BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2979c

Length=194
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610116|ref|NP_217495.1|  resolvase [Mycobacterium tuberculos...   392    1e-107
gi|289444543|ref|ZP_06434287.1|  resolvase [Mycobacterium tubercu...   388    2e-106
gi|31794155|ref|NP_856648.1|  resolvase [Mycobacterium bovis AF21...   383    6e-105
gi|167969029|ref|ZP_02551306.1|  hypothetical resolvase [Mycobact...   295    3e-78 
gi|15607745|ref|NP_215119.1|  resolvase [Mycobacterium tuberculos...   295    3e-78 
gi|326904407|gb|EGE51340.1|  resolvase [Mycobacterium tuberculosi...   292    1e-77 
gi|15609929|ref|NP_217308.1|  resolvase [Mycobacterium tuberculos...   292    1e-77 
gi|31793968|ref|NP_856461.1|  resolvase [Mycobacterium bovis AF21...   292    2e-77 
gi|289575490|ref|ZP_06455717.1|  resolvase [Mycobacterium tubercu...   292    2e-77 
gi|306774711|ref|ZP_07413048.1|  resolvase [Mycobacterium tubercu...   292    2e-77 
gi|289446158|ref|ZP_06435902.1|  resolvase [Mycobacterium tubercu...   291    3e-77 
gi|333921804|ref|YP_004495385.1|  putative resolvase [Amycolicico...   279    1e-73 
gi|167969943|ref|ZP_02552220.1|  hypothetical resolvase [Mycobact...   267    5e-70 
gi|298527303|ref|ZP_07014712.1|  conserved hypothetical protein [...   267    6e-70 
gi|15610964|ref|NP_218345.1|  resolvase [Mycobacterium tuberculos...   267    7e-70 
gi|289747670|ref|ZP_06507048.1|  resolvase [Mycobacterium tubercu...   265    2e-69 
gi|340628797|ref|YP_004747249.1|  putative resolvase [Mycobacteri...   264    6e-69 
gi|289571177|ref|ZP_06451404.1|  conserved hypothetical protein [...   262    2e-68 
gi|294993043|ref|ZP_06798734.1|  resolvase [Mycobacterium tubercu...   259    2e-67 
gi|333920658|ref|YP_004494239.1|  putative resolvase [Amycolicico...   256    9e-67 
gi|333921217|ref|YP_004494798.1|  putative resolvase [Amycolicico...   252    2e-65 
gi|289749103|ref|ZP_06508481.1|  resolvase [Mycobacterium tubercu...   251    3e-65 
gi|86741374|ref|YP_481774.1|  resolvase-like protein [Frankia sp....   243    8e-63 
gi|158312541|ref|YP_001505049.1|  resolvase domain-containing pro...   235    3e-60 
gi|86742114|ref|YP_482514.1|  resolvase-like protein [Frankia sp....   225    3e-57 
gi|315081078|gb|EFT53054.1|  resolvase protein [Propionibacterium...   225    3e-57 
gi|314973967|gb|EFT18063.1|  resolvase protein [Propionibacterium...   224    4e-57 
gi|327446282|gb|EGE92936.1|  resolvase protein [Propionibacterium...   224    5e-57 
gi|315092548|gb|EFT64524.1|  resolvase protein [Propionibacterium...   221    3e-56 
gi|314929732|gb|EFS93563.1|  resolvase protein [Propionibacterium...   219    1e-55 
gi|328905690|gb|EGG25468.1|  resolvase [Propionibacterium humerus...   219    2e-55 
gi|288921956|ref|ZP_06416167.1|  Resolvase domain protein [Franki...   217    7e-55 
gi|340627876|ref|YP_004746328.1|  putative resolvase [Mycobacteri...   215    3e-54 
gi|240171118|ref|ZP_04749777.1|  putative resolvase [Mycobacteriu...   208    3e-52 
gi|158313451|ref|YP_001505959.1|  resolvase domain-containing pro...   202    2e-50 
gi|167969514|ref|ZP_02551791.1|  IS1539 resolvase [Mycobacterium ...   202    3e-50 
gi|15610023|ref|NP_217402.1|  resolvase [Mycobacterium tuberculos...   202    3e-50 
gi|326904500|gb|EGE51433.1|  resolvase [Mycobacterium tuberculosi...   201    3e-50 
gi|258512473|ref|YP_003185907.1|  Resolvase domain-containing pro...   201    6e-50 
gi|339287910|gb|AEJ42020.1|  Resolvase domain protein [Alicycloba...   200    7e-50 
gi|148824076|ref|YP_001288829.1|  resolvase [Mycobacterium tuberc...   200    1e-49 
gi|288919761|ref|ZP_06414087.1|  Resolvase domain protein [Franki...   199    1e-49 
gi|294994020|ref|ZP_06799711.1|  resolvase [Mycobacterium tubercu...   199    2e-49 
gi|15608061|ref|NP_215436.1|  resolvase [Mycobacterium tuberculos...   198    3e-49 
gi|340625932|ref|YP_004744384.1|  putative resolvase [Mycobacteri...   198    4e-49 
gi|339290995|gb|AEJ45105.1|  Resolvase domain protein [Alicycloba...   197    7e-49 
gi|289752977|ref|ZP_06512355.1|  resolvase [Mycobacterium tubercu...   197    9e-49 
gi|339290736|gb|AEJ44846.1|  Resolvase domain protein [Alicycloba...   196    1e-48 
gi|295696699|ref|YP_003589937.1|  Resolvase domain-containing pro...   194    4e-48 
gi|158317728|ref|YP_001510236.1|  resolvase domain-containing pro...   194    8e-48 


>gi|15610116|ref|NP_217495.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15842533|ref|NP_337570.1| IS1538 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|148662829|ref|YP_001284352.1| IS1538 resolvase [Mycobacterium tuberculosis H37Ra]
 47 more sequence titles
 Length=194

 Score =  392 bits (1008),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 194/194 (100%), Positives = 194/194 (100%), Gaps = 0/194 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS
Sbjct  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR
Sbjct  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK
Sbjct  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180

Query  181  RALAAAAGEDHEAA  194
            RALAAAAGEDHEAA
Sbjct  181  RALAAAAGEDHEAA  194


>gi|289444543|ref|ZP_06434287.1| resolvase [Mycobacterium tuberculosis T46]
 gi|289448651|ref|ZP_06438395.1| resolvase [Mycobacterium tuberculosis CPHL_A]
 gi|289575686|ref|ZP_06455913.1| resolvase [Mycobacterium tuberculosis K85]
 23 more sequence titles
 Length=194

 Score =  388 bits (997),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 193/194 (99%), Positives = 193/194 (99%), Gaps = 0/194 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLATWAERNGVA GTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS
Sbjct  1    MNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR
Sbjct  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK
Sbjct  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180

