BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2999 Length=321 Score E Sequences producing significant alignments: (Bits) Value gi|167967833|ref|ZP_02550110.1| hypothetical protein MtubH3_0729... 651 0.0 gi|15610136|ref|NP_217515.1| lipoprotein LppY [Mycobacterium tub... 651 0.0 gi|148824189|ref|YP_001288943.1| lipoprotein lppY [Mycobacterium... 650 0.0 gi|15842556|ref|NP_337593.1| hypothetical protein MT3078 [Mycoba... 649 0.0 gi|31794176|ref|NP_856669.1| lipoprotein LppY [Mycobacterium bov... 649 0.0 gi|340627989|ref|YP_004746441.1| putative lipoprotein LPPY [Myco... 647 0.0 gi|116662416|ref|YP_829469.1| protein of unknown function LppY a... 375 4e-102 gi|170783572|ref|YP_001740089.1| lipoprotein [Arthrobacter sp. C... 372 4e-101 gi|31791786|ref|NP_854279.1| lipoprotein lpqo [Mycobacterium bov... 331 1e-88 gi|167969028|ref|ZP_02551305.1| lipoprotein lpqO [Mycobacterium ... 329 5e-88 gi|15607744|ref|NP_215118.1| lipoprotein lpqo [Mycobacterium tub... 328 6e-88 gi|306783248|ref|ZP_07421570.1| lipoprotein lpqO [Mycobacterium ... 327 1e-87 gi|289446157|ref|ZP_06435901.1| lipoprotein lpqO [Mycobacterium ... 326 3e-87 gi|337767795|emb|CCB76506.1| conserved exported protein of unkno... 294 1e-77 gi|111025515|ref|YP_707935.1| hypothetical protein RHA1_ro08733 ... 266 4e-69 gi|337768783|emb|CCB77496.1| conserved exported protein of unkno... 256 3e-66 gi|254387982|ref|ZP_05003219.1| conserved hypothetical protein [... 251 1e-64 gi|326446146|ref|ZP_08220880.1| hypothetical protein SclaA2_3400... 250 2e-64 gi|94970469|ref|YP_592517.1| protein of unknown function LppY an... 245 8e-63 gi|337763068|emb|CCB71776.1| conserved exported protein of unkno... 243 4e-62 gi|182679065|ref|YP_001833211.1| hypothetical protein Bind_2102 ... 229 4e-58 gi|182679473|ref|YP_001833619.1| hypothetical protein Bind_2528 ... 222 7e-56 gi|148255054|ref|YP_001239639.1| hypothetical protein BBta_3649 ... 221 9e-56 gi|188581147|ref|YP_001924592.1| hypothetical protein Mpop_1894 ... 221 1e-55 gi|27383178|ref|NP_774707.1| hypothetical protein bll8067 [Brady... 220 3e-55 gi|27378194|ref|NP_769723.1| hypothetical protein blr3083 [Brady... 212 7e-53 gi|85717674|ref|ZP_01048611.1| LpqO protein-like [Nitrobacter sp... 211 1e-52 gi|170744209|ref|YP_001772864.1| hypothetical protein M446_6160 ... 209 4e-52 gi|85715795|ref|ZP_01046774.1| hypothetical protein NB311A_13461... 209 6e-52 gi|218532625|ref|YP_002423441.1| hypothetical protein Mchl_4739 ... 207 3e-51 gi|345138082|dbj|BAK67691.1| hypothetical protein SLG_30160 [Sph... 202 4e-50 gi|92117415|ref|YP_577144.1| protein of unknown function LppY an... 202 5e-50 gi|153940690|ref|YP_001390103.1| LysM domain-containing protein ... 201 2e-49 gi|170754998|ref|YP_001780388.1| LysM domain-containing protein ... 196 4e-48 gi|148378747|ref|YP_001253288.1| LysM domain protein [Clostridiu... 195 7e-48 gi|220922216|ref|YP_002497518.1| hypothetical protein Mnod_2235 ... 194 2e-47 gi|220914849|ref|YP_002490157.1| protein of unknown function Lpp... 192 6e-47 gi|339009511|ref|ZP_08642083.1| LysM domain protein [Brevibacill... 191 1e-46 gi|282163979|ref|YP_003356364.1| hypothetical protein MCP_1309 [... 178 9e-43 gi|73669551|ref|YP_305566.1| hypothetical protein Mbar_A2052 [Me... 177 1e-42 gi|289752644|ref|ZP_06512022.1| LOW QUALITY PROTEIN: lipoprotein... 171 2e-40 gi|282163980|ref|YP_003356365.1| hypothetical protein MCP_1310 [... 170 2e-40 gi|108760499|ref|YP_630020.1| LppY/LpqO family protein [Myxococc... 166 4e-39 gi|295133340|ref|YP_003584016.1| LppY/LpqO family protein [Zunon... 155 7e-36 gi|116625935|ref|YP_828091.1| hypothetical protein Acid_6893 [Ca... 149 7e-34 gi|284037708|ref|YP_003387638.1| hypothetical protein Slin_2825 ... 147 2e-33 gi|186473934|ref|YP_001861276.1| protein of unknown function Lpp... 141 1e-31 gi|323525653|ref|YP_004227806.1| hypothetical protein BC1001_130... 141 1e-31 gi|82703579|ref|YP_413145.1| hypothetical protein Nmul_A2464 [Ni... 141 1e-31 gi|282891679|ref|ZP_06300166.1| hypothetical protein pah_c188o05... 137 3e-30 >gi|167967833|ref|ZP_02550110.1| hypothetical protein MtubH3_07292 [Mycobacterium tuberculosis H37Ra] Length=326 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/321 (100%), Positives = 321/321 (100%), Gaps = 0/321 (0%) Query 1 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR 60 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR Sbjct 6 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR 65 Query 61 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 120 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE Sbjct 66 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 125 Query 121 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 180 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP Sbjct 126 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 185 Query 181 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVI 240 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVI Sbjct 186 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVI 245 Query 241 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 300 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD Sbjct 246 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 305 Query 301 DAVTLARALRPAMDATNLQSS 321 DAVTLARALRPAMDATNLQSS Sbjct 306 DAVTLARALRPAMDATNLQSS 326 >gi|15610136|ref|NP_217515.1| lipoprotein LppY [Mycobacterium tuberculosis H37Rv] gi|148662849|ref|YP_001284372.1| putative lipoprotein LppY [Mycobacterium tuberculosis H37Ra] gi|307085724|ref|ZP_07494837.1| lipoprotein lppY [Mycobacterium tuberculosis SUMu012] gi|2791596|emb|CAA16084.1| PROBABLE CONSERVED LIPOPROTEIN LPPY [Mycobacterium tuberculosis H37Rv] gi|148507001|gb|ABQ74810.1| putative lipoprotein LppY [Mycobacterium tuberculosis H37Ra] gi|308364757|gb|EFP53608.1| lipoprotein lppY [Mycobacterium tuberculosis SUMu012] Length=321 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/321 (100%), Positives = 321/321 (100%), Gaps = 0/321 (0%) Query 1 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR 60 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR Sbjct 1 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR 60 Query 61 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 120 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE Sbjct 61 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 120 Query 121 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 180 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP Sbjct 121 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 180 Query 181 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVI 240 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVI Sbjct 181 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVI 240 Query 241 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 300 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD Sbjct 241 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 300 Query 301 DAVTLARALRPAMDATNLQSS 321 DAVTLARALRPAMDATNLQSS Sbjct 301 DAVTLARALRPAMDATNLQSS 321 >gi|148824189|ref|YP_001288943.1| lipoprotein lppY [Mycobacterium tuberculosis F11] gi|253797906|ref|YP_003030907.1| lipoprotein lppY [Mycobacterium tuberculosis KZN 1435] gi|254233082|ref|ZP_04926409.1| lipoprotein lppY [Mycobacterium tuberculosis C] 10 more sequence titles Length=326 Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/321 (99%), Positives = 321/321 (100%), Gaps = 0/321 (0%) Query 1 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR 60 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR Sbjct 6 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR 65 Query 61 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 120 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE Sbjct 66 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 125 Query 121 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 180 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP Sbjct 126 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 185 Query 181 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVI 240 TPPPARQPPVDIDVAGVDQALGRKGTQDGGL+KYSIPRKDTIIEDGHVLPAVSLNLTTVI Sbjct 186 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVI 245 Query 241 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 300 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD Sbjct 246 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 305 Query 301 DAVTLARALRPAMDATNLQSS 321 DAVTLARALRPAMDATNLQSS Sbjct 306 DAVTLARALRPAMDATNLQSS 326 >gi|15842556|ref|NP_337593.1| hypothetical protein MT3078 [Mycobacterium tuberculosis CDC1551] gi|13882868|gb|AAK47407.1| hypothetical protein MT3078 [Mycobacterium tuberculosis CDC1551] gi|323718379|gb|EGB27553.1| lipoprotein lppY [Mycobacterium tuberculosis CDC1551A] Length=329 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/321 (99%), Positives = 321/321 (100%), Gaps = 0/321 (0%) Query 1 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR 60 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR Sbjct 9 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR 68 Query 61 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 120 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE Sbjct 69 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 128 Query 121 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 180 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP Sbjct 129 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 188 Query 181 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVI 240 TPPPARQPPVDIDVAGVDQALGRKGTQDGGL+KYSIPRKDTIIEDGHVLPAVSLNLTTVI Sbjct 189 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVI 248 Query 241 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 300 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD Sbjct 249 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 308 Query 301 DAVTLARALRPAMDATNLQSS 321 DAVTLARALRPAMDATNLQSS Sbjct 309 DAVTLARALRPAMDATNLQSS 329 >gi|31794176|ref|NP_856669.1| lipoprotein LppY [Mycobacterium bovis AF2122/97] gi|121638881|ref|YP_979105.1| putative lipoprotein lppY [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991373|ref|YP_002646062.1| putative lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] 55 more sequence titles Length=321 Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/321 (99%), Positives = 321/321 (100%), Gaps = 0/321 (0%) Query 1 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR 60 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR Sbjct 1 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR 60 Query 61 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 120 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE Sbjct 61 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 120 Query 121 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 180 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP Sbjct 121 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 180 Query 181 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVI 240 TPPPARQPPVDIDVAGVDQALGRKGTQDGGL+KYSIPRKDTIIEDGHVLPAVSLNLTTVI Sbjct 181 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVI 240 Query 241 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 300 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD Sbjct 241 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 300 Query 301 DAVTLARALRPAMDATNLQSS 321 DAVTLARALRPAMDATNLQSS Sbjct 301 DAVTLARALRPAMDATNLQSS 321 >gi|340627989|ref|YP_004746441.1| putative lipoprotein LPPY [Mycobacterium canettii CIPT 140010059] gi|340006179|emb|CCC45353.1| putative conserved lipoprotein LPPY [Mycobacterium canettii CIPT 140010059] Length=321 Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/321 (99%), Positives = 320/321 (99%), Gaps = 0/321 (0%) Query 1 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGR 60 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTD DWKPVADALGR Sbjct 1 MAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDTDWKPVADALGR 60 Query 61 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 120 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE Sbjct 61 SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEE 120 Query 121 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 180 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP Sbjct 121 ELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPP 180 Query 181 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVI 240 TPPPARQPPVDIDVAGVDQALGRKGTQDGGL+KYSIPRKDTIIEDGHVLPAVSLNLTTVI Sbjct 181 TPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVI 240 Query 241 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 300 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD Sbjct 241 NFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVD 300 Query 301 DAVTLARALRPAMDATNLQSS 321 DAVTLARALRPAMDATNLQSS Sbjct 301 DAVTLARALRPAMDATNLQSS 321 >gi|116662416|ref|YP_829469.1| protein of unknown function LppY and LpqO [Arthrobacter sp. FB24] gi|116613195|gb|ABK05888.1| protein of unknown function LppY and LpqO [Arthrobacter sp. FB24] Length=337 Score = 375 bits (964), Expect = 4e-102, Method: Compositional matrix adjust. Identities = 189/300 (63%), Positives = 231/300 (77%), Gaps = 3/300 (1%) Query 22 AACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLH 81 A S+GS + G K +T +ADW PV DALGR+GK GD NT YRI LPR DLH Sbjct 40 AGPSTGSTHDSSMGADAKQLQPASTAEADWNPVTDALGRTGKFGDGNTVYRIPLPRTDLH 99 Query 82 ITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHK 141 + + GV +K GLSLGGYAAFA+YD+ T+LMGDLV+TE ELPKVTDALQAHGI QTALHK Sbjct 100 VVTGGVAVKSGLSLGGYAAFAKYDDG-TMLMGDLVVTEAELPKVTDALQAHGIGQTALHK 158 Query 142 HLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQAL 201 HL +Q P VWWTHIH MGD +LA+GLKAALDAT I P + P D+D AG+D AL Sbjct 159 HLPEQSPSVWWTHIHAMGDPVKLAEGLKAALDATAIAPAAAAGDQTAP-DLDSAGIDAAL 217 Query 202 GRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAP 261 GRKG DGG+ K+S+PR +TI ++GHVLP + +TT INFQPVG G+AAINGDF +I P Sbjct 218 GRKGAADGGIYKFSLPRAETITDEGHVLPP-TFGVTTAINFQPVGGGKAAINGDFAMIGP 276 Query 262 EVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNLQSS 321 EVQ+VI+A+R G IT+V +HNH LT+EPRLFY H+WAV+DAVTLA+ALR A+D+TNL+++ Sbjct 277 EVQKVIQALRKGGITVVSVHNHSLTDEPRLFYAHFWAVEDAVTLAKALRAALDSTNLKAA 336 >gi|170783572|ref|YP_001740089.1| lipoprotein [Arthrobacter sp. Chr15] gi|150035080|gb|ABR67076.1| hypothetical lipoprotein [Arthrobacter sp. Chr15] Length=327 Score = 372 bits (956), Expect = 4e-101, Method: Compositional matrix adjust. Identities = 186/281 (67%), Positives = 225/281 (81%), Gaps = 2/281 (0%) Query 41 RSAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAA 100 R T+DADWKPV +ALGR+GK GDNNT YRI LPR DLH+TS GVDIKPGLSLGGYAA Sbjct 48 REPDATSDADWKPVTEALGRTGKFGDNNTVYRIPLPRTDLHVTSQGVDIKPGLSLGGYAA 107 Query 101 FARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGD 160 FA+YD+ +LMGDLV+TE ELPKVTDALQAHGI QTA+HKHLL+Q P VWWTHIH MGD Sbjct 108 FAKYDDG-VMLMGDLVVTEAELPKVTDALQAHGIEQTAVHKHLLEQSPAVWWTHIHAMGD 166 Query 161 AARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKD 220 ++A+G+KAALDAT I P A QPPVD+D A +D ALGRKGT DGG+ KYS+ RK+ Sbjct 167 PVKIAEGIKAALDATAIPAAAAPAATQPPVDLDTAAIDAALGRKGTADGGIYKYSLARKE 226 Query 221 TIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVEL 280 TI + +LP + +TT +NFQP+G G+AAINGDF L EVQ V++A+R G I IVEL Sbjct 227 TITDGNDILPP-TFGITTAVNFQPLGGGKAAINGDFALTESEVQPVMQALRKGGIDIVEL 285 Query 281 HNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNLQSS 321 H+H LTE+PRLFY+H+WAV+DA LA+ALRPA+DA +L+S+ Sbjct 286 HSHSLTEQPRLFYLHFWAVNDATALAKALRPALDANDLKSA 326 >gi|31791786|ref|NP_854279.1| lipoprotein lpqo [Mycobacterium bovis AF2122/97] gi|121636522|ref|YP_976745.1| putative lipoprotein lpqO [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988994|ref|YP_002643681.1| putative lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] 12 more sequence titles Length=316 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 158/278 (57%), Positives = 205/278 (74%), Gaps = 2/278 (0%) Query 39 KARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGY 98 + S TT+DADWKPVAD LGR+GKL D + Y+I R+DL + + GV + P LSLG + Sbjct 38 RGASLATTSDADWKPVADILGRTGKLNDGSV-YKIGFARSDLSVQTKGVTVAPALSLGSW 96 Query 99 AAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGM 158 AFAR + +T+LMGDLV+TE+EL VTDA+QA G+ QTALHKHLL+Q PP+WWTHI G Sbjct 97 VAFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGH 156 Query 159 GDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPR 218 GDAA LA+ +++ALDAT PP P + Q +D+D A +D+ALGR GT GG+ K+ I R Sbjct 157 GDAADLARAVRSALDATDTPPPAPATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIAR 216 Query 219 KDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIV 278 +D + G ++P S+ L T +NFQP G GRAAINGDF++ A EVQ+V++A+R G I IV Sbjct 217 RDPVTMSGMLIPP-SMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIV 275 Query 279 ELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 +HNHG E+PRLFYMH+WA +DAV LAR LR A+DAT Sbjct 276 AIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDAT 313 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query 191 DIDVAGVDQALGRKGT-QDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGR 249 D D V LGR G DG + K R D ++ V A +L+L + + F G+ Sbjct 47 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 106 Query 250 AAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARAL 309 + GD ++ E+ V A++AG + LH H L + P +++ H DA LARA+ Sbjct 107 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 166 Query 310 RPAMDATN 317 R A+DAT+ Sbjct 167 RSALDATD 174 >gi|167969028|ref|ZP_02551305.1| lipoprotein lpqO [Mycobacterium tuberculosis H37Ra] gi|253797538|ref|YP_003030539.1| lipoprotein lpqO [Mycobacterium tuberculosis KZN 1435] gi|254230941|ref|ZP_04924268.1| lipoprotein lpqO [Mycobacterium tuberculosis C] 32 more sequence titles Length=308 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 157/278 (57%), Positives = 204/278 (74%), Gaps = 2/278 (0%) Query 39 KARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGY 98 + S TT+DADWKPVAD LGR+GKL D + Y+I R+DL + + GV + P LSLG + Sbjct 30 RGASLATTSDADWKPVADILGRTGKLNDGSV-YKIGFARSDLSVQTKGVTVAPALSLGSW 88 Query 99 AAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGM 158 AFAR + +T+LMGDLV+TE+EL VTDA+QA G+ QTALHKHLL+Q PP+WWTHI G Sbjct 89 VAFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGH 148 Query 159 GDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPR 218 GDAA LA+ +++ALDAT PP + Q +D+D A +D+ALGR GT GG+ K+ I R Sbjct 149 GDAADLARAVRSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIAR 208 Query 219 KDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIV 278 +D + G ++P S+ L T +NFQP G GRAAINGDF++ A EVQ+V++A+R G I IV Sbjct 209 RDPVTMSGMLIPP-SMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIV 267 Query 279 ELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 +HNHG E+PRLFYMH+WA +DAV LAR LR A+DAT Sbjct 268 AIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDAT 305 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query 191 DIDVAGVDQALGRKGT-QDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGR 249 D D V LGR G DG + K R D ++ V A +L+L + + F G+ Sbjct 39 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 98 Query 250 AAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARAL 309 + GD ++ E+ V A++AG + LH H L + P +++ H DA LARA+ Sbjct 99 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 158 Query 310 RPAMDATN 317 R A+DAT+ Sbjct 159 RSALDATD 166 >gi|15607744|ref|NP_215118.1| lipoprotein lpqo [Mycobacterium tuberculosis H37Rv] gi|15840005|ref|NP_335042.1| hypothetical protein MT0632 [Mycobacterium tuberculosis CDC1551] gi|148660374|ref|YP_001281897.1| putative lipoprotein LpqO [Mycobacterium tuberculosis H37Ra] 20 more sequence titles Length=316 Score = 328 bits (841), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 157/278 (57%), Positives = 204/278 (74%), Gaps = 2/278 (0%) Query 39 KARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGY 98 + S TT+DADWKPVAD LGR+GKL D + Y+I R+DL + + GV + P LSLG + Sbjct 38 RGASLATTSDADWKPVADILGRTGKLNDGSV-YKIGFARSDLSVQTKGVTVAPALSLGSW 96 Query 99 AAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGM 158 AFAR + +T+LMGDLV+TE+EL VTDA+QA G+ QTALHKHLL+Q PP+WWTHI G Sbjct 97 VAFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGH 156 Query 159 GDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPR 218 GDAA LA+ +++ALDAT PP + Q +D+D A +D+ALGR GT GG+ K+ I R Sbjct 157 GDAADLARAVRSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIAR 216 Query 219 KDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIV 278 +D + G ++P S+ L T +NFQP G GRAAINGDF++ A EVQ+V++A+R G I IV Sbjct 217 