BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2969c
Length=255
Score E
Sequences producing significant alignments: (Bits) Value
gi|560529|gb|AAA50950.1| u0002a [Mycobacterium tuberculosis] 514 5e-144
gi|15842522|ref|NP_337559.1| hypothetical protein MT3047 [Mycoba... 513 7e-144
gi|15610106|ref|NP_217485.1| hypothetical protein Rv2969c [Mycob... 511 3e-143
gi|340627958|ref|YP_004746410.1| hypothetical protein MCAN_29911... 506 1e-141
gi|118617572|ref|YP_905904.1| hypothetical protein MUL_1990 [Myc... 410 1e-112
gi|183981760|ref|YP_001850051.1| hypothetical protein MMAR_1747 ... 403 1e-110
gi|240168971|ref|ZP_04747630.1| hypothetical protein MkanA1_0664... 392 2e-107
gi|254821182|ref|ZP_05226183.1| hypothetical protein MintA_14692... 384 5e-105
gi|41409103|ref|NP_961939.1| hypothetical protein MAP3005c [Myco... 380 9e-104
gi|342858212|ref|ZP_08714867.1| hypothetical protein MCOL_05041 ... 380 2e-103
gi|296171359|ref|ZP_06852715.1| conserved hypothetical protein [... 370 1e-100
gi|333991312|ref|YP_004523926.1| hypothetical protein JDM601_267... 318 4e-85
gi|15827883|ref|NP_302146.1| hypothetical protein ML1667 [Mycoba... 317 1e-84
gi|3150218|emb|CAA19187.1| putative transmembrane protein [Mycob... 316 2e-84
gi|120403155|ref|YP_952984.1| hypothetical protein Mvan_2163 [My... 310 1e-82
gi|145224781|ref|YP_001135459.1| hypothetical protein Mflv_4202 ... 308 3e-82
gi|108798909|ref|YP_639106.1| hypothetical protein Mmcs_1941 [My... 289 2e-76
gi|118468714|ref|YP_886750.1| serine-threonine protein kinase [M... 284 8e-75
gi|169630350|ref|YP_001703999.1| hypothetical protein MAB_3269c ... 211 6e-53
gi|8439568|gb|AAF74995.1|AF143401_1 exported protein 996A160 [My... 134 1e-29
gi|326385104|ref|ZP_08206774.1| DSBA oxidoreductase [Gordonia ne... 127 2e-27
gi|262201206|ref|YP_003272414.1| DSBA oxidoreductase [Gordonia b... 110 3e-22
gi|54027197|ref|YP_121439.1| hypothetical protein nfa52230 [Noca... 102 6e-20
gi|323357350|ref|YP_004223746.1| protein-disulfide isomerase [Mi... 99.8 3e-19
gi|326385103|ref|ZP_08206773.1| DSBA oxidoreductase [Gordonia ne... 99.8 3e-19
gi|325675803|ref|ZP_08155487.1| non-specific serine/threonine pr... 96.3 4e-18
gi|312140575|ref|YP_004007911.1| hypothetical protein REQ_32310 ... 96.3 4e-18
gi|330466080|ref|YP_004403823.1| DSBA oxidoreductase [Verrucosis... 95.9 5e-18
gi|229490970|ref|ZP_04384803.1| serine/threonine-protein kinase ... 95.5 7e-18
gi|226305818|ref|YP_002765778.1| hypothetical protein RER_23310 ... 95.5 7e-18
gi|239916941|ref|YP_002956499.1| protein-disulfide isomerase [Mi... 95.1 9e-18
gi|289705219|ref|ZP_06501620.1| DSBA-like thioredoxin domain pro... 94.7 1e-17
gi|260906629|ref|ZP_05914951.1| DSBA oxidoreductase [Brevibacter... 94.0 2e-17
gi|333921721|ref|YP_004495302.1| DSBA oxidoreductase [Amycolicic... 94.0 2e-17
gi|54026424|ref|YP_120666.1| hypothetical protein nfa44510 [Noca... 93.6 2e-17
gi|258651909|ref|YP_003201065.1| protein-disulfide isomerase-lik... 92.0 7e-17
gi|291303225|ref|YP_003514503.1| protein-disulfide isomerase-lik... 91.3 1e-16
gi|50954364|ref|YP_061652.1| hypothetical protein Lxx05860 [Leif... 90.5 2e-16
gi|337765166|emb|CCB73875.1| putative integral membrane protein ... 89.0 7e-16
gi|317508204|ref|ZP_07965885.1| hypothetical protein HMPREF9336_... 89.0 7e-16
gi|88855735|ref|ZP_01130398.1| hypothetical protein A20C1_06541 ... 86.7 3e-15
gi|269796443|ref|YP_003315898.1| protein-disulfide isomerase [Sa... 86.7 4e-15
gi|226365882|ref|YP_002783665.1| hypothetical protein ROP_64730 ... 86.3 4e-15
gi|317508203|ref|ZP_07965884.1| DSBA thioredoxin domain-containi... 86.3 4e-15
gi|325962215|ref|YP_004240121.1| protein-disulfide isomerase [Ar... 85.9 5e-15
gi|111023378|ref|YP_706350.1| serine/threonine-protein kinase [R... 85.9 5e-15
gi|119962890|ref|YP_946723.1| DSBA-like thioredoxin domain-conta... 85.5 7e-15
gi|343928382|ref|ZP_08767831.1| hypothetical protein GOALK_116_0... 85.5 7e-15
gi|296394534|ref|YP_003659418.1| DSBA oxidoreductase [Segnilipar... 85.1 9e-15
gi|302865693|ref|YP_003834330.1| DSBA oxidoreductase [Micromonos... 84.0 2e-14
>gi|560529|gb|AAA50950.1| u0002a [Mycobacterium tuberculosis]
Length=299
Score = 514 bits (1324), Expect = 5e-144, Method: Compositional matrix adjust.
Identities = 255/255 (100%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA
Sbjct 45 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 104
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA
Sbjct 105 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 164
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA
Sbjct 165 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 224
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV
Sbjct 225 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 284
Query 241 GDVPGIDSAAATATS 255
GDVPGIDSAAATATS
Sbjct 285 GDVPGIDSAAATATS 299
>gi|15842522|ref|NP_337559.1| hypothetical protein MT3047 [Mycobacterium tuberculosis CDC1551]
gi|253797939|ref|YP_003030940.1| hypothetical protein TBMG_01001 [Mycobacterium tuberculosis KZN
1435]
gi|254233056|ref|ZP_04926383.1| hypothetical protein TBCG_02908 [Mycobacterium tuberculosis C]
20 more sequence titles
Length=261
Score = 513 bits (1322), Expect = 7e-144, Method: Compositional matrix adjust.
Identities = 255/255 (100%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA
Sbjct 7 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 66
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA
Sbjct 67 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 126
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA
Sbjct 127 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 186
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV
Sbjct 187 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 246
Query 241 GDVPGIDSAAATATS 255
GDVPGIDSAAATATS
Sbjct 247 GDVPGIDSAAATATS 261
>gi|15610106|ref|NP_217485.1| hypothetical protein Rv2969c [Mycobacterium tuberculosis H37Rv]
gi|31794145|ref|NP_856638.1| hypothetical protein Mb2993c [Mycobacterium bovis AF2122/97]
gi|121638850|ref|YP_979074.1| putative membrane or secreted protein [Mycobacterium bovis BCG
str. Pasteur 1173P2]
55 more sequence titles
Length=255
Score = 511 bits (1317), Expect = 3e-143, Method: Compositional matrix adjust.
Identities = 254/255 (99%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
+ADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA
Sbjct 1 MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA
Sbjct 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA
Sbjct 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV
Sbjct 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
Query 241 GDVPGIDSAAATATS 255
GDVPGIDSAAATATS
Sbjct 241 GDVPGIDSAAATATS 255
>gi|340627958|ref|YP_004746410.1| hypothetical protein MCAN_29911 [Mycobacterium canettii CIPT
140010059]
gi|340006148|emb|CCC45322.1| putative conserved membrane or secreted protein [Mycobacterium
canettii CIPT 140010059]
Length=255
Score = 506 bits (1303), Expect = 1e-141, Method: Compositional matrix adjust.
Identities = 250/255 (99%), Positives = 253/255 (99%), Gaps = 0/255 (0%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
+ADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAV LVFYIVTSRDDKKDGVAGPGDA
Sbjct 1 MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVALVFYIVTSRDDKKDGVAGPGDA 60
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVS+LVDIGAVAADYTMVA
Sbjct 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSRLVDIGAVAADYTMVA 120
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
ILDS SNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA
Sbjct 121 ILDSPSNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKE+V
Sbjct 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEMV 240
Query 241 GDVPGIDSAAATATS 255
GDVPGIDSAAATATS
Sbjct 241 GDVPGIDSAAATATS 255
>gi|118617572|ref|YP_905904.1| hypothetical protein MUL_1990 [Mycobacterium ulcerans Agy99]
gi|118569682|gb|ABL04433.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=255
Score = 410 bits (1053), Expect = 1e-112, Method: Compositional matrix adjust.
