BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2978c
Length=459
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610115|ref|NP_217494.1| transposase [Mycobacterium tubercul... 929 0.0
gi|340627967|ref|YP_004746419.1| putative transposase [Mycobacte... 926 0.0
gi|339632984|ref|YP_004724626.1| transposase [Mycobacterium afri... 926 0.0
gi|339299426|gb|AEJ51536.1| transposase [Mycobacterium tuberculo... 925 0.0
gi|289575685|ref|ZP_06455912.1| transposase [Mycobacterium tuber... 925 0.0
gi|340628796|ref|YP_004747248.1| putative transposase [Mycobacte... 805 0.0
gi|15609928|ref|NP_217307.1| transposase [Mycobacterium tubercul... 804 0.0
gi|340625715|ref|YP_004744167.1| putative transposase [Mycobacte... 803 0.0
gi|148823979|ref|YP_001288733.1| transposase [Mycobacterium tube... 801 0.0
gi|289448449|ref|ZP_06438193.1| transposase [Mycobacterium tuber... 801 0.0
gi|15842329|ref|NP_337366.1| IS1602 transposase [Mycobacterium t... 801 0.0
gi|289746594|ref|ZP_06505972.1| transposase [Mycobacterium tuber... 799 0.0
gi|15610022|ref|NP_217401.1| transposase [Mycobacterium tubercul... 768 0.0
gi|289553326|ref|ZP_06442536.1| transposase [Mycobacterium tuber... 768 0.0
gi|308373566|ref|ZP_07432874.2| transposase [Mycobacterium tuber... 763 0.0
gi|167969513|ref|ZP_02551790.1| transposase [Mycobacterium tuber... 753 0.0
gi|308374721|ref|ZP_07437115.2| transposase [Mycobacterium tuber... 750 0.0
gi|289759006|ref|ZP_06518384.1| conserved hypothetical protein [... 741 0.0
gi|31794061|ref|NP_856554.1| putative transposase [Mycobacterium... 739 0.0
gi|289444440|ref|ZP_06434184.1| transposase [Mycobacterium tuber... 736 0.0
gi|339295723|gb|AEJ47834.1| hypothetical protein CCDC5079_2644 [... 726 0.0
gi|294994021|ref|ZP_06799712.1| transposase [Mycobacterium tuber... 649 0.0
gi|15843451|ref|NP_338488.1| IS1537 transposase [Mycobacterium t... 646 0.0
gi|148825034|ref|YP_001289788.1| transposase [Mycobacterium tube... 645 0.0
gi|15610963|ref|NP_218344.1| transposase [Mycobacterium tubercul... 645 0.0
gi|167969942|ref|ZP_02552219.1| IS1537 transposase [Mycobacteriu... 644 0.0
gi|289441265|ref|ZP_06431009.1| transposase [Mycobacterium tuber... 644 0.0
gi|289751448|ref|ZP_06510826.1| transposase [Mycobacterium tuber... 540 3e-151
gi|289758918|ref|ZP_06518296.1| predicted protein [Mycobacterium... 434 1e-119
gi|50953767|ref|YP_061206.1| truncated IS1536 transposase [Mycob... 415 1e-113
gi|15607746|ref|NP_215120.1| hypothetical protein Rv0606 [Mycoba... 414 1e-113
gi|339295640|gb|AEJ47751.1| putative transposase [Mycobacterium ... 406 4e-111
gi|289446159|ref|ZP_06435903.1| transposase [Mycobacterium tuber... 370 2e-100
gi|289441995|ref|ZP_06431739.1| transposase [Mycobacterium tuber... 363 3e-98
gi|340628251|ref|YP_004746703.1| IS1539 transposase [Mycobacteri... 296 7e-78
gi|240171119|ref|ZP_04749778.1| putative transposase [Mycobacter... 285 8e-75
gi|296165345|ref|ZP_06847886.1| transposase [Mycobacterium paras... 285 9e-75
gi|32455749|ref|NP_862583.1| hypothetical protein pCLPp16 [Mycob... 280 3e-73
gi|339295639|gb|AEJ47750.1| transposase [Mycobacterium tuberculo... 273 6e-71
gi|289573552|ref|ZP_06453779.1| transposase [Mycobacterium tuber... 267 2e-69
gi|167967048|ref|ZP_02549325.1| transposase [Mycobacterium tuber... 267 3e-69
gi|15608062|ref|NP_215437.1| transposase [Mycobacterium tubercul... 266 4e-69
gi|289442337|ref|ZP_06432081.1| transposase [Mycobacterium tuber... 266 4e-69
gi|289757008|ref|ZP_06516386.1| transposase [Mycobacterium tuber... 266 6e-69
gi|158316871|ref|YP_001509379.1| IS605 family transposase OrfB [... 265 2e-68
gi|289744653|ref|ZP_06504031.1| transposase [Mycobacterium tuber... 264 2e-68
gi|86742113|ref|YP_482513.1| transposase [Frankia sp. CcI3] >gi|... 263 7e-68
gi|295696698|ref|YP_003589936.1| transposase, IS605 OrfB family ... 262 8e-68
gi|158312542|ref|YP_001505050.1| IS605 family transposase OrfB [... 261 2e-67
gi|158317425|ref|YP_001509933.1| IS605 family transposase OrfB [... 261 2e-67
>gi|15610115|ref|NP_217494.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|15842532|ref|NP_337569.1| IS1538 transposase [Mycobacterium tuberculosis CDC1551]
gi|31794154|ref|NP_856647.1| resolvase [Mycobacterium bovis AF2122/97]
70 more sequence titles
Length=459
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/459 (100%), Positives = 459/459 (100%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV
Sbjct 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA
Sbjct 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV
Sbjct 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA
Sbjct 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
>gi|340627967|ref|YP_004746419.1| putative transposase [Mycobacterium canettii CIPT 140010059]
gi|340006157|emb|CCC45331.1| putative transposase [Mycobacterium canettii CIPT 140010059]
Length=459
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/459 (99%), Positives = 458/459 (99%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV
Sbjct 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA
Sbjct 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQVENPRPL AALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVENPRPLDAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV
Sbjct 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA
Sbjct 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
>gi|339632984|ref|YP_004724626.1| transposase [Mycobacterium africanum GM041182]
gi|339332340|emb|CCC28053.1| putative transposase [Mycobacterium africanum GM041182]
Length=459
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/459 (99%), Positives = 458/459 (99%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV
Sbjct 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA
Sbjct 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV
Sbjct 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKTGPRPAGGCEARKGSSPKAAEQP DGVQVA
Sbjct 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPLDGVQVA 459
>gi|339299426|gb|AEJ51536.1| transposase [Mycobacterium tuberculosis CCDC5180]
Length=459
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/459 (99%), Positives = 458/459 (99%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV
Sbjct 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
RAGKRVGFPRFKRKGRDQDRVS TTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA
Sbjct 121 RAGKRVGFPRFKRKGRDQDRVSCTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV
Sbjct 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA
Sbjct 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
>gi|289575685|ref|ZP_06455912.1| transposase [Mycobacterium tuberculosis K85]
gi|289540116|gb|EFD44694.1| transposase [Mycobacterium tuberculosis K85]
Length=459
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/459 (99%), Positives = 457/459 (99%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV
Sbjct 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSR GK
Sbjct 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRVGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA
Sbjct 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV
Sbjct 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKTGPRPAGGCEARKGSSPKAAEQP DGVQVA
Sbjct 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPLDGVQVA 459
>gi|340628796|ref|YP_004747248.1| putative transposase [Mycobacterium canettii CIPT 140010059]
gi|340006986|emb|CCC46177.1| putative transposase [Mycobacterium canettii CIPT 140010059]
Length=459
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/459 (87%), Positives = 414/459 (91%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M +FEVP+GW VQAFRFTLDPTEDQA+ALARHFGARRKAYNW VATLKADI+AW +G
Sbjct 1 MARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGIG 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
T KPSLRVLRKRWNTVKD+VCVN ETG WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 61 TVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GK +GFPRFK+KGRDQDRV+FTTGAMRVEPDRRHLTLPV+GTVRTHENTRRIERLI
Sbjct 121 REGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIAT 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAISVRRNGTRLDASVRVLVQRPQQP V PGSRVGVDVGVRRLATVA G +
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAVL 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AAL+ELR+ RARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLHVLTT
Sbjct 241 EEVPNPRPLDAALKELRYASRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHVLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLAQTHG IVVEGLDA MLRQKGLPGARARRRGLSDAALGTPRRHLSYKT WYGSALVV
Sbjct 301 RLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTGWYGSALVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCH C HVQDIGWDE WQCD CSV HQRDD AA+NLARYEE S+VGPVGA
Sbjct 361 ADRWFPSSKTCHTCGHVQDIGWDETWQCDGCSVTHQRDDNAAVNLARYEEPVSVVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKTGP PAGGCEARKG S AAEQPRDGVQVA
Sbjct 421 AVKRGADRKTGPCPAGGCEARKGGSRMAAEQPRDGVQVA 459
>gi|15609928|ref|NP_217307.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|31793967|ref|NP_856460.1| transposase [Mycobacterium bovis AF2122/97]
gi|121638671|ref|YP_978895.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
53 more sequence titles
Length=459
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/459 (87%), Positives = 418/459 (92%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M KFE+P+GW VQAFRFTLDPT +QA+ALARHFGARRKAYNWTVATLKADI AW A+G
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVK+DVCVN ETGV WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GKR+GFPRFK+KGRD DRV+FTTGAMRVEPDRRHLTLPVIGTVRTHENTRR+ERLI
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRVERLIAK 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GR+RVLAI+VRRNGTR+DASVRVLVQRPQQPKV PGSRVGVDVGVRRLATVATADG +
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVL 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AAL ELRHVCRARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
LA+THGRIVVEGLDA MLRQ+GL GARARRRGLSDAALGTPRRHLSYKT WYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGMLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCH C HVQ+IGW E WQCD CS HQRDDCAAINLARYE+TSS+VGPVGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKT P AGG EARKGSS KAAEQPRDGVQVA
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQVA 459
>gi|340625715|ref|YP_004744167.1| putative transposase [Mycobacterium canettii CIPT 140010059]
gi|340003905|emb|CCC43037.1| putative transposase [Mycobacterium canettii CIPT 140010059]
Length=459
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/459 (87%), Positives = 417/459 (91%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M KFE+P+GW VQAFRFTLDPTEDQA+ALARHFGARRKAYNWTVATLKADI AW A+G
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTEDQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVK+DVCVN ETGV WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GKR+GFPRFK+KGRD DRV+FTTGAMRVEPDRRHLTLPVIGTVRTHEN RR+ERLI
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENKRRVERLIAK 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GR+RVLAI+VRRNGTR+DASVRVLVQRPQQPKV PGSRVGVDVGVRRLATVATADG +
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVL 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AAL ELRHVCRARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
LA+THGRIVVEGLDA MLRQ+GL GARARRRGLSDAALGTPRRHLSYKT WYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGMLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCH C HVQ+IGW E WQCD CS HQRDDCAAINLARYE+TSS+VG VGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGLVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKT P AGG EARKGSS KAAEQPRDGVQVA
