjct 104 GAALLAGVRFPAWWWAGLTAGAALGVVFVHYLIVQSLYEIGALCPYCMVVWAVTIPIFWY 163
Query 156 VASIVFGPMRENRGSQERVGARLLYQWRWSLATLWFTTVFLLIMVRFWDYWSTLI 210
A RG E L ++ LWF + L + RFW YWS+L+
Sbjct 164 SALAALDRSGAARGLYEG-----LRRYHAVPVVLWFLVIIGLALQRFWIYWSSLL 213
>gi|262201509|ref|YP_003272717.1| Vitamin K epoxide reductase [Gordonia bronchialis DSM 43247]
gi|262084856|gb|ACY20824.1| Vitamin K epoxide reductase [Gordonia bronchialis DSM 43247]
Length=212
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/204 (45%), Positives = 125/204 (62%), Gaps = 9/204 (4%)
Query 12 DPAAVRVPVPSAW-----WVL-IGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSC 65
D AA+ V +W W L +GG+I A+ TLT+E+ + +P YVPSC+ NP++SC
Sbjct 11 DEAAILAEVVGSWNRIVAWTLTVGGLISFVAAFTLTIERFELAENPKYVPSCSFNPVLSC 70
Query 66 GSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVH 125
GSVM TPQA++ GFPNP++GIA F V V G+ A W+W GL VG+ +G+ F+
Sbjct 71 GSVMATPQAAVFGFPNPMIGIAAFAVAVTFGLGLFAGARFAGWFWAGLQVGVTLGMVFIC 130
Query 126 WLIFQSLYRIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWS 185
WLI+QSLY IGALCPYCMVVWA++ + V V+ V S+ A LL +
Sbjct 131 WLIYQSLYEIGALCPYCMVVWAMMIPIFVFVS--VRNAHASGLTSRSSFVA-LLARNHAL 187
Query 186 LATLWFTTVFLLIMVRFWDYWSTL 209
+ T+W + L+ RFW YWS+L
Sbjct 188 IITVWVLVIIALVGQRFWSYWSSL 211
>gi|152965175|ref|YP_001360959.1| vitamin K epoxide reductase [Kineococcus radiotolerans SRS30216]
gi|151359692|gb|ABS02695.1| Vitamin K epoxide reductase [Kineococcus radiotolerans SRS30216]
Length=220
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/181 (50%), Positives = 117/181 (65%), Gaps = 12/181 (6%)
Query 36 ASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVT 95
A+ TLTVE++R+L DP YVPSC+ NP++SCGSVM T QA++ GFPNPLLGIA F V V
Sbjct 46 AAFTLTVERIRLLQDPAYVPSCSFNPVLSCGSVMQTEQAAVFGFPNPLLGIAAFAVSVTL 105
Query 96 GVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYCMVVWA-VIATLLV 154
GVL +++ LPRW G +GI +G+ FV WL+ QSLY I ALCPYC+VVWA VI T
Sbjct 106 GVLVLSRTALPRWVERGYLLGITLGMVFVGWLVVQSLYSIHALCPYCVVVWAVVIPTFWT 165
Query 155 VVASIVFGPMRENRG-----SQERVGARLLYQWRWSLATLWFTTVFLLIMVRFWDYWSTL 209
+A + +RG + R AR + +R L L + V ++ +FW YWSTL
Sbjct 166 HLADGL------DRGLVPVPAALRGAARTVVDYRGLLVVLSYAAVLAMVATKFWSYWSTL 219
Query 210 I 210
+
Sbjct 220 L 220
>gi|326331478|ref|ZP_08197768.1| putative Membrane protein [Nocardioidaceae bacterium Broad-1]
gi|325950734|gb|EGD42784.1| putative Membrane protein [Nocardioidaceae bacterium Broad-1]
Length=204
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/193 (46%), Positives = 119/193 (62%), Gaps = 16/193 (8%)
Query 26 VLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNPLLG 85
+LIGG++G A+ LT+EK+ +L D SC++NPI+SCGS+M T QA GFPNPL+G
Sbjct 20 LLIGGLVGFTAAFVLTLEKITLLSDAGSALSCDLNPILSCGSIMKTEQAEAFGFPNPLIG 79
Query 86 IAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYCMVV 145
+A F V+ TG +A RWYW+GL +G+ +G+AF+ WLIFQSLYRIGALCPYCMVV
