BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2991
Length=163
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610128|ref|NP_217507.1| hypothetical protein Rv2991 [Mycoba... 337 3e-91
gi|31794167|ref|NP_856660.1| hypothetical protein Mb3015 [Mycoba... 335 9e-91
gi|15842547|ref|NP_337584.1| hypothetical protein MT3069 [Mycoba... 334 2e-90
gi|58176567|pdb|1RFE|A Chain A, Crystal Structure Of Conserved H... 316 9e-85
gi|118617547|ref|YP_905879.1| hypothetical protein MUL_1960 [Myc... 309 1e-82
gi|240168949|ref|ZP_04747608.1| hypothetical protein MkanA1_0653... 305 2e-81
gi|296171282|ref|ZP_06852686.1| pyridoxamine 5'-phosphate oxidas... 292 1e-77
gi|333991333|ref|YP_004523947.1| hypothetical protein JDM601_269... 289 1e-76
gi|342858183|ref|ZP_08714838.1| pyridoxamine 5'-phosphate oxidas... 288 2e-76
gi|41409126|ref|NP_961962.1| hypothetical protein MAP3028 [Mycob... 287 3e-76
gi|254819114|ref|ZP_05224115.1| pyridoxamine 5'-phosphate oxidas... 286 5e-76
gi|118471734|ref|YP_884466.1| pyridoxamine 5'-phosphate oxidase ... 254 4e-66
gi|169630377|ref|YP_001704026.1| hypothetical protein MAB_3296 [... 246 1e-63
gi|312140485|ref|YP_004007821.1| pyridoxal 5'-phosphate synthase... 243 7e-63
gi|262203107|ref|YP_003274315.1| PPOX class F420-dependent enzym... 243 7e-63
gi|229493401|ref|ZP_04387190.1| ppox class probable f420-depende... 243 7e-63
gi|226365957|ref|YP_002783740.1| hypothetical protein ROP_65480 ... 240 5e-62
gi|111023456|ref|YP_706428.1| hypothetical protein RHA1_ro06497 ... 239 7e-62
gi|120401087|ref|YP_950916.1| pyridoxamine 5'-phosphate oxidase-... 239 7e-62
gi|343926842|ref|ZP_08766335.1| hypothetical protein GOALK_072_0... 239 1e-61
gi|226305893|ref|YP_002765853.1| hypothetical protein RER_24060 ... 239 1e-61
gi|108797032|ref|YP_637229.1| pyridoxamine 5'-phosphate oxidase-... 238 2e-61
gi|145221386|ref|YP_001132064.1| pyridoxamine 5'-phosphate oxida... 235 2e-60
gi|54026185|ref|YP_120427.1| hypothetical protein nfa42140 [Noca... 228 2e-58
gi|300785772|ref|YP_003766063.1| pyridoxamine 5'-phosphate oxida... 228 3e-58
gi|312195256|ref|YP_004015317.1| F420-dependent enzyme [Frankia ... 223 8e-57
gi|326381554|ref|ZP_08203248.1| PPOX class putative F420-depende... 222 2e-56
gi|302526919|ref|ZP_07279261.1| pyridoxamine 5'-phosphate oxidas... 217 4e-55
gi|296141486|ref|YP_003648729.1| PPOX class F420-dependent enzym... 214 4e-54
gi|288921217|ref|ZP_06415502.1| pyridoxamine 5'-phosphate oxidas... 207 6e-52
gi|119717036|ref|YP_924001.1| pyridoxamine 5'-phosphate oxidase-... 196 1e-48
gi|302531115|ref|ZP_07283457.1| predicted protein [Streptomyces ... 119 1e-25
gi|284047222|ref|YP_003397562.1| pyridoxamine 5'-phosphate oxida... 116 1e-24
gi|326331728|ref|ZP_08198016.1| PPOX class probable F420-depende... 116 1e-24
gi|271969448|ref|YP_003343644.1| hypothetical protein Sros_8252 ... 115 2e-24
gi|257057766|ref|YP_003135598.1| Pyridoxamine 5'-phosphate oxida... 113 1e-23
gi|256372547|ref|YP_003110371.1| pyridoxamine 5'-phosphate oxida... 112 2e-23
gi|269125323|ref|YP_003298693.1| pyridoxamine 5'-phosphate oxida... 112 2e-23
gi|256391375|ref|YP_003112939.1| pyridoxamine 5'-phosphate oxida... 110 5e-23
gi|159038402|ref|YP_001537655.1| pyridoxamine 5'-phosphate oxida... 103 1e-20
gi|145595157|ref|YP_001159454.1| pyridoxamine 5'-phosphate oxida... 92.8 1e-17
gi|254385911|ref|ZP_05001229.1| conserved hypothetical protein [... 85.1 3e-15
gi|324999535|ref|ZP_08120647.1| pyridoxamine 5'-phosphate oxidas... 84.3 5e-15
gi|294628213|ref|ZP_06706773.1| PPOX class F420-dependent enzyme... 84.0 7e-15
gi|297198178|ref|ZP_06915575.1| conserved hypothetical protein [... 84.0 7e-15
gi|302549998|ref|ZP_07302340.1| conserved hypothetical protein [... 83.2 1e-14
gi|288917848|ref|ZP_06412209.1| pyridoxamine 5'-phosphate oxidas... 83.2 1e-14
gi|297195642|ref|ZP_06913040.1| conserved hypothetical protein [... 82.8 1e-14
gi|291440917|ref|ZP_06580307.1| conserved hypothetical protein [... 81.6 3e-14
gi|329941497|ref|ZP_08290762.1| hypothetical protein SGM_6254 [S... 80.9 5e-14
>gi|15610128|ref|NP_217507.1| hypothetical protein Rv2991 [Mycobacterium tuberculosis H37Rv]
gi|148662841|ref|YP_001284364.1| hypothetical protein MRA_3020 [Mycobacterium tuberculosis H37Ra]
gi|148824181|ref|YP_001288935.1| hypothetical protein TBFG_13006 [Mycobacterium tuberculosis F11]
66 more sequence titles
Length=163
Score = 337 bits (865), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ
Sbjct 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE
Sbjct 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP
Sbjct 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
>gi|31794167|ref|NP_856660.1| hypothetical protein Mb3015 [Mycobacterium bovis AF2122/97]
gi|121638872|ref|YP_979096.1| hypothetical protein BCG_3012 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991364|ref|YP_002646053.1| hypothetical protein JTY_3007 [Mycobacterium bovis BCG str. Tokyo
172]
8 more sequence titles
Length=163
Score = 335 bits (860), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 162/163 (99%), Positives = 162/163 (99%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ
Sbjct 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGV EIVEEPEALHRVGVSVWERYTGPYTDE
Sbjct 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVTEIVEEPEALHRVGVSVWERYTGPYTDE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP
Sbjct 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
>gi|15842547|ref|NP_337584.1| hypothetical protein MT3069 [Mycobacterium tuberculosis CDC1551]
gi|13882858|gb|AAK47398.1| hypothetical protein MT3069 [Mycobacterium tuberculosis CDC1551]
gi|323718370|gb|EGB27544.1| hypothetical protein TMMG_03517 [Mycobacterium tuberculosis CDC1551A]
Length=163
Score = 334 bits (857), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/163 (99%), Positives = 162/163 (99%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
M TKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ
Sbjct 1 MVTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE
Sbjct 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP
Sbjct 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
>gi|58176567|pdb|1RFE|A Chain A, Crystal Structure Of Conserved Hypothetical Protein
Rv2991 From Mycobacterium Tuberculosis
Length=162
Score = 316 bits (809), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 155/162 (96%), Positives = 155/162 (96%), Gaps = 0/162 (0%)
Query 2 GTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQK 61
GTKQRADIV SEAEIADFVNSSRTGTLATIGPDGQPHLTA WYAVIDGEIWLETKAKSQK
Sbjct 1 GTKQRADIVXSEAEIADFVNSSRTGTLATIGPDGQPHLTAXWYAVIDGEIWLETKAKSQK 60