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQVA 459
>gi|148823979|ref|YP_001288733.1| transposase [Mycobacterium tuberculosis F11]
gi|253798125|ref|YP_003031126.1| transposase [Mycobacterium tuberculosis KZN 1435]
gi|289553422|ref|ZP_06442632.1| transposase [Mycobacterium tuberculosis KZN 605]
10 more sequence titles
Length=459
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/459 (86%), Positives = 417/459 (91%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M KFE+P+GW VQAFRFTLDPT +QA+ALARHFGARRKAYNWTVATLKADI AW A+G
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVK+DVCVN ETGV WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GKR+GFPRFK+KGRD DRV+FTTGAMRVEPDR HLTLPVIGTVRTHENTRR+ERLI
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRSHLTLPVIGTVRTHENTRRVERLIAK 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GR+RVLAI+VRRNGTR+DASVRVLVQRPQQPKV PGSRVGVDVGVRRLATVATADG +
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVL 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AAL ELRHVCRARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
LA+THGRIVVEGLDA MLRQ+GL GARARRRGLSDAALGTPRRHLSYKT WYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGMLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCH C HVQ+IGW E WQCD CS HQRDDCAAINLARYE+TSS+VGPVGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKT P AGG EARKGSS KAAEQPRDGVQVA
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQVA 459
>gi|289448449|ref|ZP_06438193.1| transposase [Mycobacterium tuberculosis CPHL_A]
gi|289421407|gb|EFD18608.1| transposase [Mycobacterium tuberculosis CPHL_A]
Length=459
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/459 (86%), Positives = 418/459 (92%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M KFE+P+GW VQAFRFTLDPT +QA+ALARHFGARRKAYNWTVATLKADI AW A+G
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVK+DVCVN ETGV WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GKR+GFPRFK+KGRD DRV+FTTGAMRVEPDRRHLTLPVIGTVRTHENTRR+ERLI
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRVERLIAK 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GR+RVLAI+VRRNGTR+DASVRVLVQRPQQPKV PGSRVGVDVGVRRLATVATADG +
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVL 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AAL ELRHVCRARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
LA+THGRIVVEGLDA +LRQ+GL GARARRRGLSDAALGTPRRHLSYKT WYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGILRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCH C HVQ+IGW E WQCD CS HQRDDCAAINLARYE+TSS+VGPVGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKT P AGG EARKGSS KAAEQPRDGVQVA
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQVA 459
>gi|15842329|ref|NP_337366.1| IS1602 transposase [Mycobacterium tuberculosis CDC1551]
gi|13882625|gb|AAK47180.1| IS1602, transposase [Mycobacterium tuberculosis CDC1551]
Length=459
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/459 (86%), Positives = 417/459 (91%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M KFE+P+GW VQAFRFTLDPT +QA+ALARHFGARRKAYNWTVATLKADI AW A+G
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVK+DVCVN ETGV WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GKR+GFPRFK+KGRD DRV+FTTGAMRVEPDRRHLTLPVIGTVRTHENTRR+ERLI
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRVERLIAK 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GR+RVLAI+VRRNGTR+DASVRVLVQRPQQPKV PGSRVGVDVGVRR ATVATADG +
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRXATVATADGAVL 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AAL ELRHVCRARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
LA+THGRIVVEGLDA MLRQ+GL GARARRRGLSDAALGTPRRHLSYKT WYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGMLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCH C HVQ+IGW E WQCD CS HQRDDCAAINLARYE+TSS+VGPVGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKT P AGG EARKGSS KAAEQPRDGVQVA
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQVA 459
>gi|289746594|ref|ZP_06505972.1| transposase [Mycobacterium tuberculosis 02_1987]
gi|289687122|gb|EFD54610.1| transposase [Mycobacterium tuberculosis 02_1987]
Length=459
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/459 (86%), Positives = 417/459 (91%), Gaps = 0/459 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M KFE+P+GW VQAFRFTLDPT +QA+ALARHFGARRKAYNWTVATLKADI AW A+G
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVK+DVCVN ETGV WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GKR+GFPRFK+KGRD DRV+FTTGAMRVEPDRRHLTLPVIGTVRTHENTRR+ERLI
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRVERLIAK 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GR+RVLAI+VRRNGTR+DASVRVLVQRPQQPKV PGSRVGVDVGVRRLATVATADG +
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVL 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AAL ELRHVCRARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
LA+THGRIVVEGLDA MLRQ+G GARARRRGLSDAALGTPRRHLSYKT WYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGMLRQQGPLGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCH C HVQ+IGW E WQCD CS HQRDDCAAINLARYE+TSS+VGPVGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
AVKRGADRKT P AGG EARKGSS KAAEQPRDGVQVA
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQVA 459
>gi|15610022|ref|NP_217401.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|15842427|ref|NP_337464.1| IS1539 transposase [Mycobacterium tuberculosis CDC1551]
gi|148662729|ref|YP_001284252.1| IS1539 transposase [Mycobacterium tuberculosis H37Ra]
33 more sequence titles
Length=460
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/458 (83%), Positives = 408/458 (90%), Gaps = 0/458 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M + +VP+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT
Sbjct 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
+AKPSLRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGK
Sbjct 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
RAGK VG PRFK+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI
Sbjct 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +
Sbjct 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQV NPRPL AALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTT
Sbjct 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLA+THGRIVVEGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVV
Sbjct 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCHACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGA
Sbjct 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQV 458
AVKRGADRKTGP PAGG EARK + A EQPRDGVQV
Sbjct 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
>gi|289553326|ref|ZP_06442536.1| transposase [Mycobacterium tuberculosis KZN 605]
gi|297635502|ref|ZP_06953282.1| transposase [Mycobacterium tuberculosis KZN 4207]
gi|297732501|ref|ZP_06961619.1| transposase [Mycobacterium tuberculosis KZN R506]
6 more sequence titles
Length=459
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/458 (83%), Positives = 408/458 (90%), Gaps = 0/458 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M + +VP+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT
Sbjct 1 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
+AKPSLRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGK
Sbjct 61 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
RAGK VG PRFK+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI
Sbjct 121 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +
Sbjct 181 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQV NPRPL AALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLA+THGRIVVEGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVV
Sbjct 301 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCHACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQV 458
AVKRGADRKTGP PAGG EARK + A EQPRDGVQV
Sbjct 421 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 458
>gi|308373566|ref|ZP_07432874.2| transposase [Mycobacterium tuberculosis SUMu005]
gi|308337164|gb|EFP26015.1| transposase [Mycobacterium tuberculosis SUMu005]
Length=454
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/453 (84%), Positives = 405/453 (90%), Gaps = 0/453 (0%)
Query 6 VPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTVTAKPS 65
+P+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT +AKPS
Sbjct 1 MPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPS 60
Query 66 LRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKRAGKR 125
LRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGKRAGK
Sbjct 61 LRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKT 120
Query 126 VGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAGRARV 185
VG PRFK+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI GRARV
Sbjct 121 VGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARV 180
Query 186 LAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAIEQVEN 245
LAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +EQV N
Sbjct 181 LAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPN 240
Query 246 PRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTTRLAQT 305
PRPL AALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTTRLA+T
Sbjct 241 PRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKT 300
Query 306 HGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVVADRWF 365
HGRIVVEGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVVADRWF
Sbjct 301 HGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWF 360
Query 366 PSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGAAVKRG 425
PSSKTCHACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGAAVKRG
Sbjct 361 PSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRG 420
Query 426 ADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQV 458
ADRKTGP PAGG EARK + A EQPRDGVQV
Sbjct 421 ADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 453
>gi|167969513|ref|ZP_02551790.1| transposase [Mycobacterium tuberculosis H37Ra]
gi|254551956|ref|ZP_05142403.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=448
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/447 (84%), Positives = 400/447 (90%), Gaps = 0/447 (0%)
Query 12 VQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTVTAKPSLRVLRK 71
+QAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT +AKPSLRVLRK
Sbjct 1 MQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK 60
Query 72 RWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKRAGKRVGFPRF 131
RWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGKRAGK VG PRF
Sbjct 61 RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF 120
Query 132 KRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAGRARVLAISVR 191
K+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI GRARVLAI+VR
Sbjct 121 KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR 180
Query 192 RNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAIEQVENPRPLGA 251
RNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +EQV NPRPL A
Sbjct 181 RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA 240
Query 252 ALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTTRLAQTHGRIVV 311
ALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTTRLA+THGRIVV
Sbjct 241 ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV 300
Query 312 EGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVVADRWFPSSKTC 371
EGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVVADRWFPSSKTC
Sbjct 301 EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC 360
Query 372 HACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGAAVKRGADRKTG 431
HACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGAAVKRGADRKTG
Sbjct 361 HACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRGADRKTG 420
Query 432 PRPAGGCEARKGSSPKAAEQPRDGVQV 458
P PAGG EARK + A EQPRDGVQV
Sbjct 421 PGPAGGREARKATGHPAGEQPRDGVQV 447
>gi|308374721|ref|ZP_07437115.2| transposase [Mycobacterium tuberculosis SUMu006]
gi|308340931|gb|EFP29782.1| transposase [Mycobacterium tuberculosis SUMu006]
Length=446
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/444 (84%), Positives = 398/444 (90%), Gaps = 0/444 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M + +VP+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT
Sbjct 1 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
+AKPSLRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGK
Sbjct 61 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
RAGK VG PRFK+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI
Sbjct 121 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +
Sbjct 181 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQV NPRPL AALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLA+THGRIVVEGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVV
Sbjct 301 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 360
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCHACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 420
Query 421 AVKRGADRKTGPRPAGGCEARKGS 444
AVKRGADRKTGP PAGG EARK +
Sbjct 421 AVKRGADRKTGPGPAGGREARKAT 444
>gi|289759006|ref|ZP_06518384.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298526354|ref|ZP_07013763.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|289714570|gb|EFD78582.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298496148|gb|EFI31442.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=439
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/436 (84%), Positives = 392/436 (90%), Gaps = 0/436 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M + +VP+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT
Sbjct 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
+AKPSLRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGK
Sbjct 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
RAGK VG PRFK+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI
Sbjct 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +
Sbjct 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQV NPRPL AALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTT
Sbjct 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLA+THGRIVVEGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVV
Sbjct 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCHACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGA
Sbjct 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
Query 421 AVKRGADRKTGPRPAG 436
AVKRGADRKTGP PAG
Sbjct 422 AVKRGADRKTGPGPAG 437
>gi|31794061|ref|NP_856554.1| putative transposase [Mycobacterium bovis AF2122/97]
gi|121638766|ref|YP_978990.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991258|ref|YP_002645947.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
10 more sequence titles
Length=439
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/436 (84%), Positives = 391/436 (90%), Gaps = 0/436 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M + +VP+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT
Sbjct 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
+AKPSLRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGK
Sbjct 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
RAGK VG PRFK+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI
Sbjct 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +
Sbjct 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQV NPRPL AALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTT
Sbjct 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLA+THGRIVVEGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVV
Sbjct 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCHACRHVQDIGWDE WQCD CS+ HQRDD AAINLARYEE S+VGPVGA
Sbjct 362 ADRWFPSSKTCHACRHVQDIGWDEIWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
Query 421 AVKRGADRKTGPRPAG 436
AVKRGADRKTGP PAG
Sbjct 422 AVKRGADRKTGPGPAG 437
>gi|289444440|ref|ZP_06434184.1| transposase [Mycobacterium tuberculosis T46]
gi|289571075|ref|ZP_06451302.1| transposase [Mycobacterium tuberculosis T17]
gi|289751550|ref|ZP_06510928.1| transposase [Mycobacterium tuberculosis T92]
gi|289417359|gb|EFD14599.1| transposase [Mycobacterium tuberculosis T46]
gi|289544829|gb|EFD48477.1| transposase [Mycobacterium tuberculosis T17]
gi|289692137|gb|EFD59566.1| transposase [Mycobacterium tuberculosis T92]
Length=439
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/436 (84%), Positives = 390/436 (90%), Gaps = 0/436 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M + +VP+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT
Sbjct 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
+AKPSLRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGK
Sbjct 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
RAGK VG PRFK+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI
Sbjct 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +
Sbjct 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQV NPRPL AALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTT
Sbjct 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLA+THGRIVVEGLDA MLRQKGL GARARRR LSDAAL TPRRHLSYKT WYGS+LVV
Sbjct 302 RLAKTHGRIVVEGLDAAGMLRQKGLLGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
Query 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
ADRWFPSSKTCHACRHVQDIGWDE WQCD CS+ HQRDD AAINLARYEE S+VGPVGA
Sbjct 362 ADRWFPSSKTCHACRHVQDIGWDEIWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
Query 421 AVKRGADRKTGPRPAG 436
AVKRGADRKTGP PAG
Sbjct 422 AVKRGADRKTGPGPAG 437
>gi|339295723|gb|AEJ47834.1| hypothetical protein CCDC5079_2644 [Mycobacterium tuberculosis
CCDC5079]
gi|339299339|gb|AEJ51449.1| hypothetical protein CCDC5180_2612 [Mycobacterium tuberculosis
CCDC5180]
Length=427
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/425 (85%), Positives = 384/425 (91%), Gaps = 0/425 (0%)
Query 12 VQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTVTAKPSLRVLRK 71
+QAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT +AKPSLRVLRK
Sbjct 1 MQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK 60
Query 72 RWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKRAGKRVGFPRF 131
RWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGKRAGK VG PRF
Sbjct 61 RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF 120
Query 132 KRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAGRARVLAISVR 191
K+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI GRARVLAI+VR
Sbjct 121 KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR 180
Query 192 RNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAIEQVENPRPLGA 251
RNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +EQV NPRPL A
Sbjct 181 RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA 240
Query 252 ALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTTRLAQTHGRIVV 311
ALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTTRLA+THGRIVV
Sbjct 241 ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV 300
Query 312 EGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVVADRWFPSSKTC 371
EGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVVADRWFPSSKTC
Sbjct 301 EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC 360
Query 372 HACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGAAVKRGADRKTG 431
HACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGAAVKRGADRKTG
Sbjct 361 HACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRGADRKTG 420
Query 432 PRPAG 436
P PAG
Sbjct 421 PGPAG 425
>gi|294994021|ref|ZP_06799712.1| transposase [Mycobacterium tuberculosis 210]
Length=386
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/378 (85%), Positives = 343/378 (91%), Gaps = 0/378 (0%)
Query 12 VQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTVTAKPSLRVLRK 71
+QAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT +AKPSLRVLRK
Sbjct 1 MQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK 60
Query 72 RWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKRAGKRVGFPRF 131
RWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGKRAGK VG PRF
Sbjct 61 RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF 120
Query 132 KRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAGRARVLAISVR 191
K+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI GRARVLAI+VR
Sbjct 121 KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR 180
Query 192 RNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAIEQVENPRPLGA 251
RNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +EQV NPRPL A
Sbjct 181 RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA 240
Query 252 ALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTTRLAQTHGRIVV 311
ALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTTRLA+THGRIVV
Sbjct 241 ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV 300
Query 312 EGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVVADRWFPSSKTC 371
EGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVVADRWFPSSKTC
Sbjct 301 EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC 360
Query 372 HACRHVQDIGWDEQWQCD 389
HACRHVQDIGWDE+WQCD
Sbjct 361 HACRHVQDIGWDEKWQCD 378
>gi|15843451|ref|NP_338488.1| IS1537 transposase [Mycobacterium tuberculosis CDC1551]
gi|31795001|ref|NP_857494.1| putative transposase [Mycobacterium bovis AF2122/97]
gi|121639745|ref|YP_979969.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
30 more sequence titles
Length=408
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/367 (87%), Positives = 334/367 (92%), Gaps = 0/367 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M +FEVP+GW VQAFRFTLDPTEDQA+ALARHFGARRKAYNW VATLKADI+AW +G
Sbjct 2 MARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGIG 61
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
T KPSLRVLRKRWNTVKD+VCVN ETG WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 62 TVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSGK 121
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GK +GFPRFK+KGRDQDRV+FTTGAMRVEPDRRHLTLPV+GTVRTHENTRRIERLI
Sbjct 122 REGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIAT 181
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAISVRRNGTRLDASVRVLVQRPQQP V PGSRVGVDVGVRRLATVA G +
Sbjct 182 GRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAVL 241
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AAL+ELR+ RARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLHVLTT
Sbjct 242 EEVPNPRPLDAALKELRYASRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHVLTT 301
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLAQTHG IVVEGLDA MLRQKGLPGARARRRGLSD+ALGTPRRHLSYKT WYGSALVV
Sbjct 302 RLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDSALGTPRRHLSYKTGWYGSALVV 361
Query 361 ADRWFPS 367
ADRWFPS
Sbjct 362 ADRWFPS 368
>gi|148825034|ref|YP_001289788.1| transposase [Mycobacterium tuberculosis F11]
gi|254233316|ref|ZP_04926642.1| hypothetical protein TBCG_03753 [Mycobacterium tuberculosis C]
gi|254366371|ref|ZP_04982415.1| transposase [Mycobacterium tuberculosis str. Haarlem]
