BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2987c
Length=198
Score E
Sequences producing significant alignments: (Bits) Value
gi|306808963|ref|ZP_07445631.1| 3-isopropylmalate dehydratase sm... 400 4e-110
gi|15610124|ref|NP_217503.1| isopropylmalate isomerase small sub... 400 6e-110
gi|339299435|gb|AEJ51545.1| 3-isopropylmalate dehydratase small ... 375 2e-102
gi|293651865|pdb|3H5H|A Chain A, Leud_1-186 Small Subunit Of Iso... 370 6e-101
gi|254819111|ref|ZP_05224112.1| isopropylmalate isomerase small ... 366 1e-99
gi|240168952|ref|ZP_04747611.1| isopropylmalate isomerase small ... 365 1e-99
gi|118465097|ref|YP_883004.1| isopropylmalate isomerase small su... 363 8e-99
gi|254776260|ref|ZP_05217776.1| isopropylmalate isomerase small ... 363 1e-98
gi|41409123|ref|NP_961959.1| isopropylmalate isomerase small sub... 362 2e-98
gi|296171285|ref|ZP_06852689.1| 3-isopropylmalate dehydratase sm... 362 2e-98
gi|85540689|sp|Q73VI8.2|LEUD_MYCPA RecName: Full=3-isopropylmala... 362 2e-98
gi|118617555|ref|YP_905887.1| isopropylmalate isomerase small su... 360 5e-98
gi|342858186|ref|ZP_08714841.1| isopropylmalate isomerase small ... 360 7e-98
gi|118470522|ref|YP_886728.1| isopropylmalate isomerase small su... 354 4e-96
gi|15827895|ref|NP_302158.1| isopropylmalate isomerase small sub... 349 1e-94
gi|315445135|ref|YP_004078014.1| 3-isopropylmalate dehydratase, ... 340 6e-92
gi|333991330|ref|YP_004523944.1| 3-isopropylmalate dehydratase (... 340 7e-92
gi|108798890|ref|YP_639087.1| isopropylmalate isomerase small su... 339 1e-91
gi|145224805|ref|YP_001135483.1| isopropylmalate isomerase small... 339 1e-91
gi|120403128|ref|YP_952957.1| isopropylmalate isomerase small su... 338 2e-91
gi|126434490|ref|YP_001070181.1| isopropylmalate isomerase small... 338 2e-91
gi|293651867|pdb|3H5J|A Chain A, Leud_1-168 Small Subunit Of Iso... 336 1e-90
gi|169630374|ref|YP_001704023.1| isopropylmalate isomerase small... 330 5e-89
gi|229493386|ref|ZP_04387175.1| 3-isopropylmalate dehydratase, s... 319 2e-85
gi|54026182|ref|YP_120424.1| isopropylmalate isomerase small sub... 318 2e-85
gi|226305896|ref|YP_002765856.1| 3-isopropylmalate dehydratase s... 317 5e-85
gi|226365960|ref|YP_002783743.1| isopropylmalate isomerase small... 315 3e-84
gi|312140482|ref|YP_004007818.1| 3-isopropylmalate dehydratase s... 315 3e-84
gi|111023459|ref|YP_706431.1| isopropylmalate isomerase small su... 313 8e-84
gi|293651863|pdb|3H5E|A Chain A, Leud_1-156 Small Subunit Of Iso... 311 4e-83
gi|333920848|ref|YP_004494429.1| 3-isopropylmalate dehydratase s... 308 2e-82
gi|260579000|ref|ZP_05846902.1| 3-isopropylmalate dehydratase, s... 305 2e-81
gi|161986621|ref|YP_251002.2| isopropylmalate isomerase small su... 304 5e-81
gi|262203104|ref|YP_003274312.1| 3-isopropylmalate dehydratase s... 302 2e-80
gi|326381557|ref|ZP_08203251.1| isopropylmalate isomerase small ... 296 1e-78
gi|229820066|ref|YP_002881592.1| isopropylmalate isomerase small... 295 2e-78
gi|296130154|ref|YP_003637404.1| 3-isopropylmalate dehydratase, ... 295 2e-78
gi|116671064|ref|YP_831997.1| isopropylmalate isomerase small su... 295 4e-78
gi|309813282|ref|ZP_07706998.1| 3-isopropylmalate dehydratase, s... 293 7e-78
gi|343926839|ref|ZP_08766332.1| 3-isopropylmalate dehydratase sm... 293 8e-78
gi|257054960|ref|YP_003132792.1| 3-isopropylmalate dehydratase, ... 292 2e-77
gi|332670961|ref|YP_004453969.1| 3-isopropylmalate dehydratase, ... 291 3e-77
gi|269794434|ref|YP_003313889.1| 3-isopropylmalate dehydratase s... 291 4e-77
gi|336320268|ref|YP_004600236.1| 3-isopropylmalate dehydratase, ... 291 4e-77
gi|172040455|ref|YP_001800169.1| hypothetical protein cur_0775 [... 290 6e-77
gi|334337605|ref|YP_004542757.1| 3-isopropylmalate dehydratase s... 290 7e-77
gi|119963900|ref|YP_948211.1| isopropylmalate isomerase small su... 290 7e-77
gi|302524988|ref|ZP_07277330.1| 3-isopropylmalate dehydratase, s... 290 8e-77
gi|145295457|ref|YP_001138278.1| isopropylmalate isomerase small... 289 1e-76
gi|300783646|ref|YP_003763937.1| 3-isopropylmalate/(R)-2-methylm... 288 2e-76
>gi|306808963|ref|ZP_07445631.1| 3-isopropylmalate dehydratase small subunit leuD [Mycobacterium
tuberculosis SUMu007]
gi|306969061|ref|ZP_07481722.1| 3-isopropylmalate dehydratase small subunit leuD [Mycobacterium
tuberculosis SUMu009]
gi|308344678|gb|EFP33529.1| 3-isopropylmalate dehydratase small subunit leuD [Mycobacterium
tuberculosis SUMu007]
gi|308353354|gb|EFP42205.1| 3-isopropylmalate dehydratase small subunit leuD [Mycobacterium
tuberculosis SUMu009]
Length=208
Score = 400 bits (1029), Expect = 4e-110, Method: Compositional matrix adjust.
Identities = 198/198 (100%), Positives = 198/198 (100%), Gaps = 0/198 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD
Sbjct 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI
Sbjct 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
Query 181 EAFEGACAYWKPRTLPAP 198
EAFEGACAYWKPRTLPAP
Sbjct 181 EAFEGACAYWKPRTLPAP 198
>gi|15610124|ref|NP_217503.1| isopropylmalate isomerase small subunit [Mycobacterium tuberculosis
H37Rv]
gi|15842543|ref|NP_337580.1| isopropylmalate isomerase small subunit [Mycobacterium tuberculosis
CDC1551]
gi|31794163|ref|NP_856656.1| isopropylmalate isomerase small subunit [Mycobacterium bovis
AF2122/97]
80 more sequence titles
Length=198
Score = 400 bits (1028), Expect = 6e-110, Method: Compositional matrix adjust.
Identities = 198/198 (100%), Positives = 198/198 (100%), Gaps = 0/198 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD
Sbjct 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI
Sbjct 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
Query 181 EAFEGACAYWKPRTLPAP 198
EAFEGACAYWKPRTLPAP
Sbjct 181 EAFEGACAYWKPRTLPAP 198
>gi|339299435|gb|AEJ51545.1| 3-isopropylmalate dehydratase small subunit leuD [Mycobacterium
tuberculosis CCDC5180]
Length=187
Score = 375 bits (964), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 186/187 (99%), Positives = 187/187 (100%), Gaps = 0/187 (0%)
Query 12 VPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDRGSVLVAGPDF 71
+PLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDRGSVLVAGPDF
Sbjct 1 MPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDRGSVLVAGPDF 60
Query 72 GTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSP 131
GTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSP
Sbjct 61 GTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSP 120
Query 132 GLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEIEAFEGACAYWK 191
GLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEIEAFEGACAYWK
Sbjct 121 GLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEIEAFEGACAYWK 180
Query 192 PRTLPAP 198
PRTLPAP
Sbjct 181 PRTLPAP 187
>gi|293651865|pdb|3H5H|A Chain A, Leud_1-186 Small Subunit Of Isopropylmalate Isomerase
(Rv2987c) From Mycobacterium Tuberculosis
gi|293651866|pdb|3H5H|B Chain B, Leud_1-186 Small Subunit Of Isopropylmalate Isomerase
(Rv2987c) From Mycobacterium Tuberculosis
Length=189
Score = 370 bits (950), Expect = 6e-101, Method: Compositional matrix adjust.
