BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2975c
Length=84
Score E
Sequences producing significant alignments: (Bits) Value
gi|167970005|ref|ZP_02552282.1| ATP-dependent DNA helicase recG ... 163 7e-39
gi|289575681|ref|ZP_06455908.1| DAK2 domain-containing protein [... 162 1e-38
gi|15842528|ref|NP_337565.1| hypothetical protein MT3052.1 [Myco... 162 2e-38
gi|31794151|ref|NP_856644.1| hypothetical protein Mb2999c [Mycob... 161 3e-38
gi|15610112|ref|NP_217491.1| hypothetical protein Rv2975c [Mycob... 160 4e-38
gi|289571172|ref|ZP_06451399.1| conserved hypothetical protein [... 147 5e-34
gi|306798911|ref|ZP_07437213.1| ATP-dependent DNA helicase recG ... 136 1e-30
gi|333991318|ref|YP_004523932.1| hypothetical protein JDM601_267... 110 1e-22
gi|41409108|ref|NP_961944.1| hypothetical protein MAP3010c [Myco... 106 9e-22
gi|336459134|gb|EGO38082.1| DAK2 domain fusion protein YloV [Myc... 106 9e-22
gi|118466231|ref|YP_882990.1| DAK2 domain-containing protein [My... 106 1e-21
gi|254776243|ref|ZP_05217759.1| DAK2 domain-containing protein [... 106 1e-21
gi|240168965|ref|ZP_04747624.1| hypothetical alanine rich protei... 105 2e-21
gi|342858206|ref|ZP_08714861.1| DAK2 domain-containing protein [... 105 2e-21
gi|183981754|ref|YP_001850045.1| hypothetical protein MMAR_1741 ... 101 4e-20
gi|296171353|ref|ZP_06852709.1| glycerone kinase [Mycobacterium ... 98.2 4e-19
gi|118472479|ref|YP_886742.1| dihydroxyacetone kinase [Mycobacte... 93.6 1e-17
gi|120403146|ref|YP_952975.1| Dak phosphatase [Mycobacterium van... 90.5 7e-17
gi|254821177|ref|ZP_05226178.1| hypothetical protein MintA_14667... 87.4 6e-16
gi|169630360|ref|YP_001704009.1| putative phosphatase/kinase [My... 82.0 3e-14
gi|108798903|ref|YP_639100.1| Dak phosphatase [Mycobacterium sp.... 82.0 3e-14
gi|126434503|ref|YP_001070194.1| Dak phosphatase [Mycobacterium ... 81.3 4e-14
gi|315445122|ref|YP_004078001.1| kinase, dihydroxyacetone kinase... 79.3 2e-13
gi|145224792|ref|YP_001135470.1| Dak phosphatase [Mycobacterium ... 79.3 2e-13
gi|226365975|ref|YP_002783758.1| hypothetical protein ROP_65660 ... 73.6 9e-12
gi|111023474|ref|YP_706446.1| kinase related to hydroxyacetone k... 73.6 1e-11
gi|319951169|ref|ZP_08025014.1| hypothetical protein ES5_16053 [... 68.9 2e-10
gi|312140467|ref|YP_004007803.1| glycerone kinase family protein... 65.5 3e-09
gi|306835967|ref|ZP_07468959.1| glycerone kinase [Corynebacteriu... 65.1 3e-09
gi|227501789|ref|ZP_03931838.1| kinase [Corynebacterium accolens... 65.1 3e-09
gi|325675914|ref|ZP_08155598.1| glycerone kinase [Rhodococcus eq... 65.1 4e-09
gi|229491417|ref|ZP_04385241.1| Dak phosphatase [Rhodococcus ery... 64.3 5e-09
gi|226305910|ref|YP_002765870.1| hypothetical protein RER_24230 ... 64.3 6e-09
gi|256397126|ref|YP_003118690.1| Dak phosphatase [Catenulispora ... 63.9 8e-09
gi|145295466|ref|YP_001138287.1| hypothetical protein cgR_1399 [... 62.0 3e-08
gi|344043472|gb|EGV39165.1| hypothetical protein CgS9114_14837 [... 62.0 3e-08
gi|256379971|ref|YP_003103631.1| Dak phosphatase [Actinosynnema ... 62.0 3e-08
gi|311740525|ref|ZP_07714352.1| glycerone kinase [Corynebacteriu... 61.6 4e-08
gi|255324608|ref|ZP_05365725.1| glycerone kinase [Corynebacteriu... 61.6 4e-08
gi|225022639|ref|ZP_03711831.1| hypothetical protein CORMATOL_02... 61.6 4e-08
gi|62390207|ref|YP_225609.1| kinase related to dihydroxyacetone ... 60.8 6e-08
gi|305682055|ref|ZP_07404859.1| DAK2 domain fusion protein YloV ... 60.8 6e-08
gi|237785786|ref|YP_002906491.1| hypothetical protein ckrop_1203... 60.5 8e-08
gi|257054976|ref|YP_003132808.1| putative kinase, dihydroxyaceto... 60.5 8e-08
gi|343926825|ref|ZP_08766318.1| hypothetical protein GOALK_072_0... 59.7 1e-07
gi|23308840|ref|NP_600545.2| kinase [Corynebacterium glutamicum ... 59.7 1e-07
gi|333920828|ref|YP_004494409.1| Dak phosphatase [Amycolicicoccu... 58.9 3e-07
gi|296119648|ref|ZP_06838206.1| DAK2 domain protein [Corynebacte... 57.8 6e-07
gi|262182524|ref|ZP_06041945.1| hypothetical protein CaurA7_0088... 57.0 9e-07
gi|227832988|ref|YP_002834695.1| hypothetical protein cauri_1164... 57.0 9e-07