26 more sequence titles
Length=407
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/367 (87%), Positives = 334/367 (92%), Gaps = 0/367 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M +FEVP+GW VQAFRFTLDPTEDQA+ALARHFGARRKAYNW VATLKADI+AW +G
Sbjct 1 MARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGIG 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
T KPSLRVLRKRWNTVKD+VCVN ETG WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 61 TVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GK +GFPRFK+KGRDQDRV+FTTGAMRVEPDRRHLTLPV+GTVRTHENTRRIERLI
Sbjct 121 REGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIAT 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAISVRRNGTRLDASVRVLVQRPQQP V PGSRVGVDVGVRRLATVA G +
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAVL 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AAL+ELR+ RARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLHVLTT
Sbjct 241 EEVPNPRPLDAALKELRYASRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHVLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLAQTHG IVVEGLDA MLRQKGLPGARARRRGLSD+ALGTPRRHLSYKT WYGSALVV
Sbjct 301 RLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDSALGTPRRHLSYKTGWYGSALVV 360
Query 361 ADRWFPS 367
ADRWFPS
Sbjct 361 ADRWFPS 367
>gi|15610963|ref|NP_218344.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|148663695|ref|YP_001285218.1| IS1537 transposase [Mycobacterium tuberculosis H37Ra]
gi|2224818|emb|CAB10011.1| POSSIBLE TRANSPOSASE [Mycobacterium tuberculosis H37Rv]
gi|148507847|gb|ABQ75656.1| IS1537 transposase [Mycobacterium tuberculosis H37Ra]
Length=408
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/367 (86%), Positives = 333/367 (91%), Gaps = 0/367 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M +FEVP+GW VQAFRFTLDPTEDQA+ALARHFGARRKAYNW VATLKADI+AW +G
Sbjct 2 MARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGIG 61
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
T KPSLRVLRKRWNTVKD+VCVN ETG WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 62 TVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSGK 121
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GK +GFPRFK+KGRDQDRV+FTTGAMRVEPDRRHLTLPV+GTVRTHENTRRIERLI
Sbjct 122 REGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIAT 181
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAISVRRNGTRLDASVRVLVQRPQQP V PGSRVGVDVGVRRLATVA G +
Sbjct 182 GRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAVL 241
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AL+ELR+ RARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLHVLTT
Sbjct 242 EEVPNPRPLDTALKELRYASRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHVLTT 301
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLAQTHG IVVEGLDA MLRQKGLPGARARRRGLSD+ALGTPRRHLSYKT WYGSALVV
Sbjct 302 RLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDSALGTPRRHLSYKTGWYGSALVV 361
Query 361 ADRWFPS 367
ADRWFPS
Sbjct 362 ADRWFPS 368
>gi|167969942|ref|ZP_02552219.1| IS1537 transposase [Mycobacterium tuberculosis H37Ra]
gi|308232584|ref|ZP_07416527.2| transposase [Mycobacterium tuberculosis SUMu001]
gi|308379635|ref|ZP_07486968.2| transposase [Mycobacterium tuberculosis SUMu010]
6 more sequence titles
Length=407
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/367 (86%), Positives = 333/367 (91%), Gaps = 0/367 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M +FEVP+GW VQAFRFTLDPTEDQA+ALARHFGARRKAYNW VATLKADI+AW +G
Sbjct 1 MARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGIG 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
T KPSLRVLRKRWNTVKD+VCVN ETG WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 61 TVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GK +GFPRFK+KGRDQDRV+FTTGAMRVEPDRRHLTLPV+GTVRTHENTRRIERLI
Sbjct 121 REGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIAT 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAISVRRNGTRLDASVRVLVQRPQQP V PGSRVGVDVGVRRLATVA G +
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAVL 240
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AL+ELR+ RARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLHVLTT
Sbjct 241 EEVPNPRPLDTALKELRYASRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHVLTT 300
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLAQTHG IVVEGLDA MLRQKGLPGARARRRGLSD+ALGTPRRHLSYKT WYGSALVV
Sbjct 301 RLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDSALGTPRRHLSYKTGWYGSALVV 360
Query 361 ADRWFPS 367
ADRWFPS
Sbjct 361 ADRWFPS 367
>gi|289441265|ref|ZP_06431009.1| transposase [Mycobacterium tuberculosis T46]
gi|289572081|ref|ZP_06452308.1| transposase [Mycobacterium tuberculosis T17]
gi|289748358|ref|ZP_06507736.1| transposase [Mycobacterium tuberculosis T92]
gi|289414184|gb|EFD11424.1| transposase [Mycobacterium tuberculosis T46]
gi|289545835|gb|EFD49483.1| transposase [Mycobacterium tuberculosis T17]
gi|289688945|gb|EFD56374.1| transposase [Mycobacterium tuberculosis T92]
Length=408
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/367 (86%), Positives = 333/367 (91%), Gaps = 0/367 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M +FEVP+GW VQAFRFTLDPTEDQA+ALARHFGARRKAYNW VATLKADI+AW +G
Sbjct 2 MARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGIG 61
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
T KPSLRVLRKRWNTVKD+VCVN ETG WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 62 TVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSGK 121
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GK +GFPRFK+KGRDQDRV+FTTGAMRVEPDRRHLTLPV+GTVRTHENTRRIERLI
Sbjct 122 REGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIAT 181
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GRARVLAISVRRNGTRLDASVRVLVQRPQQP V PGSRVGVDVGVRRLATVA G +
Sbjct 182 GRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAVL 241
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
E+V NPRPL AAL+ELR+ RARSRCTKGSR YRERTT+ISRLHRRVNDVRTHHLHVLTT
Sbjct 242 EEVPNPRPLDAALKELRYASRARSRCTKGSRHYRERTTEISRLHRRVNDVRTHHLHVLTT 301
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RLAQTHG IVVEGLDA MLRQKGLPGARARRRGLSD+ALGTPRRHLSYKT WYGSALVV
Sbjct 302 RLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDSALGTPRRHLSYKTGWYGSALVV 361
Query 361 ADRWFPS 367
ADRWFPS
Sbjct 362 ADRWFPS 368
>gi|289751448|ref|ZP_06510826.1| transposase [Mycobacterium tuberculosis T92]
gi|289692035|gb|EFD59464.1| transposase [Mycobacterium tuberculosis T92]
Length=324
Score = 540 bits (1390), Expect = 3e-151, Method: Compositional matrix adjust.
Identities = 273/321 (86%), Positives = 288/321 (90%), Gaps = 0/321 (0%)
Query 139 DRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAGRARVLAISVRRNGTRLD 198
DR +F TGAMRV P R +LTLP+IGTVRTHENTRR+ERLI GR+RVLAI+VRRNGTR+D
Sbjct 4 DRENFPTGAMRVRPARPNLTLPIIGTVRTHENTRRVERLIAKGRSRVLAITVRRNGTRID 63
Query 199 ASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAIEQVENPRPLGAALRELRH 258
ASVRVLVQRPQQPKV PGSRVGVDVGVRRLATVATADG +E+V NPRPL AAL ELRH
Sbjct 64 ASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVLERVPNPRPLDAALNELRH 123
Query 259 VCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTTRLAQTHGRIVVEGLDATE 318
VCRARSRCTKGSRRYRERTT+ISRLHRRVNDVRTHHLH LTT LA+THGRIVVEGLDA
Sbjct 124 VCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTTHLAKTHGRIVVEGLDAAG 183
Query 319 MLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVVADRWFPSSKTCHACRHVQ 378
MLRQ+GL GARARRRGLSDAALGTPRRHLSYKT WYGS LVVADRWFPSSKTCH C HVQ
Sbjct 184 MLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVVADRWFPSSKTCHVCGHVQ 243
Query 379 DIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGAAVKRGADRKTGPRPAGGC 438
+IGW E WQCD CS HQRDDCAAINLARYE+TSS+VGPVGAAVKRGADRKT P AGG
Sbjct 244 EIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGAAVKRGADRKTRPGRAGGR 303
Query 439 EARKGSSPKAAEQPRDGVQVA 459
EARKGSS KAAEQPRDGVQVA
Sbjct 304 EARKGSSRKAAEQPRDGVQVA 324
>gi|289758918|ref|ZP_06518296.1| predicted protein [Mycobacterium tuberculosis T85]
gi|289714482|gb|EFD78494.1| predicted protein [Mycobacterium tuberculosis T85]
Length=303
Score = 434 bits (1117), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 212/260 (82%), Positives = 229/260 (89%), Gaps = 0/260 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M KFE+P+GW VQAFRFTLDPT +QA+ALARHFGARRKAYNWTVATLKADI AW A+G
Sbjct 30 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 89
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVK+DVCVN ETGV WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 90 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 149
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GKR+GFPRFK+KGRD DRV+FTTGAM VEPDR GTVRTHENTRR+ERLI
Sbjct 150 RDGKRMGFPRFKKKGRDPDRVTFTTGAMGVEPDRATSRCRSFGTVRTHENTRRVERLIAK 209
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
GR+RVLAI+VRRNGTR+DASVRVLVQRPQQPKV PGSRVGVDVGVRRLATVATADG +
Sbjct 210 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVL 269
Query 241 EQVENPRPLGAALRELRHVC 260
E+V NPRPL AAL ELRHVC
Sbjct 270 ERVPNPRPLDAALNELRHVC 289
>gi|50953767|ref|YP_061206.1| truncated IS1536 transposase [Mycobacterium tuberculosis CDC1551]
gi|308231598|ref|ZP_07663888.1| transposase [Mycobacterium tuberculosis SUMu001]
gi|308369994|ref|ZP_07666839.1| transposase [Mycobacterium tuberculosis SUMu002]
22 more sequence titles
Length=273
Score = 415 bits (1066), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 203/237 (86%), Positives = 214/237 (91%), Gaps = 0/237 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
MP+ E+P+GW VQAFRFTLDPT +QA ALARHFGARRKAYNWTVA LKADIQAW A+G
Sbjct 27 MPRLEIPNGWCVQAFRFTLDPTAEQAHALARHFGARRKAYNWTVAQLKADIQAWRATGAQ 86
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVKD+VCVN ETG WWPECSKEAYADGIAGAV+AYWNWQ RAGK
Sbjct 87 TAKPSLRVLRKRWNTVKDEVCVNAETGTVWWPECSKEAYADGIAGAVDAYWNWQQRRAGK 146
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GKR+GFPRFK+KGRD DRVSFTTGAMRVEPDRRHLTLPVIG VRTHENTRRIERLI
Sbjct 147 RDGKRMGFPRFKKKGRDADRVSFTTGAMRVEPDRRHLTLPVIGCVRTHENTRRIERLIAK 206
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADG 237
RARVLAI+VRRNGTRLDASVRVLVQRPQQP V P SR+GVDVGVRRLATVATADG
Sbjct 207 DRARVLAITVRRNGTRLDASVRVLVQRPQQPNVELPESRIGVDVGVRRLATVATADG 263
>gi|15607746|ref|NP_215120.1| hypothetical protein Rv0606 [Mycobacterium tuberculosis H37Rv]
gi|31791788|ref|NP_854281.1| transposase [Mycobacterium bovis AF2122/97]
gi|121636524|ref|YP_976747.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
49 more sequence titles
Length=247
Score = 414 bits (1064), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 203/237 (86%), Positives = 214/237 (91%), Gaps = 0/237 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
MP+ E+P+GW VQAFRFTLDPT +QA ALARHFGARRKAYNWTVA LKADIQAW A+G
Sbjct 1 MPRLEIPNGWCVQAFRFTLDPTAEQAHALARHFGARRKAYNWTVAQLKADIQAWRATGAQ 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVKD+VCVN ETG WWPECSKEAYADGIAGAV+AYWNWQ RAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDEVCVNAETGTVWWPECSKEAYADGIAGAVDAYWNWQQRRAGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GKR+GFPRFK+KGRD DRVSFTTGAMRVEPDRRHLTLPVIG VRTHENTRRIERLI
Sbjct 121 RDGKRMGFPRFKKKGRDADRVSFTTGAMRVEPDRRHLTLPVIGCVRTHENTRRIERLIAK 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADG 237
RARVLAI+VRRNGTRLDASVRVLVQRPQQP V P SR+GVDVGVRRLATVATADG
Sbjct 181 DRARVLAITVRRNGTRLDASVRVLVQRPQQPNVELPESRIGVDVGVRRLATVATADG 237
>gi|339295640|gb|AEJ47751.1| putative transposase [Mycobacterium tuberculosis CCDC5079]
Length=274
Score = 406 bits (1043), Expect = 4e-111, Method: Compositional matrix adjust.