Query 62 AVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDEC 121
AVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE
Sbjct 61 AVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDEX 120
Query 122 KPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
KP VDQ NKRVGVRIVARRTRSWDHRKLGLPH SVGGSTAP
Sbjct 121 KPXVDQXXNKRVGVRIVARRTRSWDHRKLGLPHXSVGGSTAP 162
>gi|118617547|ref|YP_905879.1| hypothetical protein MUL_1960 [Mycobacterium ulcerans Agy99]
gi|183981733|ref|YP_001850024.1| hypothetical protein MMAR_1720 [Mycobacterium marinum M]
gi|118569657|gb|ABL04408.1| conserved protein [Mycobacterium ulcerans Agy99]
gi|183175059|gb|ACC40169.1| conserved protein [Mycobacterium marinum M]
Length=173
Score = 309 bits (791), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/163 (90%), Positives = 158/163 (97%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGTKQRADIVMSEAEIA+FV +SRTGTLATIGP+GQPHLTAMWYAV+DGEIWLETKAKSQ
Sbjct 1 MGTKQRADIVMSEAEIANFVTTSRTGTLATIGPNGQPHLTAMWYAVVDGEIWLETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNL+RDPRVSFLLEDG+TYDTLRGVSFEGVAEI+++PEALHRVGVSVWERYTGPYTD+
Sbjct 61 KAVNLKRDPRVSFLLEDGNTYDTLRGVSFEGVAEIIDDPEALHRVGVSVWERYTGPYTDD 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
KPMVDQMMNKRVGVRI++ RTRSWDHRKLGLP M VGGSTAP
Sbjct 121 VKPMVDQMMNKRVGVRILSHRTRSWDHRKLGLPPMPVGGSTAP 163
>gi|240168949|ref|ZP_04747608.1| hypothetical protein MkanA1_06530 [Mycobacterium kansasii ATCC
12478]
Length=170
Score = 305 bits (780), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/163 (89%), Positives = 155/163 (96%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG+ QRA IVM+E EIADFVN SRTGTLATIGPDGQPHLTAMWYAV+DGEIWLETKAKSQ
Sbjct 1 MGSNQRAQIVMTEEEIADFVNKSRTGTLATIGPDGQPHLTAMWYAVVDGEIWLETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNL+RDPRVSFLLEDG+TYDTLRGVSFEGVAEI++EP+AL RVGVSVWERYTGPY+DE
Sbjct 61 KAVNLKRDPRVSFLLEDGNTYDTLRGVSFEGVAEIIDEPDALFRVGVSVWERYTGPYSDE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
+PMVDQMMNKRVGVRIV+ RTRSWDHRKLGLPHM VGGSTAP
Sbjct 121 LRPMVDQMMNKRVGVRIVSCRTRSWDHRKLGLPHMPVGGSTAP 163
>gi|296171282|ref|ZP_06852686.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894250|gb|EFG74007.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=170
Score = 292 bits (748), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/163 (87%), Positives = 149/163 (92%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGT QRA IVMS EIADFV SRTGTLATIGPDGQPHLTAMWYAV+DGEIWLETKAKSQ
Sbjct 1 MGTNQRASIVMSADEIADFVVKSRTGTLATIGPDGQPHLTAMWYAVVDGEIWLETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNL+RDPRVSFL+EDGDTYDTLRGVSFEGVAEIV++PE HRVGVSV+ERYTGPYTDE
Sbjct 61 KAVNLKRDPRVSFLIEDGDTYDTLRGVSFEGVAEIVDDPEVSHRVGVSVFERYTGPYTDE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
KP V+QMMNKRV VRIVA+R RSWDHRKLGLP M VGGSTAP
Sbjct 121 MKPFVEQMMNKRVCVRIVAQRARSWDHRKLGLPAMPVGGSTAP 163
>gi|333991333|ref|YP_004523947.1| hypothetical protein JDM601_2693 [Mycobacterium sp. JDM601]
gi|333487301|gb|AEF36693.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=166
Score = 289 bits (739), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/163 (86%), Positives = 147/163 (91%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGTKQRA IVM++AE+ADFV S RTGTLATIGPDGQPHLTAMWYAV+DGEIWLETKAKSQ
Sbjct 1 MGTKQRAQIVMTDAEVADFVTSHRTGTLATIGPDGQPHLTAMWYAVLDGEIWLETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRDPRVSFLLE G TYDTLRGVSFEGVAEIV++P+ L RVGVSVWERYTGPYTDE
Sbjct 61 KAVNLRRDPRVSFLLEAGQTYDTLRGVSFEGVAEIVDDPDTLFRVGVSVWERYTGPYTDE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
KP VD MMN RV VRIV RRTRSWDHRKLGLP M + GSTAP
Sbjct 121 MKPGVDAMMNNRVAVRIVTRRTRSWDHRKLGLPAMPLAGSTAP 163
>gi|342858183|ref|ZP_08714838.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium colombiense
CECT 3035]
gi|342133887|gb|EGT87067.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium colombiense
CECT 3035]
Length=170
Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/163 (85%), Positives = 148/163 (91%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGT QRA IVMSE E+ADFV SRTGTLATIG DGQPHLTAMWYAV+DGEIWLETKAKSQ
Sbjct 1 MGTNQRASIVMSEDEVADFVVKSRTGTLATIGADGQPHLTAMWYAVVDGEIWLETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNL+RDPRVSFL+EDG TYDTLRGVSFEGVAEIV++P+ HRVGVSVWERYTGPY+D+
Sbjct 61 KAVNLKRDPRVSFLIEDGHTYDTLRGVSFEGVAEIVDDPDVSHRVGVSVWERYTGPYSDD 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
KP V+QMMNKRV VRIVARR RSWDHRKLGLP M VGGSTAP
Sbjct 121 MKPFVEQMMNKRVCVRIVARRARSWDHRKLGLPAMPVGGSTAP 163
>gi|41409126|ref|NP_961962.1| hypothetical protein MAP3028 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118466402|ref|YP_883007.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium avium 104]
gi|254776263|ref|ZP_05217779.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
avium subsp. avium ATCC 25291]
gi|41397946|gb|AAS05576.1| hypothetical protein MAP_3028 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118167689|gb|ABK68586.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
avium 104]
gi|336459114|gb|EGO38062.1| PPOX class probable enzyme [Mycobacterium avium subsp. paratuberculosis
S397]
Length=170
Score = 287 bits (735), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/163 (85%), Positives = 149/163 (92%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGT QRA IVMS+ EIADFV SRTGTLATIG DGQPHLTAMWYAV+DGEIWLETKAKSQ
Sbjct 1 MGTNQRASIVMSDDEIADFVVKSRTGTLATIGRDGQPHLTAMWYAVVDGEIWLETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KA+NL+RDPRVSFL+EDGDTYDTLRGVSFEGVAE+V++P+ HRVGVSV+ERYTGPYTDE
Sbjct 61 KAINLKRDPRVSFLIEDGDTYDTLRGVSFEGVAELVDDPDVAHRVGVSVFERYTGPYTDE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
KP V+QMMNKRV VRIVARR RSWDHRKLGLP M VGGSTAP
Sbjct 121 MKPFVEQMMNKRVCVRIVARRARSWDHRKLGLPPMPVGGSTAP 163
>gi|254819114|ref|ZP_05224115.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
intracellulare ATCC 13950]
Length=170
Score = 286 bits (733), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 138/163 (85%), Positives = 148/163 (91%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGT QRA IVMSE EIADFV SRTGTLAT+GPDGQPHLTAMWYAV+DGEIWLETKAKSQ
Sbjct 1 MGTNQRASIVMSEDEIADFVVKSRTGTLATVGPDGQPHLTAMWYAVVDGEIWLETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNL+RDPRVSFL+EDG TYDTLRGVSFEGVAEIV++P+ HRVGVSVWERYTGPYT++
Sbjct 61 KAVNLKRDPRVSFLIEDGHTYDTLRGVSFEGVAEIVDDPDVSHRVGVSVWERYTGPYTED 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
KP V+QMMNKRV VRIVARR RSWDHRKLGL M VGGSTAP
Sbjct 121 MKPFVEQMMNKRVCVRIVARRARSWDHRKLGLAPMPVGGSTAP 163
>gi|118471734|ref|YP_884466.1| pyridoxamine 5'-phosphate oxidase [Mycobacterium smegmatis str.