Query  181  RALAAAAGEDHEAA  194
            RALAAAAGEDHEAA
Sbjct  181  RALAAAAGEDHEAA  194


>gi|31794155|ref|NP_856648.1| resolvase [Mycobacterium bovis AF2122/97]
 gi|121638860|ref|YP_979084.1| putative resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224991352|ref|YP_002646041.1| putative resolvase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31619750|emb|CAD96690.1| PROBABLE RESOLVASE [Mycobacterium bovis AF2122/97]
 gi|121494508|emb|CAL72989.1| Probable resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224774467|dbj|BAH27273.1| putative resolvase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341602899|emb|CCC65577.1| probable resolvase [Mycobacterium bovis BCG str. Moreau RDJ]
Length=194

 Score =  383 bits (984),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 191/194 (99%), Positives = 191/194 (99%), Gaps = 0/194 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLATWAERNGVA GTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS
Sbjct  1    MNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQKADLDRQVARVTAWA AQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR
Sbjct  61   ADQKADLDRQVARVTAWAAAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFCRLGSKYVQAAFAAQGRELVVVDSAEV DDLVRDMTEILTSMCARLYGKRAAENRTK
Sbjct  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVGDDLVRDMTEILTSMCARLYGKRAAENRTK  180

Query  181  RALAAAAGEDHEAA  194
            RALAAAAGEDHEAA
Sbjct  181  RALAAAAGEDHEAA  194


>gi|167969029|ref|ZP_02551306.1| hypothetical resolvase [Mycobacterium tuberculosis H37Ra]
 gi|254230942|ref|ZP_04924269.1| hypothetical protein TBCG_00600 [Mycobacterium tuberculosis C]
 gi|254549562|ref|ZP_05140009.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 26 more sequence titles
 Length=194

 Score =  295 bits (755),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 158/194 (82%), Positives = 171/194 (89%), Gaps = 0/194 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA  TAYRWF AGLL V AR+VGRLILVDE A +AG +  TAVYARVSS
Sbjct  1    MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK+DLDRQVARVT+WATA+Q+PVDKVVTEVGS  N HRRKF ++LRD SV RIVVEHR
Sbjct  61   ADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFCR GS+YV AA AAQGRELVVVDSAEVDDDLV DMTEILTSMCARLYGKRAA+NR K
Sbjct  121  DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQNRAK  180

Query  181  RALAAAAGEDHEAA  194
            RA+AAAA +DHEAA
Sbjct  181  RAVAAAAVDDHEAA  194


>gi|15607745|ref|NP_215119.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15840006|ref|NP_335043.1| IS1536 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31791787|ref|NP_854280.1| resolvase [Mycobacterium bovis AF2122/97]
 39 more sequence titles
 Length=202

 Score =  295 bits (754),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 158/194 (82%), Positives = 171/194 (89%), Gaps = 0/194 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA  TAYRWF AGLL V AR+VGRLILVDE A +AG +  TAVYARVSS
Sbjct  9    MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS  68

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK+DLDRQVARVT+WATA+Q+PVDKVVTEVGS  N HRRKF ++LRD SV RIVVEHR
Sbjct  69   ADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR  128

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFCR GS+YV AA AAQGRELVVVDSAEVDDDLV DMTEILTSMCARLYGKRAA+NR K
Sbjct  129  DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQNRAK  188

Query  181  RALAAAAGEDHEAA  194
            RA+AAAA +DHEAA
Sbjct  189  RAVAAAAVDDHEAA  202


>gi|326904407|gb|EGE51340.1| resolvase [Mycobacterium tuberculosis W-148]
 gi|328457897|gb|AEB03320.1| resolvase [Mycobacterium tuberculosis KZN 4207]
Length=201

 Score =  292 bits (748),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 147/178 (83%), Positives = 156/178 (88%), Gaps = 0/178 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA  TAYRWF AGLL V AR+ GRLILVD+   D   R+ TAVYARVSS
Sbjct  9    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  68

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK DLDRQVARVTAWAT +Q+ VDKVVTEVGSA N HRRKFL+LLRDPSV RIVVEHR
Sbjct  69   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  128

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENR  178
            DRFCR GS+YV+AA AAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAA+NR
Sbjct  129  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNR  186


>gi|15609929|ref|NP_217308.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15842330|ref|NP_337367.1| IS1602 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|121638672|ref|YP_978896.1| putative resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 74 more sequence titles
 Length=193

 Score =  292 bits (748),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 147/178 (83%), Positives = 156/178 (88%), Gaps = 0/178 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA  TAYRWF AGLL V AR+ GRLILVD+   D   R+ TAVYARVSS
Sbjct  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK DLDRQVARVTAWAT +Q+ VDKVVTEVGSA N HRRKFL+LLRDPSV RIVVEHR
Sbjct  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENR  178
            DRFCR GS+YV+AA AAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAA+NR
Sbjct  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNR  178


>gi|31793968|ref|NP_856461.1| resolvase [Mycobacterium bovis AF2122/97]
 gi|31619562|emb|CAD95000.1| POSSIBLE RESOLVASE [Mycobacterium bovis AF2122/97]
Length=193

 Score =  292 bits (748),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 147/178 (83%), Positives = 156/178 (88%), Gaps = 0/178 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA  T YRWF AGLL V AR+ GRLILVD+   D   R+ TAVYARVSS
Sbjct  1    MNLAVWAERNGVARVTVYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK DLDRQVARVTAWATA+Q+ VDKVVTEVGSA N HRRKFL+LLRDPSV RIVVEHR
Sbjct  61   ADQKPDLDRQVARVTAWATAEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENR  178
            DRFCR GS+YV+AA AAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAA+NR
Sbjct  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNR  178


>gi|289575490|ref|ZP_06455717.1| resolvase [Mycobacterium tuberculosis K85]
 gi|289539921|gb|EFD44499.1| resolvase [Mycobacterium tuberculosis K85]
Length=193

 Score =  292 bits (748),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 146/178 (83%), Positives = 156/178 (88%), Gaps = 0/178 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNG+A  TAYRWF AGLL V AR+ GRLILVD+   D   R+ TAVYARVSS
Sbjct  1    MNLAVWAERNGIARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK DLDRQVARVTAWAT +Q+ VDKVVTEVGSA N HRRKFL+LLRDPSV RIVVEHR
Sbjct  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENR  178
            DRFCR GS+YV+AA AAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAA+NR
Sbjct  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNR  178


>gi|306774711|ref|ZP_07413048.1| resolvase [Mycobacterium tuberculosis SUMu001]
 gi|306970815|ref|ZP_07483476.1| resolvase [Mycobacterium tuberculosis SUMu010]
 gi|307078538|ref|ZP_07487708.1| resolvase [Mycobacterium tuberculosis SUMu011]
 gi|308216606|gb|EFO76005.1| resolvase [Mycobacterium tuberculosis SUMu001]
 gi|308359602|gb|EFP48453.1| resolvase [Mycobacterium tuberculosis SUMu010]
 gi|308363530|gb|EFP52381.1| resolvase [Mycobacterium tuberculosis SUMu011]
Length=194

