BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2989 Length=233 Score E Sequences producing significant alignments: (Bits) Value gi|15842545|ref|NP_337582.1| IclR family transcriptional regulat... 451 5e-125 gi|15610126|ref|NP_217505.1| transcriptional regulatory protein ... 448 3e-124 gi|298526459|ref|ZP_07013868.1| conserved hypothetical protein [... 446 2e-123 gi|41409125|ref|NP_961961.1| hypothetical protein MAP3027 [Mycob... 388 3e-106 gi|240168950|ref|ZP_04747609.1| hypothetical protein MkanA1_0653... 379 2e-103 gi|342858184|ref|ZP_08714839.1| hypothetical protein MCOL_04901 ... 378 4e-103 gi|296171283|ref|ZP_06852687.1| IclR family transcriptional regu... 373 1e-101 gi|118462472|ref|YP_883006.1| IclR family transcriptional regula... 362 2e-98 gi|183981738|ref|YP_001850029.1| transcriptional regulatory prot... 361 6e-98 gi|118617553|ref|YP_905885.1| transcriptional regulatory protein... 355 3e-96 gi|120403126|ref|YP_952955.1| regulatory proteins IclR [Mycobact... 351 4e-95 gi|169630376|ref|YP_001704025.1| IclR family transcriptional reg... 349 2e-94 gi|294993924|ref|ZP_06799615.1| IclR family transcriptional regu... 349 2e-94 gi|145224807|ref|YP_001135485.1| regulatory protein IclR [Mycoba... 345 4e-93 gi|315445137|ref|YP_004078016.1| IclR family transcriptional reg... 343 1e-92 gi|254819113|ref|ZP_05224114.1| hypothetical protein MintA_04260... 340 9e-92 gi|118467638|ref|YP_886726.1| IclR family transcriptional regula... 340 9e-92 gi|108798888|ref|YP_639085.1| IclR family transcriptional regula... 337 7e-91 gi|333991332|ref|YP_004523946.1| transcriptional regulator [Myco... 331 5e-89 gi|312140484|ref|YP_004007820.1| iclr family transcriptional reg... 306 1e-81 gi|111023457|ref|YP_706429.1| transcriptional regulator [Rhodoco... 305 5e-81 gi|226365958|ref|YP_002783741.1| IclR family transcriptional reg... 304 7e-81 gi|331695679|ref|YP_004331918.1| IclR family transcriptional reg... 301 4e-80 gi|302524986|ref|ZP_07277328.1| transcriptional regulator [Strep... 301 5e-80 gi|257054958|ref|YP_003132790.1| transcriptional regulator [Sacc... 299 2e-79 gi|226305894|ref|YP_002765854.1| IclR family transcriptional reg... 298 5e-79 gi|229493391|ref|ZP_04387180.1| transcriptional regulator [Rhodo... 297 6e-79 gi|256380000|ref|YP_003103660.1| IclR family transcriptional reg... 295 5e-78 gi|54026184|ref|YP_120426.1| putative transcriptional regulator ... 283 1e-74 gi|262203106|ref|YP_003274314.1| IclR family transcriptional reg... 282 3e-74 gi|300783644|ref|YP_003763935.1| IclR family transcriptional reg... 275 4e-72 gi|343926841|ref|ZP_08766334.1| putative IclR family transcripti... 274 7e-72 gi|324998714|ref|ZP_08119826.1| transcriptional regulator [Pseud... 274 8e-72 gi|296140543|ref|YP_003647786.1| IclR family transcriptional reg... 272 4e-71 gi|291004732|ref|ZP_06562705.1| IclR family transcriptional regu... 271 6e-71 gi|333920851|ref|YP_004494432.1| IclR family transcriptional reg... 269 2e-70 gi|134102582|ref|YP_001108243.1| IclR family transcriptional reg... 269 2e-70 gi|319951155|ref|ZP_08025000.1| IclR family transcriptional regu... 266 1e-69 gi|326381555|ref|ZP_08203249.1| transcriptional regulator IclR [... 263 2e-68 gi|258651709|ref|YP_003200865.1| IclR family transcriptional reg... 258 4e-67 gi|289763169|ref|ZP_06522547.1| hypothetical transcriptional reg... 244 1e-62 gi|330466237|ref|YP_004403980.1| IclR family transcriptional reg... 242 2e-62 gi|145593808|ref|YP_001158105.1| regulatory protein IclR [Salini... 239 3e-61 gi|302865829|ref|YP_003834466.1| transcriptional regulator IclR ... 239 3e-61 gi|159036794|ref|YP_001536047.1| IclR family transcriptional reg... 239 3e-61 gi|238063252|ref|ZP_04607961.1| IclR family transcriptional regu... 238 5e-61 gi|213964619|ref|ZP_03392819.1| regulatory protein, IclR [Coryne... 235 4e-60 gi|291302452|ref|YP_003513730.1| IclR family transcriptional reg... 234 1e-59 gi|284992436|ref|YP_003410990.1| IclR family transcriptional reg... 227 8e-58 gi|296270763|ref|YP_003653395.1| IclR family transcriptional reg... 223 1e-56 >gi|15842545|ref|NP_337582.1| IclR family transcriptional regulator [Mycobacterium tuberculosis CDC1551] gi|289448660|ref|ZP_06438404.1| transcriptional regulator [Mycobacterium tuberculosis CPHL_A] gi|13882856|gb|AAK47396.1| transcriptional regulator, IclR family [Mycobacterium tuberculosis CDC1551] gi|289421618|gb|EFD18819.1| transcriptional regulator [Mycobacterium tuberculosis CPHL_A] Length=267 Score = 451 bits (1159), Expect = 5e-125, Method: Compositional matrix adjust. Identities = 233/233 (100%), Positives = 233/233 (100%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG Sbjct 35 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 94 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL Sbjct 95 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 154 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE Sbjct 155 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 214 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL Sbjct 215 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 267 >gi|15610126|ref|NP_217505.1| transcriptional regulatory protein [Mycobacterium tuberculosis H37Rv] gi|31794165|ref|NP_856658.1| transcriptional regulatory protein [Mycobacterium bovis AF2122/97] gi|121638870|ref|YP_979094.1| putative transcriptional regulatory protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 71 more sequence titles Length=233 Score = 448 bits (1153), Expect = 3e-124, Method: Compositional matrix adjust. Identities = 232/233 (99%), Positives = 233/233 (100%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG Sbjct 1 MRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL Sbjct 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE Sbjct 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL Sbjct 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 >gi|298526459|ref|ZP_07013868.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298496253|gb|EFI31547.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=233 Score = 446 bits (1146), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 231/233 (99%), Positives = 232/233 (99%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG Sbjct 1 MRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL Sbjct 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 R TVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE Sbjct 121 RATVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL Sbjct 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 >gi|41409125|ref|NP_961961.1| hypothetical protein MAP3027 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776262|ref|ZP_05217778.1| hypothetical protein MaviaA2_16548 [Mycobacterium avium subsp. avium ATCC 25291] gi|41397945|gb|AAS05575.1| hypothetical protein MAP_3027 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459115|gb|EGO38063.