Identities = 185/185 (100%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
Query 2 EAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDR 61
EAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDR
Sbjct 5 EAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDR 64
Query 62 GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVE 121
GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVE
Sbjct 65 GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVE 124
Query 122 LLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEIE 181
LLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEIE
Sbjct 125 LLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEIE 184
Query 182 AFEGA 186
AFEGA
Sbjct 185 AFEGA 189
>gi|254819111|ref|ZP_05224112.1| isopropylmalate isomerase small subunit [Mycobacterium intracellulare
ATCC 13950]
Length=198
Score = 366 bits (939), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/195 (93%), Positives = 186/195 (96%), Gaps = 0/195 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAFHTH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WRSDP+FVLNLSPFD
Sbjct 1 MEAFHTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFASWRSDPSFVLNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEV+QD V
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVSQDGV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQSPGLEITANLQDR ITA T VLPFKIDDH+AWRLLEGLDDIALTLRKLDEI
Sbjct 121 ELLWKLIEQSPGLEITANLQDRNITAGTTVLPFKIDDHTAWRLLEGLDDIALTLRKLDEI 180
Query 181 EAFEGACAYWKPRTL 195
E+FE A WKPRTL
Sbjct 181 ESFEAAYPDWKPRTL 195
>gi|240168952|ref|ZP_04747611.1| isopropylmalate isomerase small subunit [Mycobacterium kansasii
ATCC 12478]
Length=198
Score = 365 bits (938), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/197 (92%), Positives = 187/197 (95%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAFHTH+G+GVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFA WRSDP+FVLNLSPFD
Sbjct 1 MEAFHTHTGVGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFASWRSDPSFVLNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMD+GFRVVISSRFGDIFRGNAGKAGLLAAEV QD V
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDFGFRVVISSRFGDIFRGNAGKAGLLAAEVDQDGV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQSPGLEIT NLQDR ITA TVVLPFKIDDH+AWRLLEGLDDIALTLRKLDEI
Sbjct 121 ELLWKLIEQSPGLEITVNLQDRNITAGTVVLPFKIDDHTAWRLLEGLDDIALTLRKLDEI 180
Query 181 EAFEGACAYWKPRTLPA 197
E++E A WKPRTLPA
Sbjct 181 ESYEQAYPAWKPRTLPA 197
>gi|118465097|ref|YP_883004.1| isopropylmalate isomerase small subunit [Mycobacterium avium
104]
gi|166989826|sp|A0QJB6.1|LEUD_MYCA1 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|118166384|gb|ABK67281.1| 3-isopropylmalate dehydratase, small subunit [Mycobacterium avium
104]
Length=198
Score = 363 bits (932), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 178/196 (91%), Positives = 185/196 (95%), Gaps = 0/196 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAFHTH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WRSDP+FVLNLSPFD
Sbjct 1 MEAFHTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFASWRSDPSFVLNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEV+QD V
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVSQDGV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQSPGLEITANLQDR ITA T VLPFKIDDH+AWRLLEGLDDIALTLRKLD I
Sbjct 121 ELLWKLIEQSPGLEITANLQDRNITAGTTVLPFKIDDHTAWRLLEGLDDIALTLRKLDRI 180
Query 181 EAFEGACAYWKPRTLP 196
E++E A WKPRT P
Sbjct 181 ESYEAAYPDWKPRTSP 196
>gi|254776260|ref|ZP_05217776.1| isopropylmalate isomerase small subunit [Mycobacterium avium
subsp. avium ATCC 25291]
Length=198
Score = 363 bits (931), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 178/196 (91%), Positives = 185/196 (95%), Gaps = 0/196 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAFHTH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WRSDP+FVLNLSPFD
Sbjct 1 MEAFHTHAGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFASWRSDPSFVLNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEV+QD V
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVSQDGV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQSPGLEITANLQDR ITA T VLPFKIDDH+AWRLLEGLDDIALTLRKLD I
Sbjct 121 ELLWKLIEQSPGLEITANLQDRNITAGTTVLPFKIDDHTAWRLLEGLDDIALTLRKLDRI 180
Query 181 EAFEGACAYWKPRTLP 196
E++E A WKPRT P
Sbjct 181 ESYEAAYPDWKPRTSP 196
>gi|41409123|ref|NP_961959.1| isopropylmalate isomerase small subunit [Mycobacterium avium
subsp. paratuberculosis K-10]
gi|41397943|gb|AAS05573.1| LeuD [Mycobacterium avium subsp. paratuberculosis K-10]
Length=200
Score = 362 bits (929), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/196 (91%), Positives = 184/196 (94%), Gaps = 0/196 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAFHTH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WRSDP+FVLNLSPFD
Sbjct 3 MEAFHTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFASWRSDPSFVLNLSPFD 62
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEV+QD V
Sbjct 63 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVSQDGV 122
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQSPGLEITANLQDR ITA T VLPFKIDDH+AWRLLEGLDDIALTLRKLD I
Sbjct 123 ELLWKLIEQSPGLEITANLQDRNITAGTTVLPFKIDDHTAWRLLEGLDDIALTLRKLDRI 182
Query 181 EAFEGACAYWKPRTLP 196
E++E WKPRT P
Sbjct 183 ESYEATYPDWKPRTSP 198
>gi|296171285|ref|ZP_06852689.1| 3-isopropylmalate dehydratase small subunit [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894253|gb|EFG74010.1| 3-isopropylmalate dehydratase small subunit [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=198
Score = 362 bits (928), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/197 (89%), Positives = 185/197 (94%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAFHTH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WRSDP+F+LNLSPFD
Sbjct 1 MEAFHTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFASWRSDPSFILNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEV+QD V
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVSQDGV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQSPGLEIT NLQDR ITA T VLPFKIDDH+AWRLLEGLDDIALTLRKLD+I
Sbjct 121 ELLWKLIEQSPGLEITVNLQDRNITAGTAVLPFKIDDHTAWRLLEGLDDIALTLRKLDKI 180
Query 181 EAFEGACAYWKPRTLPA 197
E++E WKPRT+P
Sbjct 181 ESYEARYPQWKPRTVPT 197
>gi|85540689|sp|Q73VI8.2|LEUD_MYCPA RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|336459117|gb|EGO38065.1| 3-isopropylmalate dehydratase, small subunit [Mycobacterium avium
subsp. paratuberculosis S397]
Length=198
Score = 362 bits (928), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/196 (91%), Positives = 184/196 (94%), Gaps = 0/196 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAFHTH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WRSDP+FVLNLSPFD
Sbjct 1 MEAFHTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFASWRSDPSFVLNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEV+QD V
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVSQDGV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQSPGLEITANLQDR ITA T VLPFKIDDH+AWRLLEGLDDIALTLRKLD I
Sbjct 121 ELLWKLIEQSPGLEITANLQDRNITAGTTVLPFKIDDHTAWRLLEGLDDIALTLRKLDRI 180