MC2 155]
gi|118173021|gb|ABK73917.1| pyridoxamine 5'-phosphate oxidase family protein [Mycobacterium
smegmatis str. MC2 155]
Length=167
Score = 254 bits (648), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 118/162 (73%), Positives = 136/162 (84%), Gaps = 0/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG +R IVMS+ EIA+FV SRT T+AT+ PDG+PHL AMWYAV+DGEIW ETKAKSQ
Sbjct 1 MGKNERTKIVMSDEEIAEFVERSRTATMATVLPDGRPHLVAMWYAVVDGEIWFETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRDP V+ L+EDG TYDTLRGVS +G AEIV++PE L RVG+SVWERYTGPYTDE
Sbjct 61 KAVNLRRDPTVTVLIEDGHTYDTLRGVSIDGTAEIVDDPETLLRVGISVWERYTGPYTDE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
+P VDQMMN R+ VR+V RTRSWDHRKLG+P M +GGSTA
Sbjct 121 MRPFVDQMMNNRIAVRVVPGRTRSWDHRKLGMPAMPLGGSTA 162
>gi|169630377|ref|YP_001704026.1| hypothetical protein MAB_3296 [Mycobacterium abscessus ATCC 19977]
gi|169242344|emb|CAM63372.1| Conserved hypothetical protein (pyridoxamine 5'-phosphate oxidase-related
[Mycobacterium abscessus]
Length=165
Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 110/163 (68%), Positives = 137/163 (85%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG+ QR+ IVMS+ EI +F+N+SRT T+AT+G DGQPHL AMWYAV++GE+W ETKAKSQ
Sbjct 1 MGSNQRSQIVMSDEEITEFINNSRTTTMATVGADGQPHLVAMWYAVLNGEVWFETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
K VNL+R+P ++ L+EDG TYDTLRGVS EG AEIVE+P+ L +VG+SV+ERYT PYT+E
Sbjct 61 KVVNLKRNPTITCLIEDGLTYDTLRGVSIEGRAEIVEDPDVLFQVGISVFERYTAPYTEE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
KP V+QM+NKR+ VR+ R RSWDHRKLGLP M +GGSTAP
Sbjct 121 MKPFVEQMLNKRIAVRVRPTRVRSWDHRKLGLPAMPLGGSTAP 163
>gi|312140485|ref|YP_004007821.1| pyridoxal 5'-phosphate synthase [Rhodococcus equi 103S]
gi|325675897|ref|ZP_08155581.1| pyridoxamine 5'-phosphate oxidase family protein [Rhodococcus
equi ATCC 33707]
gi|311889824|emb|CBH49141.1| putative pyridoxal 5'-phosphate synthase [Rhodococcus equi 103S]
gi|325553868|gb|EGD23546.1| pyridoxamine 5'-phosphate oxidase family protein [Rhodococcus
equi ATCC 33707]
Length=165
Score = 243 bits (620), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 111/162 (69%), Positives = 134/162 (83%), Gaps = 0/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGT QR I MS+AEI +FV SR T+ATIG +G PHL AMWYAVIDGE+W ETKAKSQ
Sbjct 1 MGTNQRGQITMSDAEITEFVERSRVSTMATIGVNGTPHLVAMWYAVIDGELWFETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRD R++ ++EDGDTYDTLRGVS EG EIV++PEAL +VG+S+WERYTGPY+++
Sbjct 61 KAVNLRRDDRLTMMIEDGDTYDTLRGVSIEGRGEIVDDPEALFKVGISIWERYTGPYSED 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
KP V+ M++KR+ V++V R RSWDHRKLGLP M VGGSTA
Sbjct 121 VKPAVEMMLHKRIAVKVVPERVRSWDHRKLGLPEMPVGGSTA 162
>gi|262203107|ref|YP_003274315.1| PPOX class F420-dependent enzyme [Gordonia bronchialis DSM 43247]
gi|262086454|gb|ACY22422.1| PPOX class putative F420-dependent enzyme [Gordonia bronchialis
DSM 43247]
Length=166
Score = 243 bits (620), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 114/162 (71%), Positives = 132/162 (82%), Gaps = 0/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG QR+ IVMSEAEI +FV SRT TLAT G DG HL AMWY +IDGEIW ETKAKSQ
Sbjct 1 MGVNQRSQIVMSEAEITEFVERSRTATLATTGRDGGIHLVAMWYGIIDGEIWFETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRR+ R S L+EDGDTYDTLRGV+ EG AEI+++P++ +VG+SVWERYT PYT+E
Sbjct 61 KAVNLRRNARCSILIEDGDTYDTLRGVAIEGTAEILDDPDSCLKVGISVWERYTAPYTEE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
KP V+QMM+KRV VR+V RTRSWDHRKLG+P M V GSTA
Sbjct 121 SKPFVEQMMHKRVAVRVVPSRTRSWDHRKLGIPEMPVAGSTA 162
>gi|229493401|ref|ZP_04387190.1| ppox class probable f420-dependent enzyme [Rhodococcus erythropolis
SK121]
gi|229319717|gb|EEN85549.1| ppox class probable f420-dependent enzyme [Rhodococcus erythropolis
SK121]
Length=167
Score = 243 bits (620), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 113/163 (70%), Positives = 131/163 (81%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
M KQR+ I M+EAEI+ FV SRT T+AT+ DG PHL AMW+A++DGEIW ETKAKSQ
Sbjct 1 MAGKQRSQITMTEAEISSFVEKSRTATMATLSADGMPHLIAMWFAIVDGEIWFETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRD R+S L+EDG TYDTLRGVS EG IVE+PEAL VG+SVWERYTGPYTD+
Sbjct 61 KAVNLRRDARMSVLIEDGQTYDTLRGVSMEGTGVIVEDPEALFAVGISVWERYTGPYTDD 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
+P VD M++KRV VR V RTRSWDHRKLG+P M + GSTAP
Sbjct 121 LRPAVDAMLHKRVAVRFVPDRTRSWDHRKLGMPAMPLSGSTAP 163
>gi|226365957|ref|YP_002783740.1| hypothetical protein ROP_65480 [Rhodococcus opacus B4]
gi|226244447|dbj|BAH54795.1| hypothetical protein [Rhodococcus opacus B4]
Length=172
Score = 240 bits (613), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 112/162 (70%), Positives = 134/162 (83%), Gaps = 0/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG QR+ I M+++EIA+FVN SR TLAT+ DG+ HL AMWYAVIDG+IW ETK+KSQ
Sbjct 1 MGKNQRSQITMTDSEIAEFVNRSRIATLATVAADGRAHLVAMWYAVIDGDIWFETKSKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRD RV+ L+EDG TYDTLRG+S EG AEIVE+P+A+ VGVSVWERYTGPYTD+