 Score =  292 bits (747),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 157/194 (81%), Positives = 170/194 (88%), Gaps = 0/194 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA  TAYRWF AGLL V AR+VGRLILVDE A +AG +  TAVYARVSS
Sbjct  1    MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK+DLDRQVARVT+WATA+ +PVDKVVTEVGS  N HRRKF ++LRD SV RIVVEHR
Sbjct  61   ADQKSDLDRQVARVTSWATAEPIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFCR GS+YV AA AAQGRELVVVDSAEVDDDLV DMTEILTSMCARLYGKRAA+NR K
Sbjct  121  DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQNRAK  180

Query  181  RALAAAAGEDHEAA  194
            RA+AAAA +DHEAA
Sbjct  181  RAVAAAAVDDHEAA  194


>gi|289446158|ref|ZP_06435902.1| resolvase [Mycobacterium tuberculosis CPHL_A]
 gi|289419116|gb|EFD16317.1| resolvase [Mycobacterium tuberculosis CPHL_A]
Length=202

 Score =  291 bits (746),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 157/194 (81%), Positives = 170/194 (88%), Gaps = 0/194 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA  TAYRWF AGLL V AR+VGRLILVDE A +AG +  TAVYARVSS
Sbjct  9    MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS  68

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK+DLDRQVARVT+WATA+Q+PVDKVVTEVGS  N HRRKF ++LRD SV RIVVEHR
Sbjct  69   ADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR  128

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFCR GS+YV AA AAQGRELVVVDSAE DDDLV DMTEILTSMCARLYGKRAA+NR K
Sbjct  129  DRFCRFGSEYVHAALAAQGRELVVVDSAEGDDDLVWDMTEILTSMCARLYGKRAAQNRAK  188

Query  181  RALAAAAGEDHEAA  194
            RA+AAAA +DHEAA
Sbjct  189  RAVAAAAVDDHEAA  202


>gi|333921804|ref|YP_004495385.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
 gi|333484025|gb|AEF42585.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=195

 Score =  279 bits (714),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 138/171 (81%), Positives = 151/171 (89%), Gaps = 0/171 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLATWA+RNGVA  TAYRWFR+GLL V AR+VGRLILVD+PA +      TAVYARVSS
Sbjct  1    MNLATWAQRNGVARVTAYRWFRSGLLPVPARKVGRLILVDDPAAEMQSSGCTAVYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQKADL RQVARVTAWAT +++PVDKVVTEVGSA N HRRKFL+LLRDPS+ RIVVEHR
Sbjct  61   ADQKADLHRQVARVTAWATDRRIPVDKVVTEVGSALNGHRRKFLALLRDPSIARIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYG  171
            DRFCR GS+YVQAA AA GRELVV+DS+EVDDDLVRDMTEILTSMCARLY 
Sbjct  121  DRFCRFGSEYVQAALAAHGRELVVIDSSEVDDDLVRDMTEILTSMCARLYS  171


>gi|167969943|ref|ZP_02552220.1| hypothetical resolvase [Mycobacterium tuberculosis H37Ra]
 gi|297636511|ref|ZP_06954291.1| resolvase [Mycobacterium tuberculosis KZN 4207]
 gi|297733506|ref|ZP_06962624.1| resolvase [Mycobacterium tuberculosis KZN R506]
 26 more sequence titles
 Length=193

 Score =  267 bits (683),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 137/183 (75%), Positives = 151/183 (83%), Gaps = 0/183 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA   AYRWFRAGLL V A+RVGRLILV++PA +   R  T VYARVSS
Sbjct  1    MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQ++DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP V RIVVEHR
Sbjct  61   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFC  GS+YV+AA  AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAA+N  K
Sbjct  121  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  180

Query  181  RAL  183
            RAL
Sbjct  181  RAL  183


>gi|298527303|ref|ZP_07014712.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298497097|gb|EFI32391.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|328460604|gb|AEB06027.1| resolvase [Mycobacterium tuberculosis KZN 4207]
Length=201

 Score =  267 bits (683),  Expect = 6e-70, Method: Compositional matrix adjust.
 Identities = 137/183 (75%), Positives = 151/183 (83%), Gaps = 0/183 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA   AYRWFRAGLL V A+RVGRLILV++PA +   R  T VYARVSS
Sbjct  9    MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  68

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQ++DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP V RIVVEHR
Sbjct  69   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  128

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFC  GS+YV+AA  AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAA+N  K
Sbjct  129  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  188

Query  181  RAL  183
            RAL
Sbjct  189  RAL  191


>gi|15610964|ref|NP_218345.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15843452|ref|NP_338489.1| IS1537 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31795002|ref|NP_857495.1| resolvase [Mycobacterium bovis AF2122/97]
 40 more sequence titles
 Length=203

 Score =  267 bits (682),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 137/183 (75%), Positives = 151/183 (83%), Gaps = 0/183 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA   AYRWFRAGLL V A+RVGRLILV++PA +   R  T VYARVSS
Sbjct  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQ++DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP V RIVVEHR
Sbjct  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFC  GS+YV+AA  AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAA+N  K
Sbjct  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190

Query  181  RAL  183
            RAL
Sbjct  191  RAL  193


>gi|289747670|ref|ZP_06507048.1| resolvase [Mycobacterium tuberculosis 02_1987]
 gi|289688198|gb|EFD55686.1| resolvase [Mycobacterium tuberculosis 02_1987]
Length=203

 Score =  265 bits (678),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 136/183 (75%), Positives = 150/183 (82%), Gaps = 0/183 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA   AYRWFRAGLL V A+RVGRLILV++PA +   R  T VYARVSS
Sbjct  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQ++DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP V RIVVEHR
Sbjct  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFC  GS+YV+AA  AQGRELVVVD  EVDDDLV DMTEILTSMCARLYG+RAA+N  K
Sbjct  131  DRFCWFGSEYVEAALVAQGRELVVVDLPEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190

Query  181  RAL  183
            RAL
Sbjct  191  RAL  193


>gi|340628797|ref|YP_004747249.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
 gi|340006987|emb|CCC46178.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=203

 Score =  264 bits (674),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 135/183 (74%), Positives = 149/183 (82%), Gaps = 0/183 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAERNGVA   AYRWFRAGLL V A+RVGRLILV++PA +   R  T VYARVSS
Sbjct  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTVVYARVSS  70

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQ++DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP V RIV EHR
Sbjct  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVAEHR  130

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFC  GS+YV+AA  AQGRELVVVD AEVDDDLV DM EILTSMCARLYG+RAA+N  K
Sbjct  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMIEILTSMCARLYGERAAQNGAK  190

Query  181  RAL  183
            RAL
Sbjct  191  RAL  193


>gi|289571177|ref|ZP_06451404.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289544931|gb|EFD48579.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=162

 Score =  262 bits (669),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 135/149 (91%), Positives = 136/149 (92%), Gaps = 1/149 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLATWAERNGVA GTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS
Sbjct  11   MNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  70

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR
Sbjct  71   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  130