Identities = 195/255 (77%), Positives = 219/255 (86%), Gaps = 0/255 (0%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
+ADK+KRP R DL S DG FGRL+QIGGT VV FAV LVFYIVTS K G AGP D+
Sbjct 1 MADKNKRPTRIDLNSPDGKFGRLIQIGGTAFVVFFAVALVFYIVTSHQKKGGGAAGPDDS 60
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
VRVTSSKLVTQPGT +PK V++FYEDFLCPACG+FER FGPTVS+LVDIGAVAADYTMV
Sbjct 61 VRVTSSKLVTQPGTQDPKVVMTFYEDFLCPACGMFERAFGPTVSRLVDIGAVAADYTMVD 120
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
IL S NQ+YS+RAAA AYCVADESI+AFRRFH A+FSKDIQP+E+GK FPDNA+LIE+A
Sbjct 121 ILSSPRNQNYSARAAATAYCVADESIDAFRRFHTAMFSKDIQPSEVGKTFPDNAKLIEIA 180
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
REAG G VPDCINSGKY++KV+GLA A NVHATPTV++NG EYEWSTP ALVAKIKEIV
Sbjct 181 REAGAAGTVPDCINSGKYLDKVNGLAVAANVHATPTVKINGEEYEWSTPKALVAKIKEIV 240
Query 241 GDVPGIDSAAATATS 255
G +PGID+ AA ATS
Sbjct 241 GPIPGIDAVAANATS 255
>gi|183981760|ref|YP_001850051.1| hypothetical protein MMAR_1747 [Mycobacterium marinum M]
gi|183175086|gb|ACC40196.1| conserved membrane protein [Mycobacterium marinum M]
Length=255
Score = 403 bits (1036), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 197/255 (78%), Positives = 221/255 (87%), Gaps = 0/255 (0%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
+ADK+KRPPR DL S DG FGRL+QIGGT VV FAV LVFYIVTS K G AGP D+
Sbjct 1 MADKNKRPPRIDLNSPDGKFGRLIQIGGTAFVVFFAVALVFYIVTSHQKKGGGAAGPDDS 60
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
VRVTSSKLVTQPGT +PK V++FYEDFLCPACG+FER FGPTVS+LVDIGAVAADYTMV
Sbjct 61 VRVTSSKLVTQPGTQDPKVVMTFYEDFLCPACGMFERAFGPTVSRLVDIGAVAADYTMVD 120
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
IL S NQ+YS+RAAAAAYCVADESI+AFRRFH A+FSKDIQP+E+GK FPDNA+LIE+A
Sbjct 121 ILSSPRNQNYSARAAAAAYCVADESIDAFRRFHTAMFSKDIQPSEVGKTFPDNAKLIEIA 180
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
REAG G VPDCINSGKY++KV+GLA A NVHATPTV++NG EYEWSTP ALVAKIKEIV
Sbjct 181 REAGAAGTVPDCINSGKYLDKVNGLAVAANVHATPTVKINGEEYEWSTPEALVAKIKEIV 240
Query 241 GDVPGIDSAAATATS 255
G +PGID+ AA ATS
Sbjct 241 GPIPGIDAVAANATS 255
>gi|240168971|ref|ZP_04747630.1| hypothetical protein MkanA1_06640 [Mycobacterium kansasii ATCC
12478]
Length=253
Score = 392 bits (1008), Expect = 2e-107, Method: Compositional matrix adjust.
Identities = 205/250 (82%), Positives = 226/250 (91%), Gaps = 2/250 (0%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
+ADK+KRPPR DLKS DG FGRL+QIGGT +VV+FAVVLVFYIVTS D K G DA
Sbjct 1 MADKNKRPPRIDLKSPDGKFGRLMQIGGTALVVLFAVVLVFYIVTSHDKKGGGATA--DA 58
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACG FERGFGPTVS+L+DIGA+AADYTMV
Sbjct 59 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGNFERGFGPTVSRLIDIGAIAADYTMVD 118
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
IL S N +YS+RAAAAAYCVADESI+AFRRFH ALFSKDIQP+E+GK FPDNA+LIELA
Sbjct 119 ILSSPRNDNYSARAAAAAYCVADESIDAFRRFHTALFSKDIQPSEVGKTFPDNAKLIELA 178
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
REAGVVGKVPDCINSGKY+ KVDGLAAA N+HATPTV++NGTEYEWSTP ALVAKIKEIV
Sbjct 179 REAGVVGKVPDCINSGKYLSKVDGLAAAANIHATPTVKINGTEYEWSTPEALVAKIKEIV 238
Query 241 GDVPGIDSAA 250
GD+PG+D+AA
Sbjct 239 GDIPGMDTAA 248
>gi|254821182|ref|ZP_05226183.1| hypothetical protein MintA_14692 [Mycobacterium intracellulare
ATCC 13950]
Length=255
Score = 384 bits (987), Expect = 5e-105, Method: Compositional matrix adjust.
Identities = 188/254 (75%), Positives = 217/254 (86%), Gaps = 2/254 (0%)
Query 1 VADKSKRPPRFDLKSADG-SFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGD 59
+ADK KRPPRFD+KSA G GRLVQIGGT VV+FAVVLVFYIVTS + KK G GD
Sbjct 1 MADKPKRPPRFDMKSASGGKSGRLVQIGGTAFVVIFAVVLVFYIVTS-NHKKPAATGAGD 59
Query 60 AVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMV 119
VRVTSSKLVTQPGT+NPKAVV+FYEDFLCPACG FER FGPTVS+L+D+GA+AADY+MV
Sbjct 60 TVRVTSSKLVTQPGTNNPKAVVTFYEDFLCPACGNFERTFGPTVSRLIDVGAIAADYSMV 119
Query 120 AILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIEL 179
+ILDS+ N +YSSRAA AA CVADES++AFRRFH ALF+ DIQP+E GK FPDNARLIEL
Sbjct 120 SILDSSRNHNYSSRAANAARCVADESLDAFRRFHTALFTTDIQPSETGKSFPDNARLIEL 179
Query 180 AREAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEI 239
AREAG VGKVPDCINSGKY++KV G AAA + ATPT+++NG +Y+ STP ALV+KIKEI
Sbjct 180 AREAGAVGKVPDCINSGKYLDKVTGEAAAAQIKATPTIKINGEDYDPSTPDALVSKIKEI 239
Query 240 VGDVPGIDSAAATA 253
VG++PGID A A A
Sbjct 240 VGNIPGIDGAVAPA 253
>gi|41409103|ref|NP_961939.1| hypothetical protein MAP3005c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465290|ref|YP_882984.1| hypothetical protein MAV_3813 [Mycobacterium avium 104]
gi|254776237|ref|ZP_05217753.1| hypothetical protein MaviaA2_16413 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41397923|gb|AAS05553.1| hypothetical protein MAP_3005c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166577|gb|ABK67474.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336459139|gb|EGO38087.1| protein-disulfide isomerase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=255
Score = 380 bits (976), Expect = 9e-104, Method: Compositional matrix adjust.
Identities = 188/254 (75%), Positives = 212/254 (84%), Gaps = 2/254 (0%)
Query 1 VADKSKRPPRFDLKSADG-SFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGD 59
+AD KRPPRFD+KSA G GRLVQIGGT VV+FAV LVFYIVTS KK G G GD
Sbjct 1 MADNPKRPPRFDMKSASGGKSGRLVQIGGTAFVVIFAVALVFYIVTSHH-KKAGPTGAGD 59
Query 60 AVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMV 119
VRVTSSKL+TQPG+SNPKAVV+ YEDFLCPACG FER FGPTVSKL+D+GA+AADY+MV
Sbjct 60 TVRVTSSKLITQPGSSNPKAVVTLYEDFLCPACGNFERTFGPTVSKLIDLGAIAADYSMV 119
Query 120 AILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIEL 179
+ILDS NQ+YSSRA AAA CVADES++AFRRFH ALFS IQP+E GK FPDNARLIEL
Sbjct 120 SILDSPRNQNYSSRAGAAALCVADESLDAFRRFHTALFSTAIQPSETGKTFPDNARLIEL 179
Query 180 AREAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEI 239
ARE+GVVGKVPDCINSGKYI KV G AAA + ATPT+++NG +Y+ STP ALV KIKEI
Sbjct 180 ARESGVVGKVPDCINSGKYIAKVTGEAAAAKIRATPTIKINGEDYDPSTPDALVGKIKEI 239
Query 240 VGDVPGIDSAAATA 253
VGD+PG+D A A A
Sbjct 240 VGDIPGLDGAVAPA 253
>gi|342858212|ref|ZP_08714867.1| hypothetical protein MCOL_05041 [Mycobacterium colombiense CECT
3035]
gi|342133916|gb|EGT87096.1| hypothetical protein MCOL_05041 [Mycobacterium colombiense CECT
3035]
Length=255
Score = 380 bits (975), Expect = 2e-103, Method: Compositional matrix adjust.