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis S397] Length=233 Score = 388 bits (997), Expect = 3e-106, Method: Compositional matrix adjust. Identities = 199/233 (86%), Positives = 213/233 (92%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAVGVLH VA+SPCGLAELC+RT+LPRATAYRLAAALEVHRLL RG DG Sbjct 1 MRQHSGIGVLDKAVGVLHTVAQSPCGLAELCERTELPRATAYRLAAALEVHRLLARGDDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 WRLGPA+TELA HV+DPLL A +AVLP LR+ TGESVQ+YRREGT RVCVAALEPAAGL Sbjct 61 RWRLGPAVTELAAHVNDPLLAAGSAVLPLLRETTGESVQLYRREGTDRVCVAALEPAAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVGARLPMTAGSGAKVLLAH+DAATQ AVL A F+ R LAEV RRGWAQSVAERE Sbjct 121 RDTVPVGARLPMTAGSGAKVLLAHSDAATQKAVLANAKFTERTLAEVRRRGWAQSVAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRD RG VIAAISVSGPIDR+GRRPG RWAADL+SAA+ALTRRL Sbjct 181 PGVASVSAPVRDSRGAVIAAISVSGPIDRIGRRPGARWAADLVSAAEALTRRL 233 >gi|240168950|ref|ZP_04747609.1| hypothetical protein MkanA1_06535 [Mycobacterium kansasii ATCC 12478] Length=233 Score = 379 bits (973), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 192/233 (83%), Positives = 212/233 (91%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAVG+LHA+AESPCGLAELCDRT LPRATAYRLAAALEVHRLLGR ++G Sbjct 1 MRQHSGIGVLDKAVGLLHAIAESPCGLAELCDRTGLPRATAYRLAAALEVHRLLGRDEEG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 WRLGPA++ELA HV+D LL A AVLP+LR+ TGESVQ+YRREGT+RVCVAALEPAAGL Sbjct 61 RWRLGPAVSELAAHVNDSLLAASNAVLPKLRETTGESVQLYRREGTTRVCVAALEPAAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVGARLPMTAGSGAKVLLA++DAA Q AVLP A F R LAEV RRGWAQSVAERE Sbjct 121 RDTVPVGARLPMTAGSGAKVLLAYSDAAIQQAVLPNAKFGERVLAEVRRRGWAQSVAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRD RGVV+AAISVSGP+DRMGRRPG RWAADL++AA+ +T RL Sbjct 181 PGVASVSAPVRDRRGVVVAAISVSGPVDRMGRRPGARWAADLVAAAEEITGRL 233 >gi|342858184|ref|ZP_08714839.1| hypothetical protein MCOL_04901 [Mycobacterium colombiense CECT 3035] gi|342133888|gb|EGT87068.1| hypothetical protein MCOL_04901 [Mycobacterium colombiense CECT 3035] Length=233 Score = 378 bits (971), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 192/233 (83%), Positives = 211/233 (91%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAVG+LH +++SPCGLAELC+RT LPRATAYRLAAALEVHRLL R +G Sbjct 1 MRQHSGIGVLDKAVGILHTISQSPCGLAELCERTSLPRATAYRLAAALEVHRLLARDDEG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 W LGPA++ELA HV+DPLL A AAVLP LR+ TGESVQ+YRREGT RVCVAALEPAAGL Sbjct 61 RWCLGPAVSELAAHVNDPLLAASAAVLPLLRETTGESVQLYRREGTDRVCVAALEPAAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVP+GARLPMTAGSGAKVLLAH+DAATQ AVL A F+ R LAEV RRGWAQSVAERE Sbjct 121 RDTVPIGARLPMTAGSGAKVLLAHSDAATQKAVLATAKFTERTLAEVRRRGWAQSVAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRDGRG V+AAISVSGPIDR+GRRPG RWAADLLSAA+A+TRRL Sbjct 181 PGVASVSAPVRDGRGGVVAAISVSGPIDRIGRRPGARWAADLLSAAEAITRRL 233 >gi|296171283|ref|ZP_06852687.1| IclR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894251|gb|EFG74008.1| IclR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=233 Score = 373 bits (957), Expect = 1e-101, Method: Compositional matrix adjust. Identities = 191/233 (82%), Positives = 206/233 (89%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAV +LH A+ PCGLAELC RT LPRATAYRLAAALEVHRLL R +G Sbjct 1 MRQHSGIGVLDKAVDILHTTAQFPCGLAELCQRTGLPRATAYRLAAALEVHRLLARDGEG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 W LGPA+TELA HV+DPLL A A VLP LR+ TGESVQ+YRREGT+RVCVAALEPAAGL Sbjct 61 RWGLGPAVTELAAHVNDPLLAASAGVLPLLRETTGESVQLYRREGTTRVCVAALEPAAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVGARLPMTAGSGAKVLLAH+DAATQ AVLP A F+ R LAEV RRGWAQSVAERE Sbjct 121 RDTVPVGARLPMTAGSGAKVLLAHSDAATQKAVLPAAKFTERTLAEVRRRGWAQSVAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVS PVRDGRG V+AAISVSGP+DR+GRRP RWAADLLSAA+ALTRRL Sbjct 181 PGVASVSVPVRDGRGAVVAAISVSGPVDRIGRRPAARWAADLLSAAEALTRRL 233 >gi|118462472|ref|YP_883006.1| IclR family transcriptional regulator [Mycobacterium avium 104] gi|118163759|gb|ABK64656.1| transcriptional regulator, IclR family protein [Mycobacterium avium 104] Length=220 Score = 362 bits (929), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 186/220 (85%), Positives = 200/220 (91%), Gaps = 0/220 (0%) Query 14 VGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRLGPAITELAT 73 +GVLH VA+SPCGLAELC+RT+LPRATAYRLAAALEVHRLL RG DG WRLGPA+TELA Sbjct 1 MGVLHTVAQSPCGLAELCERTELPRATAYRLAAALEVHRLLARGDDGRWRLGPAVTELAA 60 Query 74 HVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTVPVGARLPMT 133 HV+DPLL A +AVLP LR+ TGESVQ+YRREGT RVCVAALEPAAGLRDTVPVGARLPMT Sbjct 61 HVNDPLLAAGSAVLPLLRETTGESVQLYRREGTDRVCVAALEPAAGLRDTVPVGARLPMT 120 Query 134 AGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVASVSAPVRDG 193 AGSGAKVLLAH+DAATQ AVL A F+ R LAEV RRGWAQSVAEREPGVASVSAPVRD Sbjct 121 AGSGAKVLLAHSDAATQKAVLANAKFTERTLAEVRRRGWAQSVAEREPGVASVSAPVRDS 180 Query 194 RGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 RG VIAAISVSGPIDR+GRRPG RWAADL+SAA+ALTRRL Sbjct 181 RGAVIAAISVSGPIDRIGRRPGARWAADLVSAAEALTRRL 220 >gi|183981738|ref|YP_001850029.1| transcriptional regulatory protein [Mycobacterium marinum M] gi|183175064|gb|ACC40174.1| transcriptional regulatory protein [Mycobacterium marinum M] Length=233 Score = 361 bits (926), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 197/233 (85%), Positives = 210/233 (91%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQ SGIGV+DKAVG+L A AESPCGLAELC+RT LPRATAYRLAAALEVHRLLGR +DG Sbjct 1 MRQDSGIGVIDKAVGLLRATAESPCGLAELCERTGLPRATAYRLAAALEVHRLLGRDEDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 W LGPAITELA HVDDPLL A A VLP+LR+ TGESVQ+YRREGTSRVCVAALEP AGL Sbjct 61 RWGLGPAITELAAHVDDPLLTAGATVLPRLRETTGESVQLYRREGTSRVCVAALEPPAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVGARLPMTAGSGAKVLLAH+D ATQ AVLP A F+ R LAEV RRGWAQSVAERE Sbjct 121 RDTVPVGARLPMTAGSGAKVLLAHSDPATQQAVLPTAKFTDRVLAEVRRRGWAQSVAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRDGRGVV+AAISVSGPIDR+GRRPG RWAADLL+AAD L RRL Sbjct 181 PGVASVSAPVRDGRGVVVAAISVSGPIDRIGRRPGARWAADLLAAADELARRL 233 >gi|118617553|ref|YP_905885.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99] gi|118569663|gb|ABL04414.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99] Length=233 Score = 355 bits (911), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 195/233 (84%), Positives = 209/233 (90%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQ SGIGV+DKAVG+L A A+SPCGLAELC+RT LPRATAYRLAAALEVHRLLGR +DG Sbjct 1 MRQDSGIGVIDKAVGLLRATAKSPCGLAELCERTGLPRATAYRLAAALEVHRLLGRDEDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 W LGPAITELA HVDDPLL A A VLP+L + TGESVQ+YRREGTSRVCVAALEP AGL Sbjct 61 RWGLGPAITELAAHVDDPLLTAGATVLPRLCETTGESVQLYRREGTSRVCVAALEPPAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVGARLPMTAGSGAKVLLAH+D ATQ AVLP A F+ R LAEV RRGWAQSVAERE Sbjct 121 RDTVPVGARLPMTAGSGAKVLLAHSDPATQQAVLPTAKFTDRVLAEVRRRGWAQSVAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRDGRGVV+AAISVSGPIDR+GRRPG RWAADLL+AAD L RRL Sbjct 181 PGVASVSAPVRDGRGVVVAAISVSGPIDRIGRRPGARWAADLLAAADELARRL 233 >gi|120403126|ref|YP_952955.1| regulatory proteins IclR [Mycobacterium vanbaalenii PYR-1] gi|119955944|gb|ABM12949.1| transcriptional regulator, IclR family [Mycobacterium vanbaalenii PYR-1] Length=233 Score = 351 bits (901), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 189/233 (82%), Positives = 209/233 (90%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQ+SGIGVLDKAV VLHAVAESPCGLA+LC+RT+LPRATA+RLA LEVHRLL R DG Sbjct 1 MRQNSGIGVLDKAVTVLHAVAESPCGLADLCERTNLPRATAHRLAVGLEVHRLLAREGDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 WRLGPA+TELA HV+DPLL A A VLP+LR+ TGESVQ+YRREGT+R+C+AALEP AGL Sbjct 61 QWRLGPALTELAGHVNDPLLAAGAVVLPRLRELTGESVQLYRREGTTRICIAALEPPAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVG RLPMTAGSGAKVLLA+ DAATQ AVLP A F+ R LAEV RRGWAQS AERE Sbjct 121 RDTVPVGIRLPMTAGSGAKVLLAYADAATQQAVLPGAKFTDRTLAEVRRRGWAQSAAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRDGRG V+AA+SVSGPIDRMGRRPG RWAADL++AADALTRRL Sbjct 181 PGVASVSAPVRDGRGAVVAAVSVSGPIDRMGRRPGARWAADLVAAADALTRRL 233 >gi|169630376|ref|YP_001704025.1| IclR family transcriptional regulator [Mycobacterium abscessus ATCC 19977] gi|169242343|emb|CAM63371.1| Putative transcriptional regulator, IclR family [Mycobacterium abscessus] Length=233 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 179/233 (77%), Positives = 202/233 (87%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAV VL A+ +SPCGLAELC+RT LPRATA+RLAA LEVHRLL R DG Sbjct 1 MRQHSGIGVLDKAVQVLTAIGDSPCGLAELCERTGLPRATAHRLAAGLEVHRLLSRDGDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 W+LG +TELA HV+DPLL A A VLP+LR+ TGESVQ+YRREGT R+CVAALEP AGL Sbjct 61 QWQLGAGLTELAAHVNDPLLSASAQVLPKLREITGESVQLYRREGTVRICVAALEPPAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVG+RLPM+AGSGAKVLLAH+D TQAAVLP A F+ RALA+V +RGWAQS AERE Sbjct 121 RDTVPVGSRLPMSAGSGAKVLLAHSDPGTQAAVLPGATFTERALADVRKRGWAQSAAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 GVASVSAPVRD G VIAAISVSGPIDRMGRRPG RWAADL++A++A+T RL Sbjct 181 AGVASVSAPVRDRHGNVIAAISVSGPIDRMGRRPGARWAADLVAASEAITARL 233 >gi|294993924|ref|ZP_06799615.1| IclR family transcriptional regulator [Mycobacterium tuberculosis 210] Length=246 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 179/180 (99%), Positives = 180/180 (100%), Gaps = 0/180 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG Sbjct 1 MRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL Sbjct 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE Sbjct 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 >gi|145224807|ref|YP_001135485.1| regulatory protein IclR [Mycobacterium gilvum PYR-GCK] gi|145217293|gb|ABP46697.1| transcriptional regulator, IclR family [Mycobacterium gilvum PYR-GCK] Length=233 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 187/233 (81%), Positives = 205/233 (88%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQ+SGIGVLDKA+ VLHAVAESPCGLA+LC+RTDLPRATA+RLA LEVHRLL R DG Sbjct 1 MRQNSGIGVLDKAITVLHAVAESPCGLADLCERTDLPRATAHRLAVGLEVHRLLARDGDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 WRLGPA+TELA HV+D LL A A VLP+LR+ TGESVQ+YRREGTSR+CVAALEP AGL Sbjct 61 LWRLGPALTELAGHVNDSLLAAGAVVLPRLRELTGESVQLYRREGTSRICVAALEPPAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVG RL MTAGSGAKVLLA+ D TQ AVLP A F+ R LAEV +RGWAQS AERE Sbjct 121 RDTVPVGTRLSMTAGSGAKVLLAYADTHTQQAVLPNAKFTDRTLAEVRKRGWAQSAAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRDGRG VIAA+SVSGPIDRMGRRPG RWAADL++AADALTRRL Sbjct 181 PGVASVSAPVRDGRGAVIAAVSVSGPIDRMGRRPGARWAADLVAAADALTRRL 233 >gi|315445137|ref|YP_004078016.1| IclR family transcriptional regulator [Mycobacterium sp. Spyr1] gi|315263440|gb|ADU00182.1| transcriptional regulator, IclR family [Mycobacterium sp. Spyr1] Length=233 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 186/233 (80%), Positives = 205/233 (88%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQ+SGIGVLDKA+ V+HAVAESPCGLA+LC+RTDLPRATA+RLA LEVHRLL R DG Sbjct 1 MRQNSGIGVLDKAITVVHAVAESPCGLADLCERTDLPRATAHRLAVGLEVHRLLARDGDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 WRLGPA+TELA HV+D LL A A VLP+LR+ TGESVQ+YRREGTSR+CVAALEP AGL Sbjct 61 LWRLGPALTELAGHVNDSLLAAGAVVLPRLRELTGESVQLYRREGTSRICVAALEPPAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVG RL MTAGSGAKVLLA+ D TQ AVLP A F+ R LAEV +RGWAQS AERE Sbjct 121 RDTVPVGTRLSMTAGSGAKVLLAYADTHTQQAVLPNAKFTDRTLAEVRKRGWAQSAAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRDGRG VIAA+SVSGPIDRMGRRPG RWAADL++AADALTRRL Sbjct 181 PGVASVSAPVRDGRGAVIAAVSVSGPIDRMGRRPGARWAADLVAAADALTRRL 233 >gi|254819113|ref|ZP_05224114.1| hypothetical protein MintA_04260 [Mycobacterium intracellulare ATCC 13950] Length=220 Score = 340 bits (872), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 184/220 (84%), Positives = 199/220 (91%), Gaps = 0/220 (0%) Query 14 VGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRLGPAITELAT 73 +GVLH+VA+SPCGLAELC+RT LPRATAYRLAAALEVHRLL R +G WRLGPA+TELA Sbjct 1 MGVLHSVAQSPCGLAELCERTGLPRATAYRLAAALEVHRLLARDDEGRWRLGPAVTELAA 60 Query 74 HVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTVPVGARLPMT 133 HV+DPLL A +AVLP LR+ TGESVQ+YRREGT RVCVAALEPAAGLRDTVPVGARLPMT Sbjct 61 HVNDPLLAASSAVLPLLRETTGESVQLYRREGTDRVCVAALEPAAGLRDTVPVGARLPMT 120 Query 134 AGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVASVSAPVRDG 193 AGSGAKVLLAH+DAATQ AVL A F+ R LAEV RRGWAQSVAEREPGVASVSAPVRDG Sbjct 121 AGSGAKVLLAHSDAATQKAVLATAKFTERTLAEVRRRGWAQSVAEREPGVASVSAPVRDG 180 Query 194 RGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 RG V+AAISVSGPIDR+GRRPG RWAADLLSAADA+ RRL Sbjct 181 RGTVVAAISVSGPIDRIGRRPGARWAADLLSAADAMARRL 220 >gi|118467638|ref|YP_886726.1| IclR family transcriptional regulator [Mycobacterium smegmatis str. MC2 155] gi|118168925|gb|ABK69821.1| transcriptional regulator, IclR family protein [Mycobacterium smegmatis str. MC2 155] Length=233 Score = 340 bits (872), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 189/233 (82%), Positives = 204/233 (88%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +R SGIGVLDKAVGVLH VAESPCGLAELC+RT LPRATA+RLAA LE HRLL R DG Sbjct 1 MRNDSGIGVLDKAVGVLHTVAESPCGLAELCERTGLPRATAHRLAAGLETHRLLARDADG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 WRLGPA+TELA HV+DPLL A AAVLP+LR+ TGESVQ+YRREG SRVCV ALEP AGL Sbjct 61 RWRLGPALTELAAHVNDPLLSAGAAVLPRLREITGESVQLYRREGLSRVCVVALEPPAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVG +LPMTAGSGAKVLLA+ DAATQ AVLP A F+ R LAEV +RGWAQS AERE Sbjct 121 RDTVPVGTQLPMTAGSGAKVLLAYADAATQQAVLPSAKFTERTLAEVRKRGWAQSAAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PGVASVSAPVRD RG VIAA+SVSGPIDRMGRRPG RWAADLL+AA+ALTRRL Sbjct 181 PGVASVSAPVRDSRGQVIAAVSVSGPIDRMGRRPGARWAADLLAAAEALTRRL 233 >gi|108798888|ref|YP_639085.1| IclR family transcriptional regulator [Mycobacterium sp. MCS] gi|119868003|ref|YP_937955.1| regulatory proteins IclR [Mycobacterium sp. KMS] gi|126434488|ref|YP_001070179.1| regulatory proteins IclR [Mycobacterium sp. JLS] gi|108769307|gb|ABG08029.1| transcriptional regulator, IclR family [Mycobacterium sp. MCS] gi|119694092|gb|ABL91165.1| transcriptional regulator, IclR family [Mycobacterium sp. KMS] gi|126234288|gb|ABN97688.1| transcriptional regulator, IclR family [Mycobacterium sp. JLS] Length=233 Score = 337 bits (865), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 172/215 (80%), Positives = 188/215 (88%), Gaps = 0/215 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQ SGIGVLDKAVGVLH VAESPC LAELC+RT