>gi|167970005|ref|ZP_02552282.1| ATP-dependent DNA helicase recG [Mycobacterium tuberculosis H37Ra]
Length=1293
Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/84 (99%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
+GTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD
Sbjct 1 MGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
Query 61 LHANSQADAEDVARVAAALAAGAR 84
LHANSQADAEDVARVAAALAAGAR
Sbjct 61 LHANSQADAEDVARVAAALAAGAR 84
>gi|289575681|ref|ZP_06455908.1| DAK2 domain-containing protein [Mycobacterium tuberculosis K85]
gi|298526444|ref|ZP_07013853.1| DAK2 domain-containing protein [Mycobacterium tuberculosis 94_M4241A]
gi|289540112|gb|EFD44690.1| DAK2 domain-containing protein [Mycobacterium tuberculosis K85]
gi|298496238|gb|EFI31532.1| DAK2 domain-containing protein [Mycobacterium tuberculosis 94_M4241A]
Length=561
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/83 (100%), Positives = 83/83 (100%), Gaps = 0/83 (0%)
Query 1 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD
Sbjct 9 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 68
Query 61 LHANSQADAEDVARVAAALAAGA 83
LHANSQADAEDVARVAAALAAGA
Sbjct 69 LHANSQADAEDVARVAAALAAGA 91
>gi|15842528|ref|NP_337565.1| hypothetical protein MT3052.1 [Mycobacterium tuberculosis CDC1551]
gi|308380533|ref|ZP_07490263.2| ATP-dependent DNA helicase recG [Mycobacterium tuberculosis SUMu011]
gi|13882838|gb|AAK47379.1| hypothetical protein MT3052.1 [Mycobacterium tuberculosis CDC1551]
gi|308361294|gb|EFP50145.1| ATP-dependent DNA helicase recG [Mycobacterium tuberculosis SUMu011]
Length=92
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD
Sbjct 9 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 68
Query 61 LHANSQADAEDVARVAAALAAGAR 84
LHANSQADAEDVARVAAALAAGAR
Sbjct 69 LHANSQADAEDVARVAAALAAGAR 92
>gi|31794151|ref|NP_856644.1| hypothetical protein Mb2999c [Mycobacterium bovis AF2122/97]
gi|121638856|ref|YP_979080.1| hypothetical protein BCG_2996c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224991348|ref|YP_002646037.1| hypothetical alanine rich protein [Mycobacterium bovis BCG str.
Tokyo 172]
19 more sequence titles
Length=553
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/83 (99%), Positives = 83/83 (100%), Gaps = 0/83 (0%)
Query 1 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
+GTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD
Sbjct 1 MGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
Query 61 LHANSQADAEDVARVAAALAAGA 83
LHANSQADAEDVARVAAALAAGA
Sbjct 61 LHANSQADAEDVARVAAALAAGA 83
>gi|15610112|ref|NP_217491.1| hypothetical protein Rv2975c [Mycobacterium tuberculosis H37Rv]
gi|148662824|ref|YP_001284347.1| hypothetical protein MRA_3003 [Mycobacterium tuberculosis H37Ra]
gi|253797933|ref|YP_003030934.1| hypothetical protein TBMG_00995 [Mycobacterium tuberculosis KZN
1435]
32 more sequence titles
Length=84
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/84 (99%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
+GTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD
Sbjct 1 MGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
Query 61 LHANSQADAEDVARVAAALAAGAR 84
LHANSQADAEDVARVAAALAAGAR
Sbjct 61 LHANSQADAEDVARVAAALAAGAR 84
>gi|289571172|ref|ZP_06451399.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289544926|gb|EFD48574.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|326904588|gb|EGE51521.1| hypothetical protein TBPG_02496 [Mycobacterium tuberculosis W-148]
Length=546
Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/76 (99%), Positives = 76/76 (100%), Gaps = 0/76 (0%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQA 67
+DASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQA
Sbjct 1 MDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQA 60
Query 68 DAEDVARVAAALAAGA 83
DAEDVARVAAALAAGA
Sbjct 61 DAEDVARVAAALAAGA 76
>gi|306798911|ref|ZP_07437213.1| ATP-dependent DNA helicase recG [Mycobacterium tuberculosis SUMu006]
gi|308340892|gb|EFP29743.1| ATP-dependent DNA helicase recG [Mycobacterium tuberculosis SUMu006]
Length=84
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/71 (98%), Positives = 70/71 (99%), Gaps = 0/71 (0%)