Sbjct 80 VAAFPVLAATGAAVLAGARFARWYWLGLQLGVTLGIAFIGWLIFQSLYRIGALCPYCMVV 139
Query 146 WAVIATLLVVVASIVFGPMRENRGSQERVGARL----LYQWRWSLATLWFTTVFLLIMV- 200
WAV+ VF + S GAR+ + +W + L T LL++
Sbjct 140 WAVVLP--------VFWHVTVRNASAGVFGARIAGSRITRWAREWSVLVITVAVLLVIAL 191
Query 201 ---RFWDYWSTLI 210
+FW YW TL+
Sbjct 192 ITEQFWYYWRTLV 204
>gi|284033328|ref|YP_003383259.1| Vitamin K epoxide reductase [Kribbella flavida DSM 17836]
gi|283812621|gb|ADB34460.1| Vitamin K epoxide reductase [Kribbella flavida DSM 17836]
Length=199
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/137 (57%), Positives = 95/137 (70%), Gaps = 0/137 (0%)
Query 12 DPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTT 71
D A + P W + GG IG A+ LTVE+ +L DP Y PSC++N ++SCGSVM +
Sbjct 13 DSIADQPPAGLRWLLAGGGAIGFLAAFVLTVERFHLLTDPNYKPSCSINSVLSCGSVMMS 72
Query 72 PQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQS 131
QA+L GFPNPLLGIAGF +V GV+ +A V LPRW W+GL VG +HWLI+QS
Sbjct 73 DQAALFGFPNPLLGIAGFAIVTTLGVVLLAGVQLPRWIWLGLQVGATAAAVLIHWLIYQS 132
Query 132 LYRIGALCPYCMVVWAV 148
+Y IGALCPYCMVVWAV
Sbjct 133 IYSIGALCPYCMVVWAV 149
>gi|311894556|dbj|BAJ26964.1| hypothetical protein KSE_11300 [Kitasatospora setae KM-6054]
Length=201
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/203 (47%), Positives = 129/203 (64%), Gaps = 10/203 (4%)
Query 14 AAVRVPVPS----AWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVM 69
+A R PVP+ AW +L+ G+IGL AS LT++K+++L +P Y PSCN+NPI+SCGS+M
Sbjct 3 SATRTPVPASRGHAWTLLLTGLIGLAASAVLTLDKIKLLQNPAYQPSCNINPIISCGSIM 62
Query 70 TTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIF 129
T QA GFPNPL+G+A F + G +A RW+W+ L G L+G+ FV WLI
Sbjct 63 RTAQAEAFGFPNPLIGLAAFGALSAIGAGLLAGAAYRRWFWLSLQAGTLLGLGFVAWLID 122
Query 130 QSLYRIGALCPYCMVVWAVIATLL--VVVASIVFGPMRENRGSQERVGARLLYQWRWSLA 187
Q+LY IGALCPYCMVVWAV+ T V ++ G + + R A L +QW +
Sbjct 123 QALYEIGALCPYCMVVWAVVLTAFWSTTVHNLRTGLLPAP--APVRRLAALRHQWL--VP 178
Query 188 TLWFTTVFLLIMVRFWDYWSTLI 210
T + + LLI+ RFW YWSTL+
Sbjct 179 TAAYLVILLLILNRFWFYWSTLL 201
>gi|296139923|ref|YP_003647166.1| Vitamin K epoxide reductase [Tsukamurella paurometabola DSM 20162]
gi|296028057|gb|ADG78827.1| Vitamin K epoxide reductase [Tsukamurella paurometabola DSM 20162]
Length=198
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/195 (44%), Positives = 118/195 (61%), Gaps = 10/195 (5%)
Query 14 AAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQ 73
A V PS +++ G +GL AS LT++++++L DP + P C+++ ++SCGS+M + Q
Sbjct 12 ATVENRRPSGAVLIVTGALGLLASAMLTIDRIKLLQDPSFRPGCSIDGVLSCGSIMESAQ 71
Query 74 ASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLY 133
++ GFPNPLLG+ FTVV+VTGVL VPLPRWYW GLAVG G+ + +LI SLY
Sbjct 72 GAVFGFPNPLLGLVAFTVVIVTGVLTAGGVPLPRWYWTGLAVGSAAGLVLLMYLIHASLY 131
Query 134 RIGALCPYCMVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWFTT 193
I ALC +CM+VW V VV A G + E Q + G +L +W+