Identities = 193/225 (86%), Positives = 208/225 (93%), Gaps = 0/225 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
M KFE+P+GW VQAFRFTLDPT +QA+ALARHFGARRKAYNWTVATLKADI AW A+G
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVK+DVCVN ETGV WWPECSKEAYADGI GAV+AYWNWQ SR+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GKR+GFPRFK+KGRD DRV+FTTGAMRVEPDRRHLTLPVIGTVRTHENTRR+ERLI
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRVERLIAK 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVG 225
GR+RVLAI+VRRNGTR+DASVRVLVQRPQQPKV PGSRVGVDVG
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVG 225
>gi|289446159|ref|ZP_06435903.1| transposase [Mycobacterium tuberculosis CPHL_A]
gi|289419117|gb|EFD16318.1| transposase [Mycobacterium tuberculosis CPHL_A]
Length=216
Score = 370 bits (951), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 179/208 (87%), Positives = 189/208 (91%), Gaps = 0/208 (0%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
MP+ E+P+GW VQAFRFTLDPT +QA ALARHFGARRKAYNWTVA LKADIQAW A+G
Sbjct 1 MPRLEIPNGWCVQAFRFTLDPTAEQAHALARHFGARRKAYNWTVAQLKADIQAWRATGAQ 60
Query 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
TAKPSLRVLRKRWNTVKD+VCVN ETG WWPECSKEAYADGIAGAV+AYWNWQ RAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDEVCVNAETGTVWWPECSKEAYADGIAGAVDAYWNWQQRRAGK 120
Query 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
R GKR+GFPRFK+KGRD DRVSFTTGAMRVEPDRRHLTLPVIG VRTHENTRRIERLI
Sbjct 121 RDGKRMGFPRFKKKGRDADRVSFTTGAMRVEPDRRHLTLPVIGCVRTHENTRRIERLIAK 180
Query 181 GRARVLAISVRRNGTRLDASVRVLVQRP 208
RARVLAI+VRRNGTRLDASVRVLVQRP
Sbjct 181 DRARVLAITVRRNGTRLDASVRVLVQRP 208
>gi|289441995|ref|ZP_06431739.1| transposase [Mycobacterium tuberculosis T46]
gi|289414914|gb|EFD12154.1| transposase [Mycobacterium tuberculosis T46]
Length=238
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 184/226 (82%), Positives = 196/226 (87%), Gaps = 1/226 (0%)
Query 13 QAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADI-QAWHASGTVTAKPSLRVLRK 71
+AFRFTLDPT +QA ALARHFGARRKAYN ++ + W A+G TAKPSLRVLRK
Sbjct 3 KAFRFTLDPTAEQAHALARHFGARRKAYNLDRRAAESRYSKRWRATGAQTAKPSLRVLRK 62
Query 72 RWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKRAGKRVGFPRF 131
RWNTVKD+VCVN ETG WWPECSKEAYADGIAGAV+AYWNWQ RAGKR GKR+GFPRF
Sbjct 63 RWNTVKDEVCVNAETGTVWWPECSKEAYADGIAGAVDAYWNWQQRRAGKRDGKRMGFPRF 122
Query 132 KRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAGRARVLAISVR 191
K+KGRD DRVSFTTGAMRVEPDRRHLTLPVIG VRTHENTRRIERLI RARVLAI+VR
Sbjct 123 KKKGRDADRVSFTTGAMRVEPDRRHLTLPVIGCVRTHENTRRIERLIAKDRARVLAITVR 182
Query 192 RNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADG 237
RNGTRLDASVRVLVQRPQQP V P SR+GVDVGVRRLATVATADG
Sbjct 183 RNGTRLDASVRVLVQRPQQPNVELPESRIGVDVGVRRLATVATADG 228
>gi|340628251|ref|YP_004746703.1| IS1539 transposase [Mycobacterium canettii CIPT 140010059]
gi|340006441|emb|CCC45623.1| IS1539 transposase [Mycobacterium canettii CIPT 140010059]
Length=184
Score = 296 bits (757), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 150/184 (82%), Positives = 156/184 (85%), Gaps = 4/184 (2%)
Query 280 ISRLHRRVNDVRTHHLHVLTTRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAA 339
+SRLHRRVNDVRTHHLHVLTTRLAQTHGRIVVEGLDA MLRQKGLPGARARRRGLSD+A
Sbjct 1 MSRLHRRVNDVRTHHLHVLTTRLAQTHGRIVVEGLDAAGMLRQKGLPGARARRRGLSDSA 60
Query 340 LGTPRRHLSYKTVWYGSALVVADRWFPSSKTCHACRHVQDIGWDEQWQCD----RCSVVH 395
LGTPRRHLSYKT WYGS LVVADRWFPSSKTCH C HVQDIGWDE+W CD C V H
Sbjct 61 LGTPRRHLSYKTGWYGSELVVADRWFPSSKTCHGCGHVQDIGWDEKWICDPTDGGCGVTH 120
Query 396 QRDDCAAINLARYEETSSIVGPVGAAVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDG 455
QRDDCAAINLARYEE S+VGPVGAAVKR AD KT P GG EARK + A EQPRDG
Sbjct 121 QRDDCAAINLARYEEPVSVVGPVGAAVKRAADPKTRPGRTGGDEARKATGHPAGEQPRDG 180
Query 456 VQVA 459
V+VA
Sbjct 181 VRVA 184
>gi|240171119|ref|ZP_04749778.1| putative transposase [Mycobacterium kansasii ATCC 12478]
Length=550
Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 193/463 (42%), Positives = 253/463 (55%), Gaps = 37/463 (7%)
Query 5 EVPDGWTVQAFRFTLD-PTEDQAKALAR-HFGARRKAYNWTVATLKADIQAWHASGTVTA 62
EV GW V A +F ++ P E + AL R HFGARRKA+NW + +KAD+ A A +
Sbjct 78 EVASGWLVTAAKFEVEWPAEPERAALVRSHFGARRKAFNWGLGRVKADLDAKSADPEHES 137
Query 63 KP-SLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKR 121
L LRK WN K +V WW SKE Y+ G+A +A NW S+ G+R
Sbjct 138 LGWDLGALRKAWNLAKHEVA-------PWWATNSKECYSAGLADLAQALSNWSASKNGRR 190
Query 122 AGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAG 181
G+RVGFPRF RD RV FTTG MRVE DR +T+PVI +R+ ENTRR++R + +G
Sbjct 191 QGRRVGFPRFATARRDPGRVRFTTGTMRVEDDRHSITVPVISALRSKENTRRVQRHLASG 250
Query 182 RARVLAISVRRNGTRLDASVRVLVQRPQQPKV-VHPGSRVGVDVGVRRLATVATAD-GTA 239
RAR+L +++ + RL SV ++ P + P R GVD+GVR LATVAT D T
Sbjct 251 RARILNMTLSQRWGRLFVSVGYALRTPSAGRTPTQPTVRAGVDLGVRTLATVATIDPATG 310
Query 240 IEQV---ENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLH 296
+E V +NP PL A L R R SR GS +R +++RL RR +R H
Sbjct 311 VETVVEYKNPAPLKATLAARRRAGRELSRRIPGSHGHRAAKAKLTRLDRRCVHLRREAAH 370
Query 297 VLTTRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGS 356
LTT+LA T+G++V+E LD M R G RA RR +SDAA+G L+YKT +GS
Sbjct 371 QLTTQLAGTYGQVVIEDLDVAAMKRSMGR---RAFRRSVSDAAMGLVAPMLAYKTTRHGS 427
Query 357 ALVVADRWFPSSKTCHACRHVQD-----IG---WDEQWQCDRCSVVHQRDDCAAINLARY 408
L+VADRWFPSS+ H C H +G D+ C + + RD AA+NL +
Sbjct 428 TLIVADRWFPSSQLHHRCTHPNGTPCRLVGKGRIDKHLICPQTGEMVDRDRNAALNLRDW 487
Query 409 EETSSIVGPVGA----------AVKRGADRKTGPRPAGGCEAR 441
+ +S GPVG +V G TG AGG R
Sbjct 488 PDYAS-CGPVGTTAPSVPGPTESVGTGHGADTGSTGAGGASVR 529
>gi|296165345|ref|ZP_06847886.1| transposase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899236|gb|EFG78701.1| transposase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=551
Score = 285 bits (730), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 193/463 (42%), Positives = 253/463 (55%), Gaps = 37/463 (7%)
Query 5 EVPDGWTVQAFRFTLD-PTEDQAKALAR-HFGARRKAYNWTVATLKADIQAWHASGTVTA 62
EV GW V A +F ++ P E + AL R HFGARRKA+NW + +KAD+ A A +
Sbjct 79 EVASGWLVTAAKFEVEWPAEPERAALVRSHFGARRKAFNWGLGRVKADLDAKSADPEHES 138
Query 63 KP-SLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKR 121
L LRK WN K +V WW SKE Y+ G+A +A NW S+ G+R
Sbjct 139 LGWDLGALRKAWNLAKHEVA-------PWWATNSKECYSAGLADLAQALSNWSASKNGRR 191
Query 122 AGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAG 181
G+RVGFPRF RD RV FTTG MRVE DR +T+PVI +R+ ENTRR++R + +G
Sbjct 192 QGRRVGFPRFATARRDPGRVRFTTGTMRVEDDRHSITVPVISALRSKENTRRVQRHLASG 251
Query 182 RARVLAISVRRNGTRLDASVRVLVQRPQQPKV-VHPGSRVGVDVGVRRLATVATAD-GTA 239
RAR+L +++ + RL SV ++ P + P R GVD+GVR LATVAT D T
Sbjct 252 RARILNMTLSQRWGRLFVSVGYALRTPSAGRTPTQPTVRAGVDLGVRTLATVATIDPATG 311
Query 240 IEQV---ENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLH 296
+E V +NP PL A L R R SR GS +R +++RL RR +R H
Sbjct 312 VETVVEYKNPAPLKATLAARRRAGRELSRRIPGSHGHRAAKAKLTRLDRRCVHLRREAAH 371
Query 297 VLTTRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGS 356
LTT+LA T+G++V+E LD M R G RA RR +SDAA+G L+YKT +GS
Sbjct 372 QLTTQLAGTYGQVVIEDLDVAAMKRSM---GRRAFRRSVSDAAMGLVAPMLAYKTTRHGS 428
Query 357 ALVVADRWFPSSKTCHACRHVQD-----IG---WDEQWQCDRCSVVHQRDDCAAINLARY 408
L+VADRWFPSS+ H C H +G D+ C + + RD AA+NL +
Sbjct 429 TLIVADRWFPSSQLHHRCTHPNGTPCRLVGKGRIDKHLICPQTGEMVDRDRNAALNLRDW 488
Query 409 EETSSIVGPVGA----------AVKRGADRKTGPRPAGGCEAR 441
+ +S GPVG +V G TG AGG R
Sbjct 489 PDYAS-CGPVGTTAPSVPGPTESVGTGHGADTGSTGAGGASVR 530
>gi|32455749|ref|NP_862583.1| hypothetical protein pCLPp16 [Mycobacterium celatum]
gi|13810890|gb|AAK40078.1| Rv0922-like protein [Mycobacterium celatum]
Length=485
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 200/479 (42%), Positives = 256/479 (54%), Gaps = 45/479 (9%)
