BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3005c Length=279 Score E Sequences producing significant alignments: (Bits) Value gi|15610142|ref|NP_217521.1| hypothetical protein Rv3005c [Mycob... 546 2e-153 gi|340627995|ref|YP_004746447.1| hypothetical protein MCAN_30281... 545 4e-153 gi|308232312|ref|ZP_07415637.2| hypothetical protein TMAG_01212 ... 508 5e-142 gi|183981720|ref|YP_001850011.1| hypothetical protein MMAR_1707 ... 424 7e-117 gi|118617536|ref|YP_905868.1| hypothetical protein MUL_1944 [Myc... 421 8e-116 gi|240168934|ref|ZP_04747593.1| hypothetical protein MkanA1_0645... 387 1e-105 gi|41409138|ref|NP_961974.1| hypothetical protein MAP3040c [Myco... 342 4e-92 gi|342858171|ref|ZP_08714826.1| hypothetical protein MCOL_04836 ... 339 3e-91 gi|118463083|ref|YP_883017.1| DoxX subfamily protein, putative [... 339 3e-91 gi|15827904|ref|NP_302167.1| hypothetical protein ML1698 [Mycoba... 330 1e-88 gi|296171271|ref|ZP_06852675.1| DoxX family protein [Mycobacteri... 328 5e-88 gi|254819127|ref|ZP_05224128.1| hypothetical protein MintA_04330... 308 5e-82 gi|120403112|ref|YP_952941.1| DoxX family protein [Mycobacterium... 291 7e-77 gi|118469364|ref|YP_886712.1| DoxX subfamily protein [Mycobacter... 283 3e-74 gi|315445150|ref|YP_004078029.1| hypothetical protein Mspyr1_358... 275 4e-72 gi|145224820|ref|YP_001135498.1| DoxX family protein [Mycobacter... 273 2e-71 gi|126434472|ref|YP_001070163.1| DoxX family protein [Mycobacter... 246 3e-63 gi|108798872|ref|YP_639069.1| DoxX [Mycobacterium sp. MCS] >gi|1... 246 3e-63 gi|333991366|ref|YP_004523980.1| hypothetical protein JDM601_272... 194 1e-47 gi|169630413|ref|YP_001704062.1| hypothetical protein MAB_3332c ... 192 4e-47 gi|254552084|ref|ZP_05142531.1| hypothetical protein Mtube_16796... 171 8e-41 gi|254552083|ref|ZP_05142530.1| hypothetical protein Mtube_16787... 159 5e-37 gi|226365944|ref|YP_002783727.1| hypothetical protein ROP_65350 ... 157 2e-36 gi|111023443|ref|YP_706415.1| hypothetical protein RHA1_ro06482 ... 156 4e-36 gi|312140497|ref|YP_004007833.1| integral membrane protein [Rhod... 154 2e-35 gi|325675884|ref|ZP_08155568.1| DoxX protein [Rhodococcus equi A... 153 3e-35 gi|296140561|ref|YP_003647804.1| DoxX family protein [Tsukamurel... 151 8e-35 gi|262203123|ref|YP_003274331.1| DoxX family protein [Gordonia b... 145 4e-33 gi|229493403|ref|ZP_04387192.1| DoxX family protein [Rhodococcus... 141 1e-31 gi|343926857|ref|ZP_08766350.1| hypothetical protein GOALK_072_0... 140 2e-31 gi|226305880|ref|YP_002765840.1| hypothetical protein RER_23930 ... 140 2e-31 gi|134102599|ref|YP_001108260.1| hypothetical protein SACE_6162 ... 115 5e-24 gi|291004716|ref|ZP_06562689.1| hypothetical protein SeryN2_0936... 115 9e-24 gi|319948235|ref|ZP_08022391.1| DoxX family protein [Dietzia cin... 111 9e-23 gi|326381534|ref|ZP_08203228.1| DoxX family protein [Gordonia ne... 105 8e-21 gi|227548053|ref|ZP_03978102.1| DoxX family protein [Corynebacte... 