Sbjct 61 KAVNLRRDDRVTVLIEDGQTYDTLRGMSIEGRAEIVEDPDAMFAVGVSVWERYTGPYTDD 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
+P +DQ+++KRV VRIV R RSWDH KLGLP M VGG+TA
Sbjct 121 LRPAIDQLLHKRVVVRIVPERIRSWDHAKLGLPAMPVGGTTA 162
>gi|111023456|ref|YP_706428.1| hypothetical protein RHA1_ro06497 [Rhodococcus jostii RHA1]
gi|110822986|gb|ABG98270.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=172
Score = 239 bits (611), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 112/162 (70%), Positives = 134/162 (83%), Gaps = 0/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG QR+ I M+++EIA+FV+ SR TLAT+ DG+ HL AMWYAVIDGEIW ETK+KSQ
Sbjct 1 MGKNQRSQITMTDSEIAEFVDRSRIATLATVAADGRSHLVAMWYAVIDGEIWFETKSKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRD RV+ L+EDG TYDTLRG+S EG AEIVE+P+A+ VGVSVWERYTGPYTD+
Sbjct 61 KAVNLRRDDRVTVLIEDGQTYDTLRGISVEGRAEIVEDPDAMFAVGVSVWERYTGPYTDD 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
+P +DQ+++KRV VRIV R RSWDH KLGLP M VGG+TA
Sbjct 121 LRPAIDQLLHKRVVVRIVPERIRSWDHAKLGLPAMPVGGTTA 162
>gi|120401087|ref|YP_950916.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
vanbaalenii PYR-1]
gi|119953905|gb|ABM10910.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium vanbaalenii PYR-1]
Length=165
Score = 239 bits (611), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 110/162 (68%), Positives = 133/162 (83%), Gaps = 0/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG +RA IVMS+ EIA+F+ SRT T+AT+ P+G+PHL AMWYAV+DGEIW ETKAKSQ
Sbjct 1 MGKNERAKIVMSDGEIAEFIERSRTATMATVLPNGRPHLVAMWYAVLDGEIWFETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRDP ++ ++EDG +YDTLRGVS +G AEI ++PE RVG+SVWERYTGPYTDE
Sbjct 61 KAVNLRRDPTITVMIEDGLSYDTLRGVSIDGQAEIYDDPETSLRVGISVWERYTGPYTDE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
+P VDQMMN R+ VR+V RTRSWDHRKLG+ M + GSTA
Sbjct 121 MRPFVDQMMNNRICVRVVPSRTRSWDHRKLGMQGMPISGSTA 162
>gi|343926842|ref|ZP_08766335.1| hypothetical protein GOALK_072_00640 [Gordonia alkanivorans NBRC
16433]
gi|343763202|dbj|GAA13261.1| hypothetical protein GOALK_072_00640 [Gordonia alkanivorans NBRC
16433]
Length=165
Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/162 (69%), Positives = 130/162 (81%), Gaps = 0/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG QR IVMS+AEI DFV SRT TLAT GPDG HL AMWY VIDGEIW ETK KSQ
Sbjct 1 MGVNQRNQIVMSDAEIEDFVARSRTATLATTGPDGGIHLVAMWYGVIDGEIWFETKFKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRR+ R + ++EDGDTYDTLRGVSFEG AEI+++P++ ++G+SVWERYT PYT+E
Sbjct 61 KAVNLRRNNRCTVMIEDGDTYDTLRGVSFEGTAEILDDPDSCLKIGISVWERYTAPYTEE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
+P V+QMM+KRV VR+V R RSWDHRKLG+P M GSTA
Sbjct 121 SRPFVEQMMHKRVAVRLVPSRVRSWDHRKLGIPEMPASGSTA 162
>gi|226305893|ref|YP_002765853.1| hypothetical protein RER_24060 [Rhodococcus erythropolis PR4]
gi|226185010|dbj|BAH33114.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=165
Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/163 (69%), Positives = 131/163 (81%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
M KQR+ I M+EAEI+ FV SRT T+AT+ DG PHL AMW+A++DGEIW ETKAKSQ
Sbjct 1 MAGKQRSQITMTEAEISSFVEKSRTATMATLSADGMPHLIAMWFAIVDGEIWFETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRD R+S L+EDG TYDTLRGVS EG IVE+PEAL VG+SVWERYTGPYT++
Sbjct 61 KAVNLRRDTRMSVLIEDGLTYDTLRGVSMEGTGVIVEDPEALFAVGISVWERYTGPYTED 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
+P V+ M++KRV VR V RTRSWDHRKLG+P M + GSTAP
Sbjct 121 LRPAVEAMLHKRVAVRFVPDRTRSWDHRKLGMPAMPLSGSTAP 163
>gi|108797032|ref|YP_637229.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
sp. MCS]
gi|119866117|ref|YP_936069.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
sp. KMS]
gi|126432654|ref|YP_001068345.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
sp. JLS]
gi|108767451|gb|ABG06173.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium sp. MCS]
gi|119692206|gb|ABL89279.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium sp. KMS]
gi|126232454|gb|ABN95854.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium sp. JLS]
Length=169
Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/163 (69%), Positives = 136/163 (84%), Gaps = 1/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG +RA IVMS+ EIA+F++ SRT TLAT+ P G+PHL AMWYAV+DGEIW ETKAKSQ
Sbjct 1 MGKNERAKIVMSDPEIAEFIDHSRTATLATLLPSGRPHLVAMWYAVLDGEIWFETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVE-EPEALHRVGVSVWERYTGPYTD 119
KAVNLRRDP V+ ++EDG TY+TLRGVS +G AEIV+ +P+ L RVG+SVWERYTGPY+D
Sbjct 61 KAVNLRRDPTVTVMIEDGLTYNTLRGVSIDGRAEIVDSDPDLLLRVGISVWERYTGPYSD 120
Query 120 ECKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
+ KP VDQMM+ R+ VR+V RTRSWDHRKLG+P M + GSTA
Sbjct 121 DMKPFVDQMMHNRIAVRVVPERTRSWDHRKLGMPDMPLSGSTA 163
>gi|145221386|ref|YP_001132064.1| pyridoxamine 5'-phosphate oxidase-like protein [Mycobacterium
gilvum PYR-GCK]
gi|315441731|ref|YP_004074610.1| stress protein (general stress protein 26) [Mycobacterium sp.