Query 181 EAFEGACAYWKPRTLP 196
E++E WKPRT P
Sbjct 181 ESYEATYPDWKPRTSP 196
>gi|118617555|ref|YP_905887.1| isopropylmalate isomerase small subunit [Mycobacterium ulcerans
Agy99]
gi|183981740|ref|YP_001850031.1| 3-isopropylmalate dehydratase (small subunit) LeuD [Mycobacterium
marinum M]
gi|166990551|sp|A0PPZ7.1|LEUD_MYCUA RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|226736068|sp|B2HII2.1|LEUD_MYCMM RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|118569665|gb|ABL04416.1| 3-isopropylmalate dehydratase (small subunit) LeuD [Mycobacterium
ulcerans Agy99]
gi|183175066|gb|ACC40176.1| 3-isopropylmalate dehydratase (small subunit) LeuD [Mycobacterium
marinum M]
Length=198
Score = 360 bits (925), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 178/197 (91%), Positives = 184/197 (94%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH+GIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFA WRSDP+FVLNLSPFD
Sbjct 1 MEAFDTHTGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFASWRSDPSFVLNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEV QD V
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVDQDGV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQSPGLEIT NLQDR + A TVVLPF+IDDH+AWRLLEGLDDIALTLRKLDEI
Sbjct 121 ELLWKLIEQSPGLEITVNLQDRNVIAGTVVLPFRIDDHTAWRLLEGLDDIALTLRKLDEI 180
Query 181 EAFEGACAYWKPRTLPA 197
EA+E A WKPRTLP
Sbjct 181 EAYEAAYPAWKPRTLPT 197
>gi|342858186|ref|ZP_08714841.1| isopropylmalate isomerase small subunit [Mycobacterium colombiense
CECT 3035]
gi|342133890|gb|EGT87070.1| isopropylmalate isomerase small subunit [Mycobacterium colombiense
CECT 3035]
Length=198
Score = 360 bits (923), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 178/197 (91%), Positives = 184/197 (94%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WRSDP+FVLNLSPFD
Sbjct 1 MEAFRTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFASWRSDPSFVLNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEV+QD V
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVSQDGV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQSPGLEIT NLQDR ITA T VLPFKIDDH+AWRLLEGLDDIALTLRKLD+I
Sbjct 121 ELLWKLIEQSPGLEITVNLQDRNITAGTTVLPFKIDDHTAWRLLEGLDDIALTLRKLDKI 180
Query 181 EAFEGACAYWKPRTLPA 197
EAFE WKPRTLP
Sbjct 181 EAFEIEYPDWKPRTLPT 197
>gi|118470522|ref|YP_886728.1| isopropylmalate isomerase small subunit [Mycobacterium smegmatis
str. MC2 155]
gi|118171809|gb|ABK72705.1| 3-isopropylmalate dehydratase, small subunit [Mycobacterium smegmatis
str. MC2 155]
Length=197
Score = 354 bits (909), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 170/197 (87%), Positives = 185/197 (94%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR+DP+F+LNLSPFD
Sbjct 1 MEAFTTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRNDPSFILNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
+GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRF DIFRGNAGKAGLLAAEVAQDDV
Sbjct 61 KGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFADIFRGNAGKAGLLAAEVAQDDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWK+IEQ+PGLEIT NLQDR +TA TVV+PF+IDD++ WRLLEGLDDI LTLRKLD+I
Sbjct 121 ELLWKVIEQNPGLEITVNLQDRTVTAGTVVVPFRIDDYTRWRLLEGLDDIGLTLRKLDQI 180
Query 181 EAFEGACAYWKPRTLPA 197
EA+E A WKPRTLPA
Sbjct 181 EAYEAARPAWKPRTLPA 197
>gi|15827895|ref|NP_302158.1| isopropylmalate isomerase small subunit [Mycobacterium leprae
TN]
gi|221230372|ref|YP_002503788.1| isopropylmalate isomerase small subunit [Mycobacterium leprae
Br4923]
gi|3122360|sp|O33124.1|LEUD_MYCLE RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|254809076|sp|B8ZS11.1|LEUD_MYCLB RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|2414559|emb|CAB16448.1| 3-isopropylmalate dehydratase [Mycobacterium leprae]
gi|13093448|emb|CAC30637.1| 3-isopropylmalate dehydratase small subunit [Mycobacterium leprae]
gi|219933479|emb|CAR71779.1| 3-isopropylmalate dehydratase small subunit [Mycobacterium leprae
Br4923]
Length=198
Score = 349 bits (896), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 172/197 (88%), Positives = 178/197 (91%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
M+AF H+GIGVPLRRSNVDTDQIIPAVFLKRVTR GFEDGLFA WR DP+FVLNLSPFD
Sbjct 1 MQAFRVHTGIGVPLRRSNVDTDQIIPAVFLKRVTRNGFEDGLFATWRVDPSFVLNLSPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLV GPDFG GSSREHAVWALMDYGFRVVISSRFGDIF GNAGKAGLLAA+VAQDDV
Sbjct 61 RGSVLVVGPDFGIGSSREHAVWALMDYGFRVVISSRFGDIFHGNAGKAGLLAAQVAQDDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
E LWKLIEQ PGLEIT NLQDR I AATVVLPFKIDD++AWRLLEGLDDIAL LRKLDEI
Sbjct 121 EFLWKLIEQKPGLEITVNLQDRNINAATVVLPFKIDDYTAWRLLEGLDDIALNLRKLDEI 180
Query 181 EAFEGACAYWKPRTLPA 197
EAFE A WKPRTLP
Sbjct 181 EAFESARPAWKPRTLPT 197
>gi|315445135|ref|YP_004078014.1| 3-isopropylmalate dehydratase, small subunit [Mycobacterium sp.
Spyr1]
gi|315263438|gb|ADU00180.1| 3-isopropylmalate dehydratase, small subunit [Mycobacterium sp.
Spyr1]
Length=197
Score = 340 bits (873), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 166/197 (85%), Positives = 178/197 (91%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR+DP+FVLN PFD
Sbjct 1 MEAFRTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRNDPSFVLNQPPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
+GSVLVAGPDFGTGSSREHAVWALMD+GFRVVISSRF DIFRGNAGKAGLLAAEV QDDV
Sbjct 61 QGSVLVAGPDFGTGSSREHAVWALMDFGFRVVISSRFADIFRGNAGKAGLLAAEVTQDDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWK+IEQ PG EIT NLQDR +TA TV++PF IDD++AWRLLEGLDDI LTLRKLDEI
Sbjct 121 ELLWKVIEQHPGTEITVNLQDRSVTAGTVMVPFTIDDYTAWRLLEGLDDIGLTLRKLDEI 180
Query 181 EAFEGACAYWKPRTLPA 197
E FE WKPRTLPA
Sbjct 181 EDFETHRPSWKPRTLPA 197
>gi|333991330|ref|YP_004523944.1| 3-isopropylmalate dehydratase (small subunit) LeuD [Mycobacterium
sp. JDM601]
gi|333487298|gb|AEF36690.1| 3-isopropylmalate dehydratase (small subunit) LeuD [Mycobacterium
sp. JDM601]
Length=198
Score = 340 bits (872), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 165/197 (84%), Positives = 178/197 (91%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAFHTH+GIGVPLRRSNVDTDQIIPAV+LKR+TRTGFEDGLFA WR+DP+F+LNL PFD
Sbjct 1 MEAFHTHTGIGVPLRRSNVDTDQIIPAVYLKRITRTGFEDGLFATWRTDPSFILNLKPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
+GSVLVAGPDFGTGSSREHAVWAL+DYGFRVVISSRF DIFRGNAGKAGLLAA+VAQDDV
Sbjct 61 QGSVLVAGPDFGTGSSREHAVWALLDYGFRVVISSRFADIFRGNAGKAGLLAAQVAQDDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIE SPGLEIT NLQDR ITA T V+ F IDD++AWRL EGLDDI LTLRKLDEI
Sbjct 121 ELLWKLIEASPGLEITVNLQDRNITAGTAVVAFTIDDYTAWRLSEGLDDIGLTLRKLDEI 180
Query 181 EAFEGACAYWKPRTLPA 197
FE WKPRT+PA
Sbjct 181 ATFEADRPGWKPRTVPA 197
>gi|108798890|ref|YP_639087.1| isopropylmalate isomerase small subunit [Mycobacterium sp. MCS]
gi|119868005|ref|YP_937957.1| isopropylmalate isomerase small subunit [Mycobacterium sp. KMS]
gi|123369438|sp|Q1BAQ3.1|LEUD_MYCSS RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|166989829|sp|A1UEA9.1|LEUD_MYCSK RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|108769309|gb|ABG08031.1| 3-isopropylmalate dehydratase, small subunit [Mycobacterium sp.
MCS]
gi|119694094|gb|ABL91167.1| 3-isopropylmalate dehydratase, small subunit [Mycobacterium sp.