104 1e-20 gi|256380018|ref|YP_003103678.1| DoxX family protein [Actinosynn... 103 4e-20 gi|336325932|ref|YP_004605898.1| hypothetical protein CRES_1379 ... 97.4 2e-18 gi|302330577|gb|ADL20771.1| Hypothetical protein Cp1002_0883 [Co... 94.7 1e-17 gi|331695663|ref|YP_004331902.1| DoxX family protein [Pseudonoca... 94.4 2e-17 gi|302206024|gb|ADL10366.1| Hypothetical protein CpC231_0885 [Co... 94.4 2e-17 gi|300858303|ref|YP_003783286.1| hypothetical protein cpfrc_0088... 94.4 2e-17 gi|311740563|ref|ZP_07714390.1| conserved hypothetical protein [... 94.0 2e-17 gi|227501744|ref|ZP_03931793.1| DoxX family protein [Corynebacte... 93.2 4e-17 gi|255324568|ref|ZP_05365685.1| conserved hypothetical protein [... 93.2 4e-17 gi|334696672|gb|AEG81469.1| putative membrane protein [Corynebac... 92.0 9e-17 gi|227488048|ref|ZP_03918364.1| conserved hypothetical protein [... 92.0 9e-17 gi|172040428|ref|YP_001800142.1| hypothetical protein cur_0748 [... 91.7 1e-16 gi|337290559|ref|YP_004629580.1| hypothetical protein CULC22_009... 90.9 2e-16 gi|145295405|ref|YP_001138226.1| hypothetical protein cgR_1343 [... 90.9 2e-16 >gi|15610142|ref|NP_217521.1| hypothetical protein Rv3005c [Mycobacterium tuberculosis H37Rv] gi|15842563|ref|NP_337600.1| hypothetical protein MT3085 [Mycobacterium tuberculosis CDC1551] gi|31794182|ref|NP_856675.1| hypothetical protein Mb3030c [Mycobacterium bovis AF2122/97] 50 more sequence titles Length=279 Score = 546 bits (1406), Expect = 2e-153, Method: Compositional matrix adjust. Identities = 278/279 (99%), Positives = 279/279 (100%), Gaps = 0/279 (0%) Query 1 VTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASS 60 +TSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASS Sbjct 1 MTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASS 60 Query 61 GVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRV 120 GVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRV Sbjct 61 GVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRV 120 Query 121 GLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGL 180 GLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGL Sbjct 121 GLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGL 180 Query 181 FTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGL 240 FTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGL Sbjct 181 FTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGL 240 Query 241 DAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 DAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA Sbjct 241 DAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 >gi|340627995|ref|YP_004746447.1| hypothetical protein MCAN_30281 [Mycobacterium canettii CIPT 140010059] gi|340006185|emb|CCC45359.