Spyr1]
gi|145213872|gb|ABP43276.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Mycobacterium gilvum PYR-GCK]
gi|315260034|gb|ADT96775.1| uncharacterized stress protein (general stress protein 26) [Mycobacterium
sp. Spyr1]
Length=165
Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 104/162 (65%), Positives = 133/162 (83%), Gaps = 0/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG +R IVM++ EIA+F+ SRT T+AT+ P+G+PHL AMWYA++DGEIW ETKAKSQ
Sbjct 1 MGKNERGKIVMTDDEIAEFIERSRTATMATVLPNGRPHLVAMWYAILDGEIWFETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRDP ++ ++EDG +YDTLRGVS +G AEI+++PE RVG+SVWERYTGPYT+E
Sbjct 61 KAVNLRRDPTITVMIEDGLSYDTLRGVSIDGTAEIIDDPETNLRVGISVWERYTGPYTEE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
+P V+QMMN R+ VR++ RTRSWDHRKLG+ M + GSTA
Sbjct 121 MRPFVEQMMNNRISVRVIPSRTRSWDHRKLGMQGMPISGSTA 162
>gi|54026185|ref|YP_120427.1| hypothetical protein nfa42140 [Nocardia farcinica IFM 10152]
gi|54017693|dbj|BAD59063.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=185
Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/173 (65%), Positives = 131/173 (76%), Gaps = 12/173 (6%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGE---------- 50
MG QRA IVMS+ E+ +F+ SR TLAT+GP G PHLTAMW+A+I GE
Sbjct 1 MGVNQRAQIVMSDTEVTEFLERSRIATLATLGPTGTPHLTAMWFALIGGERGPDGTVTAL 60
Query 51 --IWLETKAKSQKAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVS 108
IW ETKAKSQKAVNLRRDPRV+ ++E G TYD LRGVSFEG AEIVE+P+ L VGVS
Sbjct 61 PEIWFETKAKSQKAVNLRRDPRVTCMVEAGQTYDQLRGVSFEGTAEIVEDPDKLWAVGVS 120
Query 109 VWERYTGPYTDECKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGST 161
VWERYTGPY++E +P+V M++KRV VR+V R RSWDHRKLGLP M +GGST
Sbjct 121 VWERYTGPYSEEVRPLVASMLHKRVAVRLVPTRIRSWDHRKLGLPAMPLGGST 173
>gi|300785772|ref|YP_003766063.1| pyridoxamine 5'-phosphate oxidase [Amycolatopsis mediterranei
U32]
gi|299795286|gb|ADJ45661.1| pyridoxamine 5'-phosphate oxidase [Amycolatopsis mediterranei
U32]
gi|340527235|gb|AEK42440.1| pyridoxamine 5'-phosphate oxidase [Amycolatopsis mediterranei
S699]
Length=168
Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/162 (66%), Positives = 126/162 (78%), Gaps = 0/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG QR IVMS AEI F+ R TLATI P GQPHL AMWYAV+DG +W ETKAKSQ
Sbjct 1 MGVNQREQIVMSAAEITGFLTEQRVATLATIAPSGQPHLVAMWYAVLDGVLWFETKAKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KA NLRRD RV+ ++E GDTYDTLRGV+ EG AEIV++ +AL VGV++WERY GPYT+E
Sbjct 61 KATNLRRDARVTVMIETGDTYDTLRGVALEGRAEIVDDADALWAVGVNIWERYNGPYTEE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
+PMV+ M+ KRV VR+ RTRSWDHRKLGLP + +GG+TA
Sbjct 121 TRPMVEFMLAKRVAVRLDVERTRSWDHRKLGLPALPLGGTTA 162
>gi|312195256|ref|YP_004015317.1| F420-dependent enzyme [Frankia sp. EuI1c]
gi|311226592|gb|ADP79447.1| putative F420-dependent enzyme [Frankia sp. EuI1c]
Length=166
Score = 223 bits (567), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 105/163 (65%), Positives = 126/163 (78%), Gaps = 0/163 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGT QR+ I M+ EI+ F+ RT TL T+G G PH AMW+AV+DG +W ETKAK+Q
Sbjct 1 MGTNQRSQIEMTSEEISAFLAGQRTATLVTVGATGHPHAVAMWFAVLDGTLWFETKAKAQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVN+RRDPRV+ LLEDG TYD LRGVS EG AEIV +PEAL VGV+VWERY GPYTDE
Sbjct 61 KAVNIRRDPRVTVLLEDGLTYDALRGVSLEGRAEIVTDPEALWAVGVNVWERYNGPYTDE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
KP+V+ M++KRV VR+ RTRSWDHRKLG+ +GG+TAP
Sbjct 121 VKPLVEVMLHKRVAVRVDVERTRSWDHRKLGMGPTPLGGTTAP 163
>gi|326381554|ref|ZP_08203248.1| PPOX class putative F420-dependent enzyme [Gordonia neofelifaecis
NRRL B-59395]
gi|326199801|gb|EGD56981.1| PPOX class putative F420-dependent enzyme [Gordonia neofelifaecis
NRRL B-59395]
Length=166
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/162 (66%), Positives = 124/162 (77%), Gaps = 1/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG QR+ IVMS+ EI F++ R LAT G +G HLTAMWY VIDG+IW ETKAKSQ
Sbjct 1 MGINQRSTIVMSDNEIETFISRHRIANLATQGKNGI-HLTAMWYGVIDGDIWFETKAKSQ 59
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
K VNLRRDP+ + L+EDGDTYDTLRGVS EG EI ++P+ +VGVSVWERY GPY+D+
Sbjct 60 KIVNLRRDPKATVLIEDGDTYDTLRGVSIEGAVEIFDDPDTCLKVGVSVWERYNGPYSDD 119
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
+P V+ MMNKRV VR+V R RSWDHRKLGLP M V GSTA
Sbjct 120 LRPAVEAMMNKRVAVRLVPSRIRSWDHRKLGLPSMPVAGSTA 161
>gi|302526919|ref|ZP_07279261.1| pyridoxamine 5'-phosphate oxidase [Streptomyces sp. AA4]
gi|302435814|gb|EFL07630.1| pyridoxamine 5'-phosphate oxidase [Streptomyces sp. AA4]
Length=170
Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/162 (65%), Positives = 125/162 (78%), Gaps = 0/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGT QRA I M+ EI+ ++ S RT TL ++GP G PH AMWYAVIDG +W ETKAK+Q
Sbjct 1 MGTNQRAQIEMTPEEISAYLASQRTATLVSLGPGGHPHAVAMWYAVIDGVLWFETKAKAQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
KAVNLRRDPRV+ L+EDG TYD LRGVS EG AE+V++P+AL VGV+VWERY G YTD+
Sbjct 61 KAVNLRRDPRVTVLVEDGLTYDVLRGVSLEGRAEVVDDPDALWAVGVNVWERYHGEYTDD 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
KPMV+ M+ KRV +R+ R RSWDHRKLGL M + GSTA
Sbjct 121 VKPMVEFMLRKRVAIRVDVERIRSWDHRKLGLDPMPLAGSTA 162
>gi|296141486|ref|YP_003648729.1| PPOX class F420-dependent enzyme [Tsukamurella paurometabola
DSM 20162]
gi|296029620|gb|ADG80390.1| PPOX class putative F420-dependent enzyme [Tsukamurella paurometabola
DSM 20162]
Length=165
Score = 214 bits (544), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/162 (63%), Positives = 122/162 (76%), Gaps = 0/162 (0%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MGT QR I MSEAEIA+F++ SRT T+AT+G G PHL AMWYAVIDG++W+ETK KSQ
Sbjct 1 MGTNQRGQIQMSEAEIAEFLDHSRTATIATVGASGAPHLVAMWYAVIDGDLWIETKGKSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
K VNLRR+P +S +E GD+YD LRGV+ EG AEIV++ + V V+ERY GPYTDE
Sbjct 61 KVVNLRRNPAMSASIEAGDSYDQLRGVAIEGTAEIVDDEATVRAVCEQVYERYFGPYTDE 120