RDPVTMSGMLIPP-SMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIV 275 Query 279 ELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 +HNHG E+PRLFYMH+WA +DAV LAR LR A+DAT Sbjct 276 AIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDAT 313 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query 191 DIDVAGVDQALGRKGT-QDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGR 249 D D V LGR G DG + K R D ++ V A +L+L + + F G+ Sbjct 47 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 106 Query 250 AAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARAL 309 + GD ++ E+ V A++AG + LH H L + P +++ H DA LARA+ Sbjct 107 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 166 Query 310 RPAMDATN 317 R A+DAT+ Sbjct 167 RSALDATD 174 >gi|306783248|ref|ZP_07421570.1| lipoprotein lpqO [Mycobacterium tuberculosis SUMu003] gi|308331911|gb|EFP20762.1| lipoprotein lpqO [Mycobacterium tuberculosis SUMu003] Length=308 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 157/278 (57%), Positives = 203/278 (74%), Gaps = 2/278 (0%) Query 39 KARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGY 98 + S TT+DADWKPVAD LGR+GKL D + Y+I R+DL + + GV + P LSLG + Sbjct 30 RGASLATTSDADWKPVADILGRTGKLNDGSV-YKIGFARSDLSVQTKGVTVAPALSLGSW 88 Query 99 AAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGM 158 AFAR + +T+LMGDLV+TE+EL VTDA+QA G+ QTALHKHLL+Q PP+WWTHI G Sbjct 89 VAFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGH 148 Query 159 GDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPR 218 GDAA LA+ +++ALDAT PP + Q +D+D A +D+ALGR GT GG+ K+ I R Sbjct 149 GDAADLARAVRSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIAR 208 Query 219 KDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIV 278 +D + G ++P S L T +NFQP G GRAAINGDF++ A EVQ+V++A+R G I IV Sbjct 209 RDPVTMSGMLIPP-STGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIV 267 Query 279 ELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 +HNHG E+PRLFYMH+WA +DAV LAR LR A+DAT Sbjct 268 AIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDAT 305 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query 191 DIDVAGVDQALGRKGT-QDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGR 249 D D V LGR G DG + K R D ++ V A +L+L + + F G+ Sbjct 39 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 98 Query 250 AAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARAL 309 + GD ++ E+ V A++AG + LH H L + P +++ H DA LARA+ Sbjct 99 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 158 Query 310 RPAMDATN 317 R A+DAT+ Sbjct 159 RSALDATD 166 >gi|289446157|ref|ZP_06435901.1| lipoprotein lpqO [Mycobacterium tuberculosis CPHL_A] gi|289419115|gb|EFD16316.1| lipoprotein lpqO [Mycobacterium tuberculosis CPHL_A] Length=309 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 158/279 (57%), Positives = 205/279 (74%), Gaps = 3/279 (1%) Query 39 KARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKP-GLSLGG 97 + S TT+DADWKPVAD LGR+GKL D + Y+I R+DL + + GV + P LSLG Sbjct 30 RGASLATTSDADWKPVADILGRTGKLNDGSV-YKIGFARSDLSVQTKGVTVAPPALSLGS 88 Query 98 YAAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHG 157 + AFAR + +T+LMGDLV+TE+EL VTDA+QA G+ QTALHKHLL+Q PP+WWTHI G Sbjct 89 WVAFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAG 148 Query 158 MGDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIP 217 GDAA LA+ +++ALDAT PP P + Q +D+D A +D+ALGR GT GG+ K+ I Sbjct 149 HGDAADLARAVRSALDATDTPPPAPATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIA 208 Query 218 RKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITI 277 R+D + G ++P S+ L T +NFQP G GRAAINGDF++ A EVQ+V++A+R G I I Sbjct 209 RRDPVTMSGMLIPP-SMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDI 267 Query 278 VELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 V +HNHG E+PRLFYMH+WA +DAV LAR LR A+DAT Sbjct 268 VAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDAT 306 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/129 (32%), Positives = 64/129 (50%), Gaps = 2/129 (1%) Query 191 DIDVAGVDQALGRKGT-QDGGLMKYSIPRKDTIIE-DGHVLPAVSLNLTTVINFQPVGRG 248 D D V LGR G DG + K R D ++ G + +L+L + + F G Sbjct 39 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPPALSLGSWVAFARTPDG 98 Query 249 RAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARA 308 + + GD ++ E+ V A++AG + LH H L + P +++ H DA LARA Sbjct 99 QTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARA 158 Query 309 LRPAMDATN 317 +R A+DAT+ Sbjct 159 VRSALDATD 167 >gi|337767795|emb|CCB76506.1| conserved exported protein of unknown function [Streptomyces cattleya NRRL 8057] Length=354 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 158/326 (49%), Positives = 211/326 (65%), Gaps = 22/326 (6%) Query 11 VAITTAAAVILAACSS---GSKGGAGSGHAG---------------KARSAVTTTDADWK 52 VA+TT A V L AC++ G+ AG GH G + T DADWK Sbjct 17 VALTTCA-VTLTACAAQGAGTGTSAGDGHPGPPAPRGAHRHRAHCPHVQYPERTKDADWK 75 Query 53 PVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLM 112 VA+ALGR+G ++ A+ ++LPR DL +TS+GV + L+L G AAF RY + T+LM Sbjct 76 GVAEALGRTGTTRED-VAFGVSLPRRDLKVTSHGVTVLSSLALAGSAAFVRYCDG-TMLM 133 Query 113 GDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAAL 172 GDLV+T +E+ K +DALQA GI QTALHKHL + P +WWTH H MGD LA+ LK L Sbjct 134 GDLVLTGDEVDKASDALQAAGIDQTALHKHLPDEQPAIWWTHFHAMGDPVTLARKLKTVL 193 Query 173 DATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAV 232 + + PPPA P+D+D +D+ LGRKG +G + K+ + R+D I+ GHVLP Sbjct 194 EVSGNPIAVPPPAETRPIDLDTTTIDRELGRKGVAEGRIYKFFLSRRDRILSHGHVLPG- 252 Query 233 SLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLF 292 + + T I FQ +G+ +AAINGDF+L A EVQ V+RA+R I +VELHNH L E+PR+F Sbjct 253 PIGVNTAIKFQAIGKKQAAINGDFVLRADEVQPVVRALRKHGIRLVELHNHMLDEQPRMF 312 Query 293 YMHYWAVDDAVTLARALRPAMDATNL 318 ++H+WAV D LARALRPA+DAT+L Sbjct 313 FLHFWAVGDGNELARALRPALDATDL 338 >gi|111025515|ref|YP_707935.1| hypothetical protein RHA1_ro08733 [Rhodococcus jostii RHA1] gi|110824494|gb|ABG99777.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=227 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 146/232 (63%), Positives = 183/232 (79%), Gaps = 7/232 (3%) Query 89 IKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDP 148 +KPGLSLGGY AFA YD ++TL+MGDLV+TE+ELP+VTDAL+AHGIAQTA+H L+Q P Sbjct 1 MKPGLSLGGYVAFAWYD-DDTLVMGDLVVTEDELPQVTDALEAHGIAQTAIHNRPLEQTP 59 Query 149 PVWWTHIHGMGDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQD 208 PVWWT +H MGD A LA+G++AALD T I PPTPPPA+QPPVD+D ALGR GT D Sbjct 60 PVWWTRVHAMGDPADLARGIRAALDVTAIAPPTPPPAQQPPVDLDT-----ALGRHGTAD 114 Query 209 GGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIR 268 GG+ K +I R+DTI ++GH+LP + +TT +NFQPVG GRAA+NGD ++ APEVQ VI Sbjct 115 GGIYKLTIGRRDTIEDNGHLLPP-TFGVTTALNFQPVGGGRAAVNGDIVMTAPEVQNVIE 173 Query 269 AMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNLQS 320 A+RAG I +VE+HNH L E+P LFY+H+WAV DA LA LR A+D TN+ + Sbjct 174 ALRAGGIDVVEVHNHSLDEQPGLFYLHFWAVGDAPALAATLRIAVDTTNITA 225 >gi|337768783|emb|CCB77496.1| conserved exported protein of unknown function [Streptomyces cattleya NRRL 8057] Length=353 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 135/275 (50%), Positives = 178/275 (65%), Gaps = 6/275 (2%) Query 46 TTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYD 105 TT+ADW PVA ALGR G L D T + + LPR DL++T++GV + L+L G AAF RY Sbjct 71 TTEADWAPVAQALGRHGVLRDKVT-FGVLLPRGDLNVTTHGVTVVAPLALAGSAAFVRYC 129 Query 106 NNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLA 165 + T+LMGDLV+T +E+ + DAL A GI TALHKHL +++PP WW H H MGD LA Sbjct 130 DG-TMLMGDLVLTADEVDRTVDALHAAGIEMTALHKHLAEENPPTWWVHFHAMGDPVALA 188 Query 166 QGLKAALDATTIGPPTPPPARQP--PVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTII 223 +GLK L A T P P + P P+++D A +D+ LGRKGT G + + R+ ++ Sbjct 189 RGLKQVL-AVTATPAAVPHRQDPARPLELDTAAIDRELGRKGTVAGSVYVVFVDRRRPVV 247 Query 224 EDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNH 283 GHVLP S T + FQ +G+ +AA+NGD IL A EVQ A+RA I +VELHNH Sbjct 248 MHGHVLPG-STGCNTALMFQSLGKDQAAVNGDLILTADEVQPAAHALRAHGIRLVELHNH 306 Query 284 GLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNL 318 L E P +F++H+WA +A LARALR A+D T L Sbjct 307 MLDERPHVFFLHFWATGNATDLARALRAALDTTRL 341 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/81 (40%), Positives = 48/81 (60%), Gaps = 0/81 (0%) Query 101 FARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGD 160 F ++ + GDL++T +E+ AL+AHGI LH H+L + P V++ H G+ Sbjct 265 FQSLGKDQAAVNGDLILTADEVQPAAHALRAHGIRLVELHNHMLDERPHVFFLHFWATGN 324 Query 161 AARLAQGLKAALDATTIGPPT 181 A LA+ L+AALD T + PPT Sbjct 325 ATDLARALRAALDTTRLAPPT 345 >gi|254387982|ref|ZP_05003219.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294817529|ref|ZP_06776171.1| Lipoprotein lpqO [Streptomyces clavuligerus ATCC 27064] gi|197701706|gb|EDY47518.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294322344|gb|EFG04479.1| Lipoprotein lpqO [Streptomyces clavuligerus ATCC 27064] Length=349 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 139/276 (51%), Positives = 181/276 (66%), Gaps = 5/276 (1%) Query 44 VTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFAR 103 V + ADW VA LGR G L T Y R+DL + S+GV + PGL+LG + AFAR Sbjct 66 VPSAKADWAAVARVLGRDGSLLRGVT-YHTAFNRSDLRVFSHGVRVTPGLALGSHVAFAR 124 Query 104 YDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMG-DAA 162 Y + T+ MGD+V+TE+EL VTDA Q HGIAQTA+HKHLL P +WWTHIH G D Sbjct 125 YADGSTMAMGDIVVTEDELQAVTDAFQRHGIAQTAIHKHLLAHHPDIWWTHIHAHGKDPV 184 Query 163 RLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTI 222 +A+G++A LD T P P P P+D+D G+D ALG KG+ G+ K + R + + Sbjct 185 AIARGVRAGLDRTAT--PPPAPPPTGPIDLDTDGIDTALGIKGSGVDGIYKAAFIRAEKV 242 Query 223 IEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHN 282 ++ VLP L TT FQPVG GRAA++GD + A EV +VI A+R G I++VELHN Sbjct 243 VDSHLVLPP-GLGATTAFVFQPVGGGRAALHGDCAVTADEVDDVIGALRRGGISLVELHN 301 Query 283 HGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNL 318 H L + PRLF++H+WAVDDAV +ARALR +D TN+ Sbjct 302 HHLRDTPRLFFIHFWAVDDAVRIARALRRTVDVTNV 337 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/138 (32%), Positives = 63/138 (46%), Gaps = 4/138 (2%) Query 48 DADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNN 107 D D + ALG G D Y+ R + + S+ V + PGL F Sbjct 211 DLDTDGIDTALGIKGSGVDG--IYKAAFIRAEKVVDSHLV-LPPGLGATTAFVFQPVGGG 267 Query 108 ETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQG 167 L GD +T +E+ V AL+ GI+ LH H L+ P +++ H + DA R+A+ Sbjct 268 RAALHGDCAVTADEVDDVIGALRRGGISLVELHNHHLRDTPRLFFIHFWAVDDAVRIARA 327 Query 168 LKAALDAT-TIGPPTPPP 184 L+ +D T I PP PP Sbjct 328 LRRTVDVTNVIAPPESPP 345 >gi|326446146|ref|ZP_08220880.1| hypothetical protein SclaA2_34007 [Streptomyces clavuligerus ATCC 27064] Length=311 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 139/276 (51%), Positives = 181/276 (66%), Gaps = 5/276 (1%) Query 44 VTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFAR 103 V + ADW VA LGR G L T Y R+DL + S+GV + PGL+LG + AFAR Sbjct 28 VPSAKADWAAVARVLGRDGSLLRGVT-YHTAFNRSDLRVFSHGVRVTPGLALGSHVAFAR 86 Query 104 YDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMG-DAA 162 Y + T+ MGD+V+TE+EL VTDA Q HGIAQTA+HKHLL P +WWTHIH G D Sbjct 87 YADGSTMAMGDIVVTEDELQAVTDAFQRHGIAQTAIHKHLLAHHPDIWWTHIHAHGKDPV 146 Query 163 RLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTI 222 +A+G++A LD T P P P P+D+D G+D ALG KG+ G+ K + R + + Sbjct 147 AIARGVRAGLDRTAT--PPPAPPPTGPIDLDTDGIDTALGIKGSGVDGIYKAAFIRAEKV 204 Query 223 IEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHN 282 ++ VLP L TT FQPVG GRAA++GD + A EV +VI A+R G I++VELHN Sbjct 205 VDSHLVLPP-GLGATTAFVFQPVGGGRAALHGDCAVTADEVDDVIGALRRGGISLVELHN 263 Query 283 HGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNL 318 H L + PRLF++H+WAVDDAV +ARALR +D TN+ Sbjct 264 HHLRDTPRLFFIHFWAVDDAVRIARALRRTVDVTNV 299 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/138 (32%), Positives = 63/138 (46%), Gaps = 4/138 (2%) Query 48 DADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNN 107 D D + ALG G D Y+ R + + S+ V + PGL F Sbjct 173 DLDTDGIDTALGIKGSGVDG--IYKAAFIRAEKVVDSHLV-LPPGLGATTAFVFQPVGGG 229 Query 108 ETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQG 167 L GD +T +E+ V AL+ GI+ LH H L+ P +++ H + DA R+A+ Sbjct 230 RAALHGDCAVTADEVDDVIGALRRGGISLVELHNHHLRDTPRLFFIHFWAVDDAVRIARA 289 Query 168 LKAALDAT-TIGPPTPPP 184 L+ +D T I PP PP Sbjct 290 LRRTVDVTNVIAPPESPP 307 >gi|94970469|ref|YP_592517.1| protein of unknown function LppY and LpqO [Candidatus Koribacter versatilis Ellin345] gi|94552519|gb|ABF42443.1| protein of unknown function LppY and LpqO [Candidatus Koribacter versatilis Ellin345] Length=295 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 129/270 (48%), Positives = 175/270 (65%), Gaps = 6/270 (2%) Query 51 WKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETL 110 WKPVADALGRSGK Y++ LPR D+H+T GV +KP L+LG + AF + +E + Sbjct 23 WKPVADALGRSGK-EQPGGVYKVGLPRGDMHVTVNGVALKPALALGSWLAF-KSMGSEMM 80 Query 111 LMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKA 170 +MGDLV++E+E+ V LQ GI QTALH H+L + P V + HI G GD A+LA L Sbjct 81 VMGDLVLSEDEVEPVMLKLQQSGIEQTALHNHVLHESPRVMYMHISGHGDGAKLAAALHD 140 Query 171 ALDATTIGPPTPPPA---RQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGH 227 A+ T P + ++ID V ALGRKG + G++++S+PR + I++ Sbjct 141 AIALTKTPTPPTGATPAAKPDGLEIDSEAVSSALGRKGNVNSGVLQFSVPRAEKIMDGST 200 Query 228 VLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTE 287 +P S+ T INFQP G G+AAI GDF+LIA EV VIRA+R G I + +H+H LTE Sbjct 201 EIPP-SMGTATAINFQPTGGGKAAITGDFVLIASEVNPVIRALRGGGIEVTAVHSHMLTE 259 Query 288 EPRLFYMHYWAVDDAVTLARALRPAMDATN 317 EPRLF+MH+WA DDA+ LA+ L+ A+D TN Sbjct 260 EPRLFFMHFWANDDALKLAKTLKSAIDNTN 289 >gi|337763068|emb|CCB71776.1| conserved exported protein of unknown function [Streptomyces cattleya NRRL 8057] Length=474 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 130/283 (46%), Positives = 178/283 (63%), Gaps = 17/283 (6%) Query 46 TTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYD 105 TT+ADW V++ LGR G + D+ T + LPR+DL +T++GV + P L+L G AAF RY Sbjct 94 TTEADWTTVSEILGRKGAVRDHVT-FGFLLPRDDLRVTTHGVTVVPPLALAGSAAFVRYC 152 Query 106 NNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLA 165 + T+LMGDLV+T +E+ DAL+A GI QTALHKHL ++ PP+WW H H MG+ LA Sbjct 153 DG-TMLMGDLVLTADEVDPTIDALRAAGIEQTALHKHLSEETPPLWWVHFHAMGEPESLA 211 Query 166 QGLKAALDATTIGPP----------TPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYS 215 LK L+ G P T PAR P ++D +D+ LGRKG ++G + Sbjct 212 HRLKRVLEVG--GSPARHRPENQDTTHEPARSP--ELDTLAIDRELGRKGNREGKVYLVF 267 Query 216 IPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNI 275 + R+ + GHVLP S+ T I FQ +GRG+ A NGD IL A EVQ +RA+R I Sbjct 268 VSRRKPVTVHGHVLPG-SIGCNTAIMFQALGRGKVAANGDLILTANEVQPAMRALREHGI 326 Query 276 TIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNL 318 +VELHNH L E+PR+F++H+WAV DA +AR LR +D ++ Sbjct 327 RLVELHNHMLDEQPRVFFLHFWAVGDAAEVARGLRAGLDTADM 369 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/72 (42%), Positives = 43/72 (60%), Gaps = 0/72 (0%) Query 113 GDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAAL 172 GDL++T E+ AL+ HGI LH H+L + P V++ H +GDAA +A+GL+A L Sbjct 305 GDLILTANEVQPAMRALREHGIRLVELHNHMLDEQPRVFFLHFWAVGDAAEVARGLRAGL 364 Query 173 DATTIGPPTPPP 184 D + PP P Sbjct 365 DTADMAPPRKEP 376 >gi|182679065|ref|YP_001833211.1| hypothetical protein Bind_2102 [Beijerinckia indica subsp. indica ATCC 9039] gi|182634948|gb|ACB95722.1| protein of unknown function LppY and LpqO [Beijerinckia indica subsp. indica ATCC 9039] Length=294 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 123/274 (45%), Positives = 172/274 (63%), Gaps = 6/274 (2%) Query 50 DWKPVADALGRSG-KLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNE 108 DW VA ALG+SG +L + YR+ LPR+DL IT GV IKP L+LG + AF R + +E Sbjct 25 DWGAVARALGKSGTELPEG--VYRVGLPRSDLEITVDGVTIKPALALGSWLAF-RENGDE 81 Query 109 TLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGL 168 ++MGDLV+T++E V +L I TALH HLL+ +P + HI G GDA RLA+ L Sbjct 82 AMVMGDLVLTQDEANPVMKSLAESRIEITALHNHLLRAEPMPLYMHIAGHGDAVRLAEAL 141 Query 169 KAALDATTIGPPTPPPARQP-PVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGH 227 AL + PP QP +++D +D+ LG +G +GG+ +++I R + I + G Sbjct 142 HKALAMSKTPLEAAPPGAQPQALELDTTALDKLLGAQGKANGGVYQFTIARAEMITDGGM 201 Query 228 VLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTE 287 +PA S+ INFQP+G GRAAI GDF+LIA EV V+ +R I + +HNH L + Sbjct 202 NIPA-SMGSGIAINFQPMGNGRAAITGDFVLIASEVNPVLLVLRENGIEVTAIHNHMLDD 260 Query 288 EPRLFYMHYWAVDDAVTLARALRPAMDATNLQSS 321 +PRLF+MH+WA DDA+ LAR L+ A+ N+ S Sbjct 261 QPRLFFMHFWAADDAIKLARGLKEALGKVNIAKS 294 >gi|182679473|ref|YP_001833619.1| hypothetical protein Bind_2528 [Beijerinckia indica subsp. indica ATCC 9039] gi|182635356|gb|ACB96130.1| protein of unknown function LppY and LpqO [Beijerinckia indica subsp. indica ATCC 9039] Length=294 Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 117/282 (42%), Positives = 171/282 (61%), Gaps = 6/282 (2%) Query 42 SAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAF 101 SA D DW + ALG++G YR+ L R+DL +T GV+IKP L+LG + F Sbjct 17 SAPACADPDWNAIGQALGKAGAELPGGL-YRVPLARSDLKVTLAGVEIKPALALGSWLTF 75 Query 102 ARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDA 161 + + ++MGDLV+T++E+ V L GI TALH HLL P + HI G GD Sbjct 76 -QPAGKDAMVMGDLVLTQDEVAPVMKRLGEGGIEITALHNHLLHSQPLTMYMHIEGHGDP 134 Query 162 ARLAQGLKAAL--DATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRK 219 +LA+ L AAL T +GP + P A Q +D+D + +D+ LG G +GG+ +++IPR Sbjct 135 LKLAEALHAALVLSKTPLGPASAPAAPQT-IDLDTSALDKLLGHAGKANGGVYQFTIPRA 193 Query 220 DTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVE 279 + I + G +P V++ INFQP G+G+AAI GDF+LI EV V+R ++ I + Sbjct 194 EAITDGGMAVP-VAMGTGIAINFQPTGKGKAAITGDFVLIGSEVNPVLRTLQENGIEVTA 252 Query 280 LHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNLQSS 321 +HNH L ++PRLF++H+WA DDA+ LA L+ A+D N+ S Sbjct 253 VHNHMLDDQPRLFFLHFWANDDAIKLAGGLKAALDKVNIAKS 294 >gi|148255054|ref|YP_001239639.1| hypothetical protein BBta_3649 [Bradyrhizobium sp. BTAi1] gi|146407227|gb|ABQ35733.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length=303 Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 121/277 (44%), Positives = 168/277 (61%), Gaps = 5/277 (1%) Query 42 SAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAF 101 SA D DW+ V + LGR + D+ +R + PR DL +T GV IKP L+LGG+ AF Sbjct 25 SAAHAQDVDWQKVDETLGRKPAVSDD--VHRYSFPRTDLAVTLDGVPIKPALALGGWIAF 82 Query 102 ARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDA 161 + + ++MGDLV+ E E+ V + A G+ TA+H HLL+ +P ++ H+ G G+ Sbjct 83 -KPAHGGAMVMGDLVLLETEINPVMAKMIASGLEITAVHNHLLRANPATFYMHVAGHGEP 141 Query 162 ARLAQGLKAALDATTIGPPTPPPA-RQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKD 220 RLA + AL + P P P VD+D A +DQ +G KG +GG+ +YS+ R+D Sbjct 142 VRLASAIHDALAESKTPLVVPAPTGPSPAVDLDTAKLDQIIGVKGQANGGVYQYSVKRRD 201 Query 221 TIIEDGHVL-PAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVE 279 I +DG L P ++ + INFQP G G+AAI GDF+L EV VI A+RA I + Sbjct 202 AITQDGTPLTPVGAMGVAIGINFQPTGAGKAAITGDFVLTGDEVNPVILALRAHGIEVTA 261 Query 280 LHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 LH+H L E+PRLF+MH+WA DDAV LA LR A+D T Sbjct 262 LHSHMLDEQPRLFFMHFWANDDAVKLAEGLRAALDKT 298 >gi|188581147|ref|YP_001924592.1| hypothetical protein Mpop_1894 [Methylobacterium populi BJ001] gi|179344645|gb|ACB80057.1| protein of unknown function LppY and LpqO [Methylobacterium populi BJ001] Length=319 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 127/299 (43%), Positives = 177/299 (60%), Gaps = 28/299 (9%) Query 42 SAVTTTDADWK-PVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAA 100 S+V T W+ +A LG+ G YR+ LPR DL +T GV +KP L+LG + A Sbjct 16 SSVATAAEPWQDAIATGLGKPGTAMPGGV-YRVGLPRTDLKVTLDGVQLKPALALGSWLA 74 Query 101 FARY-DNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMG 159 F ++ D NE ++MGDLV+TE+E+ V L +G+ TA+H HLL+ P + H+ G G Sbjct 75 FVKHGDGNEVMVMGDLVLTEDEVNPVMKRLVENGVEITAIHNHLLRASPSTLYMHVSGQG 134 Query 160 DAARLAQGLKAALDAT-------TIG--PPT----PPPARQPPV-----------DIDVA 195 + +LA+ L+ AL A+ T G PP+ P A + PV D+D A Sbjct 135 EPGKLAETLRQALGASRTPFGGATAGGTPPSRKTEPASAGEGPVPAKATAPDQALDLDTA 194 Query 196 GVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGD 255 +D A+GRKG +GG+ S+PR +T + G V+P ++ INFQP G G+AAI GD Sbjct 195 AIDAAIGRKGKVNGGVYAVSVPRSETPKDHGMVVPE-AMGSAIAINFQPTGGGKAAITGD 253 Query 256 FILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMD 314 F+L A EV VI+A+RA I + LHNH L +EPRLF+MH+WA DDA LA+ LR A+D Sbjct 254 FVLTAEEVNPVIKALRASGIEVTALHNHMLDDEPRLFFMHFWANDDAGKLAKGLRDALD 312 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 36/118 (31%), Positives = 54/118 (46%), Gaps = 2/118 (1%) Query 201 LGRKGT-QDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRG-RAAINGDFIL 258 LG+ GT GG+ + +PR D + V +L L + + F G G + GD +L Sbjct 33 LGKPGTAMPGGVYRVGLPRTDLKVTLDGVQLKPALALGSWLAFVKHGDGNEVMVMGDLVL 92 Query 259 IAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 EV V++ + + I +HNH L P YMH + LA LR A+ A+ Sbjct 93 TEDEVNPVMKRLVENGVEITAIHNHLLRASPSTLYMHVSGQGEPGKLAETLRQALGAS 150 >gi|27383178|ref|NP_774707.1| hypothetical protein bll8067 [Bradyrhizobium japonicum USDA 110] gi|27356352|dbj|BAC53332.1| bll8067 [Bradyrhizobium japonicum USDA 110] Length=385 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 117/272 (44%), Positives = 169/272 (63%), Gaps = 11/272 (4%) Query 50 DWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNET 109 DW+ V + LGR + D+ +R PR+DL ++ GV IKP L+LGG+ AF + + Sbjct 115 DWQKVDETLGRKAAVSDD--VHRYGFPRSDLSVSLDGVTIKPSLALGGWVAF-KPGHGGA 171 Query 110 LLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLK 169 ++MGDLV+ E E+ V + A+G+ TA+H HLL+ P ++ H+ G GD +L+ + Sbjct 172 MVMGDLVLLETEINPVMAKMIANGLEITAVHNHLLRASPATFYMHVAGHGDPVKLSSAIH 231 Query 170 AALDAT----TIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIED 225 AL + T+G P PP P VD+D A +DQ +G KG +GG+ ++++ R+D I ++ Sbjct 232 DALAESKTPLTVGAPASPP---PAVDLDTAKLDQIIGVKGQANGGVYQFNVKRRDPITQE 288 Query 226 GHVL-PAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHG 284 G L P + + INFQP G GRAAI GDF+L EV VI A+RA I + LH+H Sbjct 289 GMPLTPVGPMGVAIGINFQPTGGGRAAITGDFVLTGDEVNPVILALRAHGIEVTALHSHM 348 Query 285 LTEEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 L E+PRLF+MH+WA DDAV LA+ LR A+D T Sbjct 349 LDEQPRLFFMHFWASDDAVKLAKGLRAALDKT 380 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/122 (36%), Positives = 59/122 (49%), Gaps = 1/122 (0%) Query 192 IDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAA 251 ID VD+ LGRK + +Y PR D + V SL L + F+P G G A Sbjct 114 IDWQKVDETLGRKAAVSDDVHRYGFPRSDLSVSLDGVTIKPSLALGGWVAFKP-GHGGAM 172 Query 252 INGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRP 311 + GD +L+ E+ V+ M A + I +HNH L P FYMH D V L+ A+ Sbjct 173 VMGDLVLLETEINPVMAKMIANGLEITAVHNHLLRASPATFYMHVAGHGDPVKLSSAIHD 232 Query 312 AM 313 A+ Sbjct 233 AL 234 >gi|27378194|ref|NP_769723.1| hypothetical protein blr3083 [Bradyrhizobium japonicum USDA 110] gi|27351341|dbj|BAC48348.1| blr3083 [Bradyrhizobium japonicum USDA 110] Length=317 Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 116/271 (43%), Positives = 165/271 (61%), Gaps = 5/271 (1%) Query 48 DADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNN 107 D DW+ V DALGR + + +R PR DL +T GV IKP L+LGG+ AF + + Sbjct 45 DVDWQKVDDALGRKPAVAGD--VHRYGFPRTDLTVTLDGVTIKPSLALGGWVAF-KPAHG 101 Query 108 ETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQG 167 + MGDLV+ E E+ V + G+ TA+H HLL P ++ H+ G GD ++A Sbjct 102 AVMAMGDLVLLESEINPVMQKMIESGLEITAVHNHLLGAVPATFYMHVAGHGDPLKIATA 161 Query 168 LKAAL-DATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDG 226 +K AL ++ T P P +D+D A +DQ +G KG +GG+ ++++PR+D I E G Sbjct 162 IKTALAESKTPMSAPAPAVPPPAIDLDTAKLDQIIGVKGQANGGVYQFNVPRRDPITEHG 221 Query 227 HVL-PAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGL 285 L P + + T +NFQP G GRAAI GDF+LI EV VI A+R+ I++ LH+H L Sbjct 222 MQLSPVGPMGVATGVNFQPTGGGRAAITGDFVLIGDEVNPVIMALRSHGISVTALHSHML 281 Query 286 TEEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 E+PRLF+MH+WA DDA+ LA +R A+D T Sbjct 282 DEQPRLFFMHFWANDDAIKLANGVRAALDKT 312 >gi|85717674|ref|ZP_01048611.1| LpqO protein-like [Nitrobacter sp. Nb-311A] gi|85695497|gb|EAQ33418.1| LpqO protein-like [Nitrobacter sp. Nb-311A] Length=285 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 116/270 (43%), Positives = 164/270 (61%), Gaps = 7/270 (2%) Query 50 DWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNET 109 DW V LGR+ + ++ +R PR DL +T GV IKP L+LGG+ AF + + Sbjct 15 DWGKVDGILGRNPAVTED--VHRYGFPRTDLTVTLDGVTIKPALALGGWIAF-KQAHEGA 71 Query 110 LLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLK 169 + MGDLV+ E E+ V + A G+ TA+H HLL+ P ++ H+ G GD A+LA L Sbjct 72 MAMGDLVLLESEINPVMLKMIAGGLEITAIHNHLLRASPATFYMHVAGHGDPAKLATALH 131 Query 170 AALDATTIGPPTPPPARQPP--VDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGH 227 AL A + P P+ PP VD+D A +DQ +G KG +GG+ ++++PR+D + E G Sbjct 132 DAL-AESKTPLQATPSSNPPPAVDLDTAQLDQIIGVKGKTNGGVYQFNVPRRDPVSEGGM 190 Query 228 VL-PAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLT 286 L PA + + INFQP G G+AA GDF+L EV V+ A+R I + LH+H L Sbjct 191 TLTPAGPMGVAIGINFQPTGGGKAATTGDFVLTGDEVNPVVAALRTHGIEVTALHSHMLD 250 Query 287 EEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 E+PRLF+MH+WA DDA+ LA+ LR A+D T Sbjct 251 EQPRLFFMHFWANDDAIKLAKGLRAALDKT 280 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/132 (34%), Positives = 60/132 (46%), Gaps = 3/132 (2%) Query 192 IDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAA 251 +D VD LGR + +Y PR D + V +L L I F+ G A Sbjct 14 VDWGKVDGILGRNPAVTEDVHRYGFPRTDLTVTLDGVTIKPALALGGWIAFKQAHEGAMA 73 Query 252 INGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRP 311 + GD +L+ E+ V+ M AG + I +HNH L P FYMH D LA AL Sbjct 74 M-GDLVLLESEINPVMLKMIAGGLEITAIHNHLLRASPATFYMHVAGHGDPAKLATALHD 132 Query 312 AM--DATNLQSS 321 A+ T LQ++ Sbjct 133 ALAESKTPLQAT 144 >gi|170744209|ref|YP_001772864.1| hypothetical protein M446_6160 [Methylobacterium sp. 4-46] gi|168198483|gb|ACA20430.1| protein of unknown function LppY and LpqO [Methylobacterium sp. 4-46] Length=309 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 115/282 (41%), Positives = 161/282 (58%), Gaps = 19/282 (6%) Query 54 VADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMG 113 +A LG++G YR+ LPR DL +T GV +KP +LG + AF + N+ ++MG Sbjct 26 IASGLGKAGTEMPGGV-YRVGLPRTDLKVTLDGVTLKPTFALGSWLAFRKVGENQAMVMG 84 Query 114 DLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALD 173 DLV+TE+E+ V L G+ TALH HLL+ P + H+ G G+ +LA L AL Sbjct 85 DLVLTEDEVNPVMARLLEGGVEITALHNHLLRSSPSTLYMHVSGHGEPGKLATTLMGALG 144 Query 174 ATTI-------------GPPTPPPARQPPVD----IDVAGVDQALGRKGTQDGGLMKYSI 216 A+ G P+P PA+ P D +D A +D ALGRKG +GG+ S+ Sbjct 145 ASRTPFGAETAAGTPPAGNPSPAPAQATPADQTPNLDTAAIDAALGRKGKLNGGVYAVSV 204 Query 217 PRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNIT 276 PR +T + G +P ++ INFQP G G+AAI GDF+L A EV V+ A+R I Sbjct 205 PRAETPKDHGMEVPE-AMGSAIAINFQPTGSGKAAITGDFVLTAKEVNPVLAALRQNGIE 263 Query 277 IVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNL 318 + LHNH L +EPRLF+MH+WA D+A LA+ L A+ N+ Sbjct 264 VTALHNHMLDDEPRLFFMHFWANDNAGKLAKGLNEALKHINV 305 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/176 (31%), Positives = 85/176 (49%), Gaps = 10/176 (5%) Query 11 VAITTAAAVILAACSSGSKGGAGSGHAGKARSA-VTTTDADWKPVAD------ALGRSGK 63 +A T A+ + G++ AG+ AG A T AD P D ALGR GK Sbjct 135 LATTLMGALGASRTPFGAETAAGTPPAGNPSPAPAQATPADQTPNLDTAAIDAALGRKGK 194 Query 64 LGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELP 123 L N Y +++PR + +G+++ + F + + + GD V+T +E+ Sbjct 195 L--NGGVYAVSVPRAETP-KDHGMEVPEAMGSAIAINFQPTGSGKAAITGDFVLTAKEVN 251 Query 124 KVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGP 179 V AL+ +GI TALH H+L +P +++ H +A +LA+GL AL + P Sbjct 252 PVLAALRQNGIEVTALHNHMLDDEPRLFFMHFWANDNAGKLAKGLNEALKHINVAP 307 >gi|85715795|ref|ZP_01046774.1| hypothetical protein NB311A_13461 [Nitrobacter sp. Nb-311A] gi|85697448|gb|EAQ35327.1| hypothetical protein NB311A_13461 [Nitrobacter sp. Nb-311A] Length=300 Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 116/270 (43%), Positives = 164/270 (61%), Gaps = 7/270 (2%) Query 50 DWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNET 109 DW V LGR + ++ +R R DL +T GV IKP L+LGG+ AF + ++ Sbjct 30 DWGKVDGILGRKPAVTED--VHRYGFSRTDLTVTLDGVTIKPALALGGWIAF-KQAHDGA 86 Query 110 LLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLK 169 + MGDLV+ E E+ V + A G+ TA+H HLL+ P ++ H+ G GD A+LA L Sbjct 87 MAMGDLVLLESEINPVMLKMIAGGLEITAIHNHLLRATPATFYMHVAGHGDPAKLATVLH 146 Query 170 AALDATTIGPPTPPPARQPP--VDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGH 227 AL A + P P+ PP VD+D A +DQ +G KG +GG+ ++++PR+D + E G Sbjct 147 DAL-AESKTPLQATPSSNPPPAVDLDTAQLDQIIGVKGKTNGGVYQFNVPRRDPVSEGGM 205 Query 228 VL-PAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLT 286 L PA + + INFQP G G+AAI GDF+L EV V+ A+R I + LH+H L Sbjct 206 TLTPAGPMGVAIGINFQPTGGGKAAITGDFVLTGDEVNPVVAALRTHGIEVTALHSHMLD 265 Query 287 EEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 E+PRLF+MH+WA DDA+ LA+ LR A+D T Sbjct 266 EQPRLFFMHFWANDDAIKLAKGLRAALDKT 295 >gi|218532625|ref|YP_002423441.1| hypothetical protein Mchl_4739 [Methylobacterium chloromethanicum CM4] gi|218524928|gb|ACK85513.1| protein of unknown function LppY and LpqO [Methylobacterium chloromethanicum CM4] Length=320 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 118/287 (42%), Positives = 163/287 (57%), Gaps = 28/287 (9%) Query 54 VADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDN-NETLLM 112 +A LG+ G YR+ LPR DL++T GV +KP +LG + AF ++ +E ++M Sbjct 29 IATGLGKPGTTMPGGV-YRVGLPRTDLNVTLDGVQLKPSFALGSWLAFVKHGGGDEVMVM 87 Query 113 GDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAAL 172 GDLV+T++E+ V L G+ TALH HLL+ P + H+ G GDA +LA L+ AL Sbjct 88 GDLVLTDDEVNPVMKRLVEGGLEITALHNHLLRNTPHTMYMHVGGHGDAGKLATTLREAL 147 Query 173 DATTI--------------GPPTPPPARQPPV-----------DIDVAGVDQALGRKGTQ 207 A+ G P A + PV D+D A +D ALGRKG Sbjct 148 GASKTPFGGATAGATPPKAGSAEPASAGEGPVPAKATAPDQALDLDTAAIDAALGRKGKV 207 Query 208 DGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVI 267 +GG+ S+PR +T + G +P ++ INFQP G G+AAI GDF+L A EV VI Sbjct 208 NGGVYAVSVPRAETPKDHGMEVPE-AMGSAIAINFQPTGGGKAAITGDFVLTADEVNPVI 266 Query 268 RAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMD 314 +A+R I + LHNH L +EPRLF+MH+WA DDA LA+ LR A+D Sbjct 267 KALRGNGIEVTALHNHMLDDEPRLFFMHFWANDDAGKLAKGLRDALD 313 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 43/139 (31%), Positives = 71/139 (52%), Gaps = 3/139 (2%) Query 39 KARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGY 98 KA + D D + ALGR GK+ N Y +++PR + +G+++ + Sbjct 182 KATAPDQALDLDTAAIDAALGRKGKV--NGGVYAVSVPRAETP-KDHGMEVPEAMGSAIA 238 Query 99 AAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGM 158 F + + GD V+T +E+ V AL+ +GI TALH H+L +P +++ H Sbjct 239 INFQPTGGGKAAITGDFVLTADEVNPVIKALRGNGIEVTALHNHMLDDEPRLFFMHFWAN 298 Query 159 GDAARLAQGLKAALDATTI 177 DA +LA+GL+ ALD + Sbjct 299 DDAGKLAKGLRDALDQVKV 317 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/119 (34%), Positives = 55/119 (47%), Gaps = 2/119 (1%) Query 201 