Query 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKA--DIQAWHASG 58
M +FEVP+GWT QA+RF LDPT Q + LA H GA R A+N +A +KA D +A S
Sbjct 1 MARFEVPEGWTAQAYRFALDPTPTQLRGLASHAGAARFAHNHMLALVKATMDQRADERSY 60
Query 59 TVTAKP-------SLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYW 111
V SL LR+ WN K C WW E SKEAY G+
Sbjct 61 GVPESELTPVLGWSLPALRRVWNQRKA-WCA------PWWGENSKEAYNTGLDALARGLE 113
Query 112 NWQTSRAGKRAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENT 171
W SR G+R G+ VGFPRFK R V FTTG +R+E DRRH+TLP +G +RTHE+T
Sbjct 114 AWSKSRRGQRKGRAVGFPRFK-TARAGKSVRFTTGTIRIEADRRHVTLPRLGAIRTHEST 172
Query 172 RRIERLIKAGRARVLAISVRRNGT-RLDASVRVLVQRPQQPKVV--HPGSRVGVDVGVR- 227
R++ R I+AG AR+L+ +VR++ R +++V+V+ +P P + VGVDVGV+
Sbjct 173 RKLARRIEAGTARILSATVRQDSAGRWHCALQVIVEAKTRPAHARRSPHAGVGVDVGVKA 232
Query 228 -RLATVATADGTAIEQVENPRPLGAALRELRHVCRARSRCT-----------KGSRRYRE 275
L VA+ DG ++++ P+ L AA LR + R +R + SRR+R
Sbjct 233 DALLVVASPDGVEVDRIPAPKSLTAAQSRLRALQRRAARQHGPYDFQTGTRRQPSRRWRT 292
Query 276 RTTQISRLHRRVNDVRTHHLHVLTTRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGL 335
+I R H VR LH TT LAQ H IVVE L+A M R G R R L
Sbjct 293 TQARIGRTHAHAAAVRRDVLHKATTALAQQHQVIVVETLNAAGM-RSAGGARKRGLNRAL 351
Query 336 SDAALGTPRRHLSYKTVWYGSALVVADRWFPSSKTCHAC--RHVQDIGWDEQWQCDRCSV 393
+DAAL RR L YKT WYGS L ADR+FPSSKTC C R D + C+ C
Sbjct 352 ADAALAEVRRMLGYKTRWYGSRLEEADRYFPSSKTCTGCGRRKPNLTLADRVFDCEHCGT 411
Query 394 VHQRDDCAAINLARY------EETSSIVGPVGAAVKRGADRKTGPRPAGGCEARKGSSP 446
RD AAINLAR E++ + GPV RGA +T P PAG + S+P
Sbjct 412 RIDRDLGAAINLARLGEPNWGEQSPAGSGPVAG---RGATHETEPAPAGDAAGNEASTP 467
>gi|339295639|gb|AEJ47750.1| transposase [Mycobacterium tuberculosis CCDC5079]
Length=158
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/158 (86%), Positives = 141/158 (90%), Gaps = 0/158 (0%)
Query 302 LAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVVA 361
+A+THGRIVVEGLDA MLRQ+GL GARARRRGLSDAALGTPRRHLSYKT WYGS LVVA
Sbjct 1 MAKTHGRIVVEGLDAAGMLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVVA 60
Query 362 DRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGAA 421
DRWFPSSKTCH C HVQ+IGW E WQCD CS HQRDDCAAINLARYE+TSS+VGPVGAA
Sbjct 61 DRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGAA 120
Query 422 VKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA 459
VKRGADRKT P AGG EARKGSS KAAEQPRDGVQVA
Sbjct 121 VKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQVA 158
>gi|289573552|ref|ZP_06453779.1| transposase [Mycobacterium tuberculosis K85]
gi|289537983|gb|EFD42561.1| transposase [Mycobacterium tuberculosis K85]
Length=550
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 180/434 (42%), Positives = 238/434 (55%), Gaps = 27/434 (6%)
Query 2 PKFEVPDGWTVQAFRFTLD-PTEDQAKALAR-HFGARRKAYNWTVATLKADIQAWHAS-G 58
P ++P GW V A +F ++ P + Q L R HFGARRKA+NW +A +KAD+ A A
Sbjct 75 PGAQLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPA 134
Query 59 TVTAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRA 118
+ L+ LR WN KDDV WW E SKE Y+ G+A + NW+ +
Sbjct 135 HESVDWDLKSLRWAWNRAKDDVA-------PWWAENSKECYSSGLADLAQGLANWKAGKN 187
Query 119 GKRAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLI 178
G R G+RVGFPRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRR++R +
Sbjct 188 GTRKGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHL 247
Query 179 KAGRARVLAISVRRNGTRLDASVRVLVQRP-QQPKVVHPGSRVGVDVGVRRLATVATADG 237
+GRA++L +++ + RL +V ++ P + + P R G+D+GVR LATVAT D
Sbjct 248 VSGRAQILNMTLSQQWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDT 307
Query 238 TAIEQV----ENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTH 293
EQ NP PL A L R R SR GS +R +++RL RR +R
Sbjct 308 ATGEQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRRE 367
Query 294 HLHVLTTRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVW 353
H LTT LA T+G++V+E LD M K RA RR +SDAA+G L+YKT
Sbjct 368 AAHQLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAK 424
Query 354 YGSALVVADRWFPSSKTCHACRH-------VQDIG-WDEQWQCDRCSVVHQRDDCAAINL 405
L VADRWF SS+ H C +Q G D+ C V RD AA+NL
Sbjct 425 CSGVLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNL 484
Query 406 ARYEETSSIVGPVG 419
+ + +S GPVG
Sbjct 485 RDWPDNAS-RGPVG 497
>gi|167967048|ref|ZP_02549325.1| transposase [Mycobacterium tuberculosis H37Ra]
gi|254549903|ref|ZP_05140350.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|308377549|ref|ZP_07479626.2| transposase [Mycobacterium tuberculosis SUMu009]
gi|308397507|ref|ZP_07492558.2| transposase [Mycobacterium tuberculosis SUMu012]
gi|308355357|gb|EFP44208.1| transposase [Mycobacterium tuberculosis SUMu009]
gi|308366861|gb|EFP55712.1| transposase [Mycobacterium tuberculosis SUMu012]
gi|323720633|gb|EGB29711.1| transposase [Mycobacterium tuberculosis CDC1551A]
Length=546
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 180/434 (42%), Positives = 238/434 (55%), Gaps = 27/434 (6%)
Query 2 PKFEVPDGWTVQAFRFTLD-PTEDQAKALAR-HFGARRKAYNWTVATLKADIQAWHAS-G 58
P ++P GW V A +F ++ P + Q L R HFGARRKA+NW +A +KAD+ A A
Sbjct 71 PGAQLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPA 130
Query 59 TVTAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRA 118
+ L+ LR WN KDDV WW E SKE Y+ G+A + NW+ +
Sbjct 131 HESVDWDLKSLRWAWNRAKDDVA-------PWWAENSKECYSSGLADLAQGLANWKAGKN 183
Query 119 GKRAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLI 178
G R G+RVGFPRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRR++R +
Sbjct 184 GTRKGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHL 243
Query 179 KAGRARVLAISVRRNGTRLDASVRVLVQRP-QQPKVVHPGSRVGVDVGVRRLATVATADG 237
+GRA++L +++ + RL +V ++ P + + P R G+D+GVR LATVAT D
Sbjct 244 VSGRAQILNMTLSQRWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDT 303
Query 238 TAIEQV----ENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTH 293
EQ NP PL A L R R SR GS +R +++RL RR +R
Sbjct 304 ATGEQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRRE 363
Query 294 HLHVLTTRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVW 353
H LTT LA T+G++V+E LD M K RA RR +SDAA+G L+YKT
Sbjct 364 AAHQLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAK 420
Query 354 YGSALVVADRWFPSSKTCHACRH-------VQDIG-WDEQWQCDRCSVVHQRDDCAAINL 405
L VADRWF SS+ H C +Q G D+ C V RD AA+NL
Sbjct 421 CSGVLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNL 480
Query 406 ARYEETSSIVGPVG 419
+ + +S GPVG
Sbjct 481 RDWPDNAS-RGPVG 493
>gi|15608062|ref|NP_215437.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|15840345|ref|NP_335382.1| IS1535 transposase [Mycobacterium tuberculosis CDC1551]
gi|31792110|ref|NP_854603.1| putative transposase [Mycobacterium bovis AF2122/97]
53 more sequence titles
Length=550
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 180/434 (42%), Positives = 238/434 (55%), Gaps = 27/434 (6%)
Query 2 PKFEVPDGWTVQAFRFTLD-PTEDQAKALAR-HFGARRKAYNWTVATLKADIQAWHAS-G 58
P ++P GW V A +F ++ P + Q L R HFGARRKA+NW +A +KAD+ A A
Sbjct 75 PGAQLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPA 134
Query 59 TVTAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRA 118
+ L+ LR WN KDDV WW E SKE Y+ G+A + NW+ +
Sbjct 135 HESVDWDLKSLRWAWNRAKDDVA-------PWWAENSKECYSSGLADLAQGLANWKAGKN 187
Query 119 GKRAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLI 178
G R G+RVGFPRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRR++R +
Sbjct 188 GTRKGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHL 247
Query 179 KAGRARVLAISVRRNGTRLDASVRVLVQRP-QQPKVVHPGSRVGVDVGVRRLATVATADG 237
+GRA++L +++ + RL +V ++ P + + P R G+D+GVR LATVAT D
Sbjct 248 VSGRAQILNMTLSQRWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDT 307
Query 238 TAIEQV----ENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTH 293
EQ NP PL A L R R SR GS +R +++RL RR +R