Query  121  DRFCR-LGSKYVQAAFAAQGRELVVVDSA  148
            DR          +  FAAQGRELVVVDSA
Sbjct  131  DRVLPGWARSTCRQRFAAQGRELVVVDSA  159


>gi|294993043|ref|ZP_06798734.1| resolvase [Mycobacterium tuberculosis 210]
 gi|339296637|gb|AEJ48748.1| resolvase [Mycobacterium tuberculosis CCDC5079]
 gi|339300234|gb|AEJ52344.1| resolvase [Mycobacterium tuberculosis CCDC5180]
Length=189

 Score =  259 bits (661),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 133/178 (75%), Positives = 147/178 (83%), Gaps = 0/178 (0%)

Query  6    WAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSSADQKA  65
            WAERNGVA   AYRWFRAGLL V A+RVGRLILV++PA +   R  T VYARVSSADQ++
Sbjct  2    WAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQRS  61

Query  66   DLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHRDRFCR  125
            DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP V RIVVEHRDRFC 
Sbjct  62   DLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFCW  121

Query  126  LGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTKRAL  183
             GS+YV+AA  AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAA+N  KRAL
Sbjct  122  FGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAKRAL  179


>gi|333920658|ref|YP_004494239.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
 gi|333482879|gb|AEF41439.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=215

 Score =  256 bits (655),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 139/187 (75%), Positives = 152/187 (82%), Gaps = 0/187 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLATWA+RNGVA  TAYRWFR+G L V AR+ G LILV +P  +      TAVYA VSS
Sbjct  21   MNLATWAQRNGVARVTAYRWFRSGSLPVPARKAGGLILVGDPTTNTQSHGRTAVYAGVSS  80

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQKA LDRQVARVTAWA ++++ V KVVTEVGSA N HR KFL+LLRDP V RIVVEHR
Sbjct  81   ADQKAGLDRQVARVTAWAASERIGVGKVVTEVGSALNGHRGKFLALLRDPIVTRIVVEHR  140

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFCR GS+YVQAA AA G  LVVVDS EVDDDLVRDMTEILTSMCARLYGKRAA +R K
Sbjct  141  DRFCRFGSEYVQAALAANGGALVVVDSCEVDDDLVRDMTEILTSMCARLYGKRAAVHRAK  200

Query  181  RALAAAA  187
            RA+AA A
Sbjct  201  RAVAATA  207


>gi|333921217|ref|YP_004494798.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
 gi|333483438|gb|AEF41998.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=215

 Score =  252 bits (643),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 137/187 (74%), Positives = 150/187 (81%), Gaps = 0/187 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLATWA+RNGV   TAYRWFR+G L V AR+ G LILV +P  +      TAVYA VSS
Sbjct  21   MNLATWAQRNGVGRVTAYRWFRSGSLPVPARKAGGLILVGDPTTNTQSHGRTAVYAGVSS  80

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQKA LDRQVARVTAWA ++++ V KVVTEVGSA N HR KFL+LLRDP V RIVVEHR
Sbjct  81   ADQKAGLDRQVARVTAWAASERIGVGKVVTEVGSALNGHRGKFLALLRDPIVTRIVVEHR  140

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DRFCR GS+ VQAA AA G  LVVVDS EVDDDLVRDMTEILTSMCARLYGKRAA +R K
Sbjct  141  DRFCRFGSECVQAALAANGGALVVVDSCEVDDDLVRDMTEILTSMCARLYGKRAAVHRAK  200

Query  181  RALAAAA  187
            RA+AA A
Sbjct  201  RAVAATA  207


>gi|289749103|ref|ZP_06508481.1| resolvase [Mycobacterium tuberculosis T92]
 gi|289689690|gb|EFD57119.1| resolvase [Mycobacterium tuberculosis T92]
Length=172

 Score =  251 bits (642),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 137/171 (81%), Positives = 150/171 (88%), Gaps = 0/171 (0%)

Query  24   GLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSSADQKADLDRQVARVTAWATAQQM  83
            G   V AR+VGRLILVDE A +AG +  TAVYARVSSADQK+DLDRQVARVT+WATA+Q+
Sbjct  2    GSCPVPARKVGRLILVDELASEAGAQPKTAVYARVSSADQKSDLDRQVARVTSWATAEQI  61

Query  84   PVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHRDRFCRLGSKYVQAAFAAQGRELV  143
            PVDKVVTEVGS  N HRRKF ++LRD SV RIVVEHRDRFCR GS+YV AA AAQGRELV
Sbjct  62   PVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHRDRFCRFGSEYVHAALAAQGRELV  121

Query  144  VVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTKRALAAAAGEDHEAA  194
            VVDSAEVDDDLV DMTEILTSMCARLYGKRAA+NR KRA+AAAA +DHEAA
Sbjct  122  VVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQNRAKRAVAAAAVDDHEAA  172


>gi|86741374|ref|YP_481774.1| resolvase-like protein [Frankia sp. CcI3]
 gi|86568236|gb|ABD12045.1| Resolvase-like [Frankia sp. CcI3]
Length=190

 Score =  243 bits (621),  Expect = 8e-63, Method: Compositional matrix adjust.
 Identities = 129/180 (72%), Positives = 144/180 (80%), Gaps = 7/180 (3%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILV---DEPAGDAGMRSPTAVYAR  57
            MNL  WAE  GVA  TA RW+ AG L V ARRVG LILV   D+P GD G+   TAVYAR
Sbjct  1    MNLKEWAESQGVAYVTARRWYAAGKLPVPARRVGGLILVGEPDQPTGD-GL---TAVYAR  56

Query  58   VSSADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVV  117
            VSSADQ+ DLDRQVARVTAWAT Q +PVDKVVTEVGSA N HRRKFL+LLRDP V  IVV
Sbjct  57   VSSADQRPDLDRQVARVTAWATGQNLPVDKVVTEVGSALNGHRRKFLALLRDPDVATIVV  116

Query  118  EHRDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAEN  177
            E+RDRF R G++YV+AA +AQGR L+VVD  EVDDDLV D+TEILTS+CARLYG+RAA N
Sbjct  117  EYRDRFARFGAEYVEAALSAQGRRLLVVDPGEVDDDLVGDVTEILTSLCARLYGRRAAVN  176


>gi|158312541|ref|YP_001505049.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
 gi|158317424|ref|YP_001509932.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
 gi|158107946|gb|ABW10143.1| Resolvase domain [Frankia sp. EAN1pec]
 gi|158112829|gb|ABW15026.1| Resolvase domain [Frankia sp. EAN1pec]
Length=190

 Score =  235 bits (599),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 122/171 (72%), Positives = 133/171 (78%), Gaps = 1/171 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNL  WAE  GVA  TA RWF AG L V AR+VG LILV EP   A       VYARVSS
Sbjct  1    MNLKEWAESQGVAYVTAQRWFHAGKLPVPARKVGGLILVGEPDRPA-TSGTVVVYARVSS  59