Sbjct 132 DIRALCLWCMLVWTVQP---VVTAVATAGALGERATLQVKQGLA-------ALVLVWYIV 181
Query 194 VFLLIMVRFWDYWST 208
V LI FWDYWS+
Sbjct 182 VITLIATAFWDYWSS 196
>gi|331698134|ref|YP_004334373.1| Vitamin K epoxide reductase [Pseudonocardia dioxanivorans CB1190]
gi|326952823|gb|AEA26520.1| Vitamin K epoxide reductase [Pseudonocardia dioxanivorans CB1190]
Length=207
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/129 (59%), Positives = 94/129 (73%), Gaps = 2/129 (1%)
Query 26 VLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNPLLG 85
+LIGG IGL AS+ LTVE+ R + D YVPSC++ +VSCGSVM + QAS+ GFPN ++G
Sbjct 28 LLIGGAIGLVASIVLTVERTRAVSDADYVPSCDLGAVVSCGSVMRSAQASMFGFPNSMIG 87
Query 86 IAGFTVVVVTG-VLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYCMV 144
IAGF +V+ TG VLA P P W+W+GL G G AFVH LIF +LYRIGA+CPYCMV
Sbjct 88 IAGFAIVLTTGAVLAAGARPRP-WFWMGLQAGAGFGAAFVHVLIFVTLYRIGAVCPYCMV 146
Query 145 VWAVIATLL 153
VW V T+
Sbjct 147 VWVVTMTIF 155
>gi|111023983|ref|YP_706955.1| hypothetical protein RHA1_ro07031 [Rhodococcus jostii RHA1]
gi|110823513|gb|ABG98797.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=218
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/146 (58%), Positives = 102/146 (70%), Gaps = 2/146 (1%)
Query 3 AARPAERSGDPAAVRVPVPSAWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPI 62
AA A +GD A +P W +L+GG++GL A+ LTVEK + D Y+PSC++N +
Sbjct 15 AAPFAGEAGDAAPFVRSLP--WLLLVGGLLGLVAAFALTVEKFALAADATYIPSCSINTV 72
Query 63 VSCGSVMTTPQASLLGFPNPLLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVA 122
V+CGSVM T QAS+ GFPN LLGIAGF VV TG +A RW+W+GL VG+ VA
Sbjct 73 VNCGSVMGTAQASVFGFPNSLLGIAGFAVVAATGAGLLAGARFARWFWLGLQVGVTAAVA 132
Query 123 FVHWLIFQSLYRIGALCPYCMVVWAV 148
FVHWLI QSLY IGALCPYCMVVWAV
Sbjct 133 FVHWLIVQSLYEIGALCPYCMVVWAV 158
>gi|40445318|ref|NP_954778.1| integral membrane protein [Gordonia westfalica]
gi|40217348|emb|CAE09099.1| putative integral membrane protein [Gordonia westfalica]
Length=190
Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/188 (47%), Positives = 112/188 (60%), Gaps = 4/188 (2%)
Query 23 AWWVLIGGVIGLFASMTLTVEKVRILLDPIYVPSCNVNPIVSCGSVMTTPQASLLGFPNP 82
AW + + G IGL A+ TLTVEK + DP Y P+C++NPIV+CGSVM TPQA + GFPN
Sbjct 7 AWILAVCGSIGLIAAFTLTVEKFELATDPAYTPTCSINPIVNCGSVMDTPQAVVFGFPNS 66
Query 83 LLGIAGFTVVVVTGVLAVAKVPLPRWYWIGLAVGILVGVAFVHWLIFQSLYRIGALCPYC 142
L+GIAGF+ ++ VL ++ P W IGL G+ V FVHWLIFQSLYRI ALCPYC
Sbjct 67 LIGIAGFSALIAVAVLMGSRP--PTWVMIGLQSGLTGAVVFVHWLIFQSLYRINALCPYC 124
Query 143 MVVWAVIATLLVVVASIVFGPMRENRGSQERVGARLLYQWRWSLATLWFTTVFLLIMVRF 202
M V V+ + S+ G+ R +L + +W V LI RF
Sbjct 125 MAV-WVVVVVAFWYVSLRNADHFCPPGTARRALDAILTV-HTVVPLVWVLAVIALIAHRF 182
Query 203 WDYWSTLI 210
W YWSTL+
Sbjct 183 WWYWSTLM 190
Lambda K H
0.329 0.142 0.480
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 245963417238
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40