LPRATA+RLAA LE HRLL R DG Sbjct 1 MRQDSGIGVLDKAVGVLHTVAESPCALAELCERTGLPRATAHRLAAGLETHRLLARDADG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 WRLGPA+TELA V+DPLL A A +LP+LR+ TGESVQ+YRREGT+R+C+AALEP AGL Sbjct 61 RWRLGPALTELAGQVNDPLLTAGAVILPRLREITGESVQLYRREGTARICIAALEPPAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVG RLPMTAGSGAKVLLA+ D ATQ AVLP A+F+ R LAEV RRGWAQS AERE Sbjct 121 RDTVPVGTRLPMTAGSGAKVLLAYADPATQQAVLPDAMFTERTLAEVRRRGWAQSAAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPG 215 PGVASVSAPVRDGRG V+AAISVSGPIDRMGRRPG Sbjct 181 PGVASVSAPVRDGRGGVVAAISVSGPIDRMGRRPG 215 >gi|333991332|ref|YP_004523946.1| transcriptional regulator [Mycobacterium sp. JDM601] gi|333487300|gb|AEF36692.1| transcriptional regulatory protein [Mycobacterium sp. JDM601] Length=233 Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 169/216 (79%), Positives = 185/216 (86%), Gaps = 0/216 (0%) Query 3 QHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHW 62 QHSGIGVLDKA+ VLH VAESPCGLAELC+RT LPRATA+RLAA LE HRLLGR DG W Sbjct 3 QHSGIGVLDKALAVLHTVAESPCGLAELCERTGLPRATAHRLAAGLEAHRLLGRDDDGRW 62 Query 63 RLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRD 122 ++GPA++ELA DDPL A AAVLP+LR+ TGES Q+YRREG SRVCVAALEP AGLRD Sbjct 63 QIGPAVSELAARADDPLRTAGAAVLPRLREITGESAQLYRREGASRVCVAALEPPAGLRD 122 Query 123 TVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPG 182 TVPVGARLPMTAGSGAKVLLA D A Q VL +A F++R L+EV RRGWAQS+AEREPG Sbjct 123 TVPVGARLPMTAGSGAKVLLAFADPALQQEVLAQAKFTSRTLSEVRRRGWAQSIAEREPG 182 Query 183 VASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRW 218 VASVSAPVRD RG V+AAISVSGPIDRMGRRPG RW Sbjct 183 VASVSAPVRDRRGAVVAAISVSGPIDRMGRRPGARW 218 >gi|312140484|ref|YP_004007820.1| iclr family transcriptional regulator [Rhodococcus equi 103S] gi|325675898|ref|ZP_08155582.1| IclR family transcriptional regulator [Rhodococcus equi ATCC 33707] gi|311889823|emb|CBH49140.1| IclR family transcriptional regulator [Rhodococcus equi 103S] gi|325553869|gb|EGD23547.1| IclR family transcriptional regulator [Rhodococcus equi ATCC 33707] Length=233 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 172/233 (74%), Positives = 190/233 (82%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKA+GVLHAVAE PC L ELC+RT LPRATA+RLA LEVHRLL R DG Sbjct 1 MRQHSGIGVLDKAMGVLHAVAEQPCSLTELCNRTGLPRATAHRLAVGLEVHRLLTRDADG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 W GP + ELA D L+ A A VLP+LR+ TGESVQ+YRREGT RVC+A++EP AGL Sbjct 61 LWCTGPGLGELAATASDALVDAAALVLPRLREITGESVQLYRREGTHRVCIASMEPPAGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTV VGARLPMTAGSGAKVLLA DA TQ A+LP+A F R L EV RRGWAQS AERE Sbjct 121 RDTVLVGARLPMTAGSGAKVLLAWADAQTQRAILPEASFGERVLVEVRRRGWAQSAAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 GVASV+APVRD G V+AAISVSGPIDRMGRRPG RWAADLL+AADAL +RL Sbjct 181 SGVASVAAPVRDASGNVVAAISVSGPIDRMGRRPGARWAADLLAAADALHKRL 233 >gi|111023457|ref|YP_706429.1| transcriptional regulator [Rhodococcus jostii RHA1] gi|110822987|gb|ABG98271.1| transcriptional regulator [Rhodococcus jostii RHA1] Length=233 Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 160/215 (75%), Positives = 173/215 (81%), Gaps = 0/215 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAVGVLHAVAE PC L ELC RT LPRATA+RLA LEVHRLL R DG Sbjct 1 MRQHSGIGVLDKAVGVLHAVAEKPCSLTELCSRTGLPRATAHRLAVGLEVHRLLTRDSDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 W GP + ELA +DPL+ A A VLP+LR+ TGESVQ+YRREGT R+CVAA+EP GL Sbjct 61 LWCPGPGLAELAATANDPLVSAAALVLPRLREITGESVQLYRREGTQRICVAAMEPPTGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTV VGARLPM+AGSGAKVLLA D TQ A+LP A F R L EV RRGWAQS AERE Sbjct 121 RDTVLVGARLPMSAGSGAKVLLAWADPQTQRAILPDAAFGERVLLEVRRRGWAQSAAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPG 215 PGVASV+APVRD G VIAAISVSGPIDRMGRRPG Sbjct 181 PGVASVAAPVRDAGGAVIAAISVSGPIDRMGRRPG 215 >gi|226365958|ref|YP_002783741.1| IclR family transcriptional regulator [Rhodococcus opacus B4] gi|226244448|dbj|BAH54796.1| putative IclR family transcriptional regulator [Rhodococcus opacus B4] Length=233 Score = 304 bits (778), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 160/215 (75%), Positives = 172/215 (80%), Gaps = 0/215 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAVGVLHAVAE PC L ELC RT LPRATA+RLA LEVHRLL R DG Sbjct 1 MRQHSGIGVLDKAVGVLHAVAEKPCSLTELCSRTGLPRATAHRLAVGLEVHRLLTRDSDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 W GP + ELA +DPL+ A A VLP+LR+ TGESVQ+YRREGT R+CVAA+EP GL Sbjct 61 LWCPGPGLAELAATANDPLVSAAALVLPRLREITGESVQLYRREGTQRICVAAMEPPTGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTV VGARLPM+AGSGAKVLLA D TQ VLP A F R L EV RRGWAQS AERE Sbjct 121 RDTVLVGARLPMSAGSGAKVLLAWADPQTQRTVLPDAAFGERVLLEVRRRGWAQSAAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPG 215 PGVASV+APVRD G VIAAISVSGPIDRMGRRPG Sbjct 181 PGVASVAAPVRDSAGAVIAAISVSGPIDRMGRRPG 215 >gi|331695679|ref|YP_004331918.1| IclR family transcriptional regulator [Pseudonocardia dioxanivorans CB1190] gi|326950368|gb|AEA24065.1| transcriptional regulator, IclR family [Pseudonocardia dioxanivorans CB1190] Length=233 Score = 301 bits (772), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 159/218 (73%), Positives = 176/218 (81%), Gaps = 0/218 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQ SGIGVLDKAVGVL A A PCGL ELC+RT LPRATA+RLA LEVH LL RG DG Sbjct 1 MRQSSGIGVLDKAVGVLRAAAAEPCGLTELCERTGLPRATAHRLAVGLEVHGLLHRGADG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 WR GP + EL++ DPLL A AAVLP+LRD TGESVQ+YRR+GT R+CVA EPA+GL Sbjct 61 RWRPGPTLAELSSGHGDPLLDAAAAVLPRLRDITGESVQLYRRDGTHRICVATAEPASGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVPVG RL MTAGSGAKVL A D ATQ AVL A F+ R L +V RRGWAQS+AERE Sbjct 121 RDTVPVGTRLAMTAGSGAKVLAAWADPATQRAVLADATFTERVLVDVRRRGWAQSIAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRW 218 GVASVSAPVRDG G V+AA+SVSGPIDR+GRRPGVRW Sbjct 181 AGVASVSAPVRDGSGKVVAAVSVSGPIDRIGRRPGVRW 218 >gi|302524986|ref|ZP_07277328.1| transcriptional regulator [Streptomyces sp. AA4] gi|302433881|gb|EFL05697.1| transcriptional regulator [Streptomyces sp. AA4] Length=233 Score = 301 bits (771), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 155/216 (72%), Positives = 174/216 (81%), Gaps = 0/216 (0%) Query 3 QHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHW 62 QHSGIGVLDKAV VL AVAE PCGLAELC RT LPRATA+RLA LEVHRLL RG DG W Sbjct 3 QHSGIGVLDKAVAVLQAVAEDPCGLAELCTRTGLPRATAHRLAVGLEVHRLLRRGPDGRW 62 Query 63 RLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRD 122 R G A+ ELA DPLL A ++VLP+LRD TGESVQ+YRR+G RVCV+ EP +GLRD Sbjct 63 RPGTALAELAGGSTDPLLDAASSVLPKLRDITGESVQLYRRDGVQRVCVSTAEPPSGLRD 122 Query 123 TVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPG 182 TVP+G+RLPMTAGSGAKVL A +D TQ +L AV+ R L EV RRGWAQSVAEREPG Sbjct 123 TVPIGSRLPMTAGSGAKVLAAWSDPHTQRTILADAVYGERTLLEVRRRGWAQSVAEREPG 182 Query 183 VASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRW 218 VASVSAPVRD G V+AA+SVSGPI+R+GR+PG RW Sbjct 183 VASVSAPVRDSSGTVVAAVSVSGPIERIGRKPGARW 218 >gi|257054958|ref|YP_003132790.1| transcriptional regulator [Saccharomonospora viridis DSM 43017] gi|256584830|gb|ACU95963.1| transcriptional