LGRKGT-QDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRG-RAAINGDFIL 258 LG+ GT GG+ + +PR D + V S L + + F G G + GD +L Sbjct 33 LGKPGTTMPGGVYRVGLPRTDLNVTLDGVQLKPSFALGSWLAFVKHGGGDEVMVMGDLVL 92 Query 259 IAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATN 317 EV V++ + G + I LHNH L P YMH DA LA LR A+ A+ Sbjct 93 TDDEVNPVMKRLVEGGLEITALHNHLLRNTPHTMYMHVGGHGDAGKLATTLREALGASK 151 >gi|345138082|dbj|BAK67691.1| hypothetical protein SLG_30160 [Sphingobium sp. SYK-6] Length=297 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 111/247 (45%), Positives = 151/247 (62%), Gaps = 6/247 (2%) Query 71 YRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDALQ 130 YRI LPR+DL +T GV +KP L+L + AF + N+ ++MGDLV+T+ E+ V L Sbjct 45 YRIGLPRSDLKVTLDGVTLKPALALSSWLAFVGHGQNQVMVMGDLVLTDTEVNPVMAKLI 104 Query 131 AHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDAT----TIGPPTPPPAR 186 A GI TALH HLL+ P + HI G GD ARLA+ + AL + ++ P T P A Sbjct 105 AGGIEITALHNHLLRNTPHTMYMHIAGHGDPARLARTVHDALALSGTPLSVAPATNPAAP 164 Query 187 QPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVG 246 + +D+D A +D+ L KG GG+ + IPR +T + G LP ++ INFQP G Sbjct 165 E-TLDLDTAALDRLLRHKGKVGGGVYAFGIPRAETPRDGGMALPP-AMGAAIAINFQPTG 222 Query 247 RGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLA 306 G+AAI GDF+L A EV V++ +R I + LHNH L +EPRLF+MH+WA DDA LA Sbjct 223 GGKAAITGDFVLTAAEVNPVLKTLRENGIEVTALHNHMLDDEPRLFFMHFWANDDAQKLA 282 Query 307 RALRPAM 313 R L A+ Sbjct 283 RGLAAAL 289 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/139 (31%), Positives = 63/139 (46%), Gaps = 9/139 (6%) Query 42 SAVTTTDADWKPVADALGRSGKLGDNNTAY---RINLPRNDLHITSYGVDIKPGLSLGGY 98 +A T D D + L GK+G A+ R PR+ G+ + P + Sbjct 162 AAPETLDLDTAALDRLLRHKGKVGGGVYAFGIPRAETPRDG------GMALPPAMGAAIA 215 Query 99 AAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGM 158 F + + GD V+T E+ V L+ +GI TALH H+L +P +++ H Sbjct 216 INFQPTGGGKAAITGDFVLTAAEVNPVLKTLRENGIEVTALHNHMLDDEPRLFFMHFWAN 275 Query 159 GDAARLAQGLKAALDATTI 177 DA +LA+GL AAL I Sbjct 276 DDAQKLARGLAAALGHVAI 294 >gi|92117415|ref|YP_577144.1| protein of unknown function LppY and LpqO [Nitrobacter hamburgensis X14] gi|91800309|gb|ABE62684.1| protein of unknown function LppY and LpqO [Nitrobacter hamburgensis X14] Length=296 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 113/276 (41%), Positives = 163/276 (60%), Gaps = 7/276 (2%) Query 48 DADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNN 107 + DW+ V LGR K + +R R+DL +T GV I P L+LGG+ A + + Sbjct 24 EIDWQKVDSTLGR--KPAISGDVHRYGFSRSDLKVTLDGVTIAPALALGGWVAL-KPMHG 80 Query 108 ETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQG 167 + MGDLV+ E E+ V L G+ TA+H HLL+ P ++ H+ G GDA +LA Sbjct 81 GVMAMGDLVLLESEINPVMSKLIEGGLEVTAVHNHLLRATPATFYLHVGGHGDAVKLASA 140 Query 168 LKAALDATTIGPPTPPPARQP--PVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIED 225 + AL A+ P T P A +D+D A +DQ +G KG +GG+ + + R+D + D Sbjct 141 IHDALAASKT-PLTTPAATSSNGAIDLDTARIDQIIGAKGHANGGVYQIGVARRDDVTMD 199 Query 226 GHVL-PAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHG 284 G + PA + + T INFQP G G+AAI GDF+LI EV V+ A+RA I + +H+H Sbjct 200 GMAISPAGPMGVATGINFQPTGAGKAAITGDFVLIDSEVNPVVNALRANGIDVTAVHSHM 259 Query 285 LTEEPRLFYMHYWAVDDAVTLARALRPAMDATNLQS 320 L E+PRLF++H+WA DDA+ LA+ LR A+D T + S Sbjct 260 LDEQPRLFFLHFWANDDAIKLAQGLRSALDKTAVVS 295 >gi|153940690|ref|YP_001390103.1| LysM domain-containing protein [Clostridium botulinum F str. Langeland] gi|152936586|gb|ABS42084.1| LysM domain protein [Clostridium botulinum F str. Langeland] gi|295318196|gb|ADF98573.1| LysM domain protein [Clostridium botulinum F str. 230613] Length=325 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 107/268 (40%), Positives = 156/268 (59%), Gaps = 7/268 (2%) Query 47 TDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDN 106 T+ D + + + + G ++ PR DL + G+ I+P L+L + AF R N Sbjct 62 TNYDLETIKNIFSQEGATAGG--VFKFTFPRFDLEVRIDGIIIEPDLALTSWVAFNRLGN 119 Query 107 NETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQ 166 + +++MGDLV+ E E+ V +L +GI TALH HLL + P + + HI G GD +LAQ Sbjct 120 H-SMMMGDLVLLENEVDPVMSSLIENGIEVTALHNHLLHESPRIMYLHIKGEGDPIKLAQ 178 Query 167 GLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDG 226 +K AL TT P +QPP ID +++ LG KG+ G +++ S+PR I ED Sbjct 179 SVKNALSLTT--TPFNIKKQQPPSQIDWTVIEEILGHKGSHKGKVLQLSVPRTTIISEDA 236 Query 227 HVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLT 286 H L + ++ ++ INFQ VGR A GDF+L+A EV VI ++ NI + +HNH LT Sbjct 237 HQL-SPAMGISHAINFQSVGRN-VATTGDFVLLANEVNPVISILKKNNIAVTAIHNHMLT 294 Query 287 EEPRLFYMHYWAVDDAVTLARALRPAMD 314 E PRLF+MH+WAVD LA+A R +D Sbjct 295 EVPRLFFMHFWAVDKPKKLAQAFRAVLD 322 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/132 (28%), Positives = 67/132 (51%), Gaps = 1/132 (0%) Query 185 ARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQP 244 +R + D+ + ++G GG+ K++ PR D + ++ L LT+ + F Sbjct 57 SRNHRTNYDLETIKNIFSQEGATAGGVFKFTFPRFDLEVRIDGIIIEPDLALTSWVAFNR 116 Query 245 VGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVT 304 +G + + GD +L+ EV V+ ++ I + LHNH L E PR+ Y+H D + Sbjct 117 LG-NHSMMMGDLVLLENEVDPVMSSLIENGIEVTALHNHLLHESPRIMYLHIKGEGDPIK 175 Query 305 LARALRPAMDAT 316 LA++++ A+ T Sbjct 176 LAQSVKNALSLT 187 >gi|170754998|ref|YP_001780388.1| LysM domain-containing protein [Clostridium botulinum B1 str. Okra] gi|169120210|gb|ACA44046.1| LysM domain protein [Clostridium botulinum B1 str. Okra] Length=325 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 101/245 (42%), Positives = 148/245 (61%), Gaps = 5/245 (2%) Query 70 AYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDAL 129 ++ PR DL + G+ I+P L+L + AF + N+ +++MGDLV+ E E+ + +L Sbjct 83 VFKFTFPRFDLKVRIDGIIIEPDLALTSWVAFNQLGNH-SMIMGDLVLLENEVGPIMSSL 141 Query 130 QAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPPTPPPARQPP 189 +GI TALH HLL + P + + HI G GD+ +LA+ +K AL TT P +QPP Sbjct 142 TENGIEVTALHNHLLHESPRIMYLHIKGEGDSIKLAESVKNALSLTT--TPFNIKNQQPP 199 Query 190 VDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGR 249 ID +++ LG KG G +++ S+PR I EDGH L ++ ++ INFQ VGR Sbjct 200 SQIDWTVIEEILGHKGFHKGKVLQLSVPRTTIISEDGHQLSP-AMGISHAINFQSVGRN- 257 Query 250 AAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARAL 309 A GDF+L+A EV VI ++ NI + +HNH LTE PRLF+MH+WAVD LA+A Sbjct 258 VATTGDFVLLANEVNPVISILKKNNIAVTAIHNHMLTEVPRLFFMHFWAVDKPEKLAQAF 317 Query 310 RPAMD 314 R ++ Sbjct 318 RDVLN 322 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/132 (29%), Positives = 67/132 (51%), Gaps = 1/132 (0%) Query 185 ARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQP 244 +R D+ + +KGT GG+ K++ PR D + ++ L LT+ + F Sbjct 57 SRNHRAKYDLETIKNIFSQKGTTAGGVFKFTFPRFDLKVRIDGIIIEPDLALTSWVAFNQ 116 Query 245 VGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVT 304 +G + I GD +L+ EV ++ ++ I + LHNH L E PR+ Y+H D++ Sbjct 117 LG-NHSMIMGDLVLLENEVGPIMSSLTENGIEVTALHNHLLHESPRIMYLHIKGEGDSIK 175 Query 305 LARALRPAMDAT 316 LA +++ A+ T Sbjct 176 LAESVKNALSLT 187 >gi|148378747|ref|YP_001253288.1| LysM domain protein [Clostridium botulinum A str. ATCC 3502] gi|153931890|ref|YP_001383135.1| LysM domain-containing protein [Clostridium botulinum A str. ATCC 19397] gi|153934622|ref|YP_001386683.1| LysM domain-containing protein [Clostridium botulinum A str. Hall] gi|148288231|emb|CAL82304.1| putative peptidoglycan binding protein [Clostridium botulinum A str. ATCC 3502] gi|152927934|gb|ABS33434.1| LysM domain protein [Clostridium botulinum A str. ATCC 19397] gi|152930536|gb|ABS36035.1| LysM domain protein [Clostridium botulinum A str. Hall] Length=325 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 102/243 (42%), Positives = 147/243 (61%), Gaps = 5/243 (2%) Query 72 RINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDALQA 131 + PR DL + G+ I+P L+L + AF + N+ +++MGDLV+ E E+ + +L Sbjct 85 KFTFPRFDLKVRINGIIIEPDLALTSWVAFNQLGNH-SMMMGDLVLLENEVGPIMSSLIE 143 Query 132 HGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPPTPPPARQPPVD 191 +GI TALH HLL + P + + HI G GD +LAQ +K AL TT P +QPP Sbjct 144 NGIEVTALHNHLLHESPRIMYLHIKGEGDPIKLAQSVKNALSLTT--TPFNIKKQQPPSQ 201 Query 192 IDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAA 251 ID ++ LG KG+ G +++ S+PR I EDGH L + ++ ++ INFQ VGR A Sbjct 202 IDWTVIEGILGHKGSHKGKVLQLSVPRTTIISEDGHQL-SPAMGISHAINFQSVGRN-VA 259 Query 252 INGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRP 311 GDF+L+A EV VI ++ NI + +HNH LTE PRLF+MH+WA+D LA+A R Sbjct 260 TTGDFVLLANEVNPVISILKKNNIAVTAIHNHMLTEVPRLFFMHFWAIDKPEKLAQAFRA 319 Query 312 AMD 314 +D Sbjct 320 VLD 322 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/132 (28%), Positives = 68/132 (52%), Gaps = 1/132 (0%) Query 185 ARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQP 244 +R D+ + ++GT GG++K++ PR D + ++ L LT+ + F Sbjct 57 SRNHRAKYDLETIKNIFSQEGTTTGGVLKFTFPRFDLKVRINGIIIEPDLALTSWVAFNQ 116 Query 245 VGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVT 304 +G + + GD +L+ EV ++ ++ I + LHNH L E PR+ Y+H D + Sbjct 117 LG-NHSMMMGDLVLLENEVGPIMSSLIENGIEVTALHNHLLHESPRIMYLHIKGEGDPIK 175 Query 305 LARALRPAMDAT 316 LA++++ A+ T Sbjct 176 LAQSVKNALSLT 187 >gi|220922216|ref|YP_002497518.1| hypothetical protein Mnod_2235 [Methylobacterium nodulans ORS 2060] gi|219946823|gb|ACL57215.1| protein of unknown function LppY and LpqO [Methylobacterium nodulans ORS 2060] Length=320 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 117/291 (41%), Positives = 159/291 (55%), Gaps = 26/291 (8%) Query 54 VADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMG 113 +A LG+ G YR++LPR DL +T GV IKP L+LG + AF + N+ ++MG Sbjct 30 IATGLGKPGTEMPGGV-YRVSLPRTDLAVTLDGVSIKPALALGSWLAFRKAGENQVMVMG 88 Query 114 DLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALD 173 DLV+TE+E+ V L G+ TALH HLL+ P + H+ G G+ +LA L AL Sbjct 89 DLVLTEDEVNPVMTRLVEGGVEITALHNHLLRASPNPLYMHVSGHGEPGKLAATLMGALG 148 Query 174 A--TTIGPPTP---PPA---------------RQPPVD----IDVAGVDQALGRKGTQDG 209 A T G T PPA R D +D A ++ ALGRKG +G Sbjct 149 ASRTPFGAETATGTPPAGHPGPASAGASPAPARATASDQAQPLDTAAIEAALGRKGKLNG 208 Query 210 GLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRA 269 G+ S+PR +T + G +P ++ INFQP G G+AAI GDF+L A EV VI+ Sbjct 209 GVYAVSVPRAETPRDHGMDVPE-AMGSAIAINFQPTGGGKAAITGDFVLTADEVNPVIKT 267 Query 270 MRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNLQS 320 +R I + LHNH L +EPRLF+MH+WA DD LA+ L A+ + S Sbjct 268 LRQNGIEVTALHNHMLGDEPRLFFMHFWANDDTAKLAKGLGAALKHVKVAS 