KMS]
Length=197
Score = 339 bits (870), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/196 (85%), Positives = 177/196 (91%), Gaps = 0/196 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR+DP+FVLNL PFD
Sbjct 1 MEAFRTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRNDPSFVLNLPPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRF DIFRGNAGKAGLLAAEV Q+DV
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFADIFRGNAGKAGLLAAEVNQNDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQ+PGLEIT NLQDR I A TV++PF IDD++AWRLLEGLDDI LTLRK EI
Sbjct 121 ELLWKLIEQNPGLEITVNLQDRNIIAGTVMVPFTIDDYTAWRLLEGLDDIGLTLRKQSEI 180
Query 181 EAFEGACAYWKPRTLP 196
E +E WKPRTLP
Sbjct 181 EDYERRRPSWKPRTLP 196
>gi|145224805|ref|YP_001135483.1| isopropylmalate isomerase small subunit [Mycobacterium gilvum
PYR-GCK]
gi|189046512|sp|A4TE22.1|LEUD_MYCGI RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|145217291|gb|ABP46695.1| 3-isopropylmalate dehydratase, small subunit [Mycobacterium gilvum
PYR-GCK]
Length=197
Score = 339 bits (870), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/197 (84%), Positives = 177/197 (90%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR+DP+FVLN PFD
Sbjct 1 MEAFRTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRNDPSFVLNQPPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
+GSVLV GPDFGTGSSREHAVWALMD+GFRVVISSRF DIFRGNAGKAGLLAAEV QDDV
Sbjct 61 QGSVLVTGPDFGTGSSREHAVWALMDFGFRVVISSRFADIFRGNAGKAGLLAAEVTQDDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWK+IEQ PG EIT NLQDR +TA TV++PF IDD++AWRLLEGLDDI LTLRKLDEI
Sbjct 121 ELLWKVIEQHPGTEITVNLQDRSVTAGTVMVPFTIDDYTAWRLLEGLDDIGLTLRKLDEI 180
Query 181 EAFEGACAYWKPRTLPA 197
E FE WKPRTLPA
Sbjct 181 EDFETHRPSWKPRTLPA 197
>gi|120403128|ref|YP_952957.1| isopropylmalate isomerase small subunit [Mycobacterium vanbaalenii
PYR-1]
gi|166990552|sp|A1T701.1|LEUD_MYCVP RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|119955946|gb|ABM12951.1| 3-isopropylmalate dehydratase, small subunit [Mycobacterium vanbaalenii
PYR-1]
Length=197
Score = 338 bits (868), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/197 (84%), Positives = 179/197 (91%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR+DP+FVLNL+PFD
Sbjct 1 MEAFRTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRNDPSFVLNLAPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
+GSVLVAGPDFGTGSSREHAVWALMD+GFRVVISSRF DIFRGNAGKAGLLAAEV+QDDV
Sbjct 61 KGSVLVAGPDFGTGSSREHAVWALMDFGFRVVISSRFADIFRGNAGKAGLLAAEVSQDDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQ PG EIT NLQDR ITA T+++ F IDD++AWRLLEGLDDI LTLRKLDEI
Sbjct 121 ELLWKLIEQHPGTEITVNLQDRTITAGTMMVLFNIDDYTAWRLLEGLDDIGLTLRKLDEI 180
Query 181 EAFEGACAYWKPRTLPA 197
E +E WKP TLPA
Sbjct 181 EDYERHRPEWKPHTLPA 197
>gi|126434490|ref|YP_001070181.1| isopropylmalate isomerase small subunit [Mycobacterium sp. JLS]
gi|166989828|sp|A3PXR3.1|LEUD_MYCSJ RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|126234290|gb|ABN97690.1| 3-isopropylmalate dehydratase, small subunit [Mycobacterium sp.
JLS]
Length=197
Score = 338 bits (868), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/196 (85%), Positives = 177/196 (91%), Gaps = 0/196 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR+DP+FVLNL PFD
Sbjct 1 MEAFRTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRNDPSFVLNLPPFD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRF DIFRGNAGKAGLLAAEV Q+DV
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFADIFRGNAGKAGLLAAEVNQNDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
EL+WKLIEQ+PGLEIT NLQDR I A TV++PF IDD++AWRLLEGLDDI LTLRK EI
Sbjct 121 ELIWKLIEQNPGLEITVNLQDRNIIAGTVMVPFTIDDYTAWRLLEGLDDIGLTLRKQSEI 180
Query 181 EAFEGACAYWKPRTLP 196
E +E WKPRTLP
Sbjct 181 EDYERRRPSWKPRTLP 196
>gi|293651867|pdb|3H5J|A Chain A, Leud_1-168 Small Subunit Of Isopropylmalate Isomerase
(Rv2987c) From Mycobacterium Tuberculosis
gi|293651868|pdb|3H5J|B Chain B, Leud_1-168 Small Subunit Of Isopropylmalate Isomerase
(Rv2987c) From Mycobacterium Tuberculosis
Length=171
Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/167 (100%), Positives = 167/167 (100%), Gaps = 0/167 (0%)
Query 2 EAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDR 61
EAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDR
Sbjct 5 EAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDR 64
Query 62 GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVE 121
GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVE
Sbjct 65 GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVE 124
Query 122 LLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLD 168
LLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLD
Sbjct 125 LLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLD 171
>gi|169630374|ref|YP_001704023.1| isopropylmalate isomerase small subunit [Mycobacterium abscessus
ATCC 19977]
gi|226736067|sp|B1MDQ0.1|LEUD_MYCA9 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|169242341|emb|CAM63369.1| 3-isopropylmalate dehydratase, small subunit (LeuD) [Mycobacterium
abscessus]
Length=199
Score = 330 bits (847), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 157/195 (81%), Positives = 178/195 (92%), Gaps = 0/195 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFAGWR+DP+F+LNL PF+
Sbjct 1 MEAFDTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAGWRTDPSFILNLEPFN 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RG+VLVAGP+FGTGSSREHAVWALMDYGFRVV+SSRFGDIFRGNAGKAGL+A V Q D+
Sbjct 61 RGTVLVAGPEFGTGSSREHAVWALMDYGFRVVLSSRFGDIFRGNAGKAGLVAGLVGQSDI 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKLIEQ+PGLE+T NL+DR +TA T V+PF+IDD++ WRLLEGLDDI LTLRK+DEI
Sbjct 121 ELLWKLIEQNPGLELTVNLEDRTVTAGTAVVPFEIDDYTRWRLLEGLDDIGLTLRKVDEI 180
Query 181 EAFEGACAYWKPRTL 195
AFE A +KPRTL
Sbjct 181 AAFEAARPEFKPRTL 195
>gi|229493386|ref|ZP_04387175.1| 3-isopropylmalate dehydratase, small subunit [Rhodococcus erythropolis
SK121]
gi|229319702|gb|EEN85534.1| 3-isopropylmalate dehydratase, small subunit [Rhodococcus erythropolis
SK121]
Length=202
Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/197 (76%), Positives = 174/197 (89%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME+F TH GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFAGWR+DP F+LNL+P+D
Sbjct 1 MESFTTHKGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAGWRTDPNFILNLAPYD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
+GSVLVAGPDFGTGSSREHAVWAL D+GFRVVI+SRF DIFRGNAGKAGL+AA+V Q DV
Sbjct 61 KGSVLVAGPDFGTGSSREHAVWALSDFGFRVVIASRFADIFRGNAGKAGLVAAQVEQSDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKL+E+ PGLE+T +L++R ++A T V+PF IDD++ WRLLEGLDDI LTLR++D I
Sbjct 121 ELLWKLLEEQPGLELTVDLENRTVSAGTTVVPFNIDDYTRWRLLEGLDDIGLTLRQVDAI 180
Query 181 EAFEGACAYWKPRTLPA 197
FE + WKP TLPA