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=279 Score = 545 bits (1403), Expect = 4e-153, Method: Compositional matrix adjust. Identities = 277/279 (99%), Positives = 278/279 (99%), Gaps = 0/279 (0%) Query 1 VTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASS 60 +TSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASS Sbjct 1 MTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASS 60 Query 61 GVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRV 120 GVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRV Sbjct 61 GVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRV 120 Query 121 GLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGL 180 GLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGL Sbjct 121 GLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGL 180 Query 181 FTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGL 240 FTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGL Sbjct 181 FTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGL 240 Query 241 DAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 DAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNG NPLA Sbjct 241 DAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGVNPLA 279 >gi|308232312|ref|ZP_07415637.2| hypothetical protein TMAG_01212 [Mycobacterium tuberculosis SUMu001] gi|308369928|ref|ZP_07419548.2| hypothetical protein TMBG_03156 [Mycobacterium tuberculosis SUMu002] gi|308371200|ref|ZP_07424172.2| hypothetical protein TMCG_02260 [Mycobacterium tuberculosis SUMu003] 24 more sequence titles Length=261 Score = 508 bits (1307), Expect = 5e-142, Method: Compositional matrix adjust. Identities = 261/261 (100%), Positives = 261/261 (100%), Gaps = 0/261 (0%) Query 19 MPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASSGVGNSGYSLIEAAEPLPY 78 MPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASSGVGNSGYSLIEAAEPLPY Sbjct 1 MPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASSGVGNSGYSLIEAAEPLPY 60 Query 79 VQPQPGRQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWW 138 VQPQPGRQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWW Sbjct 61 VQPQPGRQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWW 120 Query 139 DGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGLL 198 DGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGLL Sbjct 121 DGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGLL 180 Query 199 AGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVAL 258 AGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVAL Sbjct 181 AGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVAL 240 Query 259 LGGIAAGIAVWVLLNGANPLA 279 LGGIAAGIAVWVLLNGANPLA Sbjct 241 LGGIAAGIAVWVLLNGANPLA 261 >gi|183981720|ref|YP_001850011.1| hypothetical protein MMAR_1707 [Mycobacterium marinum M] gi|183175046|gb|ACC40156.