318 >gi|220914849|ref|YP_002490157.1| protein of unknown function LppY and LpqO [Methylobacterium nodulans ORS 2060] gi|219952600|gb|ACL62990.1| protein of unknown function LppY and LpqO [Methylobacterium nodulans ORS 2060] Length=320 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 117/291 (41%), Positives = 158/291 (55%), Gaps = 26/291 (8%) Query 54 VADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMG 113 +A LG+ G YR++LPR DL +T GV IKP L+LG + AF + N+ ++MG Sbjct 30 IATGLGKPGTEMPGGV-YRVSLPRTDLAVTLDGVSIKPALALGSWLAFRKAGENQVMVMG 88 Query 114 DLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALD 173 DLV+TE+E+ V L G+ TALH HLL+ P + H+ G G+ LA L AL Sbjct 89 DLVLTEDEVNPVMTRLVEGGVEITALHNHLLRASPNPLYMHVSGHGEPETLAATLMGALG 148 Query 174 A--TTIGPPTP---PPA---------------RQPPVD----IDVAGVDQALGRKGTQDG 209 A T G T PPA R D +D A ++ ALGRKG +G Sbjct 149 ASRTPFGAETATGTPPAGHPGPASAGASPAPARATASDQAQPLDTAAIEAALGRKGKLNG 208 Query 210 GLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRA 269 G+ S+PR +T + G +P ++ INFQP G G+AAI GDF+L A EV VI+ Sbjct 209 GVYAVSVPRAETPRDHGMDVPE-AMGSAIAINFQPTGGGKAAITGDFVLTADEVNPVIKT 267 Query 270 MRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNLQS 320 +R I + LHNH L +EPRLF+MH+WA DD LA+ L A+ + S Sbjct 268 LRQNGIEVTALHNHMLGDEPRLFFMHFWANDDTAKLAKGLGAALKHVKVAS 318 >gi|339009511|ref|ZP_08642083.1| LysM domain protein [Brevibacillus laterosporus LMG 15441] gi|338773989|gb|EGP33520.1| LysM domain protein [Brevibacillus laterosporus LMG 15441] Length=309 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 100/271 (37%), Positives = 154/271 (57%), Gaps = 7/271 (2%) Query 48 DADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNN 107 D W+ V + N +R+ PR+DL I V I P L+L Y AF + N+ Sbjct 41 DPKWESVKRVFNKGS---IQNDVFRVTFPRSDLQIKVDHVQIDPNLALTSYLAFKQVGNH 97 Query 108 ETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQG 167 +++MGDLV+ E+E+ V L GI TALH H+++++P + + H+ G GD LA+ Sbjct 98 -SMMMGDLVLLEKEVKPVETKLAELGIEITALHNHIIEENPKIMYLHVAGHGDPVNLAEK 156 Query 168 LKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGH 227 +K AL T + PP + P + + V+ +G KG Q G + ++SIPR + I E G Sbjct 157 MKDALSVTGTPLASTPPEKSPST-FNWSKVEDIIGWKGVQRGKVFQFSIPRPEKITEKGV 215 Query 228 VLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTE 287 +P ++ + INFQ +G +AA GDF+L++ EV V+R + IT+ +HNH L E Sbjct 216 GIPP-AMGIAMPINFQLIGE-KAATTGDFVLLSNEVNPVVRELTKNGITVTAIHNHMLDE 273 Query 288 EPRLFYMHYWAVDDAVTLARALRPAMDATNL 318 PRLF++H+W VD+ LAR LR A++ T + Sbjct 274 SPRLFFLHFWGVDEPEKLARGLRAALNQTTV 304 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/129 (32%), Positives = 67/129 (52%), Gaps = 4/129 (3%) Query 50 DWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNET 109 +W V D +G G ++ ++PR + IT GV I P + + F + + Sbjct 181 NWSKVEDIIGWKGV--QRGKVFQFSIPRPE-KITEKGVGIPPAMGIAMPINF-QLIGEKA 236 Query 110 LLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLK 169 GD V+ E+ V L +GI TA+H H+L + P +++ H G+ + +LA+GL+ Sbjct 237 ATTGDFVLLSNEVNPVVRELTKNGITVTAIHNHMLDESPRLFFLHFWGVDEPEKLARGLR 296 Query 170 AALDATTIG 178 AAL+ TT+G Sbjct 297 AALNQTTVG 305 >gi|282163979|ref|YP_003356364.1| hypothetical protein MCP_1309 [Methanocella paludicola SANAE] gi|282156293|dbj|BAI61381.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length=299 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 97/267 (37%), Positives = 153/267 (58%), Gaps = 5/267 (1%) Query 51 WKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETL 110 W PV A+G+ G++ + + +PR DL +T G+ + PG + +F R T+ Sbjct 35 WAPVEQAMGKKGEVSPDGVVTFV-IPR-DLSVTLDGIRLAPGSDMSHEFSFMRTSEG-TM 91 Query 111 LMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKA 170 ++G++++ E+E+ VT L A GI +TALH HLL++ P + W H+H GD +A+ L Sbjct 92 MVGEIMLKEDEVAGVTQKLLAAGITETALHNHLLRERPHIMWLHVHANGDPVPVAKALNN 151 Query 171 ALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLP 230 + GP T P +D A +D +G +G + G+ YS+PR D I G LP Sbjct 152 IITPLDGGPATVS-QHVPLSQLDTARLDAIIGLQGKAEDGVYAYSVPRADKINMGGVELP 210 Query 231 AVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPR 290 ++++T I+FQP G+G+AA+ G+F+L EV V+ + + + LH+H + E+PR Sbjct 211 P-DMDISTRISFQPTGQGKAAVIGEFVLEKSEVSPVLARLADNGVEVTALHSHMINEQPR 269 Query 291 LFYMHYWAVDDAVTLARALRPAMDATN 317 LFYMH WAV D +A A+R A+D TN Sbjct 270 LFYMHCWAVGDPAVIAGAMRKALDKTN 296 >gi|73669551|ref|YP_305566.1| hypothetical protein Mbar_A2052 [Methanosarcina barkeri str. Fusaro] gi|72396713|gb|AAZ70986.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length=311 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/287 (35%), Positives = 160/287 (56%), Gaps = 4/287 (1%) Query 33 GSGHAGKARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPG 92 G+ A S +T DW+ V A+G G + + A +P L++T G+ + P Sbjct 23 GTVSAKTYDSENASTLEDWQSVEKAMGEKGNVSPDG-AITFAIPMT-LNVTLDGIKLNPA 80 Query 93 LSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWW 152 F R ++ +++G++ +TEEE+ V+D + G+ TA+H HLL+ P + W Sbjct 81 SERYHEFDFMRA-GDKAMMVGEIGVTEEEVKNVSDMVLQSGLQVTAIHNHLLRTSPHIIW 139 Query 153 THIHGMGDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLM 212 HI+G GD A +A+ ++ D G + I+ +D+ +G KG+ +GG Sbjct 140 IHIYGYGDPADMAKKIRNITDYVNRGSSASESEKFQSKGINTTELDRIIGDKGSAEGGDY 199 Query 213 KYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRA 272 Y IPR D I +G+ L V ++++T I+FQP+G+G AA+ G+F L EV+ V+R + A Sbjct 200 NYEIPRADKIQMNGYTLSPV-MDVSTPISFQPLGKGNAAVIGEFALEENEVEPVVRTLTA 258 Query 273 GNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDATNLQ 319 I + LH+H +TE+PRLFY+H WA DA LA +R A++ TN++ Sbjct 259 NGIEVTALHSHMITEQPRLFYVHCWATGDAAELAGIMREALNETNIK 305 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 33/130 (26%), Positives = 57/130 (44%), Gaps = 3/130 (2%) Query 193 DVAGVDQALGRKGTQD-GGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAA 251 D V++A+G KG G + ++IP + DG L S +F G +A Sbjct 40 DWQSVEKAMGEKGNVSPDGAITFAIPMTLNVTLDGIKLNPASERYHE-FDFMRAG-DKAM 97 Query 252 INGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRP 311 + G+ + EV+ V + + + +HNH L P + ++H + D +A+ +R Sbjct 98 MVGEIGVTEEEVKNVSDMVLQSGLQVTAIHNHLLRTSPHIIWIHIYGYGDPADMAKKIRN 157 Query 312 AMDATNLQSS 321 D N SS Sbjct 158 ITDYVNRGSS 167 >gi|289752644|ref|ZP_06512022.1| LOW QUALITY PROTEIN: lipoprotein lpqo [Mycobacterium tuberculosis EAS054] gi|289693231|gb|EFD60660.1| LOW QUALITY PROTEIN: lipoprotein lpqo [Mycobacterium tuberculosis EAS054] Length=316 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 81/151 (54%), Positives = 109/151 (73%), Gaps = 1/151 (0%) Query 166 QGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIED 225 + +++ALDAT PP P + Q +D+D A +D+ALGR GT GG+ K+ I R+D + Sbjct 164 RAVRSALDATDTPPPAPATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMS 223 Query 226 GHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGL 285 G ++P S+ L T +NFQP G GRAAINGDF++ A EVQ+V++A+R G I IV +HNHG Sbjct 224 GMLIPP-SMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGF 282 Query 286 TEEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 E+PRLFYMH+WA +DAV LAR LR A+DAT Sbjct 283 DEQPRLFYMHFWAENDAVALARTLRAAVDAT 313 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 46/136 (34%), Positives = 67/136 (50%), Gaps = 3/136 (2%) Query 40 ARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYA 99 A S T+ D D + +ALGRSG + Y+ + R D +T G+ I P + L Sbjct 181 ATSGQTSLDLDTAAIDEALGRSGTIAGG--VYKFFIARRDP-VTMSGMLIPPSMGLATAL 237 Query 100 AFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMG 159 F N + GD V+T E+ V AL+ GI A+H H + P +++ H Sbjct 238 NFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAEN 297 Query 160 DAARLAQGLKAALDAT 175 DA LA+ L+AA+DAT Sbjct 298 DAVALARTLRAAVDAT 313 >gi|282163980|ref|YP_003356365.1| hypothetical protein MCP_1310 [Methanocella paludicola SANAE] gi|282156294|dbj|BAI61382.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length=320 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 107/309 (35%), Positives = 163/309 (53%), Gaps = 19/309 (6%) Query 10 IVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDAD-WKPVADALGRSGKLGDNN 68 I+ + A+IL A S G A S DA W V +A+G G + Sbjct 22 ILILAGVLAIILLAAIECSPGAAES-------------DASYWNKVDEAVGIKGTMLAGG 68 Query 69 TAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDA 128 Y+ LP + V ++P ++ + +F R +E ++MGD+V+ +L V Sbjct 69 V-YKTELPPGVPDVKVGDVLLRPAMAADSWVSFVRM-GDEAMMMGDIVVPAGDLGPVQRR 126 Query 129 LQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPPTPPPARQP 188 GI TA+H L+ + P V+ HI G G+AA +A ++AAL+ + PA P Sbjct 127 FVEEGIDITAIHNTLVGESPQVYDMHISGRGNAAVMAASVRAALEQVNVTHEEVMPA--P 184 Query 189 PVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRG 248 + +D+A+G +G + G+ Y +PR + I DG +P+ +++++T I FQP+G G Sbjct 185 GSSGQLKRLDEAMGYRGRAENGVYVYEVPRAERITMDGMEIPS-TMDVSTTIKFQPLGGG 243 Query 249 RAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARA 308 +AAI GDFIL EV+ V++ + I + LH H LTEEPRLF MH+WA D LA+A Sbjct 244 KAAITGDFILRPDEVKTVMKTLSENGIVVTALHTHMLTEEPRLFMMHFWATGDEAALAKA 303 Query 309 LRPAMDATN 317 LR A+D TN Sbjct 304 LRQALDNTN 312 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/123 (29%), Positives = 64/123 (53%), Gaps = 2/123 (1%) Query 197 VDQALGRKGTQ-DGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGD 255 VD+A+G KGT GG+ K +P ++ G VL ++ + ++F +G A + GD Sbjct 54 VDEAVGIKGTMLAGGVYKTELPPGVPDVKVGDVLLRPAMAADSWVSFVRMG-DEAMMMGD 112 Query 256 FILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDA 315 ++ A ++ V R I I +HN + E P+++ MH +A +A ++R A++ Sbjct 113 IVVPAGDLGPVQRRFVEEGIDITAIHNTLVGESPQVYDMHISGRGNAAVMAASVRAALEQ 172 Query 316 TNL 318 N+ Sbjct 173 VNV 175 >gi|108760499|ref|YP_630020.1| LppY/LpqO family protein [Myxococcus xanthus DK 1622] gi|108464379|gb|ABF89564.1| LppY/LpqO family protein [Myxococcus xanthus DK 1622] Length=310 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 99/264 (38%), Positives = 147/264 (56%), Gaps = 12/264 (4%) Query 59 GRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVIT 118 G G+L + +++NLPR DL + + GV + P L L +AAF R + T++MGD+V+ Sbjct 47 GAKGELSADEGVFKVNLPRTDLKVGAAGVKLIPPLGLTAWAAFKRV-GDATMVMGDIVLL 105 Query 119 EEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAA---LDAT 175 E+++ V D +G+ TALH H + P V + HI GMG+ ARLA + L T Sbjct 106 EDQVNPVMDVALQNGLEVTALHNHFFWEQPKVMFMHISGMGETARLADAVGKVFTRLRET 165 Query 176 TIGPPTPPPARQPPV--DIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVL-PAV 232 G P A P +DV +D LG+KGT