Query 121 CKPMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
+P +D MMNKRV VR+ R RSWDHRKLG+ M V GSTA
Sbjct 121 LRPAIDAMMNKRVAVRLRTARIRSWDHRKLGMGAMPVSGSTA 162
>gi|288921217|ref|ZP_06415502.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
gi|288347371|gb|EFC81663.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
Length=161
Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 95/153 (63%), Positives = 120/153 (79%), Gaps = 0/153 (0%)
Query 11 MSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVNLRRDPR 70
M+ EI+ +V + RT TL ++GPDG PH AMW+AV+DG +W ETKAK+QKA+N+RRDPR
Sbjct 1 MTADEISAYVATRRTATLVSLGPDGHPHAVAMWFAVLDGVLWFETKAKAQKALNIRRDPR 60
Query 71 VSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDECKPMVDQMMN 130
V+ L+EDG TYD LRGVS EG AEIV++ E L VGV+VWERY GPY+ E KP+V+ M++
Sbjct 61 VTVLMEDGLTYDALRGVSLEGRAEIVDDAETLWNVGVNVWERYHGPYSGEIKPLVENMLH 120
Query 131 KRVGVRIVARRTRSWDHRKLGLPHMSVGGSTAP 163
KRV VR+ R RSWDH KLGLP + VGG+TAP
Sbjct 121 KRVAVRVDVERVRSWDHHKLGLPPIPVGGTTAP 153
>gi|119717036|ref|YP_924001.1| pyridoxamine 5'-phosphate oxidase-like protein [Nocardioides
sp. JS614]
gi|119537697|gb|ABL82314.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Nocardioides sp. JS614]
Length=165
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/160 (58%), Positives = 114/160 (72%), Gaps = 0/160 (0%)
Query 3 TKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKA 62
QRA +VMS E +F++ R+ TL T GP GQ HL MWYAV D IW ETK K+QK
Sbjct 2 ANQRAQVVMSHDEQVEFLHQQRSCTLGTFGPQGQIHLVGMWYAVHDDHIWFETKRKAQKT 61
Query 63 VNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDECK 122
VNLRRDPR SFL+E G TYD LRGV+ EG AE++E+ + V V+++ERY GPY++E K
Sbjct 62 VNLRRDPRCSFLVEAGHTYDQLRGVAIEGTAEVIEDESVVWDVCVNIFERYNGPYSEEMK 121
Query 123 PMVDQMMNKRVGVRIVARRTRSWDHRKLGLPHMSVGGSTA 162
P V+ M + RV VR+ +R RSWDHRKLGLP M +GGSTA
Sbjct 122 PFVEFMAHNRVVVRLDPQRVRSWDHRKLGLPAMELGGSTA 161
>gi|302531115|ref|ZP_07283457.1| predicted protein [Streptomyces sp. AA4]
gi|302440010|gb|EFL11826.1| predicted protein [Streptomyces sp. AA4]
Length=161
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/152 (40%), Positives = 92/152 (61%), Gaps = 5/152 (3%)
Query 5 QRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVN 64
+R I M+ E+ ++ + +A+IGP+G+PHLTA+WY +G + T SQKA N
Sbjct 7 RRDQIRMTPEEVQAYLAEQKVINVASIGPNGRPHLTALWYYPHEGGVATWTYGTSQKAKN 66
Query 65 LRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTG-----PYTD 119
LRR P + L+E G++YD LRG+SFE E VE+ E + +G+++ RY+G P D
Sbjct 67 LRRLPEATVLIESGESYDQLRGLSFEADVEFVEDTEQVTAMGIALMMRYSGAEPGAPVPD 126
Query 120 ECKPMVDQMMNKRVGVRIVARRTRSWDHRKLG 151
E + +++ KRVG+ + + SWDH KLG
Sbjct 127 ELRTFIERQAPKRVGLVLRPTKIASWDHSKLG 158
>gi|284047222|ref|YP_003397562.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Conexibacter woesei DSM 14684]
gi|283951443|gb|ADB54187.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Conexibacter woesei DSM 14684]
Length=155
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/152 (44%), Positives = 91/152 (60%), Gaps = 8/152 (5%)
Query 6 RADIV-MSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVN 64
R D++ M E E+ADF++ RT +AT GPDG PHL +WY V DGE+W T A+SQK N
Sbjct 3 RRDLIRMGEHELADFLDEQRTVVVATNGPDGWPHLMPLWYTVRDGELWSWTYARSQKVKN 62
Query 65 LRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDECKPM 124
L RD RV+ +EDG YD LRGV + + + + + G+ ++ RY G + P
Sbjct 63 LERDDRVTLQVEDGTAYDQLRGVMVKANVRLHRDADVVTAFGLELFARYGG--GGDAAPE 120
Query 125 VDQMMN----KRVGVRIVARRTR-SWDHRKLG 151
V+QM+ KRV ++ VA +WDHRKLG
Sbjct 121 VEQMVRAQAPKRVALQFVATEPPVTWDHRKLG 152
>gi|326331728|ref|ZP_08198016.1| PPOX class probable F420-dependent enzyme [Nocardioidaceae bacterium
Broad-1]
gi|325950527|gb|EGD42579.1| PPOX class probable F420-dependent enzyme [Nocardioidaceae bacterium
Broad-1]
Length=158
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/151 (45%), Positives = 92/151 (61%), Gaps = 3/151 (1%)
Query 6 RADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVNL 65
R + ++EAEI +F+ S +AT+GPDG PHLT ++Y + +G+I T SQK NL
Sbjct 5 RQSVQLTEAEIEEFLASQMKVQVATVGPDGAPHLTTLFYVLDEGKIVFWTYGSSQKVRNL 64
Query 66 RRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYT-GPYTDEC-KP 123
RRDPRV+ L+EDG Y LRGVS G A +VE+ + + +G V R G E +
Sbjct 65 RRDPRVTCLVEDGVDYFELRGVSITGKARLVEDYDEIKGIGSRVMTRMADGADLGELGED 124
Query 124 MVDQMMNKRVGVRIVARRTRSWDHRKLG-LP 153
+V + +KRVG+ I + SWDHRKLG LP
Sbjct 125 LVSKQAHKRVGIVIEPDKVASWDHRKLGALP 155
>gi|271969448|ref|YP_003343644.1| hypothetical protein Sros_8252 [Streptosporangium roseum DSM
43021]
gi|270512623|gb|ACZ90901.1| hypothetical protein Sros_8252 [Streptosporangium roseum DSM
43021]
Length=154
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/152 (43%), Positives = 86/152 (57%), Gaps = 2/152 (1%)
Query 4 KQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAV 63
QRA IVM+E EI F+ SR L TI PDG PH+ M+Y + +G I T K+QK +
Sbjct 2 NQRARIVMTEDEITAFIGESRKLQLGTINPDGTPHMVTMFYGLTEGRISFWTYGKAQKTL 61
Query 64 NLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTG-PYTDE-C 121
N++RD RVS L+E G+ Y LRGV G A +++ E + +G++V R G P +E
Sbjct 62 NIQRDARVSCLIEAGEEYSDLRGVLLYGTARRIDDSEGILEIGMNVARRMAGMPDAEELL 121
Query 122 KPMVDQMMNKRVGVRIVARRTRSWDHRKLGLP 153
V +KRV + R SWDHRKL P
Sbjct 122 TEYVAYTGHKRVAFVVEPTRVISWDHRKLATP 153
>gi|257057766|ref|YP_003135598.1| Pyridoxamine 5'-phosphate oxidase [Saccharomonospora viridis
DSM 43017]
gi|256587638|gb|ACU98771.1| Pyridoxamine 5'-phosphate oxidase [Saccharomonospora viridis
DSM 43017]
Length=161
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/158 (42%), Positives = 88/158 (56%), Gaps = 13/158 (8%)
Query 5 QRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGE----------IWLE 54
+R + MS E+ +V TLAT+GP+G+PHLT +WY D + W
Sbjct 3 RRDETRMSPEELVRYVTERTVITLATLGPNGRPHLTPLWYVPRDLDPDADPPLRLTTW-- 60
Query 55 TKAKSQKAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYT 114