Query 1 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
+GTADRPLDASALRDWAHAVVSDLILHIDEINRLNVF VADSDTGVNMLFTMRAAVVEAD
Sbjct 1 MGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFLVADSDTGVNMLFTMRAAVVEAD 60
Query 61 LHANSQADAED 71
LHANSQADAED
Sbjct 61 LHANSQADAED 71
>gi|333991318|ref|YP_004523932.1| hypothetical protein JDM601_2678 [Mycobacterium sp. JDM601]
gi|333487286|gb|AEF36678.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=554
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/83 (68%), Positives = 66/83 (80%), Gaps = 4/83 (4%)
Query 1 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
VG DR LDA+ LRDWAH V DLI H DEIN+LNVFPVADSDTG NMLFTMR+A+ E
Sbjct 3 VGNPDRRLDAATLRDWAHTAVGDLITHTDEINQLNVFPVADSDTGTNMLFTMRSALAE-- 60
Query 61 LHANSQADAEDVARVAAALAAGA 83
AN++A + +VARVAAAL++GA
Sbjct 61 --ANTEAASGEVARVAAALSSGA 81
>gi|41409108|ref|NP_961944.1| hypothetical protein MAP3010c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397928|gb|AAS05558.1| hypothetical protein MAP_3010c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=575
Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/79 (73%), Positives = 62/79 (79%), Gaps = 4/79 (5%)
Query 5 DRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHAN 64
DRPLDA+ALRDWAH VSDLI HIDEINRLNVFPVADSDTG NMLFTMR+A+ A+L A
Sbjct 18 DRPLDAAALRDWAHTAVSDLITHIDEINRLNVFPVADSDTGANMLFTMRSAL--AELQAA 75
Query 65 SQADAEDVARVAAALAAGA 83
VAR AAAL+ GA
Sbjct 76 GGPGC--VARAAAALSTGA 92
>gi|336459134|gb|EGO38082.1| DAK2 domain fusion protein YloV [Mycobacterium avium subsp. paratuberculosis
S397]
Length=575
Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/79 (73%), Positives = 62/79 (79%), Gaps = 4/79 (5%)
Query 5 DRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHAN 64
DRPLDA+ALRDWAH VSDLI HIDEINRLNVFPVADSDTG NMLFTMR+A+ A+L A
Sbjct 18 DRPLDAAALRDWAHTAVSDLITHIDEINRLNVFPVADSDTGANMLFTMRSAL--AELQAA 75
Query 65 SQADAEDVARVAAALAAGA 83
VAR AAAL+ GA
Sbjct 76 GGPGC--VARAAAALSTGA 92
>gi|118466231|ref|YP_882990.1| DAK2 domain-containing protein [Mycobacterium avium 104]
gi|118167518|gb|ABK68415.1| DAK2 domain protein [Mycobacterium avium 104]
Length=575
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/79 (73%), Positives = 62/79 (79%), Gaps = 4/79 (5%)
Query 5 DRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHAN 64
DRPLDA+ALRDWAH VSDLI HIDEINRLNVFPVADSDTG NMLFTMR+A+ A+L A
Sbjct 18 DRPLDAAALRDWAHTAVSDLITHIDEINRLNVFPVADSDTGANMLFTMRSAL--AELQAA 75
Query 65 SQADAEDVARVAAALAAGA 83
VAR AAAL+ GA
Sbjct 76 GGPGC--VARAAAALSTGA 92
>gi|254776243|ref|ZP_05217759.1| DAK2 domain-containing protein [Mycobacterium avium subsp. avium
ATCC 25291]
Length=151
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/79 (73%), Positives = 62/79 (79%), Gaps = 4/79 (5%)
Query 5 DRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHAN 64
DRPLDA+ALRDWAH VSDLI HIDEINRLNVFPVADSDTG NMLFTMR+A+ A+L A
Sbjct 18 DRPLDAAALRDWAHTAVSDLITHIDEINRLNVFPVADSDTGANMLFTMRSAL--AELQAA 75
Query 65 SQADAEDVARVAAALAAGA 83
VAR AAAL+ GA
Sbjct 76 GGPGC--VARAAAALSTGA 92
>gi|240168965|ref|ZP_04747624.1| hypothetical alanine rich protein [Mycobacterium kansasii ATCC
12478]
Length=556
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 54/60 (90%), Gaps = 0/60 (0%)
Query 1 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
VGT+ R LDASALRDWAH VVSDLI HIDEINRLNVFPVAD+DTG NMLFTMRAA+ EAD
Sbjct 3 VGTSGRLLDASALRDWAHIVVSDLITHIDEINRLNVFPVADADTGANMLFTMRAALAEAD 62
>gi|342858206|ref|ZP_08714861.1| DAK2 domain-containing protein [Mycobacterium colombiense CECT
3035]
gi|342133910|gb|EGT87090.1| DAK2 domain-containing protein [Mycobacterium colombiense CECT
3035]
Length=571
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/81 (70%), Positives = 63/81 (78%), Gaps = 1/81 (1%)
Query 3 TADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLH 62
+ DR LDA LRDWAH VSDLI HIDEINRLNVFPVADSDTG NMLFTMR+A+ EA +
Sbjct 14 SQDRLLDAITLRDWAHTAVSDLITHIDEINRLNVFPVADSDTGANMLFTMRSALAEAKVG 73
Query 63 ANSQADAEDVARVAAALAAGA 83
A + + VAR AAAL+AGA
Sbjct 74 AGADG-STCVARTAAALSAGA 93
>gi|183981754|ref|YP_001850045.1| hypothetical protein MMAR_1741 [Mycobacterium marinum M]