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=282 Score = 424 bits (1090), Expect = 7e-117, Method: Compositional matrix adjust. Identities = 225/282 (80%), Positives = 247/282 (88%), Gaps = 3/282 (1%) Query 1 VTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGS-GTTTVIPPYDAAS 59 +TSSNDS WQRPDDSPGP+PGRPV+ASLVDPEDDLTPA+Y+ DFGS GTTTVIPPYD + Sbjct 1 MTSSNDSRWQRPDDSPGPIPGRPVTASLVDPEDDLTPAKYSSDFGSAGTTTVIPPYDPTN 60 Query 60 SGVGNSGYSLIEAAEPLPYVQPQPG-RQVPAGSAGIDMD-DDERVRAAGRRGTQNLGLLI 117 SG SGY+L++A EPLPYVQPQPG R +PA A +DMD DDER+RAA RRGTQN GLLI Sbjct 61 SGAVPSGYNLMDAQEPLPYVQPQPGARHIPATPAALDMDEDDERIRAASRRGTQNFGLLI 120 Query 118 LRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLV 177 LRVGLGAVLIAHGLQKLFGWW G G+ F+NSLSD+G+QHA+ILAYV AGGEIV GVLLV Sbjct 121 LRVGLGAVLIAHGLQKLFGWWGGSGVTAFKNSLSDVGFQHADILAYVGAGGEIVVGVLLV 180 Query 178 LGLFTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGR 237 LGLFTPLA AGALAFLING LA +SA+ +YFL DGHEYQITLVVMAVAVILSGPGR Sbjct 181 LGLFTPLAGAGALAFLINGTLANVSARPHSQFSYFLPDGHEYQITLVVMAVAVILSGPGR 240 Query 238 YGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 YGLDA RGWAHRPFIGSFVALL GIAAGIA+WVLLNG NP+A Sbjct 241 YGLDAGRGWAHRPFIGSFVALLTGIAAGIAIWVLLNGVNPVA 282 >gi|118617536|ref|YP_905868.1| hypothetical protein MUL_1944 [Mycobacterium ulcerans Agy99] gi|118569646|gb|ABL04397.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=282 Score = 421 bits (1081), Expect = 8e-116, Method: Compositional matrix adjust. Identities = 223/282 (80%), Positives = 246/282 (88%), Gaps = 3/282 (1%) Query 1 VTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGS-GTTTVIPPYDAAS 59 +TSSNDS WQRPDDSPGP+PGRPV+ASLVDPEDDLTPA+Y+ DFGS GTTTVIPPYD + Sbjct 1 MTSSNDSRWQRPDDSPGPIPGRPVTASLVDPEDDLTPAKYSSDFGSAGTTTVIPPYDPTN 60 Query 60 SGVGNSGYSLIEAAEPLPYVQPQPG-RQVPAGSAGIDMD-DDERVRAAGRRGTQNLGLLI 117 SG SGY+L++A EPLPYVQPQPG R +PA A +DMD DDER+RAA RRGTQN GLLI Sbjct 61 SGAVPSGYNLMDAQEPLPYVQPQPGARHIPATPAALDMDEDDERIRAASRRGTQNFGLLI 120 Query 118 LRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLV 177 LRVGLGAVLIAHGLQKLFGWW G G+ F+NSLSD+G+QHA+ILAYV AGGEIV GVLLV Sbjct 121 LRVGLGAVLIAHGLQKLFGWWGGSGVTAFKNSLSDVGFQHADILAYVGAGGEIVVGVLLV 180 Query 178 LGLFTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGR 237 LGLFTPLA AGALAFL+NG LA +SA+ +YFL D HEYQITLVVMAVAVILSGPGR Sbjct 181 LGLFTPLAGAGALAFLMNGTLANVSARPHSQFSYFLPDDHEYQITLVVMAVAVILSGPGR 240 Query 238 YGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 YGLDA RGWAHRPFIGSFVALL GIAAGIA+WVLLNG NP+A Sbjct 241 YGLDAGRGWAHRPFIGSFVALLTGIAAGIAIWVLLNGVNPVA 282 >gi|240168934|ref|ZP_04747593.1| hypothetical protein MkanA1_06455 [Mycobacterium kansasii ATCC 12478] Length=281 Score = 387 bits (994), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 227/282 (81%), Positives = 247/282 (88%), Gaps = 4/282 (1%) Query 1 VTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFG-SGTTTVIPPYDAAS 59 +TSSNDSHWQRPD SPGP GRPVSASLVDPEDDL+P Y+GDFG +GTTTVIPPYD A+ Sbjct 1 MTSSNDSHWQRPDGSPGPTAGRPVSASLVDPEDDLSPGGYSGDFGNTGTTTVIPPYDPAN 60 Query 60 SGVGNSGYSLIEAAEPLPYVQPQP-GRQVPAGSAGIDMD-DDERVRAAGRRGTQNLGLLI 117 SG +SGY L++A EPLPY QPQP GR VP+ A ID+D DDERVRAAGRRGTQ+LGLL+ Sbjct 61 SGAVSSGYHLLDAQEPLPYAQPQPAGRPVPSAPA-IDIDADDERVRAAGRRGTQHLGLLV 119 Query 118 LRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLV 177 LRVGLGAVLIAHGLQKLFGWW G G+ GF+NSLSD+GYQHA+ILAYV AGGEIVAGVLLV Sbjct 120 LRVGLGAVLIAHGLQKLFGWWGGSGVTGFKNSLSDVGYQHADILAYVGAGGEIVAGVLLV 179 Query 178 LGLFTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGR 237 LGLFTPLAAAGALAFLINGLLA +SA+ YFL DG+EYQI+LVVMAVAVILSGPGR Sbjct 180 LGLFTPLAAAGALAFLINGLLAMVSARPHSHFTYFLPDGNEYQISLVVMAVAVILSGPGR 239 Query 238 YGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 YGLDA RGWA RPFIGSFVALL GIAAGIAVWV LNG NPLA Sbjct 240 YGLDAGRGWAQRPFIGSFVALLAGIAAGIAVWVFLNGVNPLA 281 >gi|41409138|ref|NP_961974.1| hypothetical protein MAP3040c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397958|gb|AAS05588.1| hypothetical protein MAP_3040c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459183|gb|EGO38130.1| putative membrane protein [Mycobacterium avium subsp. paratuberculosis S397] Length=286 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 198/285 (70%), Positives = 223/285 (79%), Gaps = 8/285 (2%) Query 1 VTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFG--SGTTTVIP-PYDA 57 + ND+HWQRP +SP P PGRP SA LVDPEDDLTP Y GDF +GTTTVIP A Sbjct 2 TSQPNDAHWQRPGESPEPTPGRPASARLVDPEDDLTPVGYPGDFNPSTGTTTVIPYGGAA 61 Query 58 ASSGVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDDE---RVRAAGRRGTQNLG 114 A +G G +GY L+E EPLPYVQP + A D+DDDE R+ GRRGTQ+LG Sbjct 62 AVAGSGAAGYHLLEQQEPLPYVQPHSAARH-AAPEPTDVDDDEHHDRLLDVGRRGTQHLG 120 Query 115 LLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGV 174 LL+LR GLG VL AHGLQKLFGWW G G+ G +NSLSD+GYQHA+ILAYVSAGGE+VAGV Sbjct 121 LLVLRAGLGVVLGAHGLQKLFGWWGGSGVTGLRNSLSDVGYQHADILAYVSAGGELVAGV 180 Query 175 LLVLGLFTPLAAAGALAFLINGLLAGISAQ-HSRPVAYFLQDGHEYQITLVVMAVAVILS 233 LLVLGLFTPLAAAGALAFLINGLLA +SA+ H+ ++FL GHEYQITL+VMA AVIL Sbjct 181 LLVLGLFTPLAAAGALAFLINGLLATVSARPHAHTFSFFLPQGHEYQITLIVMATAVILC 240 Query 234 GPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 GPGRYGLDA RGWAHRPFIGSFVALL GIAAG+ VWV LNG NP+ Sbjct 241 GPGRYGLDARRGWAHRPFIGSFVALLAGIAAGVGVWVALNGVNPI 285 >gi|342858171|ref|ZP_08714826.1| hypothetical protein MCOL_04836 [Mycobacterium colombiense CECT 3035] gi|342133875|gb|EGT87055.1| hypothetical protein MCOL_04836 [Mycobacterium colombiense CECT 3035] Length=287 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 200/285 (71%), Positives = 226/285 (80%), Gaps = 7/285 (2%) Query 1 VTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFG--SGTTTVIPPYDA- 57 + ND+HWQRP +SP P PGRP SA LVDPEDDLTP Y GDF +GTTTVIP A Sbjct 2 TSQPNDAHWQRPGESPEPTPGRPASARLVDPEDDLTPVGYPGDFNPSTGTTTVIPYGGAP 61 Query 58 ASSGVGNSGYSLIEAAEPLPYVQPQ-PGRQVPAGSAGIDMDDDERVRAA--GRRGTQNLG 114 A +G G GY+L+E EPLPYVQP P R SA ID DD+ R GRRGTQ+LG Sbjct 62 AVAGSGAGGYNLLEQQEPLPYVQPHSPARHAAPESADIDDDDEHHDRFHDVGRRGTQHLG 121 Query 115 LLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGV 174 LL+LRVGLG VL AHGLQKLFGWW G G+ GF+NSLSD+G+QHA+ILAYVSAGGE VAGV Sbjct 122 LLLLRVGLGVVLGAHGLQKLFGWWGGSGVTGFKNSLSDVGFQHADILAYVSAGGEAVAGV 