regulator [Saccharomonospora viridis DSM 43017] Length=220 Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 159/220 (73%), Positives = 175/220 (80%), Gaps = 0/220 (0%) Query 14 VGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRLGPAITELAT 73 + VLHAVAE PCGLAELC RT LPRATA+RLA LEVHR+L RG DG W GPA+ ELA Sbjct 1 MSVLHAVAEQPCGLAELCTRTGLPRATAHRLAVGLEVHRMLRRGPDGRWHPGPALAELAG 60 Query 74 HVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTVPVGARLPMT 133 DPLL A + VLP+LRD TGESVQ+YRR+G RVCVA EP +GLRDTVPVGARLPMT Sbjct 61 GTVDPLLDAASVVLPKLRDLTGESVQLYRRDGIVRVCVAVAEPPSGLRDTVPVGARLPMT 120 Query 134 AGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVASVSAPVRDG 193 AGSGAKVL A DA T+ A+L AVF R L EV RRGWAQSVAEREPGVASVSAPVRD Sbjct 121 AGSGAKVLAAWADAHTRQAILADAVFGERTLLEVRRRGWAQSVAEREPGVASVSAPVRDS 180 Query 194 RGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 G VIAA+SVSGP+DR+GRRPG +WA+DLL AA AL RL Sbjct 181 AGNVIAAVSVSGPVDRIGRRPGAKWASDLLQAASALQERL 220 >gi|226305894|ref|YP_002765854.1| IclR family transcriptional regulator [Rhodococcus erythropolis PR4] gi|226185011|dbj|BAH33115.1| putative IclR family transcriptional regulator [Rhodococcus erythropolis PR4] Length=233 Score = 298 bits (762), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 155/215 (73%), Positives = 169/215 (79%), Gaps = 0/215 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKA+GVLHAVAE PC L ELC RT LPRATA+RLA LEVHRLL R DG Sbjct 1 MRQHSGIGVLDKAMGVLHAVAEEPCSLTELCARTGLPRATAHRLAVGLEVHRLLTRDSDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 W GP + ELA +DPL+ A +LP+LR+ TGESVQ+YRREGT R+CVA++EP GL Sbjct 61 QWCPGPGLAELAATANDPLIAAAGLILPRLREITGESVQLYRREGTQRICVASMEPPTGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTV VGARLPM AGSGAKVLLA D TQ VL A F R L EV RRGWAQS AERE Sbjct 121 RDTVLVGARLPMNAGSGAKVLLAWADPQTQRTVLADASFGERVLLEVRRRGWAQSAAERE 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPG 215 PGVASV+APVRD G VIAAISVSGPIDRMGRRPG Sbjct 181 PGVASVAAPVRDSAGAVIAAISVSGPIDRMGRRPG 215 >gi|229493391|ref|ZP_04387180.1| transcriptional regulator [Rhodococcus erythropolis SK121] gi|229319707|gb|EEN85539.1| transcriptional regulator [Rhodococcus erythropolis SK121] Length=260 Score = 297 bits (761), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 155/215 (73%), Positives = 169/215 (79%), Gaps = 0/215 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKA+GVLHAVAE PC L ELC RT LPRATA+RLA LEVHRLL R DG Sbjct 28 MRQHSGIGVLDKAMGVLHAVAEEPCSLTELCARTGLPRATAHRLAVGLEVHRLLTRDSDG 87 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 W GP + ELA +DPL+ A +LP+LR+ TGESVQ+YRREGT R+CVA++EP GL Sbjct 88 QWCPGPGLAELAATANDPLIAAAGLILPRLREITGESVQLYRREGTQRICVASMEPPTGL 147 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTV VGARLPM AGSGAKVLLA D TQ VL A F R L EV RRGWAQS AERE Sbjct 148 RDTVLVGARLPMNAGSGAKVLLAWADPQTQRTVLADASFGERVLLEVRRRGWAQSAAERE 207 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPG 215 PGVASV+APVRD G VIAAISVSGPIDRMGRRPG Sbjct 208 PGVASVAAPVRDSAGAVIAAISVSGPIDRMGRRPG 242 >gi|256380000|ref|YP_003103660.1| IclR family transcriptional regulator [Actinosynnema mirum DSM 43827] gi|255924303|gb|ACU39814.1| transcriptional regulator, IclR family [Actinosynnema mirum DSM 43827] Length=233 Score = 295 bits (754), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 160/213 (76%), Positives = 175/213 (83%), Gaps = 0/213 (0%) Query 3 QHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHW 62 QHSGIGVLDKAV VL+AVA+ PCGLAELC+RT LPRATA+RLA LEVHRLL RG DG W Sbjct 3 QHSGIGVLDKAVAVLNAVAKDPCGLAELCNRTGLPRATAHRLAVGLEVHRLLRRGSDGRW 62 Query 63 RLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRD 122 R G A+ ELA DPLL A +VLP+LRD TGESVQ+YRR+G RVCV+A EP +GLRD Sbjct 63 RPGAALAELAGGATDPLLDAATSVLPRLRDITGESVQLYRRDGMQRVCVSAAEPPSGLRD 122 Query 123 TVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPG 182 TVPVGARLPMTAGSGAKVL A +D TQ A+L AV+ R L EV RRGWAQSVAEREPG Sbjct 123 TVPVGARLPMTAGSGAKVLAAWSDPGTQRAILADAVYGERTLLEVRRRGWAQSVAEREPG 182 Query 183 VASVSAPVRDGRGVVIAAISVSGPIDRMGRRPG 215 VASVSAPVRD G V+AAISVSGPIDRMGRRPG Sbjct 183 VASVSAPVRDSSGTVVAAISVSGPIDRMGRRPG 215 >gi|54026184|ref|YP_120426.1| putative transcriptional regulator [Nocardia farcinica IFM 10152] gi|54017692|dbj|BAD59062.1| putative transcriptional regulator [Nocardia farcinica IFM 10152] Length=233 Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 166/233 (72%), Positives = 190/233 (82%), Gaps = 0/233 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAV VLHAVAE PCGL ELC RT LPRATA+RLA LEVHRLL R +G Sbjct 1 MRQHSGIGVLDKAVAVLHAVAEQPCGLNELCARTGLPRATAHRLAVGLEVHRLLARDNNG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 WR GPA+ EL+T DPL A +LP+LR+ TGESVQ+Y R+GT+R+CVAA+EP +GL Sbjct 61 IWRPGPALAELSTGASDPLQEAAGLILPRLREITGESVQLYVRDGTARICVAAMEPPSGL 120 Query 121 RDTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAERE 180 RDTVP+GARLP+TAGS AKVL+A + Q VLP+AVF RALAEV RRGWAQS AER Sbjct 121 RDTVPIGARLPLTAGSAAKVLVAWAEPELQRTVLPEAVFGERALAEVRRRGWAQSAAERA 180 Query 181 PGVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 GVASVSAPVRD G V+AA+SVSGPIDRMGRRPG RWAADL++AADAL +RL Sbjct 181 AGVASVSAPVRDTAGAVVAAVSVSGPIDRMGRRPGARWAADLVAAADALHKRL 233 >gi|262203106|ref|YP_003274314.1| IclR family transcriptional regulator [Gordonia bronchialis DSM 43247] gi|262086453|gb|ACY22421.1| Transcriptional regulator IclR [Gordonia bronchialis DSM 43247] Length=244 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 159/229 (70%), Positives = 176/229 (77%), Gaps = 0/229 (0%) Query 5 SGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRL 64 SGIGVLDK+V VLHA+A +P L ELC T LPRATA+RLA LE HRLL R G W+ Sbjct 11 SGIGVLDKSVAVLHAIAAAPRNLTELCAHTGLPRATAHRLAVGLETHRLLARDATGRWQP 70 Query 65 GPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTV 124 GPA+ ELA DP+ A VLP+LRD TGESVQVYRREG RVCVAA+EP GLRDTV Sbjct 71 GPALGELAASAHDPVTEAALMVLPRLRDITGESVQVYRREGAERVCVAAMEPPTGLRDTV 130 Query 125 PVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVA 184 PVG R PM+AGS AKVLLA TD TQ A+L +VFS RAL E+ RRGWAQS ER GVA Sbjct 131 PVGTRFPMSAGSAAKVLLAWTDPPTQRALLHDSVFSERALHEIRRRGWAQSAGERAAGVA 190 Query 185 SVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 SVSAPVRD G V+AAISVSGPIDRMGRRPG RWAADLL+AADA+ +RL Sbjct 191 SVSAPVRDANGDVVAAISVSGPIDRMGRRPGARWAADLLAAADAIHKRL 239 >gi|300783644|ref|YP_003763935.1| IclR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|299793158|gb|ADJ43533.1| IclR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|340525034|gb|AEK40239.1| IclR family transcriptional regulator [Amycolatopsis mediterranei S699] Length=220 Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 143/205 (70%), Positives = 160/205 (79%), Gaps = 0/205 (0%) Query 14 VGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRLGPAITELAT 73 + VL AVA+ PCGLAELC RT LPRATA+RLA LEVHRLL RG DG WR G A+ ELA Sbjct 1 MAVLQAVADDPCGLAELCTRTGLPRATAHRLAVGLEVHRLLRRGPDGRWRPGTALAELAG 60 Query 74 HVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTVPVGARLPMT 133 DPLL A VLP+LRD TGESVQ+YRR+G RVCV+ EP +GLRDTVPVG+RLPMT Sbjct 61 GSTDPLLDAAGVVLPKLRDVTGESVQLYRRDGVQRVCVSTAEPPSGLRDTVPVGSRLPMT 120 Query 134 AGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVASVSAPVRDG 193 AGSGAKVL A D TQ +L AVF R L EV RRGWAQSVAEREPGVAS+SAPVRD Sbjct 121 AGSGAKVLAAWADPHTQRTILADAVFGERTLLEVRRRGWAQSVAEREPGVASISAPVRDS 180 Query 194 RGVVIAAISVSGPIDRMGRRPGVRW 218 G V+AA+SVSGPI+R+GR+PG RW Sbjct 181 AGTVVAAVSVSGPIERIGRKPGARW 205 >gi|343926841|ref|ZP_08766334.1| putative IclR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] gi|343763201|dbj|GAA13260.1| putative IclR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] Length=225 Score = 274 bits (701), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 151/220 (69%), Positives = 170/220 (78%), Gaps = 0/220 (0%) Query 14 VGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRLGPAITELAT 73 + VLHA+AE+PC L+ELC+RT LPRATA+RLA LE HR L R G W+ GPA+ ELA Sbjct 1 MAVLHAIAEAPCNLSELCERTGLPRATAHRLAVGLETHRFLARDISGRWQPGPALGELAA 60 Query 74 HVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTVPVGARLPMT 133 DP+ + VLP+LRD TGESVQVYRREG RVCVAA+EP GLRDTVPVG R PMT Sbjct 61 SAHDPVTESALMVLPRLRDITGESVQVYRREGAERVCVAAMEPPTGLRDTVPVGTRFPMT 120 Query 134 AGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVASVSAPVRDG 193 AGS AKVLLA D ATQ A+L +VF R L E+ RRGWAQS ER GVASVSAPVRDG Sbjct 121 AGSAAKVLLAWADPATQRALLHDSVFGERTLHEIRRRGWAQSAGERAAGVASVSAPVRDG 180 Query 194 RGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 G V+AAISVSGPIDRMGRRPG RWAADLL+AADA+ +RL Sbjct 181 NGDVVAAISVSGPIDRMGRRPGARWAADLLAAADAIHKRL 220 >gi|324998714|ref|ZP_08119826.1| transcriptional regulator [Pseudonocardia sp. P1] Length=226 Score = 274 bits (700), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 144/210 (69%), Positives = 165/210 (79%), Gaps = 0/210 (0%) Query 9 VLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRLGPAI 68 +LDKAVGVL A AE PCGLAELC+RT LPRATA+RLA LE H +L R DG W GP + Sbjct 1 MLDKAVGVLRATAEGPCGLAELCERTGLPRATAHRLAVGLEAHGMLLRTPDGRWHPGPTL 60 Query 69 TELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTVPVGA 128 +LA DPLL A AAVLP+LRD TGESVQ+YRR+G R+C+A EP +GLRDTVPVG+ Sbjct 61 GQLAGGRPDPLLDAAAAVLPRLRDITGESVQLYRRDGVHRICIAHAEPPSGLRDTVPVGS 120 Query 129 RLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVASVSA 188 RLPMTAGSGAKVL A D TQ +L +A FS R L +V RRGWAQSVAERE GVASVSA Sbjct 121 RLPMTAGSGAKVLAAWCDTPTQRHILSEATFSDRVLVDVRRRGWAQSVAEREAGVASVSA 180 Query 189 PVRDGRGVVIAAISVSGPIDRMGRRPGVRW 218 PVRD G V+AA+SVSGP++R+GRRPGVRW Sbjct 181 PVRDATGQVVAAVSVSGPVERIGRRPGVRW 210 >gi|296140543|ref|YP_003647786.1| IclR family transcriptional regulator [Tsukamurella paurometabola DSM 20162] gi|296028677|gb|ADG79447.1| transcriptional regulator, IclR family [Tsukamurella paurometabola DSM 20162] Length=241 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 157/229 (69%), Positives = 173/229 (76%), Gaps = 7/229 (3%) Query 5 SGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRL 64 SGIGVLDK+V VL A A P LA+LC RT LPRATA+RLA LE+H LL R DG WR Sbjct 20 SGIGVLDKSVAVLRAAAAEPASLADLCGRTGLPRATAHRLAVGLELHGLLSRDGDGLWRP 79 Query 65 GPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTV 124 G A+ ELA D L+ A A VLP+LR+ TGESVQ+YRREG RVCVAA EP +GLRDTV Sbjct 80 GTALRELAASTTDTLVDAAAMVLPRLREITGESVQLYRREGDHRVCVAAAEPPSGLRDTV 139 Query 125 PVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVA 184 PVG RLPMTAGSGAKVL A DA+ + FS R L++V +RGWAQS ERE GVA Sbjct 140 PVGTRLPMTAGSGAKVLTAWADASDTS-------FSDRTLSDVRKRGWAQSAGEREAGVA 192 Query 185 SVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 SVSAPVRD RG VIAAISVSGPIDRMGRRPG RWAADLL AA+AL RRL Sbjct 193 SVSAPVRDARGDVIAAISVSGPIDRMGRRPGARWAADLLQAAEALQRRL 241 >gi|291004732|ref|ZP_06562705.1| IclR family transcriptional regulator [Saccharopolyspora erythraea NRRL 2338] Length=220 Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 159/220 (73%), Positives = 173/220 (79%), Gaps = 0/220 (0%) Query 14 VGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRLGPAITELAT 73 + V+ AVA PCGLAELC RT LPRATA+RLA LEVHRLL RG DG WR G A+ ELA Sbjct 1 MAVMQAVASEPCGLAELCSRTGLPRATAHRLAVGLEVHRLLRRGSDGRWRPGAALAELAG 60 Query 74 HVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTVPVGARLPMT 133 DPLL A A VLP+LRD TGESVQ+YRR+G R+C+AA EP +GLRDTVPVG+ LPM Sbjct 61 GAVDPLLEAAAQVLPKLRDVTGESVQLYRRDGMQRLCIAAAEPPSGLRDTVPVGSALPMA 120 Query 134 AGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVASVSAPVRDG 193 AGSGAKVL A D ATQ AVL +AVF R L EV RRGWAQSVAERE GVASVSAPVRD Sbjct 121 AGSGAKVLAAWADPATQRAVLAEAVFGERTLMEVKRRGWAQSVAERESGVASVSAPVRDS 180 Query 194 RGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 G V+AAISVSGPIDRMGRRPG RWAADLL+AAD L RL Sbjct 181 GGNVVAAISVSGPIDRMGRRPGARWAADLLAAADGLQNRL 220 >gi|333920851|ref|YP_004494432.1| IclR family transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] gi|333483072|gb|AEF41632.1| IclR family transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] Length=220 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 154/220 (70%), Positives = 174/220 (80%), Gaps = 0/220 (0%) Query 14 VGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRLGPAITELAT 73 + VLHAVAE PC L+ LC+RT LPRATA+RLA LEVHRLL R G W G A+ ELA Sbjct 1 MAVLHAVAEEPCSLSTLCERTGLPRATAHRLAVGLEVHRLLARDTKGQWVPGAALAELAA 60 Query 74 HVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTVPVGARLPMT 133 D L+ A + VLP+LR+ TGESVQ+YRREG RVCVAA+EP GLRDTV VGARLPMT Sbjct 61 TAGDTLIDAASFVLPRLREITGESVQIYRREGIERVCVAAMEPPTGLRDTVLVGARLPMT 120 Query 134 AGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVASVSAPVRDG 193 AGSGAKVLLA D TQ AVLP+A F+ R L EV RRGWAQS+AERE GVASV+AP+RD Sbjct 121 AGSGAKVLLAWADITTQRAVLPEAQFTERVLIEVRRRGWAQSIAERESGVASVAAPIRDA 180 Query 194 RGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 G VIAAISVSGPIDRMGR+PG RWAADLL+AADA+ +RL Sbjct 181 TGTVIAAISVSGPIDRMGRKPGARWAADLLAAADAIQKRL 220 >gi|134102582|ref|YP_001108243.1| IclR family transcriptional regulator [Saccharopolyspora erythraea NRRL 2338] gi|133915205|emb|CAM05318.1| transcriptional regulator, IclR family [Saccharopolyspora erythraea NRRL 2338] Length=217 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 158/217 (73%), Positives = 171/217 (79%), Gaps = 0/217 (0%) Query 17 LHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRLGPAITELATHVD 76 + AVA PCGLAELC RT LPRATA+RLA LEVHRLL RG DG WR G A+ ELA Sbjct 1 MQAVASEPCGLAELCSRTGLPRATAHRLAVGLEVHRLLRRGSDGRWRPGAALAELAGGAV 60 Query 77 DPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTVPVGARLPMTAGS 136 DPLL A A VLP+LRD TGESVQ+YRR+G R+C+AA EP +GLRDTVPVG+ LPM AGS Sbjct 61 DPLLEAAAQVLPKLRDVTGESVQLYRRDGMQRLCIAAAEPPSGLRDTVPVGSALPMAAGS 120 Query 137 GAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVASVSAPVRDGRGV 196 GAKVL A D ATQ AVL +AVF R L EV RRGWAQSVAERE GVASVSAPVRD G Sbjct 121 GAKVLAAWADPATQRAVLAEAVFGERTLMEVKRRGWAQSVAERESGVASVSAPVRDSGGN 180 Query 197 VIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 V+AAISVSGPIDRMGRRPG RWAADLL+AAD L RL Sbjct 181 VVAAISVSGPIDRMGRRPGARWAADLLAAADGLQNRL 217 >gi|319951155|ref|ZP_08025000.1| IclR family transcriptional regulator [Dietzia cinnamea P4] gi|319435171|gb|EFV90446.1| IclR family transcriptional regulator [Dietzia cinnamea P4] Length=220 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 147/218 (68%), Positives = 174/218 (80%), Gaps = 0/218 (0%) Query 16 VLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRLGPAITELATHV 75 VLHAVAE PC LA+LC+RT LPRATA+RLA LE+H+LL R G W LGP + +LA HV Sbjct 3 VLHAVAEQPCVLADLCERTGLPRATAHRLAVGLEIHQLLSRDDAGVWSLGPGLAKLAAHV 62 Query 76 DDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTVPVGARLPMTAG 135 D L A ++VLP+LR+ T ESVQVYRR+G R+CVA+ EP GLRDTVPVGA LPM+ G Sbjct 63 SDSLADAASSVLPRLREITEESVQVYRRDGDRRICVASAEPPTGLRDTVPVGAVLPMSRG 122 Query 136 SGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVASVSAPVRDGRG 195 SGAKVL A D ATQ A+L A ++ R LAEV RRGWAQSVAERE GVAS+SAP+RD G Sbjct 123 SGAKVLAAWADPATQRALLSDATYTERQLAEVRRRGWAQSVAEREAGVASISAPIRDSTG 182 Query 196 VVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 V+AAISVSGP+DR+GRRPGV+WAADLL+AADA+ +RL Sbjct 183 TVVAAISVSGPVDRIGRRPGVKWAADLLAAADAIHKRL 220 >gi|326381555|ref|ZP_08203249.1| transcriptional regulator IclR [Gordonia neofelifaecis NRRL B-59395] gi|326199802|gb|EGD56982.1| transcriptional regulator IclR [Gordonia neofelifaecis NRRL B-59395] Length=231 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 137/225 (61%), Positives = 169/225 (76%), Gaps = 0/225 (0%) Query 9 VLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRLGPAI 68 +LDK+V +LH VA PC L ELCD T LPRATA+RLA LEVH+L+ R + G W GP + Sbjct 1 MLDKSVMILHTVARQPCNLGELCDVTGLPRATAHRLAVGLEVHQLVARDEAGRWIPGPTL 60 Query 69 TELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTVPVGA 128 LA D + A VLP+L+++TGESVQ+YRREG RVC+AA+EP GLRDTVP G Sbjct 61 GRLAATARDTVREAALMVLPRLQESTGESVQLYRREGADRVCIAAVEPPTGLRDTVPEGT 120 Query 129 RLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVASVSA 188 RLPM+AGS AKVL A +D T ++L A +S R+LAE+ RRGWAQSVAER GVAS+SA Sbjct 121 RLPMSAGSAAKVLAAWSDPDTLRSLLADAAYSERSLAEIRRRGWAQSVAERAAGVASISA 180 Query 189 PVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 PVRD G V+AA+SVSGP+DRMGRRPG R + DL++AADA++ RL Sbjct 181 PVRDASGAVVAAVSVSGPVDRMGRRPGDRLSTDLVAAADAISARL 225 >gi|258651709|ref|YP_003200865.1| IclR family transcriptional regulator [Nakamurella multipartita DSM 44233] gi|258554934|gb|ACV77876.1| transcriptional regulator, IclR family [Nakamurella multipartita DSM 44233] Length=237 Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 148/219 (68%), Positives = 166/219 (76%), Gaps = 0/219 (0%) Query 3 QHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHW 62 QHSGIGVLDKAV VL A A +P LAELC T LPRATA+RLA LEVH LL R G W Sbjct 3 QHSGIGVLDKAVAVLTAAAANPLTLAELCAVTGLPRATAHRLAVGLEVHGLLTRDAGGRW 62 Query 63 RLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRD 122 GP + LA DPL+ A A VLP+LRD TGESVQVYR +G SRVC+A EP +GLRD Sbjct 63 CQGPQLAVLAAGAPDPLVRASAGVLPELRDITGESVQVYRADGLSRVCIAVAEPTSGLRD 122 Query 123 TVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPG 182 TVP+GARLPMTAGSGA+VL A D A + AVL +A F+ R+L +V RRGWAQSVAERE G Sbjct 123 TVPLGARLPMTAGSGAQVLTAWADPAYRRAVLAQAGFTERSLDQVRRRGWAQSVAEREAG 182 Query 183 VASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAAD 221 VAS SAPVR G VIAA+SVSGP+DRMGR+PGVRWA D Sbjct 183 VASASAPVRSPAGEVIAAVSVSGPVDRMGRQPGVRWAQD 221 >gi|289763169|ref|ZP_06522547.1| hypothetical transcriptional regulatory protein [Mycobacterium tuberculosis GM 1503] gi|289710675|gb|EFD74691.1| hypothetical transcriptional regulatory protein [Mycobacterium tuberculosis GM 1503] Length=197 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 123/125 (99%), Positives = 124/125 (99%), Gaps = 0/125 (0%) Query 1 VRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDG 60 +RQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRL AALEVHRLLGRGQDG Sbjct 1 MRQHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLGAALEVHRLLGRGQDG 60 Query 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL Sbjct 61 HWRLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGL 120 Query 121 RDTVP 125 RDTVP Sbjct 121 RDTVP 125 >gi|330466237|ref|YP_004403980.1| IclR family transcriptional regulator [Verrucosispora maris AB-18-032] gi|328809208|gb|AEB43380.1| transcriptional regulator, iclr family protein [Verrucosispora maris AB-18-032] Length=228 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 136/226 (61%), Positives = 162/226 (72%), Gaps = 1/226 (0%) Query 5 SGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRL 64 SG+GVLDKAV +L A + LAEL +RT LPRATA+RLA ALE+HR+L R G WR Sbjct 2 SGVGVLDKAVVILAACVDG-ASLAELVERTKLPRATAHRLAQALEIHRMLVRDTQGRWRP 60 Query 65 GPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTV 124 GP + ELA D LL A +L LRDATGES Q+Y R R+CVAA E A+GLRDTV Sbjct 61 GPRLGELANAAPDVLLTAAEPLLAALRDATGESAQLYLRRADERICVAAAERASGLRDTV 120 Query 125 PVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVA 184 PVG+ LPMTAGS A++LLA +LP++ F+ R LAEV RRGWAQSVAEREPGVA Sbjct 121 PVGSVLPMTAGSAAQILLAWEPPEAVMPLLPRSKFTGRTLAEVRRRGWAQSVAEREPGVA 180 Query 185 SVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALT 230 SVSAP+RD G VIAAIS+SGPI+R+GRRPG R A ++ A L+ Sbjct 181 SVSAPIRDRTGRVIAAISISGPIERLGRRPGERHAMAVVRAGQRLS 226 >gi|145593808|ref|YP_001158105.1| regulatory protein IclR [Salinispora tropica CNB-440] gi|145303145|gb|ABP53727.1| regulatory protein, IclR [Salinispora tropica CNB-440] Length=228 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 137/226 (61%), Positives = 162/226 (72%), Gaps = 1/226 (0%) Query 5 SGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRL 64 SG+GVLDKAV +L A + LAEL +RT LPRATA+RLA ALE+HR+L R G WR Sbjct 2 SGVGVLDKAVVILAACVDG-ASLAELVERTKLPRATAHRLAQALEIHRMLVRDTQGRWRP 60 Query 65 GPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTV 124 GP + ELA D LL A +L LRDATGES Q+Y R RVCVAA E A+GLRDTV Sbjct 61 GPRLGELANAAPDVLLTAAEPLLCALRDATGESAQLYLRRADERVCVAAAERASGLRDTV 120 Query 125 PVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVA 184 PVG+ LPMTAGS A++LLA +LP++ F+ RALAEV RRGWAQSVAERE GVA Sbjct 121 PVGSVLPMTAGSAAQILLAWEPPEAVMPLLPRSKFTGRALAEVRRRGWAQSVAEREAGVA 180 Query 185 SVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALT 230 SVSAP+RD G VIAA+SVSGPI+R+GRRPG R A ++ A L+ Sbjct 181 SVSAPIRDRTGRVIAAVSVSGPIERIGRRPGERHAMAVVRAGQRLS 226 >gi|302865829|ref|YP_003834466.1| transcriptional regulator IclR [Micromonospora aurantiaca ATCC 27029] gi|315502374|ref|YP_004081261.1| IclR family transcriptional regulator [Micromonospora sp. L5] gi|302568688|gb|ADL44890.1| Transcriptional regulator IclR [Micromonospora aurantiaca ATCC 27029] gi|315408993|gb|ADU07110.1| transcriptional regulator, IclR family [Micromonospora sp. L5] Length=228 Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 135/226 (60%), Positives = 161/226 (72%), Gaps = 1/226 (0%) Query 5 SGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRL 64 SG+GVLDKAV +L A + LAEL +RT LPRATA+RLA ALE+HR+L R G WR Sbjct 2 SGVGVLDKAVVILAACVDG-ASLAELVERTKLPRATAHRLAQALEIHRMLVRDTQGRWRP 60 Query 65 GPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTV 124 GP + ELA D LL A +L LRDATGES Q+Y R R+CVAA E A+GLRDTV Sbjct 61 GPRLGELANAAPDVLLTAAEPLLAALRDATGESAQLYLRRADERICVAAAERASGLRDTV 120 Query 125 PVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVA 184 PVG+ LPMTAGS A++LLA +LP++ F+ R LAEV RRGWAQSVAERE GVA Sbjct 121 