gi|183175080|gb|ACC40190.1| conserved hypothetical alanine rich membrane protein [Mycobacterium
marinum M]
Length=564
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/60 (77%), Positives = 52/60 (87%), Gaps = 0/60 (0%)
Query 1 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
+GT +RPLDA ALRDWAH VSDLI H+DEINRLNVFPVADSDTG NMLFTMR+A+ + D
Sbjct 1 MGTTERPLDALALRDWAHTGVSDLITHLDEINRLNVFPVADSDTGANMLFTMRSALAQVD 60
>gi|296171353|ref|ZP_06852709.1| glycerone kinase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894184|gb|EFG73942.1| glycerone kinase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=604
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/67 (68%), Positives = 53/67 (80%), Gaps = 0/67 (0%)
Query 1 VGTADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
+G ++R LD LRDWAH VS+LI HIDEINRLNVFPVADSDTG NMLFTMR+A+ EA+
Sbjct 42 LGPSERLLDGVTLRDWAHTAVSELITHIDEINRLNVFPVADSDTGANMLFTMRSALAEAN 101
Query 61 LHANSQA 67
NS+
Sbjct 102 AGLNSEG 108
>gi|118472479|ref|YP_886742.1| dihydroxyacetone kinase [Mycobacterium smegmatis str. MC2 155]
gi|118173766|gb|ABK74662.1| dihydroxyacetone kinase [Mycobacterium smegmatis str. MC2 155]
Length=554
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/72 (67%), Positives = 53/72 (74%), Gaps = 5/72 (6%)
Query 6 RPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANS 65
R LDASALRDWAH V DLI H DEINRLNVFPVAD+DTG NMLFTMR+A AD +
Sbjct 4 RRLDASALRDWAHTAVGDLITHTDEINRLNVFPVADADTGTNMLFTMRSAWAHADAQSGG 63
Query 66 QADAEDVARVAA 77
DVA+VA+
Sbjct 64 -----DVAQVAS 70
>gi|120403146|ref|YP_952975.1| Dak phosphatase [Mycobacterium vanbaalenii PYR-1]
gi|119955964|gb|ABM12969.1| Dak phosphatase [Mycobacterium vanbaalenii PYR-1]
Length=551
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 47/55 (86%), Gaps = 0/55 (0%)
Query 6 RPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
R LDASALR WAHA V+DLI H DEIN+LNVFPVAD+DTG NMLFTMRAA EAD
Sbjct 4 RRLDASALRHWAHAAVADLISHTDEINQLNVFPVADADTGTNMLFTMRAAWAEAD 58
>gi|254821177|ref|ZP_05226178.1| hypothetical protein MintA_14667 [Mycobacterium intracellulare
ATCC 13950]
Length=549
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/46 (85%), Positives = 41/46 (90%), Gaps = 0/46 (0%)
Query 13 LRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVE 58
LRDWAH VSDLI HIDEINRLNVFPVADSDTG NMLFTMR+A+ E
Sbjct 3 LRDWAHTAVSDLITHIDEINRLNVFPVADSDTGANMLFTMRSALAE 48
>gi|169630360|ref|YP_001704009.1| putative phosphatase/kinase [Mycobacterium abscessus ATCC 19977]
gi|169242327|emb|CAM63355.1| Putative phosphatase/kinase [Mycobacterium abscessus]
Length=551
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/76 (62%), Positives = 55/76 (73%), Gaps = 4/76 (5%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQA 67
LD++AL DWA A V LI DEINRLNVFPVAD+DTG NMLFTMR+AV A+ +
Sbjct 6 LDSAALLDWARASVEGLISRSDEINRLNVFPVADADTGTNMLFTMRSAVNAAE----ALG 61
Query 68 DAEDVARVAAALAAGA 83
+ VA+VAAALA GA
Sbjct 62 EGATVAQVAAALARGA 77
>gi|108798903|ref|YP_639100.1| Dak phosphatase [Mycobacterium sp. MCS]
gi|119868018|ref|YP_937970.1| Dak phosphatase [Mycobacterium sp. KMS]
gi|108769322|gb|ABG08044.1| Dak phosphatase [Mycobacterium sp. MCS]
gi|119694107|gb|ABL91180.1| Dak phosphatase [Mycobacterium sp. KMS]
Length=547
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/48 (78%), Positives = 40/48 (84%), Gaps = 0/48 (0%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAA 55
LDA+ LRDWAHA V DLI H DEIN LNVFPV D+DTG NMLFTMR+A
Sbjct 6 LDATVLRDWAHAAVEDLISHTDEINGLNVFPVPDADTGTNMLFTMRSA 53
>gi|126434503|ref|YP_001070194.1| Dak phosphatase [Mycobacterium sp. JLS]
gi|126234303|gb|ABN97703.1| Dak phosphatase [Mycobacterium sp. JLS]
Length=547
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/69 (61%), Positives = 49/69 (72%), Gaps = 6/69 (8%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQA 67
LDA+ LRDWAH+ V DLI H DEIN LNVFPV D+DTG NMLFTMR+A + +Q
Sbjct 6 LDATVLRDWAHSAVEDLISHTDEINGLNVFPVPDADTGTNMLFTMRSA------WSRAQD 59
Query 68 DAEDVARVA 76
A DVA V+
Sbjct 60 CAGDVAEVS 68
>gi|315445122|ref|YP_004078001.1| kinase, dihydroxyacetone kinase [Mycobacterium sp. Spyr1]
gi|315263425|gb|ADU00167.1| predicted kinase, dihydroxyacetone kinase [Mycobacterium sp.