T KSQKAVNLRRDPR + L+E GD+YD LRGVS E E+V + +A+ +G+ + RYT
Sbjct 61 TYGKSQKAVNLRRDPRATLLIESGDSYDQLRGVSMECDVELVTDTDAVAAIGLDLARRYT 120
Query 115 GP-YTDECKPMVDQMMNKRVGVRIVARRTRSWDHRKLG 151
D + V KRVG+ + SWDH KLG
Sbjct 121 PEGEVDALRQAVTAQAPKRVGLVCTPTKIVSWDHTKLG 158
>gi|256372547|ref|YP_003110371.1| pyridoxamine 5'-phosphate oxidase-like FMN- binding protein [Acidimicrobium
ferrooxidans DSM 10331]
gi|256009131|gb|ACU54698.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding [Acidimicrobium
ferrooxidans DSM 10331]
Length=152
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/147 (42%), Positives = 87/147 (60%), Gaps = 1/147 (0%)
Query 5 QRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVN 64
+R+ + M++ EIA ++ RT L + GP G H+ +WY V+DG +W T A+SQKA N
Sbjct 4 RRSHVAMTQDEIAALLSEGRTLVLGSHGPRGTIHMVPLWYVVLDGVVWSWTYARSQKARN 63
Query 65 LRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDECKPM 124
L R+ S L+E GD YD LRGV EG A + ++P + RVG + RY + + M
Sbjct 64 LAREATASGLVELGDRYDELRGVLIEGRAVLSDDPVLVRRVGEGLLARYELGSAEAAEAM 123
Query 125 VDQMMNKRVGVRIVARRTRSWDHRKLG 151
+ +KRV +R+ R SWDHRKLG
Sbjct 124 -RRSASKRVAIRLEPERIVSWDHRKLG 149
>gi|269125323|ref|YP_003298693.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Thermomonospora
curvata DSM 43183]
gi|268310281|gb|ACY96655.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Thermomonospora curvata DSM 43183]
Length=158
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/158 (40%), Positives = 91/158 (58%), Gaps = 8/158 (5%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
MG +R I M+ E+A F+ + +AT+ DG PHL M+Y ++DG+I T A+SQ
Sbjct 1 MGGNKRDQIRMTPEEVAAFLADNFKVQVATVDRDGAPHLVTMFYTLLDGKIAFTTYARSQ 60
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTG-PYTD 119
K VNLRR+P ++ L+EDG Y+ LRGV +G I+E+P+ VG V R G P +
Sbjct 61 KVVNLRRNPAMTCLVEDGLEYNELRGVKLKGTGRIIEDPKIRTMVGQVVGSRMAGLPVPE 120
Query 120 ECKPM-------VDQMMNKRVGVRIVARRTRSWDHRKL 150
+P+ +++ + KRV V + SWDHRKL
Sbjct 121 LGEPIDPVVAEGIEKALAKRVVVVMEPEHITSWDHRKL 158
>gi|256391375|ref|YP_003112939.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding [Catenulispora
acidiphila DSM 44928]
gi|256357601|gb|ACU71098.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding [Catenulispora
acidiphila DSM 44928]
Length=151
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/149 (45%), Positives = 93/149 (63%), Gaps = 3/149 (2%)
Query 5 QRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVN 64
QR I MS+ EI F + R +A+ DG PHL M+YA +DG++ T KSQK VN
Sbjct 3 QRDRIRMSDEEIETFFAAGRKLQVASANADGTPHLVTMYYAQLDGDLAFWTYGKSQKTVN 62
Query 65 LRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERY---TGPYTDEC 121
LRRDPR++ L+EDG YD LRGV+ G E++E+ + + G+++ RY G +
Sbjct 63 LRRDPRITCLVEDGIAYDELRGVTVYGDVELIEDYDQILSFGMALTARYPEVFGADPEAM 122
Query 122 KPMVDQMMNKRVGVRIVARRTRSWDHRKL 150
+P V+Q +KRV VR+ A+RT SWDH K+
Sbjct 123 RPFVEQQAHKRVVVRVRAKRTASWDHSKM 151
>gi|159038402|ref|YP_001537655.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Salinispora
arenicola CNS-205]
gi|157917237|gb|ABV98664.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding [Salinispora
arenicola CNS-205]
Length=159
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/155 (39%), Positives = 79/155 (51%), Gaps = 9/155 (5%)
Query 5 QRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVN 64
QR D+ M ++A + R LAT+ DG PHL +M+YA+ DG I T SQKA N
Sbjct 3 QRGDVAMPAEDVAAHLAHGRKLQLATVNRDGTPHLVSMFYAMHDGRIAFWTYRASQKARN 62
Query 65 LRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDECKP- 123
L RDPRV+ L+E+GD Y LRGV G +++ + +G + R P E P
Sbjct 63 LARDPRVTCLVEEGDGYFELRGVQVTGEVTRIDDLTGVVAIGRLIAARMPSPVASELPPG 122
Query 124 --------MVDQMMNKRVGVRIVARRTRSWDHRKL 150
V Q KRV + RR SWDHR+L
Sbjct 123 EVAAVLDGYVAQAATKRVAYLVETRRVVSWDHRRL 157
>gi|145595157|ref|YP_001159454.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Salinispora
tropica CNB-440]
gi|145304494|gb|ABP55076.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding [Salinispora
tropica CNB-440]
Length=160
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/157 (37%), Positives = 77/157 (50%), Gaps = 10/157 (6%)
Query 4 KQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAV 63
QRA + M A++ + + R LAT+ DG PHL +M+YA+ G I T SQKA
Sbjct 2 NQRATVAMPPADVEEHLAHGRKLQLATVNRDGTPHLVSMFYAMHAGRIAFWTYHASQKAR 61
Query 64 NLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDECKP 123
NL RDPRV+ L+E+GD Y LRGV G +++ + VG + R P P
Sbjct 62 NLTRDPRVTCLVEEGDGYFELRGVQVTGEVTRIDDLAGVAAVGRLIAARMPSPLVVGDLP 121
Query 124 ----------MVDQMMNKRVGVRIVARRTRSWDHRKL 150
V+ KR + RR SWDHR+L
Sbjct 122 PGEVAAALDGYVEHAAAKRAAYLVEPRRVVSWDHRRL 158
>gi|254385911|ref|ZP_05001229.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194344774|gb|EDX25740.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=164
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/145 (34%), Positives = 79/145 (55%), Gaps = 6/145 (4%)
Query 9 IVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVNLRRD 68
I+M++AE+ F+ RT +AT+ PDG+PH+ A+W+A +WL + +S++ +LR+D
Sbjct 23 IMMTDAEVDAFLREQRTCRVATVSPDGRPHVGALWFAWDGRSLWLYSITRSRRWADLRKD 82
Query 69 PRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDECKPM-VDQ 127
PR+S +++ G+ YD LRGV G A V E R G E K +++
Sbjct 83 PRISVVVDAGEAYDELRGVELSGTAVFVGEAP---RTGEPCPELAEAERIFPAKNFGIEE 139
Query 128 MMN--KRVGVRIVARRTRSWDHRKL 150
M + + +R+ SWD RKL
Sbjct 140 MPHDGRHAWIRLTPESVVSWDFRKL 164
>gi|324999535|ref|ZP_08120647.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Pseudonocardia sp. P1]
Length=158
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/154 (38%), Positives = 82/154 (54%), Gaps = 23/154 (14%)
Query 9 IVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWY---AVIDGEIWLETKAKSQKAVNL 65
I M+ E+A F+ RT +AT G +G PH T +WY G +WL + ++SQ+ +L
Sbjct 13 IAMTPEEVAAFLAEERTCRVATNGTNG-PHATPLWYLWDGADGGALWLTSLSRSQRWTDL 71