Sbjct 181 SEFEKSRPSWKPTTLPA 197
>gi|54026182|ref|YP_120424.1| isopropylmalate isomerase small subunit [Nocardia farcinica IFM
10152]
gi|81602533|sp|Q5YRY1.1|LEUD_NOCFA RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|54017690|dbj|BAD59060.1| putative isopropylmalate isomerase subunit [Nocardia farcinica
IFM 10152]
Length=202
Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/198 (77%), Positives = 170/198 (86%), Gaps = 0/198 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF H GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFED LFA WRSDP F+LN PF+
Sbjct 1 MEAFTVHKGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDALFAAWRSDPDFILNTEPFN 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RG+VLVAGPDFGTGSSREHAVWAL DYGFRVVISSRF DIFRGNAGK GLLAA+++Q+DV
Sbjct 61 RGTVLVAGPDFGTGSSREHAVWALSDYGFRVVISSRFADIFRGNAGKGGLLAAQMSQNDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
E+LWK+IE+ PGLE+ +L+DR +TA TVVLPF IDD++ WRLLEGLDDI LTLR+ D I
Sbjct 121 EMLWKMIEEQPGLELVVDLRDRTVTAGTVVLPFDIDDYTRWRLLEGLDDIGLTLRRSDVI 180
Query 181 EAFEGACAYWKPRTLPAP 198
FE A WKP TLPAP
Sbjct 181 AEFEKARPTWKPTTLPAP 198
>gi|226305896|ref|YP_002765856.1| 3-isopropylmalate dehydratase small subunit [Rhodococcus erythropolis
PR4]
gi|259494458|sp|C0ZXN2.1|LEUD_RHOE4 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|226185013|dbj|BAH33117.1| 3-isopropylmalate dehydratase small subunit [Rhodococcus erythropolis
PR4]
Length=202
Score = 317 bits (813), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 148/197 (76%), Positives = 174/197 (89%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME+F TH GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFAGWR+DP F+LNL+P+D
Sbjct 1 MESFTTHKGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAGWRTDPNFILNLAPYD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
+GSVLVAGPDFGTGSSREHAVWAL D+GFRVVI+SRF DIFRGNAGKAGL+AA+V Q DV
Sbjct 61 KGSVLVAGPDFGTGSSREHAVWALSDFGFRVVIASRFADIFRGNAGKAGLVAAQVEQSDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKL+E+ PGLE+T +L++R ++A T V+PF IDD++ WRLLEGLDDI LTLR+++ I
Sbjct 121 ELLWKLLEEQPGLELTVDLENRTVSAGTTVVPFNIDDYTRWRLLEGLDDIGLTLRQVEAI 180
Query 181 EAFEGACAYWKPRTLPA 197
FE + WKP TLPA
Sbjct 181 SEFEKSRPSWKPTTLPA 197
>gi|226365960|ref|YP_002783743.1| isopropylmalate isomerase small subunit [Rhodococcus opacus B4]
gi|226244450|dbj|BAH54798.1| 3-isopropylmalate dehydratase small subunit [Rhodococcus opacus
B4]
Length=202
Score = 315 bits (807), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 147/198 (75%), Positives = 173/198 (88%), Gaps = 0/198 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME+F TH GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR+DP FVLN++P+D
Sbjct 1 MESFSTHKGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRTDPKFVLNVAPYD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
+GSVLVAGPDFGTGSSREHAVWAL D+GFRVVI+SRF DIFRGNAGKAGLLAA+V+Q DV
Sbjct 61 KGSVLVAGPDFGTGSSREHAVWALSDFGFRVVIASRFADIFRGNAGKAGLLAAQVSQSDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKL+++ PGLE+ +L+++ +TA T V+PF IDD++ WRLLEGLDDI LTLR+++ I
Sbjct 121 ELLWKLLDEQPGLELVVDLENKTVTAGTTVVPFAIDDYTRWRLLEGLDDIGLTLRQVEAI 180
Query 181 EAFEGACAYWKPRTLPAP 198
FE A WKP TLP P
Sbjct 181 SEFEKARPSWKPVTLPEP 198
>gi|312140482|ref|YP_004007818.1| 3-isopropylmalate dehydratase small subunit leud [Rhodococcus
equi 103S]
gi|325675900|ref|ZP_08155584.1| 3-isopropylmalate dehydratase small subunit [Rhodococcus equi
ATCC 33707]
gi|311889821|emb|CBH49138.1| 3-isopropylmalate dehydratase small subunit LeuD [Rhodococcus
equi 103S]
gi|325553871|gb|EGD23549.1| 3-isopropylmalate dehydratase small subunit [Rhodococcus equi
ATCC 33707]
Length=203
Score = 315 bits (806), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 147/197 (75%), Positives = 171/197 (87%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR+DP F+LN++P+D
Sbjct 1 MEAFTTHKGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRTDPEFILNVAPYD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
+GSVLVAGPDFGTGSSREHAVWAL DYGFRVVI+SRF DIFRGNAGKAGLLAA+V Q DV
Sbjct 61 KGSVLVAGPDFGTGSSREHAVWALSDYGFRVVIASRFADIFRGNAGKAGLLAAQVEQSDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
E+LWKL+E+ PGLE+ +L + +TA T V+PF+IDD++ WRLLEGLDDI LTLR+++ I
Sbjct 121 EMLWKLLEEQPGLELVVDLASKTVTAGTTVVPFEIDDYTRWRLLEGLDDIGLTLRQVEAI 180
Query 181 EAFEGACAYWKPRTLPA 197
FE + WKP TLPA
Sbjct 181 SEFEKSRPSWKPATLPA 197
>gi|111023459|ref|YP_706431.1| isopropylmalate isomerase small subunit [Rhodococcus jostii RHA1]
gi|110822989|gb|ABG98273.1| 3-isopropylmalate dehydratase small subunit [Rhodococcus jostii
RHA1]
Length=202
Score = 313 bits (802), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 146/198 (74%), Positives = 173/198 (88%), Gaps = 0/198 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME+F TH GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR+DP FVLN++P+D
Sbjct 1 MESFSTHKGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRNDPNFVLNVAPYD 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
+GSVLVAGPDFGTGSSREHAVWAL D+GFRVVI+SRF DIFRGNAGKAGLLAA+VAQ DV
Sbjct 61 KGSVLVAGPDFGTGSSREHAVWALSDFGFRVVIASRFADIFRGNAGKAGLLAAQVAQSDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKL+++ PGLE+ +L+++ +TA T V+PF IDD++ WRL+EGLDDI LTLR+++ I
Sbjct 121 ELLWKLLDEQPGLELIVDLENKTVTAGTTVVPFAIDDYTRWRLIEGLDDIGLTLRQVEAI 180
Query 181 EAFEGACAYWKPRTLPAP 198
FE + WKP TLP P
Sbjct 181 SEFEKSRPSWKPATLPEP 198
>gi|293651863|pdb|3H5E|A Chain A, Leud_1-156 Small Subunit Of Isopropylmalate Isomerase
(Rv2987c) From Mycobacterium Tuberculosis
gi|293651864|pdb|3H5E|B Chain B, Leud_1-156 Small Subunit Of Isopropylmalate Isomerase
(Rv2987c) From Mycobacterium Tuberculosis
Length=159
Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 154/155 (99%), Positives = 155/155 (100%), Gaps = 0/155 (0%)
Query 2 EAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDR 61
EAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDR
Sbjct 5 EAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDR 64
Query 62 GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVE 121
GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVE
Sbjct 65 GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVE 124
Query 122 LLWKLIEQSPGLEITANLQDRIITAATVVLPFKID 156
+LWKLIEQSPGLEITANLQDRIITAATVVLPFKID
Sbjct 125 ILWKLIEQSPGLEITANLQDRIITAATVVLPFKID 159
>gi|333920848|ref|YP_004494429.1| 3-isopropylmalate dehydratase small subunit [Amycolicicoccus
subflavus DQS3-9A1]
gi|333483069|gb|AEF41629.1| 3-isopropylmalate dehydratase small subunit [Amycolicicoccus
subflavus DQS3-9A1]
Length=201
Score = 308 bits (790), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/197 (74%), Positives = 169/197 (86%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR+DP+F+LN+ P+