Spyr1]
Length=547
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/48 (78%), Positives = 39/48 (82%), Gaps = 0/48 (0%)
Query 6 RPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMR 53
R LDAS LR WAH V+ LI H DEINRLNVFPVAD+DTG NMLFTMR
Sbjct 4 RRLDASTLRRWAHDAVAALISHTDEINRLNVFPVADADTGTNMLFTMR 51
>gi|145224792|ref|YP_001135470.1| Dak phosphatase [Mycobacterium gilvum PYR-GCK]
gi|145217278|gb|ABP46682.1| Dak phosphatase [Mycobacterium gilvum PYR-GCK]
Length=547
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/48 (78%), Positives = 39/48 (82%), Gaps = 0/48 (0%)
Query 6 RPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMR 53
R LDAS LR WAH V+ LI H DEINRLNVFPVAD+DTG NMLFTMR
Sbjct 4 RRLDASTLRRWAHDAVAALISHTDEINRLNVFPVADADTGTNMLFTMR 51
>gi|226365975|ref|YP_002783758.1| hypothetical protein ROP_65660 [Rhodococcus opacus B4]
gi|226244465|dbj|BAH54813.1| hypothetical protein [Rhodococcus opacus B4]
Length=561
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (64%), Gaps = 0/76 (0%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQA 67
+D L WA V+ L +EIN LNVFP+ DSDTG N+LFTMRAA+ D +A +
Sbjct 1 MDGRVLELWARTSVAGLERRCEEINSLNVFPIPDSDTGTNLLFTMRAALGAIDEYAGADG 60
Query 68 DAEDVARVAAALAAGA 83
+DV +VA ALA GA
Sbjct 61 GTKDVRQVAIALARGA 76
>gi|111023474|ref|YP_706446.1| kinase related to hydroxyacetone kinase [Rhodococcus jostii RHA1]
gi|110823004|gb|ABG98288.1| possible kinase related to hydroxyacetone kinase [Rhodococcus
jostii RHA1]
Length=568
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/77 (52%), Positives = 48/77 (63%), Gaps = 2/77 (2%)
Query 7 PLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQ 66
P+D L WA V+ L +EIN LNVFP+ DSDTG N+LFTMRAA+ D A S
Sbjct 6 PMDGRVLESWARTAVAGLEKRCEEINSLNVFPIPDSDTGTNLLFTMRAALGAIDEFAGS- 64
Query 67 ADAEDVARVAAALAAGA 83
+DV +VA ALA GA
Sbjct 65 -GTKDVRQVAIALARGA 80
>gi|319951169|ref|ZP_08025014.1| hypothetical protein ES5_16053 [Dietzia cinnamea P4]
gi|319435185|gb|EFV90460.1| hypothetical protein ES5_16053 [Dietzia cinnamea P4]
Length=189
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/82 (52%), Positives = 47/82 (58%), Gaps = 10/82 (12%)
Query 5 DRP--LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLH 62
DRP LDA L WA V L LH +EIN LNVFPV DSDTG N+L+TMRAAV
Sbjct 10 DRPSTLDAHGLLTWARRSVEMLALHREEINALNVFPVPDSDTGTNLLYTMRAAV------ 63
Query 63 ANSQADAEDVARVAAALAAGAR 84
+A+ ED AGAR
Sbjct 64 --DRAEGEDAWIAEGGGTAGAR 83
>gi|312140467|ref|YP_004007803.1| glycerone kinase family protein [Rhodococcus equi 103S]
gi|311889806|emb|CBH49123.1| putative glycerone kinase family protein [Rhodococcus equi 103S]
Length=559
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/78 (57%), Positives = 51/78 (66%), Gaps = 5/78 (6%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAV-VEADLHANSQ 66
+D SAL WA A V+ + DEIN LNVFPV D+DTG N+L TMRAAV A L A+ +
Sbjct 18 VDGSALYRWADACVTGIEKRCDEINDLNVFPVPDADTGTNLLATMRAAVRAAAPLSADGR 77
Query 67 -ADAEDVARVAAALAAGA 83
ADA VAR ALA GA
Sbjct 78 GADASAVAR---ALARGA 92
>gi|306835967|ref|ZP_07468959.1| glycerone kinase [Corynebacterium accolens ATCC 49726]
gi|304568133|gb|EFM43706.1| glycerone kinase [Corynebacterium accolens ATCC 49726]
Length=450
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 43/76 (57%), Gaps = 9/76 (11%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQA 67
LDA LR+WAH V +L EIN LNVFPV DSDTG NM TM AAV E +
Sbjct 7 LDAHGLRNWAHRAVGELSHRRAEINALNVFPVPDSDTGSNMAHTMEAAVAEVEKGGGD-- 64
Query 68 DAEDVARVAAALAAGA 83
VAAALA GA
Sbjct 65 -------VAAALAMGA 73