Query 66 RRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEE--------PEALHRVGVSVWERYTGPY 117
RDPR++ +++ G YD LRGV G EIV E PE L RV S +RYTG +
Sbjct 72 ERDPRIAVVVDAGHAYDELRGVELRGSVEIVGEVPRTGEPNPE-LERVEQSFADRYTGGH 130
Query 118 TDECKPMVDQMMNKRVG-VRIVARRTRSWDHRKL 150
+++ R G +R+ + SWD RKL
Sbjct 131 V---------LIDGRHGWLRLRPEKISSWDFRKL 155
>gi|294628213|ref|ZP_06706773.1| PPOX class F420-dependent enzyme [Streptomyces sp. e14]
gi|292831546|gb|EFF89895.1| PPOX class F420-dependent enzyme [Streptomyces sp. e14]
Length=155
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/167 (30%), Positives = 82/167 (50%), Gaps = 32/167 (19%)
Query 1 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
+G ++ I+M+ E+ +F+ + RT +AT+ G PH++A+W+ +WL + +S+
Sbjct 3 VGQRRGRRIMMTPGELDEFLATERTCRVATVSAGGAPHVSALWFVWDGASLWLYSVVRSR 62
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDE 120
+ +LRRDPRV+ +++ G+ YD LRGV G E V E P T E
Sbjct 63 RWADLRRDPRVAVVVDTGEEYDRLRGVELSGAVEFVGE----------------APRTGE 106
Query 121 CKPMVD----QMMNKRVG------------VRIVARRTRSWDHRKLG 151
+ +D K G +R+ ++T SWD RKLG
Sbjct 107 LRAELDLPETLFARKYFGLEEMPHDGRHAWLRLTPQKTVSWDFRKLG 153
>gi|297198178|ref|ZP_06915575.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197714677|gb|EDY58711.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=155
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/145 (34%), Positives = 77/145 (54%), Gaps = 4/145 (2%)
Query 9 IVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVNLRRD 68
I+M+ E+ +F+ S RT +AT+ DG PH++ +W+A +WL + +S++ +LRRD
Sbjct 11 IMMTPGELDEFLTSQRTCRVATVSADGAPHVSTLWFAWDGTSMWLYSVVRSKRWTDLRRD 70
Query 69 PRVSFLLEDGDTYDTLRGVSFEGVAEIV-EEPEALH-RVGVSVWERYTGPYTDECKPMVD 126
PRV+ +++ G+ YD LRGV G + V E P R + V E + M
Sbjct 71 PRVAIVVDTGEEYDELRGVELSGTVDFVGEAPRTGELRAELDVPETLFARKNFRLEEMPH 130
Query 127 QMMNKRVGVRIVARRTRSWDHRKLG 151
+ +R+ + SWD RKLG
Sbjct 131 D--GRHAWIRLTPEKIVSWDFRKLG 153
>gi|302549998|ref|ZP_07302340.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
gi|302467616|gb|EFL30709.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
Length=156
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/153 (33%), Positives = 79/153 (52%), Gaps = 6/153 (3%)
Query 3 TKQRA--DIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ 60
T+QR I+M+ E+ DF+ + RT +ATI DG PH++ +W+A +WL + +S+
Sbjct 4 TQQRRGRKIMMTPGELDDFLTTQRTCRVATISADGAPHVSTLWFAWDGRSMWLYSVVRSK 63
Query 61 KAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALH--RVGVSVWERYTGPYT 118
+ +LRRDPRV+ +++ G+ YD LRG G E V E + R + V E
Sbjct 64 RWTDLRRDPRVAIVVDTGEEYDELRGAELSGTVEFVGEIPRIGELRAELDVPEMLFARKN 123
Query 119 DECKPMVDQMMNKRVGVRIVARRTRSWDHRKLG 151
+ M + +R+ + SWD RKL
Sbjct 124 FHLEEMPHD--GRHAWLRLTPEKVVSWDFRKLA 154
>gi|288917848|ref|ZP_06412209.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
gi|288350776|gb|EFC84992.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
Length=173
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/155 (36%), Positives = 74/155 (48%), Gaps = 27/155 (17%)
Query 9 IVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVNLRRD 68
I MS+AEI DF+ RT +AT P G PHLT +W+A +WL + KSQ+ +L RD
Sbjct 33 IAMSQAEIDDFLAEQRTCRVATSSPSG-PHLTPLWFAWDGTSLWLNSVVKSQRWTDLERD 91
Query 69 PRVSFLLEDGDTYDTLRGVSFEGVAEIV-------------EEPEALHRVGVSVWERYTG 115
PRV+ +++ GD + LRGV G E V E PE L Y
Sbjct 92 PRVAVVVDTGDAFTELRGVEIRGRVESVGDVPRSGAPDPDLETPELL----------YAR 141
Query 116 PYTDECKPMVDQMMNKRVGVRIVARRTRSWDHRKL 150
YT K D + +R+ + SWD RK+
Sbjct 142 KYTGGDKMHYD---GRHAWLRVTPEKLTSWDFRKM 173
>gi|297195642|ref|ZP_06913040.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197719016|gb|EDY62924.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=155
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/90 (43%), Positives = 58/90 (65%), Gaps = 0/90 (0%)
Query 9 IVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVNLRRD 68
I+MS AE+ F+ RT +AT+ PDG+PH++A+W+A +WL + +S++ LRRD
Sbjct 11 IMMSPAELDAFLTEQRTCRVATVSPDGRPHVSALWFAWDGTSLWLYSLTRSRRWAELRRD 70
Query 69 PRVSFLLEDGDTYDTLRGVSFEGVAEIVEE 98
PRV+ +++ G+ Y LRGV G A V E
Sbjct 71 PRVAVVVDAGEEYGDLRGVELSGTAVFVGE 100
>gi|291440917|ref|ZP_06580307.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291343812|gb|EFE70768.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length=156
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/158 (32%), Positives = 78/158 (50%), Gaps = 30/158 (18%)
Query 9 IVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVNLRRD 68
I+M+ E+ DF+ RT +AT+ DG PH++A+W+ +WL + +S++ +LRRD
Sbjct 11 IMMTPGELDDFLTGQRTCRVATVSADGAPHVSALWFVWDGVSLWLYSVVRSKRWADLRRD 70
Query 69 PRVSFLLEDGDTYDTLRGVSFEGVAEIVEE-------------PEALHRVGVSVWERYTG 115
PRV+ ++ G+ YD LRG G E V E PE L +Y G
Sbjct 71 PRVAIAVDTGEEYDELRGAELSGRMEFVGEVPRTGELRAELDVPETLFA------RKYFG 124
Query 116 PYTDECKPMVDQMMN--KRVGVRIVARRTRSWDHRKLG 151
+D+M + + +R+ + SWD RKLG
Sbjct 125 ---------LDEMPHDGRHAWMRLTPEKVVSWDFRKLG 153
>gi|329941497|ref|ZP_08290762.1| hypothetical protein SGM_6254 [Streptomyces griseoaurantiacus
M045]
gi|329299214|gb|EGG43114.1| hypothetical protein SGM_6254 [Streptomyces griseoaurantiacus
M045]
Length=155
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/159 (30%), Positives = 78/159 (50%), Gaps = 32/159 (20%)
Query 9 IVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQKAVNLRRD 68
I+M+ AE+ +F+ + R +AT+ +G PH++ +W+ +WL + +S++ +LRRD
Sbjct 11 IMMTPAELDEFLTTQRNCRVATVSAEGAPHVSTLWFVWDGTSMWLYSVVRSKRWAHLRRD 70
Query 69 PRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDECKPMVD-- 126
PR++ +++ G+ Y+ LRGV G AE V E P T E + +D
Sbjct 71 PRIAVVVDTGEEYEELRGVELSGTAEFVGEV----------------PRTGELRAELDVP 114
Query 127 --QMMNKRVG------------VRIVARRTRSWDHRKLG 151
K G +R+ +T SWD RKLG
Sbjct 115 ETLFARKNFGIEEMPHDGRHAWIRLTPEKTVSWDFRKLG 153
Lambda K H
0.317 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129924364284
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40