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK+DLDRQVA VT WAT Q +PVD+VVTEVGSA N HRRKFL+LLRDP+   IVVEHR
Sbjct  60   ADQKSDLDRQVACVTGWATGQGLPVDRVVTEVGSALNGHRRKFLALLRDPAATTIVVEHR  119

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYG  171
            DRF R G++YV+AA AA GR L+VVD AEVDDDLVRD+TEILTSMCARLYG
Sbjct  120  DRFARFGAEYVEAALAANGRRLLVVDPAEVDDDLVRDITEILTSMCARLYG  170


>gi|86742114|ref|YP_482514.1| resolvase-like protein [Frankia sp. CcI3]
 gi|86568976|gb|ABD12785.1| Resolvase-like [Frankia sp. CcI3]
Length=197

 Score =  225 bits (573),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 115/171 (68%), Positives = 131/171 (77%), Gaps = 1/171 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            +NL  WA  NGV   TA RW+R GLL V AR+VG L+LVDE    AG R    VYARVSS
Sbjct  8    VNLKEWAAANGVGYTTARRWYRDGLLPVPARKVGGLVLVDESTVPAG-RPVAVVYARVSS  66

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK DLDRQVAR+  WA +Q + V +VVTEVGSA N HRRKFL LLRDP+V  IVVEHR
Sbjct  67   ADQKPDLDRQVARIVTWAASQNLAVGRVVTEVGSALNGHRRKFLGLLRDPAVATIVVEHR  126

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYG  171
            DRF R G++YV+AA +AQGR L+VVD  EVDDDLV D+TEILTS+CARLYG
Sbjct  127  DRFARFGAEYVEAALSAQGRRLLVVDPGEVDDDLVGDVTEILTSLCARLYG  177


>gi|315081078|gb|EFT53054.1| resolvase protein [Propionibacterium acnes HL078PA1]
Length=206

 Score =  225 bits (573),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 114/200 (57%), Positives = 146/200 (73%), Gaps = 6/200 (3%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVD-EPAG---DAGMRSPTAV--  54
            MNL  WA   G++  TA RW+  GL+ V  RRVGRL+LVD +  G   +     PT V  
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVDCDEHGLPFEGSTFGPTKVII  60

Query  55   YARVSSADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHR  114
            YARVSSADQK+DLDRQ+ARV  WA+A+++ VD VVTEVGS  + HR+KF  LLRD SV  
Sbjct  61   YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGSVRT  120

Query  115  IVVEHRDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCR GS+Y++AA +AQ R LVVVD  E++DDLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLVVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AENRTKRALAAAAGEDHEAA  194
            A++R ++A+      D E +
Sbjct  181  AKHRARKAVETVMTTDGEES  200


>gi|314973967|gb|EFT18063.1| resolvase protein [Propionibacterium acnes HL053PA1]
Length=206

 Score =  224 bits (572),  Expect = 4e-57, Method: Compositional matrix adjust.
 Identities = 111/200 (56%), Positives = 144/200 (72%), Gaps = 6/200 (3%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVD------EPAGDAGMRSPTAV  54
            MNL  WA   G++  TA RW+  GL+ V  RRVGRL+LVD         G     + T +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVDCDEHGLPFEGSTFEPTKTII  60

Query  55   YARVSSADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHR  114
            YARVSSADQK+DLDRQ+ARV  WA+A+++ VD VVTEVGS  + HR+KF  LLRD SV  
Sbjct  61   YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGSVRT  120

Query  115  IVVEHRDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCR GS+Y++AA +AQ R LVVVD  E+++DLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLVVVDDKEIENDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AENRTKRALAAAAGEDHEAA  194
            A++R ++A+      D E +
Sbjct  181  AKHRARKAVETVMTTDGEES  200


>gi|327446282|gb|EGE92936.1| resolvase protein [Propionibacterium acnes HL043PA1]
 gi|327451294|gb|EGE97948.1| resolvase protein [Propionibacterium acnes HL043PA2]
Length=206

 Score =  224 bits (571),  Expect = 5e-57, Method: Compositional matrix adjust.
 Identities = 111/200 (56%), Positives = 144/200 (72%), Gaps = 6/200 (3%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVD------EPAGDAGMRSPTAV  54
            MNL  WA   G++  TA RW+  GL+ V  RRVGRL+LVD         G     + T +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVDCDEHGLPFEGSTFEPTKTII  60

Query  55   YARVSSADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHR  114
            YARVSSADQK+DLDRQ+ARV  WA+A+++ VD VVTEVGS  + HR+KF  LLRD SV  
Sbjct  61   YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGSVRT  120

Query  115  IVVEHRDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCR GS+Y++AA +AQ R L+VVD  E++DDLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AENRTKRALAAAAGEDHEAA  194
            A++R ++A+      D E +
Sbjct  181  AKHRARKAVENVMTTDGEES  200


>gi|315092548|gb|EFT64524.1| resolvase protein [Propionibacterium acnes HL110PA4]
Length=206

 Score =  221 bits (564),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 109/200 (55%), Positives = 143/200 (72%), Gaps = 6/200 (3%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVD------EPAGDAGMRSPTAV  54
            MNL  WA   G++  TA RW+  GL+ V   RVGRL+LVD         G     + T +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVDCDEHGLPFEGSTFEPTKTII  60

Query  55   YARVSSADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHR  114
            YARVSSADQK+DLDRQ+ARV  WA+A+++ VD VVTEVGS  + HR+KF  LL+D SV  
Sbjct  61   YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGSVRT  120

Query  115  IVVEHRDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCR GS+Y++AA +AQ R L+VVD  E++DDLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AENRTKRALAAAAGEDHEAA  194
            A++R ++A+      D E +
Sbjct  181  AKHRARKAVETVMITDGEES  200


>gi|314929732|gb|EFS93563.1| resolvase protein [Propionibacterium acnes HL044PA1]
Length=206

 Score =  219 bits (559),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 107/192 (56%), Positives = 139/192 (73%), Gaps = 6/192 (3%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVD------EPAGDAGMRSPTAV  54
            MNL  WA   G++  TA RW+  GL+ V   RVGRL+LVD         G     + T +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVDCDEHGLPFEGSTPEPTKTII  60

Query  55   YARVSSADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHR  114
            YARV SADQK DLDRQ+ARV  WA+A+++ VD VVTEVGS  + HR+KF  LL+D SV  
Sbjct  61   YARVCSADQKPDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGSVRT  120

Query  115  IVVEHRDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCR GS+Y++AA +AQ R L+VVD  E++DDLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AENRTKRALAAA  186
            A++R ++A+  A
Sbjct  181  AKHRARKAMETA  192


>gi|328905690|gb|EGG25468.1| resolvase [Propionibacterium humerusii P08]
Length=206

 Score =  219 bits (557),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 107/192 (56%), Positives = 139/192 (73%), Gaps = 6/192 (3%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVD------EPAGDAGMRSPTAV  54
            MNL  WA   G++  TA RW+  GL+ V   RVGRL+LVD         G     + T +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVDCDEHGLPFEGSTPEPTKTII  60