Identities = 188/254 (75%), Positives = 214/254 (85%), Gaps = 2/254 (0%)
Query 1 VADKSKRPPRFDLKSADGS-FGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGD 59
+ADK KRPPRFD+KSA G RLVQIGGT VV+FAV LVFYIVTS KK G G GD
Sbjct 1 MADKPKRPPRFDMKSASGGRSSRLVQIGGTAFVVIFAVALVFYIVTSHH-KKTGPTGAGD 59
Query 60 AVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMV 119
VRVTSSKLVTQPG+SNPKAVV+FYEDFLCPACG FER FGPTVS+L+D+GA+AADY MV
Sbjct 60 TVRVTSSKLVTQPGSSNPKAVVTFYEDFLCPACGNFERTFGPTVSRLIDLGAIAADYNMV 119
Query 120 AILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIEL 179
+ILDS+ NQ+YSSRA AAA CVADES +AFRRFH+ALFS DIQP+E GK FPDNARLIEL
Sbjct 120 SILDSSRNQNYSSRAGAAALCVADESQDAFRRFHSALFSTDIQPSETGKTFPDNARLIEL 179
Query 180 AREAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEI 239
AREAG GKVPDCINSGKY+ KV G AAA +++ATPT+++NG +Y+ STP ALV KIKEI
Sbjct 180 AREAGAAGKVPDCINSGKYLSKVTGEAAAGHINATPTIKINGDDYDPSTPDALVNKIKEI 239
Query 240 VGDVPGIDSAAATA 253
VG++PGID A A A
Sbjct 240 VGNIPGIDGAVAPA 253
>gi|296171359|ref|ZP_06852715.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894190|gb|EFG73948.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=254
Score = 370 bits (949), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 187/255 (74%), Positives = 216/255 (85%), Gaps = 1/255 (0%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
+ADKSKRPPRFD+K+ADG GRLVQIGGT +VV+F V LV YIV + KK G GD
Sbjct 1 MADKSKRPPRFDMKAADGKSGRLVQIGGTAVVVIFLVALVSYIVVTHH-KKTAAIGAGDT 59
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
VRVTSSKLVTQPGTSNPKAVV+FYEDFLCPACG FER FGPTVS+L+D+GA+AADY+MV+
Sbjct 60 VRVTSSKLVTQPGTSNPKAVVTFYEDFLCPACGNFERTFGPTVSRLIDVGAIAADYSMVS 119
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
ILD+A NQ+YSSRA AAA CVADESI+AFRRFH ALF+ D+QP+E G FPDNARLIE+A
Sbjct 120 ILDNARNQNYSSRAGAAALCVADESIDAFRRFHTALFTTDLQPSERGPSFPDNARLIEIA 179
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
REAGVVGKVPDCINSGKYI+KV AAA ++ATPT+++NG +Y+ STP ALVAKIK IV
Sbjct 180 REAGVVGKVPDCINSGKYIDKVKAEAAAAKINATPTIKINGDDYDPSTPDALVAKIKSIV 239
Query 241 GDVPGIDSAAATATS 255
GDVPGID A A A +
Sbjct 240 GDVPGIDGAVAPAAT 254
>gi|333991312|ref|YP_004523926.1| hypothetical protein JDM601_2672 [Mycobacterium sp. JDM601]
gi|333487280|gb|AEF36672.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=251
Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 156/247 (64%), Positives = 191/247 (78%), Gaps = 2/247 (0%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
+A K KRP LK+ D +QIG IVVVFAV L+ YIV S KK AG G+A
Sbjct 1 MASKPKRPGASGLKAGDHKRNLAMQIGLIAIVVVFAVGLIGYIVVSNSHKKG--AGAGEA 58
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
VRVTSSKLVT+ GT PKAV++FYEDFLCPACG ER GPTVS+L+D GA+AADY MVA
Sbjct 59 VRVTSSKLVTKDGTDEPKAVLTFYEDFLCPACGNLERVLGPTVSRLIDSGAIAADYHMVA 118
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
ILD + N +YSSRA AAAYCVADE+I+AFRRFH ALF+ ++QP+E+G +FPD+ RLIELA
Sbjct 119 ILDRSQNDNYSSRAGAAAYCVADENIDAFRRFHTALFTAELQPSEIGTEFPDDKRLIELA 178
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
R+AG G VP CINSGKY++ V G+A + +HATPT+R+NG +Y STP ALV+KI+EIV
Sbjct 179 RQAGAAGSVPACINSGKYLKMVGGMAQSAGIHATPTLRINGEDYRPSTPEALVSKIREIV 238
Query 241 GDVPGID 247
GD+PG+D
Sbjct 239 GDLPGMD 245
>gi|15827883|ref|NP_302146.1| hypothetical protein ML1667 [Mycobacterium leprae TN]
gi|221230360|ref|YP_002503776.1| hypothetical protein MLBr_01667 [Mycobacterium leprae Br4923]
gi|13093436|emb|CAC30620.1| possible conserved membrane protein [Mycobacterium leprae]
gi|219933467|emb|CAR71762.1| possible conserved membrane protein [Mycobacterium leprae Br4923]
Length=264
Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/258 (66%), Positives = 199/258 (78%), Gaps = 3/258 (1%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVA---GP 57
VAD KR RFDLKS DG GR V I GT IV +FAVV+VF ++ S+ K+DG A G
Sbjct 7 VADNRKRLQRFDLKSVDGRSGRAVVIAGTVIVAIFAVVVVFAVMKSQHAKQDGAAPLTGS 66
Query 58 GDAVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYT 117
GD VRVTSSKLVTQPGT +PK V+SFYEDFLCP CG FER FGPTVSKL+DIGA+AADY+
Sbjct 67 GDTVRVTSSKLVTQPGTHDPKVVMSFYEDFLCPGCGDFERNFGPTVSKLIDIGAIAADYS 126
Query 118 MVAILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLI 177
+V+ILD N +Y SRA AA+ CVADES++A+RRF AAL+S+ QP+EL FP+NA+LI
Sbjct 127 VVSILDHPRNHNYPSRAGAASLCVADESMDAYRRFRAALYSRSFQPSELASSFPENAKLI 186
Query 178 ELAREAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIK 237
E+AREAGVVGKVPDCINSGKY+ KV AA + ATPT+++NG EY+ TP ALVAKIK
Sbjct 187 EIAREAGVVGKVPDCINSGKYLAKVTAEAALAKISATPTIKINGDEYDPLTPEALVAKIK 246
Query 238 EIVGDVPGIDSAAATATS 255
IVG VPGID A T+
Sbjct 247 AIVGAVPGIDVAVTATTT 264
>gi|3150218|emb|CAA19187.1| putative transmembrane protein [Mycobacterium leprae]
Length=258
Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/258 (65%), Positives = 199/258 (78%), Gaps = 3/258 (1%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVA---GP 57
+AD KR RFDLKS DG GR V I GT IV +FAVV+VF ++ S+ K+DG A G
Sbjct 1 MADNRKRLQRFDLKSVDGRSGRAVVIAGTVIVAIFAVVVVFAVMKSQHAKQDGAAPLTGS 60
Query 58 GDAVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYT 117
GD VRVTSSKLVTQPGT +PK V+SFYEDFLCP CG FER FGPTVSKL+DIGA+AADY+
Sbjct 61 GDTVRVTSSKLVTQPGTHDPKVVMSFYEDFLCPGCGDFERNFGPTVSKLIDIGAIAADYS 120
Query 118 MVAILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLI 177
+V+ILD N +Y SRA AA+ CVADES++A+RRF AAL+S+ QP+EL FP+NA+LI
Sbjct 121 VVSILDHPRNHNYPSRAGAASLCVADESMDAYRRFRAALYSRSFQPSELASSFPENAKLI 180
Query 178 ELAREAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIK 237
E+AREAGVVGKVPDCINSGKY+ KV AA + ATPT+++NG EY+ TP ALVAKIK
Sbjct 181 EIAREAGVVGKVPDCINSGKYLAKVTAEAALAKISATPTIKINGDEYDPLTPEALVAKIK 240
Query 238 EIVGDVPGIDSAAATATS 255
IVG VPGID A T+
Sbjct 241 AIVGAVPGIDVAVTATTT 258
>gi|120403155|ref|YP_952984.1| hypothetical protein Mvan_2163 [Mycobacterium vanbaalenii PYR-1]
gi|119955973|gb|ABM12978.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=257
Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/247 (61%), Positives = 189/247 (77%), Gaps = 4/247 (1%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
+A K K+ R+DLK+AD LVQIG T +VV+FAV LV YIV S DDK AG A
Sbjct 1 MATKPKKNARYDLKAADRKRNLLVQIGLTAVVVIFAVTLVLYIVLSADDKP--TAGESRA 58
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
+RV S+ ++ + GT PKAV+S YEDFLCP CG FE+ FGPT+SKL+D GA+AADY MV
Sbjct 59 IRVESTSVIKKDGTDEPKAVLSMYEDFLCPHCGAFEQQFGPTISKLIDSGAIAADYYMVG 118
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
ILD + NQ+Y SRA AAYCVADES++AFRRFHAAL+++ QP+E G +PDNARLIE+A
Sbjct 119 ILDRSQNQNYPSRAGGAAYCVADESVDAFRRFHAALYAQ--QPSEAGSAYPDNARLIEVA 176
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
R++G G VP+CIN G Y++ V GLA+A V +TP+VR+NG +Y++STP ALV KIKEIV
Sbjct 177 RQSGAAGAVPECINKGTYVDMVAGLASATGVKSTPSVRINGEDYQYSTPEALVTKIKEIV 236
Query 241 GDVPGID 247
GDVPG++
Sbjct 237 GDVPGLE 243
>gi|145224781|ref|YP_001135459.1| hypothetical protein Mflv_4202 [Mycobacterium gilvum PYR-GCK]
gi|315445111|ref|YP_004077990.1| protein-disulfide isomerase [Mycobacterium sp. Spyr1]
gi|145217267|gb|ABP46671.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315263414|gb|ADU00156.1| protein-disulfide isomerase [Mycobacterium sp. Spyr1]
Length=257
Score = 308 bits (790), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/247 (61%), Positives = 186/247 (76%), Gaps = 4/247 (1%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
+A K K+ R+DLK+AD L+QIG T +VV+FAV LV YIV S DDK AG
Sbjct 1 MASKPKKNARYDLKAADRKRNLLIQIGLTAVVVIFAVALVLYIVGSADDKP--TAGESRG 58
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
+RV S+ ++ + GT PKAVVS YEDFLCP CG FE+ FGPT++KLVD GA+AADY MV
Sbjct 59 IRVESTSVIKKEGTDEPKAVVSMYEDFLCPHCGAFEQQFGPTINKLVDAGAIAADYYMVG 118
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
ILD NQ+Y +RA AAYCVADESI+AF+RFHAAL+++ QP E G +PDNARLIE+A
Sbjct 119 ILDRPQNQNYPARAGGAAYCVADESIDAFKRFHAALYAQ--QPGETGSTYPDNARLIEIA 176
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
R++G G VP+CIN G Y++ V GLA A + +TPTVR+NG EY++STP ALVAKIKEIV
Sbjct 177 RQSGATGGVPECINKGTYVDMVGGLARATEIKSTPTVRINGEEYQYSTPDALVAKIKEIV 236
Query 241 GDVPGID 247
GDVPG++
Sbjct 237 GDVPGLE 243
>gi|108798909|ref|YP_639106.1| hypothetical protein Mmcs_1941 [Mycobacterium sp. MCS]
gi|119868024|ref|YP_937976.1| hypothetical protein Mkms_1987 [Mycobacterium sp. KMS]
gi|126434509|ref|YP_001070200.1| hypothetical protein Mjls_1921 [Mycobacterium sp. JLS]
gi|108769328|gb|ABG08050.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119694113|gb|ABL91186.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126234309|gb|ABN97709.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=252
Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/255 (62%), Positives = 192/255 (76%), Gaps = 3/255 (1%)
Query 1 VADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA 60
+A K K+ PR+DLK+AD VQIG T +VVVFAV LV YIV S +DK +G A
Sbjct 1 MATKPKKTPRYDLKAADRKRNLFVQIGLTAVVVVFAVALVLYIVMSAEDKPG--SGEATA 58
Query 61 VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA 120
VRV + +VTQ GTS PKAV+S YEDFLCPACG FER FGPT++KL+D GAVAADY MV+
Sbjct 59 VRVAAENVVTQEGTSEPKAVLSLYEDFLCPACGNFERQFGPTINKLIDTGAVAADYYMVS 118
Query 121 ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA 180
ILD A YSSRA +AAYCVADE+ +AFRRFHAAL+++ IQPAE G +P + +L ELA
Sbjct 119 ILD-AQGDGYSSRAGSAAYCVADENKDAFRRFHAALYTEGIQPAEGGGTYPGDEQLTELA 177
Query 181 REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
R+AG G VP+CI G+Y++ V G+A+A + ATPTVR+NG +Y+ STP ALVAKIKEIV
Sbjct 178 RQAGAGGTVPECIKKGRYVDMVKGMASATEIRATPTVRINGEDYDPSTPDALVAKIKEIV 237
Query 241 GDVPGIDSAAATATS 255
GDVPG+D AA TS
Sbjct 238 GDVPGLDGAAPAPTS 252
>gi|118468714|ref|YP_886750.1| serine-threonine protein kinase [Mycobacterium smegmatis str.