>gi|227501789|ref|ZP_03931838.1| kinase [Corynebacterium accolens ATCC 49725]
gi|227077814|gb|EEI15777.1| kinase [Corynebacterium accolens ATCC 49725]
Length=450
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 43/76 (57%), Gaps = 9/76 (11%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQA 67
LDA LR+WAH V +L EIN LNVFPV DSDTG NM TM AAV E +
Sbjct 7 LDAHGLRNWAHRAVGELSHRRAEINALNVFPVPDSDTGSNMAHTMEAAVAEVEKGGGD-- 64
Query 68 DAEDVARVAAALAAGA 83
VAAALA GA
Sbjct 65 -------VAAALAMGA 73
>gi|325675914|ref|ZP_08155598.1| glycerone kinase [Rhodococcus equi ATCC 33707]
gi|325553885|gb|EGD23563.1| glycerone kinase [Rhodococcus equi ATCC 33707]
Length=127
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/78 (57%), Positives = 51/78 (66%), Gaps = 5/78 (6%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAV-VEADLHANSQ 66
+D SAL WA A V+ + DEIN LNVFPV D+DTG N+L TMRAAV A L A+ +
Sbjct 8 VDGSALYRWADACVTGIEKRCDEINDLNVFPVPDADTGTNLLATMRAAVRAAAPLSADER 67
Query 67 -ADAEDVARVAAALAAGA 83
ADA VAR ALA GA
Sbjct 68 GADASAVAR---ALARGA 82
>gi|229491417|ref|ZP_04385241.1| Dak phosphatase [Rhodococcus erythropolis SK121]
gi|229321702|gb|EEN87499.1| Dak phosphatase [Rhodococcus erythropolis SK121]
Length=569
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/75 (51%), Positives = 43/75 (58%), Gaps = 3/75 (4%)
Query 9 DASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQAD 68
D LR WA V L EIN LNVFP+ DSDTG N+LFTMRAA+ A+ + D
Sbjct 16 DGHLLRRWARRAVDSLQKRRGEINSLNVFPIPDSDTGTNLLFTMRAALDSAE---TIEDD 72
Query 69 AEDVARVAAALAAGA 83
RVA ALA GA
Sbjct 73 VRSAGRVANALARGA 87
>gi|226305910|ref|YP_002765870.1| hypothetical protein RER_24230 [Rhodococcus erythropolis PR4]
gi|226185027|dbj|BAH33131.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=569
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/75 (51%), Positives = 43/75 (58%), Gaps = 3/75 (4%)
Query 9 DASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQAD 68
D LR WA V L EIN LNVFP+ DSDTG N+LFTMRAA+ A+ + D
Sbjct 16 DGHLLRRWARRAVDSLQKRRGEINSLNVFPIPDSDTGTNLLFTMRAALDSAE---TIEDD 72
Query 69 AEDVARVAAALAAGA 83
RVA ALA GA
Sbjct 73 VRSAGRVANALARGA 87
>gi|256397126|ref|YP_003118690.1| Dak phosphatase [Catenulispora acidiphila DSM 44928]
gi|256363352|gb|ACU76849.1| Dak phosphatase [Catenulispora acidiphila DSM 44928]
Length=601
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/77 (47%), Positives = 44/77 (58%), Gaps = 0/77 (0%)
Query 7 PLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQ 66
P+DA ALR WA A ++ L H +EI+ LNVFP+AD+DTG NM T AA D +
Sbjct 20 PVDAGALRRWAGAALAVLGRHREEIDALNVFPIADADTGTNMYLTFEAACRALDDRLTAP 79
Query 67 ADAEDVARVAAALAAGA 83
A V ALA GA
Sbjct 80 GPAPSVPEALQALAHGA 96
>gi|145295466|ref|YP_001138287.1| hypothetical protein cgR_1399 [Corynebacterium glutamicum R]
gi|140845386|dbj|BAF54385.1| hypothetical protein [Corynebacterium glutamicum R]
Length=567
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query 4 ADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHA 63
A + +DA+ + +WA V L EIN LNVFPV D+DTG NM +TM AA+ E A
Sbjct 37 ASQQMDAAGVLEWARTAVEQLSERRAEINALNVFPVPDADTGSNMTYTMTAALDE----A 92
Query 64 NSQADAEDVARVAAALAAGA 83
++ DVAR+ ALA G+
Sbjct 93 LKLGESGDVARITEALAVGS 112
>gi|344043472|gb|EGV39165.1| hypothetical protein CgS9114_14837 [Corynebacterium glutamicum
S9114]
Length=567
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query 4 ADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHA 63
A + +DA+ + +WA V L EIN LNVFPV D+DTG NM +TM AA+ E A
Sbjct 37 ASQQMDAAGVLEWARTAVEQLSERRAEINALNVFPVPDADTGSNMTYTMTAALDE----A 92