Query  55   YARVSSADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHR  114
            YARV SADQK DLDRQ+ARV  WA+A+++ VD VVTEVGS  + HR+KF  LL+D SV  
Sbjct  61   YARVCSADQKPDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGSVRT  120

Query  115  IVVEHRDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCR GS+Y++AA +AQ R L+VVD  E++DDLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AENRTKRALAAA  186
            A++R ++A+  A
Sbjct  181  AKHRARKAVETA  192


>gi|288921956|ref|ZP_06416167.1| Resolvase domain protein [Frankia sp. EUN1f]
 gi|288346714|gb|EFC81032.1| Resolvase domain protein [Frankia sp. EUN1f]
Length=179

 Score =  217 bits (552),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 114/158 (73%), Positives = 127/158 (81%), Gaps = 5/158 (3%)

Query  16   TAYRWFRAGLLSVMARRVGRLILVDEPAGD--AGMRSPTAVYARVSSADQKADLDRQVAR  73
            TAYRWFR G L V ARRVGRLILV+  A +  AG+   T VYARVSSADQK+DLDRQVAR
Sbjct  5    TAYRWFREGKLPVPARRVGRLILVEPDAVERPAGL---TVVYARVSSADQKSDLDRQVAR  61

Query  74   VTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHRDRFCRLGSKYVQA  133
            VT WAT Q   VD+VVTEVGSA N HRRKFL+LLRDP V  IVVEHR +F R G++ V+A
Sbjct  62   VTGWATGQGRAVDRVVTEVGSALNGHRRKFLALLRDPDVSTIVVEHRGKFARFGAENVEA  121

Query  134  AFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYG  171
            A AA GREL+VVD AEVDDDLVRDMTEILTS+C R+YG
Sbjct  122  ALAANGRELLVVDPAEVDDDLVRDMTEILTSLCVRMYG  159


>gi|340627876|ref|YP_004746328.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
 gi|340006066|emb|CCC45238.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=295

 Score =  215 bits (547),  Expect = 3e-54, Method: Compositional matrix adjust.
 Identities = 120/172 (70%), Positives = 132/172 (77%), Gaps = 0/172 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNL  WAE NGVA   AYRW R G L V ARRVGR+ILVDEPAG  G    TAV AR+SS
Sbjct  101  MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS  160

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK DLDRQV  VTAWATA+Q+PV KVVTEVGSA    RR FL+LL DP+V RIV++ R
Sbjct  161  ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  220

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  R G + VQA  AA GRELVVVDSA+ DDD+V D+TEILTSMCARLYGK
Sbjct  221  DRLGRFGFECVQAVLAADGRELVVVDSADGDDDVVGDITEILTSMCARLYGK  272


>gi|240171118|ref|ZP_04749777.1| putative resolvase [Mycobacterium kansasii ATCC 12478]
 gi|296165344|ref|ZP_06847885.1| resolvase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899235|gb|EFG78700.1| resolvase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=193

 Score =  208 bits (530),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 112/189 (60%), Positives = 129/189 (69%), Gaps = 0/189 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAE  GV   TAYRWFR G L V A RVGRLILV   A  +G  +   VYARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKAAASVSGAAATVVVYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
             DQ++DLDRQVARVTAWAT + + V +VV EVGS  N  R K   +L DP    IVVEHR
Sbjct  61   HDQRSDLDRQVARVTAWATERDLEVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DR  R G ++++AA +AQGR +VV D  E  DDLVRDM E+LTSMCARLYG+R A NR  
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVRDMIEVLTSMCARLYGRRGARNRAM  180

Query  181  RALAAAAGE  189
            RA+ A   E
Sbjct  181  RAVTATKRE  189


>gi|158313451|ref|YP_001505959.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
 gi|158108856|gb|ABW11053.1| Resolvase domain [Frankia sp. EAN1pec]
Length=182

 Score =  202 bits (513),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 106/162 (66%), Positives = 121/162 (75%), Gaps = 1/162 (0%)

Query  10   NGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSSADQKADLDR  69
            NGV   TA +WF  G L V ARRVG LILVDEPA          VYA VSSADQ++DLDR
Sbjct  2    NGVGYSTARQWFLDGRLPVPARRVGGLILVDEPARSVP-SGTVVVYACVSSADQESDLDR  60

Query  70   QVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHRDRFCRLGSK  129
            QVAR+  W   + + V KVVTEVGSA + HRR+FL+LLRDP V  IVVEHRDRF   G++
Sbjct  61   QVARIVRWTAGENLAVGKVVTEVGSALDGHRREFLALLRDPEVTTIVVEHRDRFAWFGAE  120

Query  130  YVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYG  171
            YV+AA AA GR L+VVD +EVDDDLVRD+TEILTSMCARLYG
Sbjct  121  YVEAALAASGRRLLVVDPSEVDDDLVRDITEILTSMCARLYG  162


>gi|167969514|ref|ZP_02551791.1| IS1539 resolvase [Mycobacterium tuberculosis H37Ra]
 gi|254551957|ref|ZP_05142404.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|297635503|ref|ZP_06953283.1| resolvase [Mycobacterium tuberculosis KZN 4207]
 25 more sequence titles
 Length=195

 Score =  202 bits (513),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 120/172 (70%), Positives = 133/172 (78%), Gaps = 0/172 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNL  WAE NGVA   AYRW R G L V ARRVGR+ILVDEPAG  G    TAV AR+SS
Sbjct  1    MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK DLDRQV  VTAWATA+Q+PV KVVTEVGSA    RR FL+LL DP+V RIV++ R
Sbjct  61   ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  R G + VQA  AA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct  121  DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK  172


>gi|15610023|ref|NP_217402.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15842428|ref|NP_337465.1| IS1539 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31794062|ref|NP_856555.1| resolvase [Mycobacterium bovis AF2122/97]
 43 more sequence titles
 Length=295

 Score =  202 bits (513),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 120/172 (70%), Positives = 133/172 (78%), Gaps = 0/172 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNL  WAE NGVA   AYRW R G L V ARRVGR+ILVDEPAG  G    TAV AR+SS
Sbjct  101  MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS  160

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK DLDRQV  VTAWATA+Q+PV KVVTEVGSA    RR FL+LL DP+V RIV++ R
Sbjct  161  ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  220

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  R G + VQA  AA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct  221  DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK  272


>gi|326904500|gb|EGE51433.1| resolvase [Mycobacterium tuberculosis W-148]
 gi|328457800|gb|AEB03223.1| resolvase [Mycobacterium tuberculosis KZN 4207]
 gi|339295724|gb|AEJ47835.1| resolvase [Mycobacterium tuberculosis CCDC5079]
 gi|339299340|gb|AEJ51450.1| resolvase [Mycobacterium tuberculosis CCDC5180]
Length=223