Sbjct 1 MEAFSTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRNDPSFILNVPPYQ 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
+GSVLVAGPDFGTGSSREHAVWAL D+GFRVVISSRF DIFRGN+GK GLLAA+V Q DV
Sbjct 61 QGSVLVAGPDFGTGSSREHAVWALSDFGFRVVISSRFADIFRGNSGKQGLLAAQVEQSDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWK +E+ PGLE+T +L+ + ++A T+V+PF IDD++ WRLLEGLDDI LTLR D I
Sbjct 121 ELLWKALEEQPGLEVTVDLESKTVSAGTLVVPFDIDDYTRWRLLEGLDDIGLTLRHADAI 180
Query 181 EAFEGACAYWKPRTLPA 197
FE WKP+TLPA
Sbjct 181 ADFESQRPAWKPKTLPA 197
>gi|260579000|ref|ZP_05846902.1| 3-isopropylmalate dehydratase, small subunit [Corynebacterium
jeikeium ATCC 43734]
gi|68263896|emb|CAI37384.1| leuD [Corynebacterium jeikeium K411]
gi|258602865|gb|EEW16140.1| 3-isopropylmalate dehydratase, small subunit [Corynebacterium
jeikeium ATCC 43734]
Length=208
Score = 305 bits (781), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/197 (72%), Positives = 163/197 (83%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F+TH+G+ PL RSNVDTDQIIPAV+LKRVTRTGFEDGLFAGWR DP F+LN P+
Sbjct 11 MEKFNTHTGVAAPLNRSNVDTDQIIPAVYLKRVTRTGFEDGLFAGWRKDPEFILNQEPYK 70
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
SVLVAGPDFGTGSSREHAVWALMDYGFRVV+SSRF DIFRGN+GKAGLLAA++ Q D+
Sbjct 71 NASVLVAGPDFGTGSSREHAVWALMDYGFRVVLSSRFADIFRGNSGKAGLLAAQMEQSDI 130
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
EL+WKL+EQ PG EIT NL+DR +T T F +DD++ WRL+EGLDDI LTLR + I
Sbjct 131 ELIWKLLEQQPGAEITVNLEDRTVTLGTHTFGFDVDDYTRWRLMEGLDDIGLTLRNEEAI 190
Query 181 EAFEGACAYWKPRTLPA 197
EAFE A +KPRT+PA
Sbjct 191 EAFESQRASFKPRTIPA 207
>gi|161986621|ref|YP_251002.2| isopropylmalate isomerase small subunit [Corynebacterium jeikeium
K411]
gi|85540687|sp|Q4JUX3.2|LEUD_CORJK RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
Length=198
Score = 304 bits (778), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 141/197 (72%), Positives = 163/197 (83%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F+TH+G+ PL RSNVDTDQIIPAV+LKRVTRTGFEDGLFAGWR DP F+LN P+
Sbjct 1 MEKFNTHTGVAAPLNRSNVDTDQIIPAVYLKRVTRTGFEDGLFAGWRKDPEFILNQEPYK 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
SVLVAGPDFGTGSSREHAVWALMDYGFRVV+SSRF DIFRGN+GKAGLLAA++ Q D+
Sbjct 61 NASVLVAGPDFGTGSSREHAVWALMDYGFRVVLSSRFADIFRGNSGKAGLLAAQMEQSDI 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
EL+WKL+EQ PG EIT NL+DR +T T F +DD++ WRL+EGLDDI LTLR + I
Sbjct 121 ELIWKLLEQQPGAEITVNLEDRTVTLGTHTFGFDVDDYTRWRLMEGLDDIGLTLRNEEAI 180
Query 181 EAFEGACAYWKPRTLPA 197
EAFE A +KPRT+PA
Sbjct 181 EAFESQRASFKPRTIPA 197
>gi|262203104|ref|YP_003274312.1| 3-isopropylmalate dehydratase small subunit [Gordonia bronchialis
DSM 43247]
gi|262086451|gb|ACY22419.1| 3-isopropylmalate dehydratase, small subunit [Gordonia bronchialis
DSM 43247]
Length=197
Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/197 (74%), Positives = 168/197 (86%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
M+ F H+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFAGWR+DP F+LN P+
Sbjct 1 MQPFTEHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAGWRADPDFILNNEPWR 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RGSVLVAGPDFGTGSSREHAVWAL D+GFRVVISSRF DIFRGNAGKAGL+AA+V Q DV
Sbjct 61 RGSVLVAGPDFGTGSSREHAVWALSDFGFRVVISSRFADIFRGNAGKAGLVAAQVEQSDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWK +E+ PGLE+T +L D+ +TAA +V+P IDD++ WRLLEGLDDI LTLR+++ I
Sbjct 121 ELLWKRLEEQPGLEVTVSLVDKTVTAADLVVPLAIDDYTRWRLLEGLDDIGLTLRQVEAI 180
Query 181 EAFEGACAYWKPRTLPA 197
A+E WKP TLPA
Sbjct 181 SAYESQRPAWKPVTLPA 197
>gi|326381557|ref|ZP_08203251.1| isopropylmalate isomerase small subunit [Gordonia neofelifaecis
NRRL B-59395]
gi|326199804|gb|EGD56984.1| isopropylmalate isomerase small subunit [Gordonia neofelifaecis
NRRL B-59395]
Length=196
Score = 296 bits (757), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/196 (72%), Positives = 166/196 (85%), Gaps = 0/196 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F TH+G+GVPL+RSNVDTDQIIPAV+LKRVTRTGFEDGLFAGWR+DP F+LN P+
Sbjct 1 MEPFITHTGVGVPLQRSNVDTDQIIPAVYLKRVTRTGFEDGLFAGWRNDPDFILNNEPWS 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWALMD+GFRVVISSRF DIFRGN+GKAGL+AA+V Q DV
Sbjct 61 NGSVLVAGPDFGTGSSREHAVWALMDFGFRVVISSRFADIFRGNSGKAGLVAAQVDQSDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
EL+WK +E PGLE+T +L+DR +TA +V+P +IDD++ WRL+EGLDDI LTLR+ D I
Sbjct 121 ELIWKRLEAEPGLEVTVSLEDRTVTAGDLVVPLQIDDYTRWRLMEGLDDIGLTLRQTDAI 180
Query 181 EAFEGACAYWKPRTLP 196
+E +KP TLP
Sbjct 181 AEYESHRPSFKPTTLP 196
>gi|229820066|ref|YP_002881592.1| isopropylmalate isomerase small subunit [Beutenbergia cavernae
DSM 12333]
gi|259494352|sp|C5C3D1.1|LEUD_BEUC1 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|229565979|gb|ACQ79830.1| 3-isopropylmalate dehydratase, small subunit [Beutenbergia cavernae
DSM 12333]
Length=212
Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/197 (72%), Positives = 162/197 (83%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F TH+G+GVPLRRSNVDTDQIIPAV+LKRVTRTGFED LFA WR + FVLN +
Sbjct 1 MEKFTTHTGVGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDALFAAWRGNETFVLNQPAYT 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWAL DYGFRVVI+SRF DIFRGN+GK GLLAA+VAQDDV
Sbjct 61 HGSVLVAGPDFGTGSSREHAVWALKDYGFRVVIASRFADIFRGNSGKQGLLAAQVAQDDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
EL+WK++E SPG E+T +L + +T A +V PF+IDD++ WRLLEGLDDI LTL+ DEI
Sbjct 121 ELIWKVLENSPGTEVTVDLAAKQVTVADIVAPFQIDDYTRWRLLEGLDDIGLTLQHADEI 180
Query 181 EAFEGACAYWKPRTLPA 197
AFE W+P TLPA
Sbjct 181 TAFEATREPWRPLTLPA 197
>gi|296130154|ref|YP_003637404.1| 3-isopropylmalate dehydratase, small subunit [Cellulomonas flavigena
DSM 20109]
gi|296021969|gb|ADG75205.1| 3-isopropylmalate dehydratase, small subunit [Cellulomonas flavigena
DSM 20109]
Length=222
Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/197 (72%), Positives = 162/197 (83%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F H+G+GVPLRRSNVDTDQIIPAV+LKRVTRTGFED LFA WR DP FVLN +
Sbjct 1 MEKFTQHTGVGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDALFAAWRGDPEFVLNQDAYR 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWAL DYGFRVVIS+RF DIFRGN+GK GLLAA+VAQ+DV
Sbjct 61 AGSVLVAGPDFGTGSSREHAVWALKDYGFRVVISARFADIFRGNSGKQGLLAAQVAQEDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWK++E PG E+T +L+ R +T VV+PF++DD++ WRL+EGLDDI LTL+ DEI
Sbjct 121 ELLWKILETRPGTEVTVDLESRTVTCDDVVVPFQVDDYTRWRLIEGLDDIGLTLQHADEI 180
Query 181 EAFEGACAYWKPRTLPA 197
AFE W+P TLPA
Sbjct 181 TAFEQRRESWRPATLPA 197
>gi|116671064|ref|YP_831997.1| isopropylmalate isomerase small subunit [Arthrobacter sp. FB24]
gi|166989795|sp|A0JXX7.1|LEUD_ARTS2 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|116611173|gb|ABK03897.1| 3-isopropylmalate dehydratase, small subunit [Arthrobacter sp.