Query 64 NSQADAEDVARVAAALAAGA 83
++ DVAR+ ALA G+
Sbjct 93 LKLGESGDVARITEALAVGS 112
>gi|256379971|ref|YP_003103631.1| Dak phosphatase [Actinosynnema mirum DSM 43827]
gi|255924274|gb|ACU39785.1| Dak phosphatase [Actinosynnema mirum DSM 43827]
Length=545
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/49 (60%), Positives = 37/49 (76%), Gaps = 0/49 (0%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAV 56
LDASA+R WA A V L H ++I+R+NVFPVAD DTG N+L TM +A+
Sbjct 4 LDASAIRRWADACVRSLAAHREDIDRINVFPVADGDTGTNLLQTMSSAL 52
>gi|311740525|ref|ZP_07714352.1| glycerone kinase [Corynebacterium pseudogenitalium ATCC 33035]
gi|311304045|gb|EFQ80121.1| glycerone kinase [Corynebacterium pseudogenitalium ATCC 33035]
Length=447
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/53 (59%), Positives = 35/53 (67%), Gaps = 0/53 (0%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
LD+ +R+WA V +L DEIN LNVFPV DSDTG NM TM AAV E D
Sbjct 7 LDSHGMRNWATRAVGELAHRRDEINALNVFPVPDSDTGSNMAHTMEAAVAELD 59
>gi|255324608|ref|ZP_05365725.1| glycerone kinase [Corynebacterium tuberculostearicum SK141]
gi|255298514|gb|EET77814.1| glycerone kinase [Corynebacterium tuberculostearicum SK141]
Length=447
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/53 (59%), Positives = 35/53 (67%), Gaps = 0/53 (0%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
LD+ +R+WA V +L DEIN LNVFPV DSDTG NM TM AAV E D
Sbjct 7 LDSHGMRNWATRAVGELAHRRDEINALNVFPVPDSDTGSNMAHTMEAAVAELD 59
>gi|225022639|ref|ZP_03711831.1| hypothetical protein CORMATOL_02682 [Corynebacterium matruchotii
ATCC 33806]
gi|224944547|gb|EEG25756.1| hypothetical protein CORMATOL_02682 [Corynebacterium matruchotii
ATCC 33806]
Length=608
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/77 (47%), Positives = 47/77 (62%), Gaps = 4/77 (5%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD-LHANSQ 66
LD AL W V++L+ EIN+LNVFPV D+DTG NM TM AA+ E + L A Q
Sbjct 7 LDGPALHRWLTRAVAELVARRAEINKLNVFPVPDADTGSNMAHTMEAALAEVNSLPAAHQ 66
Query 67 ADAEDVARVAAALAAGA 83
D+ ++ AA+A GA
Sbjct 67 C---DITKLTAAIAVGA 80
>gi|62390207|ref|YP_225609.1| kinase related to dihydroxyacetone kinase [Corynebacterium glutamicum
ATCC 13032]
gi|41325543|emb|CAF20023.1| Predicted kinase related to dihydroxyacetone kinase [Corynebacterium
glutamicum ATCC 13032]
Length=567
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (59%), Gaps = 4/80 (5%)
Query 4 ADRPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHA 63
A + +DA+ + +WA V L EIN LNVFPV D+DTG NM +TM AA+ E A
Sbjct 37 ASQQMDAAGVLEWARTAVEQLSERRAEINALNVFPVPDADTGSNMTYTMTAALDE----A 92
Query 64 NSQADAEDVARVAAALAAGA 83
+ DVAR+ ALA G+
Sbjct 93 LKLGELGDVARITEALAVGS 112
>gi|305682055|ref|ZP_07404859.1| DAK2 domain fusion protein YloV [Corynebacterium matruchotii
ATCC 14266]
gi|305658528|gb|EFM48031.1| DAK2 domain fusion protein YloV [Corynebacterium matruchotii
ATCC 14266]
Length=602
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/77 (46%), Positives = 47/77 (62%), Gaps = 4/77 (5%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEA-DLHANSQ 66
+D AL W V++L+ EIN+LNVFPV D+DTG NM TM AA+ E +L A Q
Sbjct 1 MDGPALHRWLTRAVAELVARRAEINKLNVFPVPDADTGSNMAHTMEAALAEVNNLPAAHQ 60
Query 67 ADAEDVARVAAALAAGA 83
D+ ++ AA+A GA
Sbjct 61 C---DITKLTAAIAVGA 74
>gi|237785786|ref|YP_002906491.1| hypothetical protein ckrop_1203 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758698|gb|ACR17948.1| hypothetical protein ckrop_1203 [Corynebacterium kroppenstedtii
DSM 44385]
Length=601