 Score =  201 bits (512),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 120/172 (70%), Positives = 133/172 (78%), Gaps = 0/172 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNL  WAE NGVA   AYRW R G L V ARRVGR+ILVDEPAG  G    TAV AR+SS
Sbjct  29   MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS  88

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK DLDRQV  VTAWATA+Q+PV KVVTEVGSA    RR FL+LL DP+V RIV++ R
Sbjct  89   ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  148

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  R G + VQA  AA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct  149  DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK  200


>gi|258512473|ref|YP_003185907.1| Resolvase domain-containing protein [Alicyclobacillus acidocaldarius 
subsp. acidocaldarius DSM 446]
 gi|257479199|gb|ACV59518.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius DSM 446]
Length=195

 Score =  201 bits (510),  Expect = 6e-50, Method: Compositional matrix adjust.
 Identities = 102/191 (54%), Positives = 132/191 (70%), Gaps = 3/191 (1%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSV-MARRVGRLILVDEPAGDAGMRSPTAVYARVS  59
            M L+ WA +NG++  TA+RW + G + V   +     ILV EP  +    +  A+YARVS
Sbjct  1    MKLSDWARKNGISYKTAWRWVKEGRMPVPFEQTPSGTILVHEP--EPSTTNAVALYARVS  58

Query  60   SADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEH  119
            SADQKADLDRQ+AR+  +A AQ++ V K VTE+GS  N HR K + +L DP+ H IVVEH
Sbjct  59   SADQKADLDRQIARLMEFAMAQKLVVVKAVTEIGSGLNGHRPKLMKMLSDPNAHTIVVEH  118

Query  120  RDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRT  179
            RDR  R G +YV+AA AAQGR ++VV+  EV DDLV+DM E+LTS CARLYG+R+A +R 
Sbjct  119  RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMVEVLTSFCARLYGRRSARHRA  178

Query  180  KRALAAAAGED  190
            KRAL     ED
Sbjct  179  KRALEVLERED  189


>gi|339287910|gb|AEJ42020.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius Tc-4-1]
Length=208

 Score =  200 bits (509),  Expect = 7e-50, Method: Compositional matrix adjust.
 Identities = 102/191 (54%), Positives = 131/191 (69%), Gaps = 3/191 (1%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSV-MARRVGRLILVDEPAGDAGMRSPTAVYARVS  59
            M L+ WA +NG+   TA+RW + G + V   +     ILV EP  ++   +  A+YARVS
Sbjct  14   MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVHEP--ESSTENAVALYARVS  71

Query  60   SADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEH  119
            SADQKADLDRQ+AR+  +AT Q++ V K VTE+GS  N HR K + LL +P  H IVVEH
Sbjct  72   SADQKADLDRQIARLMEFATEQKLVVVKAVTEIGSGLNGHRPKLMKLLSNPDAHTIVVEH  131

Query  120  RDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRT  179
            RDR  R G +YV+AA AAQGR ++VV+  EV DDLV+DM E+LTS CARLYG+R+A +R 
Sbjct  132  RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRA  191

Query  180  KRALAAAAGED  190
            KRAL     ED
Sbjct  192  KRALEVFKRED  202


>gi|148824076|ref|YP_001288829.1| resolvase [Mycobacterium tuberculosis F11]
 gi|148722603|gb|ABR07228.1| hypothetical resolvase [Mycobacterium tuberculosis F11]
Length=295

 Score =  200 bits (508),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 119/172 (70%), Positives = 132/172 (77%), Gaps = 0/172 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNL  WAE NGVA   AYRW R G L V ARRVGR+ILVDEPAG  G    T V AR+SS
Sbjct  101  MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTVVCARLSS  160

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK DLDRQV  VTAWATA+Q+PV KVVTEVGSA    RR FL+LL DP+V RIV++ R
Sbjct  161  ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  220

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  R G + VQA  AA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct  221  DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK  272


>gi|288919761|ref|ZP_06414087.1| Resolvase domain protein [Frankia sp. EUN1f]
 gi|288348861|gb|EFC83112.1| Resolvase domain protein [Frankia sp. EUN1f]
Length=163

 Score =  199 bits (507),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 103/142 (73%), Positives = 117/142 (83%), Gaps = 1/142 (0%)

Query  30   ARRVGRLILVDEPAGDAGMRSPTAVYARVSSADQKADLDRQVARVTAWATAQQMPVDKVV  89
            AR+VG LILVDEPA    + +  AVYARVS ADQKADLDRQVARVT WA  Q + V +VV
Sbjct  3    ARKVGGLILVDEPARPVAVET-VAVYARVSCADQKADLDRQVARVTTWAAGQGLRVGRVV  61

Query  90   TEVGSAFNEHRRKFLSLLRDPSVHRIVVEHRDRFCRLGSKYVQAAFAAQGRELVVVDSAE  149
            TEVGSA N HR KFL+LLRDP+V  IVVEHRDRF R+G++YV+AA AA GR L+VVD AE
Sbjct  62   TEVGSALNGHRPKFLALLRDPAVTTIVVEHRDRFARVGAEYVEAALAANGRRLLVVDPAE  121

Query  150  VDDDLVRDMTEILTSMCARLYG  171
            VDDDLVRD+TEILTSMCARL+G
Sbjct  122  VDDDLVRDITEILTSMCARLHG  143


>gi|294994020|ref|ZP_06799711.1| resolvase [Mycobacterium tuberculosis 210]
Length=195

 Score =  199 bits (506),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 119/172 (70%), Positives = 132/172 (77%), Gaps = 0/172 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNL  WAE NGVA   AYRW R G L V ARRVGR+ILVDEPAG  G    TAV AR+SS
Sbjct  1    MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
            ADQK DLDRQV  VTAWATA+Q+PV KVVTEVGSA    RR FL+LL DP+V RIV++ R
Sbjct  61   ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  R G + VQA  AA  RELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct  121  DRLGRFGFECVQAVLAADARELVVVDSADVDDDVVGDITEILTSICARLYGK  172


>gi|15608061|ref|NP_215436.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15840344|ref|NP_335381.1| IS1535 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31792109|ref|NP_854602.1| resolvase [Mycobacterium bovis AF2122/97]
 74 more sequence titles
 Length=193

 Score =  198 bits (504),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 106/189 (57%), Positives = 126/189 (67%), Gaps = 0/189 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAE  GV   TAYRWFR G L V A RVGRLILV   A  +   +   +YARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
             D+++DLDRQVAR+TAWAT + + V +VV EVGS  N  R K   +L DP    IVVEHR
Sbjct  61   HDRRSDLDRQVARLTAWATERDLGVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DR  R G ++++AA +AQGR +VV D  E  DDLV DM E+LT MCARLYG+R A NR  
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM  180

Query  181  RALAAAAGE  189
            RA+  A  E
Sbjct  181  RAVTEAKRE  189


>gi|340625932|ref|YP_004744384.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
 gi|340004122|emb|CCC43259.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=193