FB24]
Length=200
Score = 295 bits (754), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 136/197 (70%), Positives = 164/197 (84%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F TH+GIGVPLR+SNVDTDQIIPAV+LKR+TRTGFED LFA WR DPAF+LN PF+
Sbjct 1 MEKFSTHTGIGVPLRQSNVDTDQIIPAVYLKRITRTGFEDALFAAWRKDPAFILNQEPFN 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWAL D+GF+ V+SSRF DIFRGN+GK GLLAAEVAQDD+
Sbjct 61 AGSVLVAGPDFGTGSSREHAVWALKDFGFKTVLSSRFADIFRGNSGKQGLLAAEVAQDDI 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
EL+WK++E +PG E+T +L + + VV PF+IDD++ WRLLEGLDDI LTL+ ++I
Sbjct 121 ELIWKVLENAPGTEVTVDLVSKTVMCGNVVAPFEIDDYTRWRLLEGLDDIGLTLQHEEDI 180
Query 181 EAFEGACAYWKPRTLPA 197
A+E +KP+TLPA
Sbjct 181 TAYEATRPAFKPKTLPA 197
>gi|309813282|ref|ZP_07706998.1| 3-isopropylmalate dehydratase, small subunit [Dermacoccus sp.
Ellin185]
gi|308432778|gb|EFP56694.1| 3-isopropylmalate dehydratase, small subunit [Dermacoccus sp.
Ellin185]
Length=197
Score = 293 bits (751), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 141/195 (73%), Positives = 161/195 (83%), Gaps = 0/195 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
M+ F TH+G+GVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLF+ WR DP+FVLN +
Sbjct 1 MDKFTTHTGVGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFSAWRKDPSFVLNTEAYR 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRF DIFRGN+GKAGLL A+V Q DV
Sbjct 61 DGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFADIFRGNSGKAGLLTAQVEQGDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWK ++ PG +IT +L R I A +V+PF +DD+ WRL+EGLDDI+LTLR D+I
Sbjct 121 ELLWKYLDNEPGAQITVDLGSRTIHAGELVVPFAVDDYIRWRLMEGLDDISLTLRHEDDI 180
Query 181 EAFEGACAYWKPRTL 195
EAFE A WKP TL
Sbjct 181 EAFEDARPSWKPSTL 195
>gi|343926839|ref|ZP_08766332.1| 3-isopropylmalate dehydratase small subunit [Gordonia alkanivorans
NBRC 16433]
gi|343763199|dbj|GAA13258.1| 3-isopropylmalate dehydratase small subunit [Gordonia alkanivorans
NBRC 16433]
Length=197
Score = 293 bits (751), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 140/195 (72%), Positives = 164/195 (85%), Gaps = 0/195 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
M+ F H+GIGVPLRRSNVDTDQIIPA +LKRVTRTGFEDGLFAGWR+DP F+LN P+
Sbjct 1 MQPFTEHTGIGVPLRRSNVDTDQIIPAEYLKRVTRTGFEDGLFAGWRTDPDFILNNEPWS 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWAL D+GFRVVISSRF DIFRGNAGKAGL+AA+V Q DV
Sbjct 61 NGSVLVAGPDFGTGSSREHAVWALSDFGFRVVISSRFADIFRGNAGKAGLVAAQVEQSDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWK +E+SPG+EIT +L D+ +TA +V+P IDD++ WRL+EGLDDI LTLR++D I
Sbjct 121 ELLWKRLEESPGMEITVSLVDKTVTAGDLVVPLAIDDYTRWRLMEGLDDIGLTLRQVDAI 180
Query 181 EAFEGACAYWKPRTL 195
+E +KPRTL
Sbjct 181 SEYESKRPSFKPRTL 195
>gi|257054960|ref|YP_003132792.1| 3-isopropylmalate dehydratase, small subunit [Saccharomonospora
viridis DSM 43017]
gi|256584832|gb|ACU95965.1| 3-isopropylmalate dehydratase, small subunit [Saccharomonospora
viridis DSM 43017]
Length=197
Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/196 (72%), Positives = 160/196 (82%), Gaps = 0/196 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F TH+GIGVPLR SNVDTDQIIPAV+LKRV+RTGFEDGLFAGWR D FVLN P++
Sbjct 1 MEPFTTHTGIGVPLRASNVDTDQIIPAVYLKRVSRTGFEDGLFAGWRRDEQFVLNREPYN 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
RG+VLVAGPDFGTGSSREHAVWALMDYGFRVVISSRF DIFRGN+GK GLL A+ Q DV
Sbjct 61 RGTVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFADIFRGNSGKQGLLTAQCEQADV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
E LWKL+E PG E+T +L+++ + A V F IDD++ WRLLEGLDDIALTLR +D+I
Sbjct 121 EQLWKLLETEPGTEVTVDLREKTVRAKDFVTRFSIDDYTRWRLLEGLDDIALTLRHVDDI 180
Query 181 EAFEGACAYWKPRTLP 196
EAFE +KP T P
Sbjct 181 EAFEKQRPAYKPTTTP 196
>gi|332670961|ref|YP_004453969.1| 3-isopropylmalate dehydratase, small subunit [Cellulomonas fimi
ATCC 484]
gi|332339999|gb|AEE46582.1| 3-isopropylmalate dehydratase, small subunit [Cellulomonas fimi
ATCC 484]
Length=219
Score = 291 bits (746), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 136/197 (70%), Positives = 161/197 (82%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F H+G+GVPLRRSNVDTDQIIPAV+LKRVTRTGFED LFA WR DP FVLN +
Sbjct 1 MEKFTQHTGVGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDALFAAWRGDPEFVLNQDAYR 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWAL DYGF+VV+S+RF DIFRGN+GK GLLAA+ AQ+D+
Sbjct 61 SGSVLVAGPDFGTGSSREHAVWALKDYGFKVVVSARFADIFRGNSGKQGLLAAQAAQEDI 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
EL+WK++E PG E+T +L+ + +T VV+PF +DD++ WRLLEGLDDI LTL+ DEI
Sbjct 121 ELIWKILETRPGTEVTVDLESKTLTCDDVVVPFHVDDYTRWRLLEGLDDIGLTLQHADEI 180
Query 181 EAFEGACAYWKPRTLPA 197
AFE W+PRTLPA
Sbjct 181 TAFEETREPWRPRTLPA 197
>gi|269794434|ref|YP_003313889.1| 3-isopropylmalate dehydratase small subunit [Sanguibacter keddieii
DSM 10542]
gi|269096619|gb|ACZ21055.1| 3-isopropylmalate dehydratase, small subunit [Sanguibacter keddieii
DSM 10542]
Length=212
Score = 291 bits (745), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 136/197 (70%), Positives = 163/197 (83%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F TH+G+GVPLRRSNVDTDQIIPAV+LKRVTRTGFED LFA WR D +FVLN +
Sbjct 1 MEKFATHTGVGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDALFAAWRGDESFVLNQPAYT 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWAL DYGF+ V+S+RF DIFRGN+GK GLLAA++AQ+D+
Sbjct 61 SGSVLVAGPDFGTGSSREHAVWALKDYGFKAVLSARFADIFRGNSGKQGLLAAQLAQEDI 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWK++E PG E+T NL DR +A VV+PF++DD++ WRL+EGLDDI LTL+ EI
Sbjct 121 ELLWKVLETKPGTEVTVNLVDRTASADDVVVPFQVDDYTRWRLMEGLDDIGLTLQHEAEI 180
Query 181 EAFEGACAYWKPRTLPA 197
FE + A W+P+TLPA
Sbjct 181 TEFEESRAAWRPKTLPA 197
>gi|336320268|ref|YP_004600236.1| 3-isopropylmalate dehydratase, small subunit [Cellvibrio gilvus
ATCC 13127]
gi|336103849|gb|AEI11668.1| 3-isopropylmalate dehydratase, small subunit [Cellvibrio gilvus
ATCC 13127]
Length=220
Score = 291 bits (745), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 136/197 (70%), Positives = 163/197 (83%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F H+G+GVPLRRSNVDTDQIIPAV+LKRVTRTGFED LFA WR DPAFVLN +
Sbjct 1 MEKFTQHTGVGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDALFAAWRGDPAFVLNQDAYR 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWAL DYGF+VV+S+RF DIFRGN+GK GLLAA+VAQ+D+
Sbjct 61 TGSVLVAGPDFGTGSSREHAVWALKDYGFKVVLSARFADIFRGNSGKQGLLAAQVAQEDI 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
EL+WK++E PG +T +L R +T VV+PF++DD++ WRL+EGLDDI LTL+ +DEI
Sbjct 121 ELIWKILETHPGTAVTVDLDARTVTCDDVVVPFQVDDYTRWRLMEGLDDIGLTLQHVDEI 180