181 Query 175 LLVLGLFTPLAAAGALAFLINGLLAGISAQ-HSRPVAYFLQDGHEYQITLVVMAVAVILS 233 LL+LGLFTP+AAAGALAFLINGLLA +SA+ H+R ++FL +GHEYQITL+VMA AVIL Sbjct 182 LLILGLFTPVAAAGALAFLINGLLASVSARPHTRTFSFFLPEGHEYQITLIVMAAAVILC 241 Query 234 GPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 GPGRYGLDA RGWAHRPFIGSFVALL GIAAG+ VWV LNG NP+ Sbjct 242 GPGRYGLDARRGWAHRPFIGSFVALLAGIAAGVGVWVALNGVNPI 286 >gi|118463083|ref|YP_883017.1| DoxX subfamily protein, putative [Mycobacterium avium 104] gi|254776275|ref|ZP_05217791.1| DoxX subfamily protein, putative [Mycobacterium avium subsp. avium ATCC 25291] gi|118164370|gb|ABK65267.1| DoxX subfamily protein, putative [Mycobacterium avium 104] Length=285 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 196/283 (70%), Positives = 221/283 (79%), Gaps = 5/283 (1%) Query 1 VTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFG--SGTTTVIP-PYDA 57 + ND+HWQRP +SP P PGRP SA LVDPEDDLTP Y GDF +GTTTVIP A Sbjct 2 TSQPNDAHWQRPGESPEPTPGRPASARLVDPEDDLTPVGYPGDFNPSTGTTTVIPYGGAA 61 Query 58 ASSGVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDD-ERVRAAGRRGTQNLGLL 116 A +G G +GY L+E EPLPYVQP + A D D+ +R+ GRRGTQ+LGLL Sbjct 62 AVAGSGAAGYHLLEQQEPLPYVQPHSAARHAAPEPTDDDDEHHDRLLDVGRRGTQHLGLL 121 Query 117 ILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLL 176 +LR GLG VL AHGLQKLFGWW G G+ G +NSLSD+GYQHA+ILAYVSAGGE+VAGVLL Sbjct 122 VLRAGLGVVLGAHGLQKLFGWWGGSGVTGLRNSLSDVGYQHADILAYVSAGGELVAGVLL 181 Query 177 VLGLFTPLAAAGALAFLINGLLAGISAQ-HSRPVAYFLQDGHEYQITLVVMAVAVILSGP 235 VLGLFTPLAAAGALAFLINGLLA ISA+ H+ ++FL GHEYQITL+VMA AVIL GP Sbjct 182 VLGLFTPLAAAGALAFLINGLLATISARPHAHTFSFFLPQGHEYQITLIVMATAVILCGP 241 Query 236 GRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 GRYGLDA RGWAHRPFIGSFVALL GIAAG+ VWV LNG NP+ Sbjct 242 GRYGLDARRGWAHRPFIGSFVALLAGIAAGVGVWVALNGVNPI 284 >gi|15827904|ref|NP_302167.1| hypothetical protein ML1698 [Mycobacterium leprae TN] gi|221230381|ref|YP_002503797.1| hypothetical protein MLBr_01698 [Mycobacterium leprae Br4923] gi|2414544|emb|CAB16433.1| hypothetical protein MLCB637.18 [Mycobacterium leprae] gi|13093457|emb|CAC30651.1| conserved membrane protein [Mycobacterium leprae] gi|219933488|emb|CAR71793.1| conserved membrane protein [Mycobacterium leprae Br4923] Length=277 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 191/279 (69%), Positives = 217/279 (78%), Gaps = 7/279 (2%) Query 3 SSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAAS-SG 61 S+D HW+RP + P P+PGRP SASLVDPEDDLTP Y GDFG TTTVIP D G Sbjct 4 QSHDEHWRRPGECPEPIPGRPASASLVDPEDDLTPVGYPGDFG--TTTVIPYSDPDHLKG 61 Query 62 VGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMD-DDERVRAAGRRGTQNLGLLILRV 120 G +GY+L++ EPLPYVQPQ R A ID D D+ER+ GRRGTQ+LGLL+LRV Sbjct 62 PGGTGYNLLDQQEPLPYVQPQ-ARHAVAEPTEIDSDQDNERLHTVGRRGTQHLGLLVLRV 120 Query 121 GLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGL 180 GLG VL A GL KLFGWW GQGL GF+NSL+ +GYQHA+ILAYVSAGGE VAGVLLVLGL Sbjct 121 