Sbjct 308 ATGEQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRRE 367
Query 294 HLHVLTTRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVW 353
H LTT LA T+G++V+E LD M K RA RR +SDAA+G L+YKT
Sbjct 368 AAHQLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAK 424
Query 354 YGSALVVADRWFPSSKTCHACRH-------VQDIG-WDEQWQCDRCSVVHQRDDCAAINL 405
L VADRWF SS+ H C +Q G D+ C V RD AA+NL
Sbjct 425 CSGVLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNL 484
Query 406 ARYEETSSIVGPVG 419
+ + +S GPVG
Sbjct 485 RDWPDNAS-RGPVG 497
>gi|289442337|ref|ZP_06432081.1| transposase [Mycobacterium tuberculosis T46]
gi|289568892|ref|ZP_06449119.1| transposase [Mycobacterium tuberculosis T17]
gi|289749446|ref|ZP_06508824.1| transposase [Mycobacterium tuberculosis T92]
gi|289752978|ref|ZP_06512356.1| transposase [Mycobacterium tuberculosis EAS054]
gi|289415256|gb|EFD12496.1| transposase [Mycobacterium tuberculosis T46]
gi|289542646|gb|EFD46294.1| transposase [Mycobacterium tuberculosis T17]
gi|289690033|gb|EFD57462.1| transposase [Mycobacterium tuberculosis T92]
gi|289693565|gb|EFD60994.1| transposase [Mycobacterium tuberculosis EAS054]
Length=550
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 180/434 (42%), Positives = 238/434 (55%), Gaps = 27/434 (6%)
Query 2 PKFEVPDGWTVQAFRFTLD-PTEDQAKALAR-HFGARRKAYNWTVATLKADIQAWHAS-G 58
P ++P GW V A +F ++ P + Q L R HFGARRKA+NW +A +KAD+ A A
Sbjct 75 PGAQLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPA 134
Query 59 TVTAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRA 118
+ L+ LR WN KDDV WW E SKE Y+ G+A + NW+ +
Sbjct 135 HESVDWDLKSLRWAWNRAKDDVA-------PWWAENSKECYSSGLADLAQGLANWKAGKN 187
Query 119 GKRAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLI 178
G R G+RVGFPRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRR++R +
Sbjct 188 GTRKGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHL 247
Query 179 KAGRARVLAISVRRNGTRLDASVRVLVQRP-QQPKVVHPGSRVGVDVGVRRLATVATADG 237
+GRA++L +++ + RL +V ++ P + + P R G+D+GVR LATVAT D
Sbjct 248 VSGRAQILNMTLSQRWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDT 307
Query 238 TAIEQV----ENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTH 293
EQ NP PL A L R R SR GS +R +++RL RR +R
Sbjct 308 ATGEQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRRE 367
Query 294 HLHVLTTRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVW 353
H LTT LA T+G++V+E LD M K RA RR +SDAA+G L+YKT
Sbjct 368 AAHQLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAK 424
Query 354 YGSALVVADRWFPSSKTCHACRH-------VQDIG-WDEQWQCDRCSVVHQRDDCAAINL 405
L VADRWF SS+ H C +Q G D+ C V RD AA+NL
Sbjct 425 CSGVLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNL 484
Query 406 ARYEETSSIVGPVG 419
+ + +S GPVG
Sbjct 485 RDWPDNAS-RGPVG 497
>gi|289757008|ref|ZP_06516386.1| transposase [Mycobacterium tuberculosis T85]
gi|294996407|ref|ZP_06802098.1| transposase [Mycobacterium tuberculosis 210]
gi|289712572|gb|EFD76584.1| transposase [Mycobacterium tuberculosis T85]
gi|326904856|gb|EGE51789.1| transposase [Mycobacterium tuberculosis W-148]
Length=550
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 180/434 (42%), Positives = 238/434 (55%), Gaps = 27/434 (6%)
Query 2 PKFEVPDGWTVQAFRFTLD-PTEDQAKALAR-HFGARRKAYNWTVATLKADIQAWHAS-G 58
P ++P GW V A +F ++ P + Q L R HFGARRKA+NW +A +KAD+ A A
Sbjct 75 PGAQLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPA 134
Query 59 TVTAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRA 118
+ L+ LR WN KDDV WW E SKE Y+ G+A + NW+ +
Sbjct 135 HESVDWDLKSLRWAWNRAKDDVA-------PWWAENSKECYSSGLADLAQDLANWKAGKN 187
Query 119 GKRAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLI 178
G R G+RVGFPRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRR++R +
Sbjct 188 GTRKGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHL 247
Query 179 KAGRARVLAISVRRNGTRLDASVRVLVQRP-QQPKVVHPGSRVGVDVGVRRLATVATADG 237
+GRA++L +++ + RL +V ++ P + + P R G+D+GVR LATVAT D
Sbjct 248 VSGRAQILNMTLSQRWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDT 307
Query 238 TAIEQV----ENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTH 293
EQ NP PL A L R R SR GS +R +++RL RR +R
Sbjct 308 ATGEQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRRE 367
Query 294 HLHVLTTRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVW 353
H LTT LA T+G++V+E LD M K RA RR +SDAA+G L+YKT
Sbjct 368 AAHQLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAK 424
Query 354 YGSALVVADRWFPSSKTCHACRH-------VQDIG-WDEQWQCDRCSVVHQRDDCAAINL 405
L VADRWF SS+ H C +Q G D+ C V RD AA+NL
Sbjct 425 CSGVLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNL 484
Query 406 ARYEETSSIVGPVG 419
+ + +S GPVG
Sbjct 485 RDWPDNAS-RGPVG 497
>gi|158316871|ref|YP_001509379.1| IS605 family transposase OrfB [Frankia sp. EAN1pec]
gi|158112276|gb|ABW14473.1| transposase, IS605 OrfB family [Frankia sp. EAN1pec]
Length=461
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/439 (41%), Positives = 229/439 (53%), Gaps = 46/439 (10%)
Query 12 VQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADI------QAWHASG-TVTAKP 64
+QA+RF LDP + Q L RH GA R +NW +A +KA + Q++ +G +T P
Sbjct 4 LQAYRFALDPNQAQLADLRRHAGAARFVFNWGLARVKAALSQRDAEQSYGLTGDMLTPVP 63
Query 65 -SLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKRAG 123
+L LR WN K V WW CSKEAY+ G+ N+ SR GKR G
Sbjct 64 WTLPALRLAWNEAKSTVA-------PWWSACSKEAYSSGLDQLARGLKNFTDSRTGKRKG 116
Query 124 KRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAGRA 183
KRVGFPRFK++GR +D +TTGA + + LP +G V+ HE + + AG A
Sbjct 117 KRVGFPRFKKRGRARDSFRYTTGAYGPASN-LQVKLPRLGRVKVHEAMGALTGRLAAGSA 175
Query 184 RVLAISVRRNGTRLDASVRVLVQR--PQQPKVVH-PGSRVGVDVGVRRLATVATADGTAI 240
R+L +V R R + V + R PQ P G VGVD GV+ LA ++T
Sbjct 176 RLLGATVSRTAGRWFVAFTVEIDREIPQNPSARQRAGGAVGVDAGVKHLAVLSTG----- 230
Query 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
EQV+NPRPL +LR LR RA +R GS R+R + LH + R LH LTT
Sbjct 231 EQVDNPRPLTRSLRRLRTASRACARSKPGSAGRRQRAAALGHLHAHIAHQRRDGLHKLTT 290
Query 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
RL + H IVVE L M+R + L R +SD + RR L+YKTVWYGS LVV
Sbjct 291 RLTKNHDVIVVEDLHVAGMVRNRRLA------RAVSDTGMAEIRRQLTYKTVWYGSRLVV 344
Query 361 ADRWFPSSKTCHAC--RHVQDIGWDEQWQCDRCSVVHQRDDCAAINL-----ARYEETSS 413
ADRW+PSSKTC C R+ D + C C +V RD AAINL A ET +
Sbjct 345 ADRWYPSSKTCSGCGWRNPSLTPADRTFACQSCGLVIDRDLNAAINLRNLVAASTSETEN 404
Query 414 IVGPVGAAVKRGADRKTGP 432
RGADR+T P
Sbjct 405 ---------ARGADRRTQP 414
>gi|289744653|ref|ZP_06504031.1| transposase [Mycobacterium tuberculosis 02_1987]
gi|289685181|gb|EFD52669.1| transposase [Mycobacterium tuberculosis 02_1987]
Length=550
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 180/434 (42%), Positives = 237/434 (55%), Gaps = 27/434 (6%)
Query 2 PKFEVPDGWTVQAFRFTLD-PTEDQAKALAR-HFGARRKAYNWTVATLKADIQAWHAS-G 58
P ++P GW V A +F ++ P + Q L R HFGARRKA+NW +A +KAD+ A A
Sbjct 75 PGAQLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPA 134
Query 59 TVTAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRA 118
+ L+ LR WN KDDV WW E SKE Y+ G A + NW+ +
Sbjct 135 HESVDWDLKSLRWAWNRAKDDVA-------PWWAENSKECYSSGSADLAQDLANWKAGKN 187
Query 119 GKRAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLI 178
G R G+RVGFPRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRR++R +
Sbjct 188 GTRKGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHL 247
Query 179 KAGRARVLAISVRRNGTRLDASVRVLVQRP-QQPKVVHPGSRVGVDVGVRRLATVATADG 237
+GRA++L +++ + RL +V ++ P + + P R G+D+GVR LATVAT D
Sbjct 248 VSGRAQILNMTLSQRWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDT 307
Query 238 TAIEQV----ENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTH 293
EQ NP PL A L R R SR GS +R +++RL RR +R
Sbjct 308 ATGEQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRRE 367