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/49 (58%), Positives = 34/49 (70%), Gaps = 0/49 (0%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAV 56
+D++ L+ WA A L +EINRLNVFPV DSDTG NM FTM +AV
Sbjct 9 IDSTTLQRWARACAHTLARQKEEINRLNVFPVPDSDTGSNMAFTMASAV 57
>gi|257054976|ref|YP_003132808.1| putative kinase, dihydroxyacetone kinase [Saccharomonospora viridis
DSM 43017]
gi|256584848|gb|ACU95981.1| predicted kinase, dihydroxyacetone kinase [Saccharomonospora
viridis DSM 43017]
Length=554
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 0/50 (0%)
Query 6 RPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAA 55
R LDA A+RDWA A V DL EI+ +NV+PVADSDTG N+L TM AA
Sbjct 2 RALDAEAVRDWAEACVRDLRALRGEIDDINVYPVADSDTGSNLLHTMTAA 51
>gi|343926825|ref|ZP_08766318.1| hypothetical protein GOALK_072_00470 [Gordonia alkanivorans NBRC
16433]
gi|343763185|dbj|GAA13244.1| hypothetical protein GOALK_072_00470 [Gordonia alkanivorans NBRC
16433]
Length=549
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/48 (59%), Positives = 31/48 (65%), Gaps = 0/48 (0%)
Query 6 RPLDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMR 53
R ++ LRDWA V L EIN LNVFP+ DSDTG NMLFTMR
Sbjct 4 RTINPQLLRDWARVCVDRLEESRGEINDLNVFPIPDSDTGSNMLFTMR 51
>gi|23308840|ref|NP_600545.2| kinase [Corynebacterium glutamicum ATCC 13032]
gi|21324093|dbj|BAB98718.1| Predicted kinase related to dihydroxyacetone kinase [Corynebacterium
glutamicum ATCC 13032]
Length=527
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/76 (47%), Positives = 45/76 (60%), Gaps = 4/76 (5%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEADLHANSQA 67
+DA+ + +WA V L EIN LNVFPV D+DTG NM +TM AA+ E A
Sbjct 1 MDAAGVLEWARTAVEQLSERRAEINALNVFPVPDADTGSNMTYTMTAALDE----ALKLG 56
Query 68 DAEDVARVAAALAAGA 83
+ DVAR+ ALA G+
Sbjct 57 ELGDVARITEALAVGS 72
>gi|333920828|ref|YP_004494409.1| Dak phosphatase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483049|gb|AEF41609.1| Dak phosphatase [Amycolicicoccus subflavus DQS3-9A1]
Length=555
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/45 (67%), Positives = 32/45 (72%), Gaps = 0/45 (0%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTM 52
LDA AL WA A VS L DEIN LNVFP+ADSDTG N+ FTM
Sbjct 8 LDAHALLRWAAACVSGLERRRDEINVLNVFPIADSDTGTNLHFTM 52
>gi|296119648|ref|ZP_06838206.1| DAK2 domain protein [Corynebacterium ammoniagenes DSM 20306]
gi|295967531|gb|EFG80798.1| DAK2 domain protein [Corynebacterium ammoniagenes DSM 20306]
Length=448
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 36/53 (68%), Gaps = 0/53 (0%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
+DA L WA V++L L E+N+LNVFPV D+DTG NM TM AA+ EAD
Sbjct 14 IDAPTLHAWAKRSVAELSLRRAELNQLNVFPVPDADTGSNMAHTMEAALAEAD 66
>gi|262182524|ref|ZP_06041945.1| hypothetical protein CaurA7_00889 [Corynebacterium aurimucosum
ATCC 700975]
Length=472
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
LDA L +WA V +L EIN LNVFPV DSDTG NM TM +A+ EA+
Sbjct 7 LDARGLHEWAARTVEELQRRRVEINALNVFPVPDSDTGSNMAHTMESALAEAN 59
>gi|227832988|ref|YP_002834695.1| hypothetical protein cauri_1164 [Corynebacterium aurimucosum
ATCC 700975]
gi|227454004|gb|ACP32757.1| hypothetical protein cauri_1164 [Corynebacterium aurimucosum
ATCC 700975]
Length=486
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 8 LDASALRDWAHAVVSDLILHIDEINRLNVFPVADSDTGVNMLFTMRAAVVEAD 60
LDA L +WA V +L EIN LNVFPV DSDTG NM TM +A+ EA+
Sbjct 21 LDARGLHEWAARTVEELQRRRVEINALNVFPVPDSDTGSNMAHTMESALAEAN 73
Lambda K H
0.319 0.129 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131923386480
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40