MC2 155]
gi|118170001|gb|ABK70897.1| putative serine-threonine protein kinase [Mycobacterium smegmatis
str. MC2 155]
Length=242
Score = 284 bits (727), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 148/243 (61%), Positives = 184/243 (76%), Gaps = 3/243 (1%)
Query 4 KSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRV 63
K K+ ++DLK+AD LVQIG T +VV+FAV LV YIV + + D AG G A+RV
Sbjct 3 KPKKTAKYDLKAADRKRNLLVQIGLTAVVVLFAVALVLYIVMNGEKNPD--AGAGKAIRV 60
Query 64 TSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILD 123
SS +VT G+S+PK V+ YEDFLCPACG FER FGPT+SKL+D GA+AADY MV ILD
Sbjct 61 ASSDVVTDEGSSDPKVVLGLYEDFLCPACGNFERSFGPTISKLIDSGAIAADYYMVGILD 120
Query 124 SASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREA 183
A N YSSRA A YCVADES +AFRRFH AL++ ++QP E +PDNARLIELAR+A
Sbjct 121 RAGN-GYSSRAGGAGYCVADESTDAFRRFHTALYTPELQPQENSGIYPDNARLIELARQA 179
Query 184 GVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIVGDV 243
G GKV DCIN+G+Y+E V G+AAA ++ATPT+R+NG +Y +TP ALVAK+KEIVG+V
Sbjct 180 GAAGKVADCINNGRYVEMVKGMAAATGINATPTIRINGEDYSPTTPDALVAKVKEIVGEV 239
Query 244 PGI 246
PG+
Sbjct 240 PGL 242
>gi|169630350|ref|YP_001703999.1| hypothetical protein MAB_3269c [Mycobacterium abscessus ATCC
19977]
gi|169242317|emb|CAM63345.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=257
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 119/256 (47%), Positives = 162/256 (64%), Gaps = 15/256 (5%)
Query 4 KSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDG-----VAGPG 58
K K+PP +DLK A+ +L+QIG T IVV+FAV LV +IV S +KKD AG
Sbjct 3 KPKQPPSYDLKKAEQRRSQLIQIGLTAIVVLFAVGLVGFIVLS--NKKDEGPPAPPAGEV 60
Query 59 DAVRVTS---SKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAAD 115
A++V + +KL+T+ GT+ PK V++ ED +CPAC +FE+ FGPTV KL+D GAV AD
Sbjct 61 KAIQVVTPGPAKLITKEGTTEPKVVLTLIEDPICPACAMFEQEFGPTVKKLIDTGAVRAD 120
Query 116 YTMVAILDSAS-NQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELG-KDFPDN 173
Y MV ILD + YSSRA+AAAYCVAD+S E F +FH+ L+ QP E+ K + D+
Sbjct 121 YDMVGILDVPRLKRDYSSRASAAAYCVADQSQELFLKFHSVLYDPSKQPDEVNSKTWHDD 180
Query 174 ARLIELAREAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEW---STPA 230
LI+ A+ G V CI KYI V L +N+ ATPT+R+NG ++E +TP
Sbjct 181 KWLIDQAKAVGASDAVAKCIKDKKYINMVKELGPKLNIQATPTIRINGKDWEIGKGTTPD 240
Query 231 ALVAKIKEIVGDVPGI 246
L+ + +I G VPG+
Sbjct 241 DLIKAVTDITGPVPGL 256
>gi|8439568|gb|AAF74995.1|AF143401_1 exported protein 996A160 [Mycobacterium avium]
Length=85
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/85 (73%), Positives = 71/85 (84%), Gaps = 0/85 (0%)
Query 93 GIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADESIEAFRRF 152
G ER FGPTVSKL+D+GA+ ADY+MV+ILDS NQ+YSSR AAA CVADES++AFRRF
Sbjct 1 GNLERTFGPTVSKLIDLGAITADYSMVSILDSPRNQNYSSRTGAAALCVADESLDAFRRF 60
Query 153 HAALFSKDIQPAELGKDFPDNARLI 177
H ALFS IQP+E GK FPDNARLI
Sbjct 61 HTALFSTAIQPSETGKTFPDNARLI 85
>gi|326385104|ref|ZP_08206774.1| DSBA oxidoreductase [Gordonia neofelifaecis NRRL B-59395]
gi|326196189|gb|EGD53393.1| DSBA oxidoreductase [Gordonia neofelifaecis NRRL B-59395]
Length=249
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/231 (35%), Positives = 118/231 (52%), Gaps = 26/231 (11%)
Query 12 DLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAG--------PGDAVRV 63
D + A+ + +IG ++++ AV + F+ + D G P ++R+
Sbjct 10 DPRQAERRRSLMYKIGAAVVLIIIAVGVTFWAINHNKDSASTTGGSATPTVMRPDGSIRI 69
Query 64 TSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILD 123
TS+ P + PKAVV+ EDF CPAC FE FG T+++L VA DY +A L+
Sbjct 70 TSA-----PAGTEPKAVVTLVEDFQCPACKAFEASFGSTITELEKNPQVAIDYHPIAFLN 124
Query 124 SASNQHYSSRAAAAAYCVADESIEA-----FRRFHAALFSKDIQPAELGKDFPDNARLIE 178
S +YSSRA A+ CVA+ + + + +FH LF+ QP E G PD + LI
Sbjct 125 RMSTTNYSSRAMNASTCVAESTAKNGDWSIWLKFHNLLFTN--QPEEGGSGLPD-SELIS 181
Query 179 LAREAGVVGKVPDCINS---GKYIEK-VDGLAAAVNVHATPTVRVNGTEYE 225
LAR+AG G + DCIN G+++ K + TP VRVNG ++
Sbjct 182 LARQAGAEG-ITDCINDNQFGQWVTKQTSDMTGNPEFQGTPWVRVNGQTFD 231
>gi|262201206|ref|YP_003272414.1| DSBA oxidoreductase [Gordonia bronchialis DSM 43247]
gi|262084553|gb|ACY20521.1| DSBA oxidoreductase [Gordonia bronchialis DSM 43247]
Length=244
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/182 (40%), Positives = 96/182 (53%), Gaps = 11/182 (6%)
Query 67 KLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSAS 126
++ T P S P AVV+ +ED CP C FE FG + + VA DY +++ LD AS
Sbjct 66 RVSTAPRGSQPPAVVTVFEDLQCPFCKQFEAQFGAALRGMQANPRVAVDYRIISFLDRAS 125
Query 127 NQHYSSRAAAAAYCVADES-----IEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAR 181
YSSRAA A+ CVA+ + + FH LF D QPAE G DNA L A
Sbjct 126 ENEYSSRAANASACVAESTATGGDWSKWLAFHTLLF--DRQPAEGGAGHDDNA-LNAFAV 182
Query 182 EAGVVGKVPDCINSGKYIEKVDGLAAA--VNVHATPTVRVNGTEYEWSTPAALVAKIKEI 239
+AG V CI+ +Y + A + TPTV++NGT++E STP AL+A + +
Sbjct 183 QAGAT-DVSACISERRYAAWIAEATQAGLREIEGTPTVKINGTDHELSTPDALIAAVNQA 241
Query 240 VG 241
G
Sbjct 242 AG 243
>gi|54027197|ref|YP_121439.1| hypothetical protein nfa52230 [Nocardia farcinica IFM 10152]
gi|54018705|dbj|BAD60075.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=248
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/232 (32%), Positives = 109/232 (47%), Gaps = 17/232 (7%)
Query 6 KRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTS 65
+R P + + AD +Q G +++ + I + ++ D GP A+ +
Sbjct 7 RRNPLLEAERADRKRKIAIQAGVAAVLIGLVAAIGIGIAVKKAERDD--PGPTPAIAAQN 64
Query 66 SKLVT---------QPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADY 116
VT + G + V D CPAC FE +G + V+ G A +Y
Sbjct 65 GAAVTGSITDSGAVRIGKPDATVTVRVVADLQCPACKNFEATYGQLLEDAVNNGTAAVEY 124
Query 117 TMVAILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARL 176
+++ LD AS YSSRAA AAYCVA++ F+ + +F++ QPAE G D+ +L
Sbjct 125 NVISFLDRASTNEYSSRAANAAYCVAEQDPAKFQTWLKTMFAQ--QPAEGGAGHTDD-QL 181
Query 177 IELAREAGVVGKVPDCINSGKYIEKVDGLAAAV---NVHATPTVRVNGTEYE 225
IE+ARE G V CI Y + V AV V +TPTV V+G + +
Sbjct 182 IEIAREVGYTDAVAGCIQDRTYAKYVTSKTQAVFGEGVQSTPTVFVDGQQVQ 233
>gi|323357350|ref|YP_004223746.1| protein-disulfide isomerase [Microbacterium testaceum StLB037]
gi|323273721|dbj|BAJ73866.1| protein-disulfide isomerase [Microbacterium testaceum StLB037]
Length=234
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/150 (38%), Positives = 83/150 (56%), Gaps = 10/150 (6%)
Query 80 VVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILD-SASNQHYSSRAAAAA 138