Query 181 EAFEGACAYWKPRTLPA 197
+AFE W+P TLPA
Sbjct 181 QAFEERREPWRPATLPA 197
>gi|172040455|ref|YP_001800169.1| hypothetical protein cur_0775 [Corynebacterium urealyticum DSM
7109]
gi|171851759|emb|CAQ04735.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length=247
Score = 290 bits (743), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/197 (70%), Positives = 157/197 (80%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME FHTH+G+ PL RSNVDTDQIIPAV+LKRVTRTGFEDGLFAGWR P FVLN F
Sbjct 47 MEKFHTHTGVAAPLMRSNVDTDQIIPAVYLKRVTRTGFEDGLFAGWRQSPDFVLNQDAFK 106
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
SVLVAGPDFGTGSSREHAVWALMDYGFRVV+SSRF DIF+GN+ KAGLLAA V Q D+
Sbjct 107 NASVLVAGPDFGTGSSREHAVWALMDYGFRVVLSSRFADIFKGNSSKAGLLAANVEQSDI 166
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
EL+WKLIEQ+PG+E+T NL+DR T + ++DD++ WRL+EGLDDI LTLR + I
Sbjct 167 ELMWKLIEQNPGIEMTVNLEDRTATLGSHTFNIEVDDYTRWRLMEGLDDIGLTLRNEEAI 226
Query 181 EAFEGACAYWKPRTLPA 197
FE +KP+TLPA
Sbjct 227 SEFEAGRPSFKPKTLPA 243
>gi|334337605|ref|YP_004542757.1| 3-isopropylmalate dehydratase small subunit [Isoptericola variabilis
225]
gi|334107973|gb|AEG44863.1| 3-isopropylmalate dehydratase small subunit [Isoptericola variabilis
225]
Length=211
Score = 290 bits (743), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 135/197 (69%), Positives = 161/197 (82%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F TH+G+GVPLRRSNVDTDQIIPAV+LKRVTRTGFED LFA WR DP+FVLN +
Sbjct 1 MEKFTTHTGVGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDALFAAWRGDPSFVLNQEAYK 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWAL DYGFRVV++SRF DIFRGN+GK GL+A VAQ+D+
Sbjct 61 NGSVLVAGPDFGTGSSREHAVWALKDYGFRVVLASRFADIFRGNSGKQGLVAGVVAQEDI 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWK++E PG E+T +L+ R + A V +PF+IDD++ WRL+EGLDDI LTL+ +I
Sbjct 121 ELLWKILETKPGTEVTVDLEQRTVHADDVTVPFQIDDYTRWRLMEGLDDIGLTLQNEADI 180
Query 181 EAFEGACAYWKPRTLPA 197
AFE W+P+TLPA
Sbjct 181 TAFEAKRESWRPKTLPA 197
>gi|119963900|ref|YP_948211.1| isopropylmalate isomerase small subunit [Arthrobacter aurescens
TC1]
gi|166989794|sp|A1R7J9.1|LEUD_ARTAT RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|119950759|gb|ABM09670.1| 3-isopropylmalate dehydratase, small subunit [Arthrobacter aurescens
TC1]
Length=202
Score = 290 bits (742), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 135/197 (69%), Positives = 162/197 (83%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
MEAF TH+GIGVPLR+SNVDTDQIIPAV+LKR+TRTGFED LFA WR D +F+LN +PF+
Sbjct 1 MEAFTTHTGIGVPLRQSNVDTDQIIPAVYLKRITRTGFEDALFAAWRKDESFILNQAPFN 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWAL DYGF+ V+SSRF DIFRGN+GK GLLAA+VAQDD+
Sbjct 61 AGSVLVAGPDFGTGSSREHAVWALKDYGFKAVLSSRFADIFRGNSGKQGLLAAQVAQDDI 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
EL+WK++E PG EI +L + + VV PF+IDD++ WRLLEGLDDI LTL+ +I
Sbjct 121 ELIWKVLENHPGTEIKVDLVSKTVECGNVVAPFEIDDYTRWRLLEGLDDIGLTLQHEADI 180
Query 181 EAFEGACAYWKPRTLPA 197
A+E +KP+TLPA
Sbjct 181 TAYEATRPSFKPKTLPA 197
>gi|302524988|ref|ZP_07277330.1| 3-isopropylmalate dehydratase, small subunit [Streptomyces sp.
AA4]
gi|302433883|gb|EFL05699.1| 3-isopropylmalate dehydratase, small subunit [Streptomyces sp.
AA4]
Length=200
Score = 290 bits (742), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 139/197 (71%), Positives = 158/197 (81%), Gaps = 0/197 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F H+GIGVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR+ F+LN PF
Sbjct 1 MEPFTQHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRAQEDFILNQEPFK 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWAL+DYGFRVVISSRF DIFRGN+GK GL+AA+ Q DV
Sbjct 61 NGSVLVAGPDFGTGSSREHAVWALLDYGFRVVISSRFADIFRGNSGKGGLVAAQCEQSDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKL+E PG E++ +L+ + + A PF+IDD+ WRLLEGLDDIALTLR +I
Sbjct 121 ELLWKLLENEPGTEVSVDLEAKTVRAKDFTAPFQIDDYVRWRLLEGLDDIALTLRHAGDI 180
Query 181 EAFEGACAYWKPRTLPA 197
+AFE WKP TLPA
Sbjct 181 DAFEAQRPSWKPATLPA 197
>gi|145295457|ref|YP_001138278.1| isopropylmalate isomerase small subunit [Corynebacterium glutamicum
R]
gi|166989810|sp|A4QDS9.1|LEUD_CORGB RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate
isomerase
gi|140845377|dbj|BAF54376.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344043480|gb|EGV39173.1| isopropylmalate isomerase small subunit [Corynebacterium glutamicum
S9114]
Length=197
Score = 289 bits (740), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/195 (71%), Positives = 161/195 (83%), Gaps = 1/195 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWR-SDPAFVLNLSPF 59
ME F TH+G+GVPL+RSNVDTDQIIPAV+LKRVTRTGFEDGLF+ WR +DP FVLN +
Sbjct 1 MEKFTTHTGVGVPLQRSNVDTDQIIPAVYLKRVTRTGFEDGLFSNWRQNDPNFVLNTETY 60
Query 60 DRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDD 119
GSVL+AGPDFGTGSSREHAVWALMDYGFR V SSRF DIFRGN+GKAGLL + Q D
Sbjct 61 KNGSVLIAGPDFGTGSSREHAVWALMDYGFRAVFSSRFADIFRGNSGKAGLLTGIMEQSD 120
Query 120 VELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDE 179
+ELLWKL+EQ+PGLE+T NL+ +I+TA VV+ F++D + WRL+EGLDD LTLRKLDE
Sbjct 121 IELLWKLMEQTPGLELTVNLEKQIVTAGDVVISFEVDPYIRWRLMEGLDDAGLTLRKLDE 180
Query 180 IEAFEGACAYWKPRT 194
IE +E +KPRT
Sbjct 181 IEDYEAKRPAFKPRT 195
>gi|300783646|ref|YP_003763937.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Amycolatopsis mediterranei U32]
gi|299793160|gb|ADJ43535.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Amycolatopsis mediterranei U32]
gi|340525036|gb|AEK40241.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Amycolatopsis mediterranei S699]
Length=200
Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/196 (70%), Positives = 157/196 (81%), Gaps = 0/196 (0%)
Query 1 MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFD 60
ME F H+G+GVPLRRSNVDTDQIIPAV+LKRVTRTGFEDGLFA WR D F+LN PF
Sbjct 1 MEPFTQHTGVGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRGDEQFILNQEPFR 60
Query 61 RGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDV 120
GSVLVAGPDFGTGSSREHAVWALMDYGF+VV+S+RF DIFRGN+GK GL+AA+ Q DV
Sbjct 61 NGSVLVAGPDFGTGSSREHAVWALMDYGFKVVVSARFADIFRGNSGKGGLVAAQCEQHDV 120
Query 121 ELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEI 180
ELLWKL+E PG E+T +L+ + + A PF+IDD+ WRLLEGLDDIALTLR EI
Sbjct 121 ELLWKLLENEPGTEVTVDLETKTVRAKDFTAPFQIDDYVRWRLLEGLDDIALTLRHAGEI 180
Query 181 EAFEGACAYWKPRTLP 196
++FE + WKP T P
Sbjct 181 DSFEASRPSWKPTTTP 196
Lambda K H
0.322 0.140 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 211830921192
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40