Query 294 HLHVLTTRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVW 353
H LTT LA T+G++V+E LD M K RA RR +SDAA+G L+YKT
Sbjct 368 AAHQLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAK 424
Query 354 YGSALVVADRWFPSSKTCHACRH-------VQDIG-WDEQWQCDRCSVVHQRDDCAAINL 405
L VADRWF SS+ H C +Q G D+ C V RD AA+NL
Sbjct 425 CSGVLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNL 484
Query 406 ARYEETSSIVGPVG 419
+ + +S GPVG
Sbjct 485 RDWPDNAS-RGPVG 497
>gi|86742113|ref|YP_482513.1| transposase [Frankia sp. CcI3]
gi|86568975|gb|ABD12784.1| transposase [Frankia sp. CcI3]
Length=442
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 175/433 (41%), Positives = 235/433 (55%), Gaps = 36/433 (8%)
Query 11 TVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKAD------IQAWHASG-TVTAK 63
T+QA+RF LDP + Q + RH GA R AYNW +A +KA Q++ +G +T
Sbjct 3 TLQAYRFALDPNQAQLAGIRRHAGASRFAYNWGLARVKAAHAQRDAEQSYGLTGDLLTPV 62
Query 64 P-SLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKRA 122
P +L LR WN VK D+ WW ECSKEA+ G+ N+ SR GKR
Sbjct 63 PWTLPALRLAWNAVKRDIA-------PWWDECSKEAFRAGLDQLARGLKNFTDSRQGKRK 115
Query 123 GKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAGR 182
G+RVGFPRFK++G+ +D +TTGA D ++ LP IG V+ HE + + GR
Sbjct 116 GRRVGFPRFKKRGKARDSFRYTTGAY-GPADETYVKLPRIGRVKVHEPMGALTGRLADGR 174
Query 183 ARVLAISVRRNGTRLDASVRVLVQR--PQQP-KVVHPGSRVGVDVGVRRLATVATADGTA 239
AR+ ++V R R S V V R P++P + G VGVD+GV+ LA ++T
Sbjct 175 ARLFGVTVSRTADRWFVSFTVEVDRDVPERPSRRQRAGGPVGVDLGVKHLAVLSTG---- 230
Query 240 IEQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLT 299
+ V NP+ A R LR RA +R GS R+R Q++ +H RV + R + LH LT
Sbjct 231 -QTVPNPKHYQRAERRLRRASRAHARSKPGSAGRRQRAAQLATIHVRVANQRHNGLHKLT 289
Query 300 TRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALV 359
TRLA++H +VVE L M+R + L R ++DA + RR L+YKT WYGS LV
Sbjct 290 TRLARSHDTVVVEDLHVAGMVRNRRLA------RAVADAGMAEVRRQLAYKTRWYGSTLV 343
Query 360 VADRWFPSSKTCHAC--RHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGP 417
VADRW+PSSKTC C R+ + + C C +V RD AAINL S+
Sbjct 344 VADRWYPSSKTCSGCGWRNPSLTLSERTFTCQSCGLVLDRDHNAAINLHHLVAASTPE-- 401
Query 418 VGAAVKRGADRKT 430
RGADRKT
Sbjct 402 --TENARGADRKT 412
>gi|295696698|ref|YP_003589936.1| transposase, IS605 OrfB family [Bacillus tusciae DSM 2912]
gi|295412300|gb|ADG06792.1| transposase, IS605 OrfB family [Bacillus tusciae DSM 2912]
Length=433
Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 160/394 (41%), Positives = 227/394 (58%), Gaps = 30/394 (7%)
Query 12 VQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTVTAKPSLRVLRK 71
++A+RF LDP+ Q + LA H GARR A+NW +A +K ++A V +L LR+
Sbjct 4 LEAYRFALDPSPHQERMLASHSGARRFAFNWGLALVKERLEARERGEDVEVPWTLAALRR 63
Query 72 RWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKRAGKRVGFPRF 131
WN K+ V WW E SKEAY+ G+ G + SR+GKR G+RVGFP+F
Sbjct 64 EWNRQKEQVA-------PWWRENSKEAYSAGLNGLARGLKAFFDSRSGKRKGRRVGFPKF 116
Query 132 KRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAGRARVLAISVR 191
++KGR ++ V FTTGA+RV+ D+ H+ LP IG VRTHE T + +++ RAR+L+ +V
Sbjct 117 RKKGRGRESVRFTTGAIRVD-DKSHVVLPRIGRVRTHEMTTALLERVQSDRARILSATVS 175
Query 192 RNGTRLDASVRVLVQ----RPQQPKVVHPGSRVGVDVGVRRLATVATADGTAIEQVENPR 247
R G R S V+ RP++P+ V VGVD G++ LA ++T E+V NP+
Sbjct 176 REGGRWFVSFTCEVERDAGRPKRPRDV-----VGVDAGLKHLAVLSTG-----EKVPNPQ 225
Query 248 PLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTTRLAQTHG 307
PL ALR++ + R R + SR + + +++R H RV +R +H LT RLA T G
Sbjct 226 PLRKALRKIARLNRELVRRKRRSRHWEDTRRRLNRAHARVARIRLDAMHKLTHRLATTFG 285
Query 308 RIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVVADRWFPS 367
+VVE L+ M R + L R + DA L RR L YK WYGS LV A R +PS
Sbjct 286 TVVVEDLNVAGMGRNRRLS------RAIYDAGLAELRRQLRYKCEWYGSRLVQAPRMYPS 339
Query 368 SKTCHACRHVQDI--GWDEQWQCDRCSVVHQRDD 399
SKTC C +++I W+ ++CD C V RD+
Sbjct 340 SKTCSRCGAIKEILPLWERVYRCDVCGTVMDRDE 373
>gi|158312542|ref|YP_001505050.1| IS605 family transposase OrfB [Frankia sp. EAN1pec]
gi|158107947|gb|ABW10144.1| transposase, IS605 OrfB family [Frankia sp. EAN1pec]
Length=442
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 187/462 (41%), Positives = 242/462 (53%), Gaps = 39/462 (8%)
Query 11 TVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGT-------VTAK 63
T+QA+RF LDP + QA L RH GA R AYNW +A +KA A + +T
Sbjct 3 TLQAYRFALDPNDAQAANLRRHAGAARFAYNWGLARVKAAFAQRDAEKSYGLDGDLLTPV 62
Query 64 P-SLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKRA 122
P +L LR WN K DV WW ECSKEAY+ G+ A N+ SR GKR
Sbjct 63 PWTLPALRLAWNAAKRDVA-------PWWDECSKEAYSAGLDQLARALKNFTDSRKGKRN 115
Query 123 GKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAGR 182
G+RVGFPRFK++G+ +D +TTGA D ++ LP IG V+ E + + GR
Sbjct 116 GRRVGFPRFKKRGKARDSFRYTTGAYGPATD-LYVKLPRIGRVKVGEPMGALTSRLADGR 174
Query 183 ARVLAISVRRNGTRLDASVRVLVQRPQQPKVVH---PGSRVGVDVGVRRLATVATADGTA 239
AR+ +V R R + V R + G VGVD+GV+ LA ++T
Sbjct 175 ARLGGATVSRTAGRWFVAFTVDTDRDVSERPTRRQWTGGTVGVDLGVKHLAVLSTG---- 230
Query 240 IEQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLT 299
E V NP+ AALR+LR RA +R GS R+R ++ +H RV + R LH LT
Sbjct 231 -ETVANPKRHAAALRKLRRASRAYARSKPGSAGRRQRAAGLATIHARVANQRRDGLHKLT 289
Query 300 TRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALV 359
TRLA++H IVVE L M+R + L R +SD +G RR L YKT WYGS L
Sbjct 290 TRLARSHDVIVVEDLHVAGMVRNRRLA------RAVSDVGMGEIRRQLDYKTRWYGSRLH 343
Query 360 VADRWFPSSKTCHAC--RHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGP 417
VADRW+PSSKTC C R+ D ++C C +V RD AAINL R++ +S
Sbjct 344 VADRWYPSSKTCSGCGWRNPSLTLSDRTFRCQSCGLVADRDHNAAINL-RHQVAASTSET 402
Query 418 VGAAVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRD-GVQV 458
V A RGAD KT R +G ++ A Q R G QV
Sbjct 403 VNA---RGADHKT--RTSGQVAGKREPGTAKAGQTRSAGAQV 439
>gi|158317425|ref|YP_001509933.1| IS605 family transposase OrfB [Frankia sp. EAN1pec]
gi|158112830|gb|ABW15027.1| transposase, IS605 OrfB family [Frankia sp. EAN1pec]
Length=442
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 187/462 (41%), Positives = 241/462 (53%), Gaps = 39/462 (8%)
Query 11 TVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGT-------VTAK 63
T+QA+RF LDP + QA L RH GA R AYNW +A +KA A + +T
Sbjct 3 TLQAYRFALDPNDAQAANLRRHAGAARFAYNWGLARVKATFAQRDAEKSYGLDGDLLTPV 62
Query 64 P-SLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGKRA 122
P +L LR WN K DV WW ECSKEAY+ G+ A N+ SR GKR
Sbjct 63 PWTLPALRLAWNAAKRDVA-------PWWDECSKEAYSAGLDQLARALKNFTDSRKGKRN 115
Query 123 GKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKAGR 182
G+RVGFPRFK++G+ +D +TTGA D ++ LP IG V+ E + + GR
Sbjct 116 GRRVGFPRFKKRGKARDSFRYTTGAYGPATD-LYVKLPRIGRVKVGEPMGALTSRLADGR 174
Query 183 ARVLAISVRRNGTRLDASVRVLVQRPQQPKVVH---PGSRVGVDVGVRRLATVATADGTA 239
AR+ +V R R + V R + G VGVD+GV+ LA ++T
Sbjct 175 ARLGGATVSRTAGRWFVAFTVDTDRDVSERPTRRQWTGGTVGVDLGVKHLAVLSTG---- 230
Query 240 IEQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLT 299
E V NP+ AALR+LR RA +R GS R+R ++ +H RV + R LH LT
Sbjct 231 -ETVANPKRHAAALRKLRRASRAYARSKPGSAGRRQRAAGLATIHARVANQRRDGLHKLT 289
Query 300 TRLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALV 359
TRLA++H IVVE L M+R + L R +SD +G RR L YKT WYGS L
Sbjct 290 TRLARSHDVIVVEDLHVAGMVRNRRLA------RAVSDVGMGEIRRQLDYKTRWYGSRLH 343
Query 360 VADRWFPSSKTCHAC--RHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGP 417
VADRW+PSSKTC C R+ D + C C +V RD AAINL R++ +S
Sbjct 344 VADRWYPSSKTCSGCGWRNPSLTLSDRTFACQSCGLVADRDHNAAINL-RHQVAASTSET 402
Query 418 VGAAVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRD-GVQV 458
V A RGAD KT R +G ++ A Q R G QV
Sbjct 403 VNA---RGADHKT--RTSGQVAGKREPGTAKAGQTRSAGAQV 439
Lambda K H
0.321 0.133 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 961283664824
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40