V Y DF+CP C FE+ +GPT+ +LVD G + + ++ILD S+ YS+R+A+AA
Sbjct 66 TVDTYVDFMCPICNSFEQSYGPTIQQLVDDGTITLNIHPISILDRSSQGTQYSTRSASAA 125
Query 139 YCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGKY 198
YCVA ++ + F A++++ QP E G DNA + +A AG V CIN G Y
Sbjct 126 YCVAVDNPANVQAFVKAMYAQ--QPTE-GTSGLDNATIASIATSAGASDAVTSCINDGTY 182
Query 199 IEKVDGLAAAVNVH------ATPTVRVNGT 222
+ V + + +TPT+ VNGT
Sbjct 183 EKYVTAMTRQTPIQSGASGVSTPTIVVNGT 212
>gi|326385103|ref|ZP_08206773.1| DSBA oxidoreductase [Gordonia neofelifaecis NRRL B-59395]
gi|326196188|gb|EGD53392.1| DSBA oxidoreductase [Gordonia neofelifaecis NRRL B-59395]
Length=218
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/166 (37%), Positives = 88/166 (54%), Gaps = 14/166 (8%)
Query 85 EDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADE 144
ED CPAC FE +G T+++L + A DY +++ LD S+ YSSRAA A+YCV +
Sbjct 55 EDMACPACKAFEAAYGDTLAELAALPGAAVDYRVISFLDRMSDDQYSSRAANASYCVWNR 114
Query 145 ------SIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGKY 198
+ +RRF A F QPAE G D+ RL +A+ AG G V CI + +Y
Sbjct 115 PGDDRARQDTWRRFQVAAFR--AQPAEGGPGLSDD-RLAAMAKTAG-AGDVSTCITTRQY 170
Query 199 IEKVDGLAAAV----NVHATPTVRVNGTEYEWSTPAALVAKIKEIV 240
+ V G ++ TPT+ VNG + + A L+ K+K ++
Sbjct 171 AQDVHGTTSSTMSEPEFEGTPTLLVNGERLDLRSAATLLDKVKGLL 216
>gi|325675803|ref|ZP_08155487.1| non-specific serine/threonine protein kinase [Rhodococcus equi
ATCC 33707]
gi|325553774|gb|EGD23452.1| non-specific serine/threonine protein kinase [Rhodococcus equi
ATCC 33707]
Length=249
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/211 (36%), Positives = 110/211 (53%), Gaps = 17/211 (8%)
Query 26 IGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPG----DAVRVTSSKL-VTQPGTSNPKAV 80
+GG +VV+ A+V+ ++T RD K G G AV+VT + V + G +
Sbjct 24 VGGIAVVVIAALVIGGILLT-RDSNKPRNEGYGAVQNSAVQVTMGEAGVVRLGLPDVTNT 82
Query 81 VSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSAS-NQHYSSRAAAAAY 139
+ +ED +CP C E G V++ +D G VA +Y ++ L+ S + YS+RA AA+
Sbjct 83 IDVFEDPMCPYCAQLEEKHGQEVAQAIDEGKVAVNYHILNFLNRLSASGDYSTRAVAASQ 142
Query 140 CVAD--ESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGK 197
CVA ++I A+ +FHA LFS QPAE GK N +L LA++AG +CI SG+
Sbjct 143 CVAQTGDAI-AYSKFHAELFSPTNQPAENGKSDLSNEQLATLAKDAGADEAAVNCITSGE 201
Query 198 YIEKVDGLA-------AAVNVHATPTVRVNG 221
+++ A AA TP V NG
Sbjct 202 RMQQAAADAETGRQALAASGATGTPAVVHNG 232
>gi|312140575|ref|YP_004007911.1| hypothetical protein REQ_32310 [Rhodococcus equi 103S]
gi|311889914|emb|CBH49231.1| putative secreted protein [Rhodococcus equi 103S]
Length=249
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/211 (36%), Positives = 110/211 (53%), Gaps = 17/211 (8%)
Query 26 IGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPG----DAVRVTSSKL-VTQPGTSNPKAV 80
+GG +VV+ A+V+ ++T RD K G G AV+VT + V + G +
Sbjct 24 VGGIAVVVIAALVIGGILLT-RDSNKPRNEGYGAVQNSAVQVTMGEAGVVRLGLPDVTNT 82
Query 81 VSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSAS-NQHYSSRAAAAAY 139
+ +ED +CP C E G V++ +D G VA +Y ++ L+ S + YS+RA AA+
Sbjct 83 IDVFEDPMCPYCAQLEEKHGQEVAQAIDEGKVAVNYHILNFLNRLSVSGDYSTRAVAASQ 142
Query 140 CVAD--ESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGK 197
CVA ++I A+ +FHA LFS QPAE GK N +L LA++AG +CI SG+
Sbjct 143 CVAQTGDAI-AYSKFHAELFSPTNQPAENGKSDLSNEQLATLAKDAGADEAAVNCITSGE 201
Query 198 YIEKVDGLA-------AAVNVHATPTVRVNG 221
+++ A AA TP V NG
Sbjct 202 RMQQAAADAETGRQALAASGATGTPAVVHNG 232
>gi|330466080|ref|YP_004403823.1| DSBA oxidoreductase [Verrucosispora maris AB-18-032]
gi|328809051|gb|AEB43223.1| DSBA oxidoreductase [Verrucosispora maris AB-18-032]
Length=238
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/224 (36%), Positives = 103/224 (46%), Gaps = 27/224 (12%)
Query 23 LVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGT-----SNP 77
V IG ++VV L+ + V S VA PG T+ GT S P
Sbjct 29 WVSIGAVAVLVVAG--LIGWSVWSSQSSGTFVAPPG----------ATEDGTGIVVGSGP 76
Query 78 KAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSSRAAAA 137
+ YED+LCPAC FE+ G T+ +LV G Y VA L+ S+ YS+RA+AA
Sbjct 77 -VTIDVYEDYLCPACKQFEQTSGATIEQLVSDGKARVVYHPVAYLNRFSSTQYSTRASAA 135
Query 138 AYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGV-VGKVPDCINSG 196
+ C A+ F F ALF D QP E G DN LI++ E G+ C+ G
Sbjct 136 SGCAAEGG--KFTEFSKALF--DKQPPENGAQLSDN-ELIDIGAEVGLNRDSFGSCVRDG 190
Query 197 KY---IEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIK 237
KY V A NV TPTV VNG + TP + A ++
Sbjct 191 KYKPWTSHVSEEATRANVTGTPTVLVNGEQVREWTPENITAAVE 234
>gi|229490970|ref|ZP_04384803.1| serine/threonine-protein kinase PknE [Rhodococcus erythropolis
SK121]
gi|229322086|gb|EEN87874.1| serine/threonine-protein kinase PknE [Rhodococcus erythropolis
SK121]
Length=247
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/211 (37%), Positives = 105/211 (50%), Gaps = 17/211 (8%)
Query 26 IGGTTIVVVFAVVL--VFYIVTSRDDKKDG---VAGPGDAVRVTSSKLVTQPGTSNPKAV 80
IGG ++V+ A+V+ V + + + DG V AV V + +V G +
Sbjct 23 IGGLAVLVIAALVIGGVLWTNSKNKPQNDGYGSVQSSEVAVTVQDNGVVLL-GKPSAATT 81
Query 81 VSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQ-HYSSRAAAAAY 139
+ +ED LCPAC E G ++ VD G VA Y M+ L+ AS YS+RA AA
Sbjct 82 IELFEDPLCPACAALEHLSGQALAAAVDNGDVAVRYHMLNFLNRASGSGDYSTRAGAALL 141
Query 140 CVAD--ESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGK 197
CVA ++I A+ FH LF+ D QPAE G N L ++AR+AG V CI+SG
Sbjct 142 CVAQGGDAI-AYSAFHNKLFATDTQPAEGGSSDHTNDDLAQIARDAGASEDVATCISSGT 200
Query 198 YIEKVDGLAAA-------VNVHATPTVRVNG 221
+E AAA V + TPTV NG
Sbjct 201 NVEAAAANAAAASQALKDVGSNGTPTVVANG 231
>gi|226305818|ref|YP_002765778.1| hypothetical protein RER_23310 [Rhodococcus erythropolis PR4]
gi|226184935|dbj|BAH33039.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=247
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/211 (37%), Positives = 105/211 (50%), Gaps = 17/211 (8%)
Query 26 IGGTTIVVVFAVVL--VFYIVTSRDDKKDG---VAGPGDAVRVTSSKLVTQPGTSNPKAV 80
IGG ++V+ A+V+ V + + + DG V AV V + +V G +
Sbjct 23 IGGLAVLVIAALVIGGVLWTNSKNKPQNDGYGSVQSSEVAVTVQDNGVVLL-GKPSAATT 81
Query 81 VSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQ-HYSSRAAAAAY 139
+ +ED LCPAC E G ++ VD G VA Y M+ L+ AS YS+RA AA
Sbjct 82 IDLFEDPLCPACAALEHLSGQALAAAVDNGDVAVRYHMLNFLNRASGSGDYSTRAGAALL 141
Query 140 CVAD--ESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGK 197
CVA ++I A+ FH LF+ D QPAE G N L ++AR+AG V CI+SG