PVGSVLPMTAGSAAQILLAWEPPEAVMPLLPRSKFTGRTLAEVRRRGWAQSVAEREAGVA 180 Query 185 SVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALT 230 SVSAP+RD G VIAAIS+SGPI+R+GRRPG R A ++ A L+ Sbjct 181 SVSAPIRDRTGRVIAAISISGPIERLGRRPGERHAMAVVRAGQRLS 226 >gi|159036794|ref|YP_001536047.1| IclR family transcriptional regulator [Salinispora arenicola CNS-205] gi|157915629|gb|ABV97056.1| transcriptional regulator, IclR family [Salinispora arenicola CNS-205] Length=228 Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 135/226 (60%), Positives = 161/226 (72%), Gaps = 1/226 (0%) Query 5 SGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRL 64 SG+GVLDKAV +L A + LAEL +RT LPRATA+RLA ALE+HR+L R G WR Sbjct 2 SGVGVLDKAVVILAACVDG-ASLAELVERTKLPRATAHRLAQALEIHRMLVRDTQGRWRP 60 Query 65 GPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTV 124 GP + ELA D LL A +L LRDATGES Q+Y R R+CVAA E A+GLRDTV Sbjct 61 GPRLGELANAAPDVLLTAAEPLLSALRDATGESAQLYLRRADERICVAAAERASGLRDTV 120 Query 125 PVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVA 184 PVG+ LPMTAGS A++LLA +LP++ F+ R LAEV RRGWAQSVAERE GVA Sbjct 121 PVGSVLPMTAGSAAQILLAWEPPEAVMPLLPRSKFTGRNLAEVRRRGWAQSVAEREAGVA 180 Query 185 SVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALT 230 SVSAP+RD G VIAA+SVSGPI+R+GRRPG R A ++ A L+ Sbjct 181 SVSAPIRDRTGRVIAAVSVSGPIERLGRRPGERHAMAVVRAGQRLS 226 >gi|238063252|ref|ZP_04607961.1| IclR family transcriptional regulator [Micromonospora sp. ATCC 39149] gi|237885063|gb|EEP73891.1| IclR family transcriptional regulator [Micromonospora sp. ATCC 39149] Length=232 Score = 238 bits (607), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 134/226 (60%), Positives = 161/226 (72%), Gaps = 1/226 (0%) Query 5 SGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRL 64 SG+GVLDKAV +L A + LAEL +RT LPRATA+RLA ALE+HR+L R G WR Sbjct 6 SGVGVLDKAVVILAACVDG-ASLAELVERTKLPRATAHRLAQALEIHRMLVRDTQGRWRP 64 Query 65 GPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTV 124 GP + ELA D LL A +L LRDATGES Q+Y R R+CVAA E A+GLRDTV Sbjct 65 GPRLGELANAAPDVLLTAAEPLLAALRDATGESAQLYLRRADERICVAAAERASGLRDTV 124 Query 125 PVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVA 184 PVG+ LPMTAGS A++LLA +LP++ F+ R LAEV RRGWAQSVAERE GVA Sbjct 125 PVGSVLPMTAGSAAQILLAWEPPEAVMPLLPRSKFTGRTLAEVRRRGWAQSVAEREAGVA 184 Query 185 SVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALT 230 SVSAP+RD G VIAA+S+SGPI+R+GRRPG R A ++ A L+ Sbjct 185 SVSAPIRDRTGRVIAAVSISGPIERLGRRPGERHAMAVVRAGQRLS 230 >gi|213964619|ref|ZP_03392819.1| regulatory protein, IclR [Corynebacterium amycolatum SK46] gi|213952812|gb|EEB64194.1| regulatory protein, IclR [Corynebacterium amycolatum SK46] Length=241 Score = 235 bits (599), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 123/229 (54%), Positives = 164/229 (72%), Gaps = 0/229 (0%) Query 5 SGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRL 64 SGI VLD++V +L +VAE+P LAELC+ T LPRATA+RLA ALEVHRL+ R DG W Sbjct 13 SGIKVLDRSVLILKSVAETPRTLAELCEDTGLPRATAHRLATALEVHRLVTRTPDGRWTT 72 Query 65 GPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTV 124 GP +TE+ D L A A +LP+L +ATGESVQ+YR G +R C+A++EPA GLR+TV Sbjct 73 GPGLTEITPVTTDLLADAAAHILPKLVEATGESVQLYRLTGDTRTCIASMEPATGLRNTV 132 Query 125 PVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVA 184 PVG+R+P+TAGS A+VLLA A +LP A F+ + L + R GW++S+ ER+P +A Sbjct 133 PVGSRMPLTAGSAARVLLAFGPANLAERMLPDADFNQQDLDDCRRLGWSESMGERDPALA 192 Query 185 SVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 SVSAPV DG +IA +SVSGP++RM P W A +L+AA+ ++ RL Sbjct 193 SVSAPVFDGNQRMIAVLSVSGPVERMTPSPYKCWGAKVLAAAEEMSSRL 241 >gi|291302452|ref|YP_003513730.1| IclR family transcriptional regulator [Stackebrandtia nassauensis DSM 44728] gi|290571672|gb|ADD44637.1| transcriptional regulator, IclR family [Stackebrandtia nassauensis DSM 44728] Length=232 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 134/226 (60%), Positives = 159/226 (71%), Gaps = 1/226 (0%) Query 5 SGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHWRL 64 SG+GVLDKAV +L + AE LAEL D++ LPRATA+RLA ALE HR+L R + WR Sbjct 6 SGVGVLDKAVLILTSCAEG-ASLAELVDKSGLPRATAHRLAQALEAHRMLVRDHENRWRP 64 Query 65 GPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRDTV 124 GP + ELA D LL A +L LRD TGES Q+YRR R+C AA E +GLRDTV Sbjct 65 GPRLGELANTTPDVLLQAAEPILKLLRDQTGESAQLYRRRADERICCAAAERHSGLRDTV 124 Query 125 PVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPGVA 184 PVGA LPM+AGSGA+VLLA +LPK F+A+ L EV RRG+AQSVAERE GVA Sbjct 125 PVGAVLPMSAGSGAQVLLAWEPPEAVLPLLPKCRFTAQTLTEVRRRGYAQSVAEREAGVA 184 Query 185 SVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALT 230 SVSAPVRD G V+AAISVSGPI+R+GRRPG R A ++ A L+ Sbjct 185 SVSAPVRDRTGRVVAAISVSGPIERLGRRPGDRLAMAVIRAGQRLS 230 >gi|284992436|ref|YP_003410990.1| IclR family transcriptional regulator [Geodermatophilus obscurus DSM 43160] gi|284065681|gb|ADB76619.1| transcriptional regulator, IclR family [Geodermatophilus obscurus DSM 43160] Length=233 Score = 227 bits (579), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 133/229 (59%), Positives = 156/229 (69%), Gaps = 1/229 (0%) Query 3 QHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHW 62 Q + + VLDKAV +L AVA P LAEL +RT LPRATA+RLA ALE HRL+ R G W Sbjct 3 QPNPVAVLDKAVAILRAVAAEPATLAELVERTGLPRATAHRLAVALEGHRLVRRTPVGAW 62 Query 63 RLGPAITELATHVDDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLRD 122 GPA+ EL V D L L LRD +GES Q Y R+G SRVCVAA E A GLRD Sbjct 63 APGPALAELGRGVAD-LAELAGRHLVTLRDTSGESAQFYVRDGASRVCVAAAERAHGLRD 121 Query 123 TVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREPG 182 TVPVGARLP+TAGS A LLA A +LP A F+AR L +V RRGWA SVAEREPG Sbjct 122 TVPVGARLPLTAGSAAHALLAFAPADEVTPLLPSASFTARTLLDVRRRGWAHSVAEREPG 181 Query 183 VASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTR 231 VAS+SAPVRD G V+ A+S+SGP++R+GRRP +L AA A++R Sbjct 182 VASLSAPVRDAAGAVLGAVSISGPVERLGRRPAPEVVGAVLEAAGAISR 230 >gi|296270763|ref|YP_003653395.1| IclR family transcriptional regulator [Thermobispora bispora DSM 43833] gi|296093550|gb|ADG89502.1| transcriptional regulator, IclR family [Thermobispora bispora DSM 43833] Length=241 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 131/232 (57%), Positives = 158/232 (69%), Gaps = 1/232 (0%) Query 3 QHSGIGVLDKAVGVLHAVAESPCGLAELCDRTDLPRATAYRLAAALEVHRLLGRGQDGHW 62 SG+GVLDKAV VL+A+ P LA+L T L R TA+RLA ALE HR++ R G + Sbjct 3 NSSGVGVLDKAVLVLNALEAGPASLAQLVQATGLARPTAHRLAVALEHHRIVSRDSQGRF 62 Query 63 RLGPAITELATHV-DDPLLVACAAVLPQLRDATGESVQVYRREGTSRVCVAALEPAAGLR 121 LGP + EL++ +D LL VL QLRD TGES Q+YRR+G RVCVAA E +GLR Sbjct 63 ILGPRLAELSSAAGEDRLLAVATPVLTQLRDMTGESAQLYRRQGDERVCVAAAERTSGLR 122 Query 122 DTVPVGARLPMTAGSGAKVLLAHTDAATQAAVLPKAVFSARALAEVCRRGWAQSVAEREP 181 DTVPVGA LPMTAGS A+VLLA + L A F+A LA V RRGWA SV EREP Sbjct 123 DTVPVGAALPMTAGSAAQVLLAWEEPERLHRGLRGAKFTAATLASVRRRGWAHSVGEREP 182 Query 182 GVASVSAPVRDGRGVVIAAISVSGPIDRMGRRPGVRWAADLLSAADALTRRL 233 GVASVSAP+R G VIAAISVSGPI+R+ R PG +A +++AA+ +T L Sbjct 183 GVASVSAPIRGAGGKVIAAISVSGPIERLTRTPGRLFAKPVVAAAEKITEAL 234 Lambda K H 0.321 0.134 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 310059402884 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40