G+ K ++ R T+ GH + A+ Sbjct 166 AGGKGRVPRASVDPARSKLDVTKLDALLGQKGTSKDGVYKVTVGR--TVRIYGHEMGKAM 223 Query 233 SLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLF 292 +N P +A ++GDF ++ E+Q V++A+RA NI IV +HNH EEPR+ Sbjct 224 GVNTWAAFAGTP---QQAVVDGDFAILESELQPVLKALRAANIDIVAIHNHMTGEEPRML 280 Query 293 YMHYWAVDDAVTLARALRPAMDAT 316 ++HYW V A LAR +R AM+ T Sbjct 281 FLHYWGVGPADALARGVRSAMELT 304 >gi|295133340|ref|YP_003584016.1| LppY/LpqO family protein [Zunongwangia profunda SM-A87] gi|294981355|gb|ADF51820.1| LppY/LpqO family protein [Zunongwangia profunda SM-A87] Length=324 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 98/323 (31%), Positives = 162/323 (51%), Gaps = 14/323 (4%) Query 9 RIVAITTAAAVILAACSSGSKGGAGSGH--AGKARSAVTTTDADWKP-----VADALGRS 61 + V I+T ++ G K A S + K + D + P + + +G Sbjct 4 KYVLISTVFLLLSCNGHDGKKENADSSRPSSEKQKEIEQQEDMERHPLNITAIREVIGIK 63 Query 62 GKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEE 121 G +NN Y++ +P+NDL I G I P + LG +AAF+ ++MGD+V+TE++ Sbjct 64 GT--ENNGEYKVVVPQNDLEIMVDGFKIIPPMGLGSWAAFSAIKEG-AMVMGDIVVTEDD 120 Query 122 LPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPPT 181 L V + G+ TA+H H ++ +P V + HI GMG+ LA+ +KA D Sbjct 121 LWPVQQEVIRQGLTITAIHNHFVRNNPNVMYMHIGGMGEEGVLAEKVKALFDKVVEVRGG 180 Query 182 PPPARQPPV---DIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTT 238 P A +P +D +D +G G + G+ K +I R D + + + + T Sbjct 181 NPAASEPSEVENTLDTDRIDNIIGHSGNLNNGVYKITIGRPDVDLREHGAPVSTFMGFNT 240 Query 239 VINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWA 298 ++Q +AA+ GDF ++A E+ VI+A+ I +V +HNH + EEPR+F++HYW Sbjct 241 WASWQGTPE-KAAVAGDFTMLADEIAPVIKALVENGIEVVAVHNHMVYEEPRIFFLHYWG 299 Query 299 VDDAVTLARALRPAMDATNLQSS 321 V A LA L+ A++ T + S Sbjct 300 VGPAEKLAHGLKTALNQTGVVSK 322 >gi|116625935|ref|YP_828091.1| hypothetical protein Acid_6893 [Candidatus Solibacter usitatus Ellin6076] gi|116229097|gb|ABJ87806.1| protein of unknown function LppY and LpqO [Candidatus Solibacter usitatus Ellin6076] Length=304 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 90/284 (32%), Positives = 144/284 (51%), Gaps = 12/284 (4%) Query 40 ARSAVTTTD---ADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLG 96 A +AV T AD+ V ALG+ G N ++N+PRNDL +T G+ G Sbjct 12 ASAAVATAQSMPADYDAVLKALGKQGDYKSN--VLKVNIPRNDLKVTIDGIATPTPFGFG 69 Query 97 GYAAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIH 156 G+ A + ++MGDLV+ E+E+ V AL ++G+ TALH H ++P +++ H+H Sbjct 70 GWVAMTKGTGGSDVMMGDLVLLEDEVNPVMSALLSNGLEVTALHNHFFFENPRIFYMHVH 129 Query 157 GMGDAARLAQGLKAALDATTIGPPTPPPA------RQPPVDIDVAGVDQALGRKGTQDGG 210 G G AA LA+ +K ALD G P + ID A + + +G +G Q+G Sbjct 130 GHGKAADLARMVKPALDLIGKGSPEHQSSVAGGAAGVTGGTIDTAKIAKQVGHEGEQNGQ 189 Query 211 LMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAM 270 + K +I R D +++ + L T F A I GD +++ EV V++A+ Sbjct 190 VYKITIGRDDINLKEMGATINARMGLNTWAAFFGT-DANAEIAGDVAMLSNEVTPVLKAL 248 Query 271 RAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMD 314 RA + +V +HNH +P ++++HYW LA R A++ Sbjct 249 RANALNVVAIHNHMAGGDPTVYFLHYWGTGPVEKLATGFRAALN 292 >gi|284037708|ref|YP_003387638.1| hypothetical protein Slin_2825 [Spirosoma linguale DSM 74] gi|283817001|gb|ADB38839.1| protein of unknown function LppY and LpqO [Spirosoma linguale DSM 74] Length=322 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 95/270 (36%), Positives = 145/270 (54%), Gaps = 12/270 (4%) Query 54 VADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFAR-YDNNETLLM 112 +A A+G+ G + Y I LPRNDL +T G I GG+ AF + D ++T++M Sbjct 45 IAKAIGKKGAYNEAQATYSIPLPRNDLRVTINGEPIPIPFGFGGWVAFKKTLDGSQTVMM 104 Query 113 GDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAAL 172 D V+ E E+ + DA QA G+ A+H H + P +++ HIHGMGD A LA+ A+ Sbjct 105 SDTVLLEAEVNPLIDATQAAGLEVGAIHNHFFYEQPRIFYMHIHGMGDVADLARKYAQAI 164 Query 173 DATTIGP---PTPP--PARQPPVDI-DVAGVDQALGRKGTQDGGLMKYSIPRKDT-IIED 225 T + P PTP A P ++ D+ +D + KG +G KY++ R D II Sbjct 165 GNTKLFPANQPTPSQNSAAHPGNELFDLPVLDGLVKYKGVVNGPTYKYTVGRDDVQIIAM 224 Query 226 GHVLPAVSLNLTTVINFQPVGRGRAA-INGDFILIAPEVQEVIRAMRAGNITIVELHNHG 284 G + A ++ L + +F G+ AA I GD ++ EV V+ +R N+ +V LH+H Sbjct 225 GAEMTA-AIGLNSWASF--AGKQDAAHIAGDIAMLDTEVNAVVNTLRKHNLQVVALHHHM 281 Query 285 LTEEPRLFYMHYWAVDDAVTLARALRPAMD 314 L E+PR ++HY+ A LA+ R A+D Sbjct 282 LGEQPRTVFLHYYGRGPAPELAKGFRAALD 311 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/153 (29%), Positives = 70/153 (46%), Gaps = 12/153 (7%) Query 170 AALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIP--RKDTIIE-DG 226 A +A T+ P P Q + +A+G+KG + YSIP R D + +G Sbjct 25 ATENARTLKTPALSPEEQ-------DAIAKAIGKKGAYNEAQATYSIPLPRNDLRVTING 77 Query 227 HVLPAVSLNLTTVINFQPVGRG-RAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGL 285 +P + + F+ G + + D +L+ EV +I A +A + + +HNH Sbjct 78 EPIP-IPFGFGGWVAFKKTLDGSQTVMMSDTVLLEAEVNPLIDATQAAGLEVGAIHNHFF 136 Query 286 TEEPRLFYMHYWAVDDAVTLARALRPAMDATNL 318 E+PR+FYMH + D LAR A+ T L Sbjct 137 YEQPRIFYMHIHGMGDVADLARKYAQAIGNTKL 169 >gi|186473934|ref|YP_001861276.1| protein of unknown function LppY and LpqO [Burkholderia phymatum STM815] gi|184196266|gb|ACC74230.1| protein of unknown function LppY and LpqO [Burkholderia phymatum STM815] Length=307 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/270 (32%), Positives = 135/270 (50%), Gaps = 19/270 (7%) Query 59 GRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVIT 118 G G ++I+ PRND+ + G+ + P + L YAAF ++ ++MGD + Sbjct 42 GLKGTYSKQEKVFKISKPRNDVKVQVDGLTMPPFMGLTSYAAFKPAQGSQVMMMGDTALF 101 Query 119 EEEL-PKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALD--AT 175 E+E+ P ++ AL A G+ TALH H P V++ HI G GDAA+LA+G+K D A Sbjct 102 EDEVNPAMSAALDA-GLEVTALHNHFFFDQPKVYFMHIGGHGDAAKLAEGVKKVYDRIAE 160 Query 176 TIGPPTPPPARQP-----PVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLP 230 P + P P I A ++ G KG G+ K + R + + Sbjct 161 VRSAHADPESAFPGQIANPSSISPAPLEVVFGSKGQTSKGMFKVVVGRTAS-------MQ 213 Query 231 AVSLNLTTVINFQPVGRG---RAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTE 287 V++ +N G A ++GDF + E+Q V+++MRA I IV +H H E Sbjct 214 GVTVGNEMGVNTWAAFAGTDDEAVVDGDFAMRESELQAVLKSMRASGINIVAIHQHMTDE 273 Query 288 EPRLFYMHYWAVDDAVTLARALRPAMDATN 317 PR+ ++HYW AV LA+ ++ A+DA + Sbjct 274 TPRILFLHYWGKGKAVDLAKGVKAALDAQS 303 >gi|323525653|ref|YP_004227806.1| hypothetical protein BC1001_1305 [Burkholderia sp. CCGE1001] gi|323382655|gb|ADX54746.1| protein of unknown function LppY and LpqO [Burkholderia sp. CCGE1001] Length=308 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 85/258 (33%), Positives = 134/258 (52%), Gaps = 19/258 (7%) Query 71 YRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEEL-PKVTDAL 129 ++++ PRND+ + G + P + L YAAF ++ ++MGD V+ E+E+ P ++ AL Sbjct 55 FKVSKPRNDIKVQVDGWSMPPFMGLTSYAAFKPVHGSQAIMMGDTVLFEDEVNPAMSAAL 114 Query 130 QAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALD--ATTIGPPTPPPARQ 187 A G+ TALH H P V++ HI G GDAA+LA+G++ D A P + Sbjct 115 DA-GLEVTALHNHFFFDQPKVYFMHIGGHGDAAKLAEGVRKVYDRIAEVRSAHADPESAF 173 Query 188 P-----PVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINF 242 P P I A ++ G KG + G+ K + RK + V++ +N Sbjct 174 PGQIGSPSSISPAPLEAVFGSKGQTNNGMFKVVVGRKAN-------MHGVAVGNEMGVNT 226 Query 243 QPVGRG---RAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAV 299 G A ++GDF + E+Q V+++MRA I IV +H H E PR+ ++HYW Sbjct 227 WAAFAGTDDEAVVDGDFAMRESELQAVLKSMRASGINIVAIHQHMTDETPRILFLHYWGK 286 Query 300 DDAVTLARALRPAMDATN 317 AV LA+ ++ A+DA N Sbjct 287 GKAVDLAKGVKAALDAQN 304 >gi|82703579|ref|YP_413145.1| hypothetical protein Nmul_A2464 [Nitrosospira multiformis ATCC 25196] gi|82411644|gb|ABB75753.1| unknown protein [Nitrosospira multiformis ATCC 25196] Length=306 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 92/291 (32%), Positives = 142/291 (49%), Gaps = 24/291 (8%) Query 36 HAGKARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSL 95 HA R+ + T + + G G ++++ PR D+ I + P + L Sbjct 24 HAADTRAILNTAE-----IERLTGLKGTYSKEENVFKVSKPRTDVKIQVDKWPMPPFMGL 78 Query 96 GGYAAFARYDNNETLLMGDLVITEEEL-PKVTDALQAHGIAQTALHKHLLQQDPPVWWTH 154 G +A FA +++ ++MGD V+ E+E+ P ++ A +A G+ T LH H +P V++ H Sbjct 79 GSWAGFAPAQDDQVVMMGDTVLFEDEVNPAISAAFEA-GLEVTGLHNHFFFDEPKVYFMH 137 Query 155 IHGMGDAARLAQGLKAALDATT-IGPPTPPPARQPPVDIDVAG------VDQALGRKGTQ 207 I G G AA L+ G+K D I P P+ + P I ++Q L KGT Sbjct 138 IGGRGSAAELSAGVKKIYDKVAEIRAVQPVPSSRFPKTIPQENKISPQPLEQILDMKGTS 197 Query 208 DGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRG---RAAINGDFILIAPEVQ 264 G+ K I R TI VS+ IN G A ++GDF+++ E+Q Sbjct 198 KDGMFKVVIGRPATI-------HGVSVGKEMGINTWAAFAGSDSEAVVDGDFVMLPDEMQ 250 Query 265 EVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDA 315 V+R MR G+I IV +H H E+P +MHYW +A LA+ +R A+DA Sbjct 251 TVLRTMREGDINIVAIHQHMTHEQPHHLFMHYWGKGNAADLAKTIRKALDA 301 >gi|282891679|ref|ZP_06300166.1| hypothetical protein pah_c188o056 [Parachlamydia acanthamoebae str. Hall's coccus] gi|338175591|ref|YP_004652401.1| hypothetical protein PUV_15970 [Parachlamydia acanthamoebae UV7] gi|281498469|gb|EFB40801.1| hypothetical protein pah_c188o056 [Parachlamydia acanthamoebae str. Hall's coccus] gi|336479949|emb|CCB86547.1| putative uncharacterized protein [Parachlamydia acanthamoebae UV7] Length=298 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/274 (30%), Positives = 131/274 (48%), Gaps = 13/274 (4%) Query 52 KPVADALGR-SGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETL 110 K ++L R G + ++ PRND+ I+ + P + L ++AF N+ + Sbjct 28 KDKYESLTRLKGTYNEKEKVFKAIFPRNDIKISVDNTQLDPFMGLTSWSAFTSVGENKFM 87 Query 111 LMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKA 170 +MGD V+ ++E+ V I TALH H P V++ HI G G A LA G+K Sbjct 88 VMGDFVLFQDEVNPVMTVFLNRNIDVTALHNHFFYDTPKVYFMHIEGEGSLAHLAGGVKK 147 Query 171 ALDATT-IGPPTPPPARQ-------PPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTI 222 ALD I P++ ID++ +++ KG G+ K+ R Sbjct 148 ALDVVKDIRIKNSYPSKNFGGVHISSQNSIDISSLEKIFDTKGLSKDGMAKFVFGRS--- 204 Query 223 IEDGHVLPAVSLNLTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHN 282 ++ G V+ + + T F A I+GDF ++ E+Q V++A+R G+I IV +H Sbjct 205 VKMGDVILGGDMGVNTWAAFAGTNE-NAIIDGDFAVLENELQSVLKALRKGDINIVAIHQ 263 Query 283 HGLTEEPRLFYMHYWAVDDAVTLARALRPAMDAT 316 H E PR+ ++HYW +A LA ++ A+ T Sbjct 264 HMTLEHPRMIFLHYWGRGNAKNLANTVKEALKLT 297 Lambda K H 0.317 0.134 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 564737661852 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40