Sbjct 142 CVAQGGDAI-AYSAFHNKLFATDTQPAEGGSSDHTNDDLAQIARDAGASEDVATCISSGT 200
Query 198 YIEKVDGLAAA-------VNVHATPTVRVNG 221
+E AAA V + TPTV NG
Sbjct 201 NVEAAAAHAAAASQALKDVGSNGTPTVVANG 231
>gi|239916941|ref|YP_002956499.1| protein-disulfide isomerase [Micrococcus luteus NCTC 2665]
gi|281414602|ref|ZP_06246344.1| protein-disulfide isomerase [Micrococcus luteus NCTC 2665]
gi|239838148|gb|ACS29945.1| protein-disulfide isomerase [Micrococcus luteus NCTC 2665]
Length=290
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/240 (33%), Positives = 106/240 (45%), Gaps = 47/240 (19%)
Query 26 IGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAV------------------------ 61
I G+ + VV + LV V +R+ AGP AV
Sbjct 38 IWGSVLAVVLVIGLVVAFVLNRNGDDAAAAGPIPAVANEQGGIELTSATDLAEGAGEREV 97
Query 62 ---------RVTSSKLVTQPGTS-----NPKAVVSFYEDFLCPACGIFERGFGPTVSKLV 107
+ SS+ T P T P +V YEDF C C FE G + + +
Sbjct 98 DPSKIEVPKQAASSQPETLPNTEARGDGEPTRIV-LYEDFNCVHCADFESTNGDQIEQWL 156
Query 108 DIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELG 167
+ G V +Y MV L + +NQ+YS+RAA AAYCVAD+ EA+ F +ALF+ G
Sbjct 157 EQGEVTVEYRMVDYLSAPNNQNYSARAANAAYCVADQKPEAYNGFVSALFA--AYDEHQG 214
Query 168 KDFPDNARLIELAREAGVVGKVPDCINSGKY---IEKVDGLAAAVNVHATPTVRVNGTEY 224
K DNA L +LA+E G + C+ G + +E A A V TPTV V+G +
Sbjct 215 KGL-DNAALTQLAQEHGA--DIASCVEDGTFRSAVEYTTRQARAAGVAGTPTVFVDGKNW 271
>gi|289705219|ref|ZP_06501620.1| DSBA-like thioredoxin domain protein [Micrococcus luteus SK58]
gi|289558066|gb|EFD51356.1| DSBA-like thioredoxin domain protein [Micrococcus luteus SK58]
Length=290
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/155 (39%), Positives = 80/155 (52%), Gaps = 9/155 (5%)
Query 73 GTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSS 132
G P +V Y DF C C FE + + ++ G V DY MV L + +NQ+YS+
Sbjct 123 GDGEPTRIV-LYADFNCVHCADFESSNAEQIEQWLEQGEVTVDYRMVDFLSAPNNQNYSA 181
Query 133 RAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDC 192
RAA AAYCVAD+ EA+ F ALF+ GK DNA LI+LA+E GV + C
Sbjct 182 RAANAAYCVADQKPEAYNGFVTALFAA--YDEHQGKGL-DNAALIQLAQEHGV--DISSC 236
Query 193 INSGKY---IEKVDGLAAAVNVHATPTVRVNGTEY 224
+ G + +E A V TPTV V+G +
Sbjct 237 VEDGTFRSAVEHTTRQARVAGVAGTPTVFVDGKNW 271
>gi|260906629|ref|ZP_05914951.1| DSBA oxidoreductase [Brevibacterium linens BL2]
Length=286
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/182 (36%), Positives = 89/182 (49%), Gaps = 18/182 (9%)
Query 79 AVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDS-ASNQHYSSRAAAA 137
A V+ Y DF CP C FE PT+ KL D G++ +Y V+ILD +S YS+RAA
Sbjct 108 ATVTVYFDFQCPGCKAFEEANTPTLEKLADEGSIVLEYKPVSILDRMSSGNEYSTRAANL 167
Query 138 AYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGV----------VG 187
A CV D E R F A++++ QP E G D L+++A EAGV
Sbjct 168 AACVVDSQPETVRDFFPAMYAQ--QPEEQGNGRTDE-ELLKVAEEAGVDTSKKLTSDPEQ 224
Query 188 KVPDCINSGK---YIEKVDGLAAAVNVHATPTVRVNGTEYE-WSTPAALVAKIKEIVGDV 243
V C+ ++EK A V ATP V +NG + + S P AL +I + G+
Sbjct 225 TVESCVTDQSFKDFVEKSSKEALDSGVEATPWVLINGKQTDKTSDPQALTLEILKATGEF 284
Query 244 PG 245
G
Sbjct 285 KG 286
>gi|333921721|ref|YP_004495302.1| DSBA oxidoreductase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483942|gb|AEF42502.1| DSBA oxidoreductase [Amycolicicoccus subflavus DQS3-9A1]
Length=236
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/170 (35%), Positives = 88/170 (52%), Gaps = 7/170 (4%)
Query 73 GTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSS 132
G + +S YEDF CPAC FE G T+ L D G Y +AILD S YS+
Sbjct 68 GPDDAAVTLSVYEDFQCPACQQFETLSGETLRDLADSGEARVVYHPIAILDRVSTTRYST 127
Query 133 RAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVG-KVPD 191
RAA+ A CVA+ + +++ + AA++ + QP+E G N +++ELA AG ++ +
Sbjct 128 RAASVAMCVAEYAEDSWLDWQAAMYQQ--QPSEGGAGLT-NEQMLELAANAGAESDELTE 184
Query 192 CINS---GKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKE 238
C+N G ++ ++ V TPTV +NG E P L ++E
Sbjct 185 CVNDVRYGDFVASTTRQSSEAGVAGTPTVLLNGEPVENIMPDGLRTAVQE 234
>gi|54026424|ref|YP_120666.1| hypothetical protein nfa44510 [Nocardia farcinica IFM 10152]
gi|54017932|dbj|BAD59302.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=246
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/182 (38%), Positives = 90/182 (50%), Gaps = 11/182 (6%)
Query 26 IGGTTI-VVVFAVVLVFYI-----VTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKA 79
+GG + V+V V LVF R+D V P V + L+T G + +
Sbjct 21 LGGVALAVIVLIVFLVFRWGKDEEAAIRNDGYGSVHDPAVPVSLAPDGLITL-GKPDARV 79
Query 80 VVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQ-HYSSRAAAAA 138
+ +ED LCPAC ER +G +++ +D G +A Y VA LD S YS+RA AA
Sbjct 80 TLDVFEDPLCPACRTLERIYGQEIAQQIDAGTLAVRYHYVAFLDPKSGSGDYSTRAIAAL 139
Query 139 YCVADESI-EAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGK 197
CVAD + RFH L D QP E G D N+ L +LAR AG + DCIN+G
Sbjct 140 QCVADTGDGPLYARFHDRLLVTD-QPTEGGDDH-SNSELADLARAAGAPQQAVDCINTGA 197
Query 198 YI 199
I
Sbjct 198 KI 199
>gi|258651909|ref|YP_003201065.1| protein-disulfide isomerase-like protein [Nakamurella multipartita
DSM 44233]
gi|258555134|gb|ACV78076.1| Protein-disulfide isomerase-like protein [Nakamurella multipartita
DSM 44233]
Length=307
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/132 (40%), Positives = 72/132 (55%), Gaps = 5/132 (3%)
Query 69 VTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSAS-N 127
V++PG S PKA + YED +CPAC ER +G +++ +D G + +Y MV L+ S +
Sbjct 128 VSKPG-STPKATIDVYEDAMCPACAELERQYGQQINQQLDNGNLTVNYHMVNFLNPRSPS 186
Query 128 QHYSSRAAAAAYCVADESIEA---FRRFHAALFSKDIQPAELGKDFPDNARLIELAREAG 184
YS+RAA A CVA S + +H+ALFS D QP E G N +L +LA G
Sbjct 187 GDYSTRAAGALLCVAQNSGSQPGVYMAYHSALFSPDHQPEEGGSSDLTNQQLADLATSVG 246
Query 185 VVGKVPDCINSG 196
CI+ G
Sbjct 247 ANEAAAGCISLG 258
>gi|291303225|ref|YP_003514503.1| protein-disulfide isomerase-like protein [Stackebrandtia nassauensis
DSM 44728]
gi|290572445|gb|ADD45410.1| Protein-disulfide isomerase-like protein [Stackebrandtia nassauensis
DSM 44728]
Length=252
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/212 (33%), Positives = 100/212 (48%), Gaps = 14/212 (6%)
Query 28 GTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAVVSFYEDF 87
G +V+V A+V I+ SRD V P T + LV PK + YEDF
Sbjct 35 GLAVVLVGALVATVMII-SRDYP---VRQP--KADSTKTALVLAEKDKKPKVKLELYEDF 88
Query 88 LCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADESIE 147
+CPACG F+ G + + V+ G V + + L AS+ +YS R+A+AA C ADE