 Score =  198 bits (503),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 106/189 (57%), Positives = 126/189 (67%), Gaps = 0/189 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAE  GV   TAYRWFR G L V A RVGRLILV   A  +   +   +YARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
             D+++DLDRQVAR+TAWAT + + V +VV EVGS  N  R K   +L DP    IVVEHR
Sbjct  61   HDRRSDLDRQVARLTAWATERDLGVGQVVREVGSGLNGKRPKLRRILSDPDARVIVVEHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DR  R G ++++AA +AQGR +VV D  E  DDLV DM E+LT MCARLYG+R A NR  
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM  180

Query  181  RALAAAAGE  189
            RA+  A  E
Sbjct  181  RAVTEAKRE  189


>gi|339290995|gb|AEJ45105.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius Tc-4-1]
Length=195

 Score =  197 bits (501),  Expect = 7e-49, Method: Compositional matrix adjust.
 Identities = 101/191 (53%), Positives = 131/191 (69%), Gaps = 3/191 (1%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSV-MARRVGRLILVDEPAGDAGMRSPTAVYARVS  59
            M L+ WA +NG+   TA+RW + G + V   +     ILV EP  ++   +  A+YARVS
Sbjct  1    MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVREP--ESSTANAVALYARVS  58

Query  60   SADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEH  119
            SADQK DLDRQ+AR+  +AT Q++ V K VTE+GS  N HR K + LL +P+ H IVVEH
Sbjct  59   SADQKDDLDRQIARLMEFATEQKLVVFKAVTEIGSGLNGHRPKLMKLLSNPNAHTIVVEH  118

Query  120  RDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRT  179
            RDR  R G +YV+AA AAQGR ++VV+  EV DDLV+DM E+LTS CARLYG+R+A +R 
Sbjct  119  RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRA  178

Query  180  KRALAAAAGED  190
            KRAL     ED
Sbjct  179  KRALEVFKRED  189


>gi|289752977|ref|ZP_06512355.1| resolvase [Mycobacterium tuberculosis EAS054]
 gi|289693564|gb|EFD60993.1| resolvase [Mycobacterium tuberculosis EAS054]
Length=193

 Score =  197 bits (500),  Expect = 9e-49, Method: Compositional matrix adjust.
 Identities = 105/189 (56%), Positives = 126/189 (67%), Gaps = 0/189 (0%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60
            MNLA WAE  GV   TAYRWFR G L V A RVGRLILV   A  +   +   +YARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS  60

Query  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120
             D+++DLDRQVAR+TAWAT + + V +VV EVGS  N  R K   +L DP    IVV+HR
Sbjct  61   HDRRSDLDRQVARLTAWATERDLGVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVKHR  120

Query  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180
            DR  R G ++++AA +AQGR +VV D  E  DDLV DM E+LT MCARLYG+R A NR  
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM  180

Query  181  RALAAAAGE  189
            RA+  A  E
Sbjct  181  RAVTEAKRE  189


>gi|339290736|gb|AEJ44846.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius Tc-4-1]
Length=195

 Score =  196 bits (499),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 101/191 (53%), Positives = 130/191 (69%), Gaps = 3/191 (1%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSV-MARRVGRLILVDEPAGDAGMRSPTAVYARVS  59
            M L+ WA +NG+   TA+RW + G + V   +     ILV EP  ++   +  A+YARVS
Sbjct  1    MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVREP--ESSTANAVALYARVS  58

Query  60   SADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEH  119
            SADQK DLDRQ+AR+  +AT Q++ V K VTE+GS  N HR K + LL +P  H IVVEH
Sbjct  59   SADQKDDLDRQIARLMEFATEQKLVVFKAVTEIGSGLNGHRPKLMKLLSNPDAHTIVVEH  118

Query  120  RDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRT  179
            RDR  R G +YV+AA AAQGR ++VV+  EV DDLV+DM E+LTS CARLYG+R+A +R 
Sbjct  119  RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRA  178

Query  180  KRALAAAAGED  190
            KRAL     ED
Sbjct  179  KRALEVFKRED  189


>gi|295696699|ref|YP_003589937.1| Resolvase domain-containing protein [Bacillus tusciae DSM 2912]
 gi|295412301|gb|ADG06793.1| Resolvase domain protein [Bacillus tusciae DSM 2912]
Length=192

 Score =  194 bits (494),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 104/194 (54%), Positives = 131/194 (68%), Gaps = 3/194 (1%)

Query  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRV-GRLILVDEPAGDAGMRSPTAVYARVS  59
            M L+ WA + G++  TA+RW++ G L V AR+     ILVD P      R  T VYARVS
Sbjct  1    MKLSDWARQQGISYMTAWRWWKDGKLPVPARQTESGTILVDVPPSRKDGR--TVVYARVS  58

Query  60   SADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEH  119
            S DQ++DLDRQV+R+T WAT + + VD+VVTEVGS  N  R K   +L D  V  I+VEH
Sbjct  59   SHDQRSDLDRQVSRITQWATERDLVVDEVVTEVGSGMNGKRPKLRRILADARVTTIIVEH  118

Query  120  RDRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRT  179
            RDR  R G +Y+++A AAQGR +VVVDS E  DDLVRDM E+LTS CARLYG+R A NR 
Sbjct  119  RDRLARFGVEYLESALAAQGRHIVVVDSGETRDDLVRDMIEVLTSFCARLYGRRGARNRA  178

Query  180  KRALAAAAGEDHEA  193
             RA+ AA  +  E+
Sbjct  179  LRAVTAAKKDGKES  192


>gi|158317728|ref|YP_001510236.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
 gi|158113133|gb|ABW15330.1| Resolvase domain [Frankia sp. EAN1pec]
Length=162

 Score =  194 bits (492),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 113/160 (71%), Positives = 128/160 (80%), Gaps = 4/160 (2%)

Query  30   ARRVGRLILVDEPAGDA-GMRSPTAVYARVSSADQKADLDRQVARVTAWATAQQMPVDKV  88
            ARRVG LILV+EPA  A GM   TAVYARVSSADQ++DLDRQVARV  WA  + +PV KV
Sbjct  3    ARRVGGLILVEEPARSATGM---TAVYARVSSADQESDLDRQVARVVTWAAGRNLPVGKV  59

Query  89   VTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHRDRFCRLGSKYVQAAFAAQGRELVVVDSA  148
            VTEVGSA    RR+FL+LL DP V  IVVEHRDRF R G++YV+AA AA GR L+VVD A
Sbjct  60   VTEVGSALGGDRREFLALLGDPRVSTIVVEHRDRFARFGAEYVEAALAACGRRLLVVDPA  119

Query  149  EVDDDLVRDMTEILTSMCARLYGKRAAENRTKRALAAAAG  188
            EVDDDLVRD+TEILTSMCARLYG+R A NR +RA+ AA G
Sbjct  120  EVDDDLVRDVTEILTSMCARLYGRRGAGNRARRAVEAATG  159



Lambda     K      H
   0.321    0.131    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 198992683544


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40