Sbjct 89 ICPACGKFQTDNGDAIQQAVEAGQVELTFHPLNFLAGASSTNYSLRSASAATCAADEG-- 146
Query 148 AFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGKYIEKVDGLAA 207
F + LF+ QP E G+ D LI + G+ GK C+ KY V+ +
Sbjct 147 KFFDYEKQLFAN--QPPEGGEGLSDK-ELIGFGEDVGLSGKFSKCVKDQKYYGWVNQVTT 203
Query 208 AVN---VHATPTVRVNGTEYEWSTPAALVAKI 236
A + + +TPT ++G + E AK+
Sbjct 204 AASDDGIDSTPTALIDGKKVETKNFTTEFAKV 235
>gi|50954364|ref|YP_061652.1| hypothetical protein Lxx05860 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50950846|gb|AAT88547.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length=275
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/160 (37%), Positives = 84/160 (53%), Gaps = 13/160 (8%)
Query 79 AVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSSRAAAAA 138
A + + D+ CP C FE G T+ +++ G + VAILD+A N+ YS+R+A A
Sbjct 88 AHIQVWVDYQCPICEQFEAANGATIKQMLTDGTATLETHPVAILDNAPNKQYSTRSAVAV 147
Query 139 YCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGK-VPDCINSGK 197
CVADE F +AALF+ QP+E NA++++L ++AGV K + DC NS
Sbjct 148 ACVADEQPNKFLDVNAALFAN--QPSEQTGTGLTNAQILKLFKDAGVESKTITDCTNSQT 205
Query 198 YIEKVDGL--AAAVNVH--------ATPTVRVNGTEYEWS 227
+ V AAA + TPTV VNG Y+ S
Sbjct 206 FATFVTNQTKAAAADPQLRNSSGSFGTPTVFVNGQRYQGS 245
>gi|337765166|emb|CCB73875.1| putative integral membrane protein [Streptomyces cattleya NRRL
8057]
Length=308
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/189 (35%), Positives = 91/189 (49%), Gaps = 23/189 (12%)
Query 66 SKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSA 125
S L G S + ++ YEDF CPAC +FE+ F TV L D G + + Y +V ++DS
Sbjct 74 SDLAVPVGRSGAPSTLTVYEDFRCPACDVFEKTFRDTVHGLQDGGQLQSQYHLVTLIDSN 133
Query 126 SNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGV 185
S RA AA C D+ FR +H L+ D QP E F DN L++LA
Sbjct 134 LRGSGSLRAGNAAACAQDQG--KFRAYHDVLY--DNQPDERDDRFADNNYLLQLA----- 184
Query 186 VGKVP--------DCINSGKY---IEKVDGLAAAVNVHATPTVRVNGTE-YEWSTPAALV 233
KVP C+ G+Y I+K + ++TPTV +NG Y +TP
Sbjct 185 -DKVPGLRTAAFTSCVRDGRYDGWIKKSNSDFNNSGYNSTPTVLLNGKSIYGPNTPLTPD 243
Query 234 AKIKEIVGD 242
+K++V D
Sbjct 244 G-LKKMVAD 251
>gi|317508204|ref|ZP_07965885.1| hypothetical protein HMPREF9336_02257 [Segniliparus rugosus ATCC
BAA-974]
gi|316253494|gb|EFV12883.1| hypothetical protein HMPREF9336_02257 [Segniliparus rugosus ATCC
BAA-974]
Length=239
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/131 (39%), Positives = 68/131 (52%), Gaps = 3/131 (2%)
Query 73 GTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSAS-NQHYS 131
G + + YEDFLCPAC FE + + V GA+ Y + + D S + YS
Sbjct 64 GNAQAPLTIDVYEDFLCPACAGFEHRYAAQIVAAVQQGALRVRYHFLTVFDGRSASGSYS 123
Query 132 SRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELG-KDFPDNARLIELAREAGVVGKVP 190
SRAA AA CV +E AF R H LF +++P E G D D+ +L +LA EAG +
Sbjct 124 SRAAGAAMCVLEEDEGAFLRLHTTLFQPEVRPEEGGATDLADD-QLAKLAAEAGASTQAV 182
Query 191 DCINSGKYIEK 201
DC+ G E+
Sbjct 183 DCVRRGARAEQ 193
>gi|88855735|ref|ZP_01130398.1| hypothetical protein A20C1_06541 [marine actinobacterium PHSC20C1]
gi|88815059|gb|EAR24918.1| hypothetical protein A20C1_06541 [marine actinobacterium PHSC20C1]
Length=319
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/178 (36%), Positives = 82/178 (47%), Gaps = 17/178 (9%)
Query 81 VSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASN-QHYSSRAAAAAY 139
+ Y D+LCP CG FE+ + LV+ GA + + ILD S Q YSSRA A
Sbjct 127 IQIYVDYLCPICGAFEQTNAAYIEGLVENGAATLEVHPITILDRLSQGQRYSSRAVNAVA 186
Query 140 CVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGV--VGKVPDCINSGK 197
CVAD S F +H L S+ +QPAE +N LI L AGV V + +CI
Sbjct 187 CVADSSPNDFYAYHTLLLSEGVQPAENTSGL-NNDDLIALLDTAGVENVDAISECIQDES 245
Query 198 YIEKVDGLAAAV-----------NVHATPTVRVNGTEYEWSTP--AALVAKIKEIVGD 242
+ V A V TPTV VNG +YE + AA A + + GD
Sbjct 246 FKSWVKNSTARALSGPIPNSDVPQVTGTPTVLVNGVKYEGAVNDLAAFQAFVIQAAGD 303
>gi|269796443|ref|YP_003315898.1| protein-disulfide isomerase [Sanguibacter keddieii DSM 10542]
gi|269098628|gb|ACZ23064.1| protein-disulfide isomerase [Sanguibacter keddieii DSM 10542]
Length=277
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query 74 TSNPKAV-VSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASN-QHYS 131
TS AV V Y DFLCP CG FE G + L G ++ LD S+ YS
Sbjct 98 TSGDDAVRVDLYVDFLCPGCGAFEDVNGADLEALRADGTATVVLHTISFLDGRSDGSSYS 157
Query 132 SRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPD 191
+RAAAA VA+E+ EA F ALF D QP E G+ PD+ARL ++A EAGV V D
Sbjct 158 TRAAAAFSYVAEEAPEAAYDFQVALF--DHQPVE-GEPAPDDARLEQIAEEAGVPATVAD 214
Query 192 CINSGKYIEKVDGLAAAV----------NVHATPTVRVNGTEY--EWSTP 229
I+ +Y + V L TPTV V+GT + +WS P
Sbjct 215 GISDQRYRDFVGALTQVAFGDPDLLDDQGRFTTPTVLVDGTVFAGDWSAP 264
>gi|226365882|ref|YP_002783665.1| hypothetical protein ROP_64730 [Rhodococcus opacus B4]
gi|226244372|dbj|BAH54720.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=243
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/211 (33%), Positives = 99/211 (47%), Gaps = 15/211 (7%)
Query 26 IGGTTIVVVFAVVLVFYIVTS-----RDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAV 80
+GG ++V+ +V+ I S R+D GV V + + +V G +
Sbjct 20 LGGLAVLVIAVLVIGGVIWQSNRSKPRNDGYGGVQNSEVQVALQADGVVLL-GKPDAATT 78
Query 81 VSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSAS-NQHYSSRAAAAAY 139
V +ED +CP C E G +++ +D G VA Y ++ LD S + YS+RA AA+
Sbjct 79 VDLFEDPMCPYCAELENKNGQELAQSIDDGKVAVRYHVLNFLDRLSASGDYSTRAVAASE 138
Query 140 CVADESIE-AFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGKY 198
CVA+ A+ FHAALFS QP E G N L ++AR+AG CI +G
Sbjct 139 CVAETGDAVAYSAFHAALFSPANQPKENGSSDHTNEELAQIARDAGASDAAAQCITTGAS 198
Query 199 IEKVDGLA-------AAVNVHATPTVRVNGT 222
+E+ A AA TP V +GT
Sbjct 199 VEQARAHAEAGRQALAASGATGTPAVVKDGT 229
>gi|317508203|ref|ZP_07965884.1| DSBA thioredoxin domain-containing protein [Segniliparus rugosus
ATCC BAA-974]
gi|316253493|gb|EFV12882.1| DSBA thioredoxin domain-containing protein [Segniliparus rugosus
ATCC BAA-974]
Length=269
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/169 (36%), Positives = 82/169 (49%), Gaps = 10/169 (5%)
Query 73 GTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSAS-NQHYS 131
G K + YEDFLCPAC FE +G V+K V+ G + + M+ L+ S + YS
Sbjct 69 GKPEAKVTLDVYEDFLCPACAGFEEAYGAEVAKAVEAGQLRVRFHMLNFLNRGSASGDYS 128
Query 132 SRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPD 191
SRAA AA V ++ + F FH+ LFS+ +QP E N +L ++A E G D
Sbjct 129 SRAAGAALAVFQKAPDKFLAFHSKLFSQGVQPQEGSDSDLSNDQLAKIAEEVGAGAAAAD 188
Query 192 CINSGKYIEKVDGLAAA--------VNVHATPTVRVNGTEYEWSTPAAL 232
I SG ++ G A+A ATPTV + EW P L
Sbjct 189 -IRSGSQVKTAAGSASASIRQLQSITKKAATPTVLKDDKPVEWKDPQWL 236
>gi|325962215|ref|YP_004240121.1| protein-disulfide isomerase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323468302|gb|ADX71987.1| protein-disulfide isomerase [Arthrobacter phenanthrenivorans
Sphe3]
Length=291
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/157 (36%), Positives = 85/157 (55%), Gaps = 10/157 (6%)
Query 84 YEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVAD 143
Y DF+CPAC FE+ + T++ L + G + +Y + LD S+ +YSSR+A AA CVAD
Sbjct 135 YIDFICPACLQFEKAYNETLTSLRNEGKITVEYRPLGFLDRLSSTNYSSRSANAAACVAD 194
Query 144 ESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGK---YIE 200
++ E + + LF D QPAE G D+ +L LA + G + C++ Y++
Sbjct 195 KAPEKYAEYVNVLF--DNQPAEGGAGLSDD-KLKSLASDIG--ADINSCVDDKTFRPYVK 249
Query 201 KVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIK 237
LA + TPTV V+G +W + L A+I+
Sbjct 250 YSTELAENTGITGTPTVFVDGK--KWDGASDLNAEIQ 284
>gi|111023378|ref|YP_706350.1| serine/threonine-protein kinase [Rhodococcus jostii RHA1]
gi|110822908|gb|ABG98192.1| possible serine/threonine-protein kinase [Rhodococcus jostii
RHA1]
Length=243
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/210 (32%), Positives = 100/210 (48%), Gaps = 13/210 (6%)
Query 26 IGGTTIVVVFAVVL--VFYIVTSRDDKKDGVAGPGDA-VRVT-SSKLVTQPGTSNPKAVV 81
+GG ++V+ +V+ V + + DG G ++ V+V V + G + V
Sbjct 20 LGGLAVLVIAVLVIGGVIWQSNRSKPRNDGYGGVQNSEVQVALQDDGVVRLGRPDAATTV 79
Query 82 SFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSAS-NQHYSSRAAAAAYC 140
+ED +CP C E G +++ VD G VA Y ++ LD S + YS+RA AA+ C
Sbjct 80 DLFEDPMCPYCAELENKNGQELAQAVDDGKVAVRYHVLNFLDQLSASGDYSTRAVAASEC 139
Query 141 VADESIE-AFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGKYI 199
VA+ A+ FHAALFS QP E G N L ++A +AG + CI +G +
Sbjct 140 VAETGDAVAYSAFHAALFSPSNQPKENGSSDHTNEELAQIAGDAGASDEAVQCITTGAKV 199
Query 200 EKVDGLA-------AAVNVHATPTVRVNGT 222
E+ A AA TP V +GT
Sbjct 200 EQARAHAEAGRQALAASGATGTPAVVKDGT 229
>gi|119962890|ref|YP_946723.1| DSBA-like thioredoxin domain-containing protein [Arthrobacter
aurescens TC1]
gi|119949749|gb|ABM08660.1| putative DSBA-like thioredoxin domain protein [Arthrobacter aurescens
TC1]
Length=301
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/148 (37%), Positives = 82/148 (56%), Gaps = 7/148 (4%)
Query 84 YEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVAD 143
Y DF+CP C FE +G +++ L + G ++ +Y + LD S +YSSRAA AA CV +
Sbjct 144 YIDFICPVCKQFESTYGESLTSLRNEGKISVEYRALGFLDRQSTTNYSSRAANAAACVVN 203
Query 144 ESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGK---YIE 200
S E + F LF + QPAE G DN L ++A E G + CI+S + +++
Sbjct 204 SSPEKYAEFFNLLFER--QPAEGGAGISDN-DLKKMATEIGAAN-IDSCIDSKQFRPWVK 259
Query 201 KVDGLAAAVNVHATPTVRVNGTEYEWST 228
AAA+ V TPTV ++G +++ T
Sbjct 260 VATQEAAAIGVTGTPTVFIDGKQWDGRT 287
>gi|343928382|ref|ZP_08767831.1| hypothetical protein GOALK_116_00160 [Gordonia alkanivorans NBRC
16433]
gi|343761710|dbj|GAA14757.1| hypothetical protein GOALK_116_00160 [Gordonia alkanivorans NBRC
16433]
Length=221
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/211 (32%), Positives = 98/211 (47%), Gaps = 22/211 (10%)
Query 26 IGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGD-AVRVTSSKLVTQPGTSNPKAVVSFY 84
+GG I+V+ +V+ + RD G D + +SS ++ P + ++ +
Sbjct 5 LGGIAILVIAGLVIGGIWWSGRDK------GTADQSALASSSTMIVGPENA---PLIDVF 55
Query 85 EDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSAS-NQHYSSRAAAAAYCVAD 143
ED LCP C +FE+ GP ++ V+ G + Y + LDS S YSSRAA A CVA
Sbjct 56 EDPLCPVCKLFEQQSGPAITAAVNEGKLRVRYHTLNFLDSKSATGDYSSRAAGALTCVAQ 115
Query 144 E-SIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGKYIEKV 202
E + + F RFH+ALF+ QPAE G + L LA E G CI + + +
Sbjct 116 EQNTDLFLRFHSALFAA--QPAEDGTGNITSPELARLATEQGATPATAKCITDNEKVAQA 173
Query 203 --------DGLAAAVNVHATPTVRVNGTEYE 225
D L A TP+V +G E
Sbjct 174 QQNAATSSDELKKAAGQVGTPSVLHDGKPVE 204
>gi|296394534|ref|YP_003659418.1| DSBA oxidoreductase [Segniliparus rotundus DSM 44985]
gi|296181681|gb|ADG98587.1| DSBA oxidoreductase [Segniliparus rotundus DSM 44985]
Length=267
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/218 (29%), Positives = 98/218 (45%), Gaps = 20/218 (9%)
Query 28 GTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAVVSFYEDF 87
GT ++V AV + + I + G P ++ G + AV+ YEDF
Sbjct 35 GTVVIVALAVGVWWGIKQQYKEDTPGKFEP----------VLASVGKPDAPAVIDVYEDF 84
Query 88 LCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILD-SASNQHYSSRAAAAAYCVADESI 146
+CPAC FE +G ++K V+ G + Y M+ L+ ++++ YSSRAA AA V ++
Sbjct 85 MCPACAEFEGAYGEQIAKAVEDGKLRVQYHMLNFLNRNSASGDYSSRAAGAALAVFQKAP 144
Query 147 EAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGKYIE------ 200
+ F FH +FS D QP E + N +L ++A G D I SG ++
Sbjct 145 DKFLAFHTKMFSADTQPREGSESDLSNDQLAKIAESVGAGAAAAD-IRSGADVKAAAGSA 203
Query 201 --KVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKI 236
+ L + +TPTV + W + KI
Sbjct 204 QAAIKQLQSLTKSVSTPTVLKDNKPLNWQRDDQWLQKI 241
>gi|302865693|ref|YP_003834330.1| DSBA oxidoreductase [Micromonospora aurantiaca ATCC 27029]
gi|302568552|gb|ADL44754.1| DSBA oxidoreductase [Micromonospora aurantiaca ATCC 27029]
Length=238
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/216 (32%), Positives = 104/216 (49%), Gaps = 18/216 (8%)
Query 29 TTIVVVFAVVL---VFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAVVSFYE 85
T+I V +V+ + + V S + A PG T L T P T + YE
Sbjct 30 TSIAAVLVLVIAGGIGWAVHSSQKSDEFTAPPGANNAGTGIVLGTGPVT------IDLYE 83
Query 86 DFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADES 145
D+LCPAC F++ G T+++LV G + VA L+ S YS+R++AA+ C A
Sbjct 84 DYLCPACKQFQQINGETLNQLVSEGKAKLVFHPVAFLNRFSTTEYSTRSSAASGCAAQGG 143
Query 146 IEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGV-VGKVPDCINSGKY---IEK 201
FR F LF+K QP E G N L+++ G+ + C++ G Y E
Sbjct 144 --KFREFTDQLFAK--QPPEGGAGL-SNDELVDIGAGVGLNRDEFASCVSDGTYRSWTEH 198
Query 202 VDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIK 237
V A+ V TPT++VNG+E + +P + + ++
Sbjct 199 VTDEASKSGVTDTPTIKVNGSELQDRSPEGIKSAVE 234
Lambda K H
0.318 0.133 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 374688414660
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40