GLGVVLAAQGLHKLFGWWGGQGLTGFKNSLTQVGYQHADILAYVSAGGEAVAGVLLVLGL 180 Query 181 FTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGL 240 F P+ AAGALAFLINGLLA + HS ++FL DG+E+QITL+VM V VIL GPGRYGL Sbjct 181 FAPVVAAGALAFLINGLLA--AWPHSPLFSFFLPDGNEHQITLIVMDVTVILCGPGRYGL 238 Query 241 DAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 DA R WA+RPFIGSF+ L+ GIAAGIAVWVLLNG NPLA Sbjct 239 DAGRRWAYRPFIGSFIVLIAGIAAGIAVWVLLNGVNPLA 277 >gi|296171271|ref|ZP_06852675.1| DoxX family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894239|gb|EFG73996.1| DoxX family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=258 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 188/258 (73%), Positives = 209/258 (82%), Gaps = 6/258 (2%) Query 28 LVDPEDDLTPARYAGDFG--SGTTTVIPPY--DAASSGVGNSGYSLIEAAEPLPYVQPQP 83 +VDPEDDLTP Y GDF +GTTTVIP AA G +GY++++ EPLPYVQPQP Sbjct 1 MVDPEDDLTPVGYPGDFNPSTGTTTVIPYMGDHAAVGGPRATGYNVLDQQEPLPYVQPQP 60 Query 84 GRQVPAGSAGIDMDDDE-RVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQG 142 R A ID D+ R+ GRRGTQ+LGLLILRVGLG VL AHGLQKLFGWW G G Sbjct 61 TRHAAAEPVEIDGDEHYGRLHDVGRRGTQHLGLLILRVGLGFVLAAHGLQKLFGWWGGSG 120 Query 143 LAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGIS 202 + GF+NSLSD+GYQHA+ILAYVSAGGE+VAGVLLVLGLFTP+AAAGALAFLINGLLA IS Sbjct 121 VGGFKNSLSDVGYQHADILAYVSAGGELVAGVLLVLGLFTPVAAAGALAFLINGLLATIS 180 Query 203 AQ-HSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGG 261 A+ H AYFL DGHEYQITL+V+AVAVIL GPGRYGLDA RGWAHRPFIGSFVALL G Sbjct 181 ARPHPHTFAYFLPDGHEYQITLIVVAVAVILCGPGRYGLDARRGWAHRPFIGSFVALLVG 240 Query 262 IAAGIAVWVLLNGANPLA 279 IAAG+AVWVLLNG NP+A Sbjct 241 IAAGVAVWVLLNGVNPIA 258 >gi|254819127|ref|ZP_05224128.1| hypothetical protein MintA_04330 [Mycobacterium intracellulare ATCC 13950] Length=286 Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 196/284 (70%), Positives = 223/284 (79%), Gaps = 6/284 (2%) Query 1 VTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFG--SGTTTVIP-PYDA 57 + ND+ WQRP +SP PGRP SA LVDPEDDLTP Y GDF +GTTTVIP A Sbjct 2 TSQPNDADWQRPGESPESTPGRPASARLVDPEDDLTPVGYPGDFNPSTGTTTVIPYGAAA 61 Query 58 ASSGVGNSGYSLIEAAEPLPYVQPQPGRQ--VPAGSAGIDMDDDERVRAAGRRGTQNLGL 115 A +G G SGY+L+E EPLPYVQP + P + D + D+R+ GRRGTQ+LGL Sbjct 62 AMAGSGASGYNLLEHQEPLPYVQPHSAARHAAPESTDIDDDEHDDRLHDVGRRGTQHLGL 121 Query 116 LILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVL 175 L+LRVGLG VL AHGLQKLFGWW G G+ GF+NSLSD+GYQHA+ILAYVSAGGE+VAGVL Sbjct 122 LVLRVGLGVVLGAHGLQKLFGWWGGSGVTGFRNSLSDVGYQHADILAYVSAGGELVAGVL 181 Query 176 LVLGLFTPLAAAGALAFLINGLLAGISAQ-HSRPVAYFLQDGHEYQITLVVMAVAVILSG 234 LVLGLFTPLAAAGALAFLINGLLA +SA+ H+ +YFL +GHEYQITL+ +A AVIL G Sbjct 182 LVLGLFTPLAAAGALAFLINGLLATVSARPHTHTFSYFLPEGHEYQITLIAVAAAVILCG 241 Query 235 PGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 PGRYGLDA RGWAHRPFIGSFVALL GIAAGI VWV LNG NP+ Sbjct 242 PGRYGLDARRGWAHRPFIGSFVALLAGIAAGIGVWVALNGVNPI 285 >gi|120403112|ref|YP_952941.1| DoxX family protein [Mycobacterium vanbaalenii PYR-1] gi|119955930|gb|ABM12935.1| DoxX family protein [Mycobacterium vanbaalenii PYR-1] Length=296 Score = 291 bits (745), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 166/286 (59%), Positives = 200/286 (70%), Gaps = 17/286 (5%) Query 1 VTSSND-SHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAAS 59 VTS +D WQRPDDS G RP SASLVDPEDDL A Y GDF TT IP YD+A Sbjct 21 VTSPHDPGPWQRPDDSAG----RPASASLVDPEDDLPSAHYGGDF---ETTAIPRYDSAK 73 Query 60 SGVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDDE-----RVRAAGRRGTQNLG 114 G ++L+ EPLPYVQP G + GS G E R RRGTQ+LG Sbjct 74 P-AGQQPFALLNEPEPLPYVQP--GTGLAPGSYGSTAAPTEVGVIDPDRRDDRRGTQDLG 130 Query 115 LLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGV 174 LL+LRV +G +LI HGLQK+FGWW G GL GF+++L+++G++HA+IL YV+AGG+I AGV Sbjct 131 LLVLRVAVGVLLIGHGLQKVFGWWGGPGLDGFRDTLTEVGFRHADILTYVAAGGQIAAGV 190 Query 175 LLVLGLFTPLAAAGALAFLINGLLAGISAQHSRP-VAYFLQDGHEYQITLVVMAVAVILS 233 LLV+GLFTP+AAAGAL +LI +LA + H ++ FL DGHEYQ+ LV A+IL Sbjct 191 LLVIGLFTPIAAAGALGYLITSVLAEATLAHEEARLSSFLTDGHEYQVVLVCAVAAIILV 250 Query 234 GPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 GPGRYGLDA RGWA RPF+GSF ALL GI AG+A+WVLLNG NPLA Sbjct 251 GPGRYGLDAGRGWARRPFVGSFAALLLGIGAGVAIWVLLNGTNPLA 296 >gi|118469364|ref|YP_886712.1| DoxX subfamily protein [Mycobacterium smegmatis str. MC2 155] gi|118170651|gb|ABK71547.1| DoxX subfamily protein, putative [Mycobacterium smegmatis str. MC2 155] Length=280 Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 163/285 (58%), Positives = 197/285 (70%), Gaps = 11/285 (3%) Query 1 VTSSNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASS 60 +TSS+ WQRPD+ RP ASLVDPEDDL A Y GDF TT IP YD S Sbjct 1 MTSSSQDPWQRPDNPGTGDSARPAGASLVDPEDDLPSASYGGDF---ETTAIPRYD--SK 55 Query 61 GVGNSGYSLIEAAEPLPYVQP---QPGRQVPAGSAGIDMDD--DERVRAAGRRGTQNLGL 115 S +S++ EPLPYVQP P PA ID +D D++VRAAGRRGTQ+LGL Sbjct 56 APDQSAFSMVSEPEPLPYVQPGLHAPMGAYPAEPVEIDRNDVVDDQVRAAGRRGTQDLGL 115 Query 116 LILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVL 175 LILRV +G +LI HGLQK FGWW G G GF SL D+G++++ IL YV+ GG+I AGVL Sbjct 116 LILRVAIGGLLILHGLQKAFGWWGGPGFDGFGTSLDDMGFKYSGILTYVATGGQIAAGVL 175 Query 176 LVLGLFTPLAAAGALAFLINGLLAGISAQHSRP-VAYFLQDGHEYQITLVVMAVAVILSG 234 LVLGLFTP+AAAGALA+ INGLLA H + ++ F DGH+Y++ ++ A+IL+G Sbjct 176 LVLGLFTPIAAAGALAYGINGLLAEAMIAHEQARLSEFFHDGHQYRLVILAATAAIILTG 235 Query 235 PGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 PGRYG DA RGWA RPF+GSFVALL GI AGI +W LLNG NPL+ Sbjct 236 PGRYGFDAGRGWARRPFVGSFVALLIGIGAGIGIWALLNGGNPLS 280 >gi|315445150|ref|YP_004078029.1| hypothetical protein Mspyr1_35860 [Mycobacterium sp. Spyr1] gi|315263453|gb|ADU00195.1| predicted membrane protein [Mycobacterium sp. Spyr1] Length=297 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 161/283 (57%), Positives = 198/283 (70%), Gaps = 12/283 (4%) Query 1 VTSSNDSH-WQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAAS 59 VTS D WQRPDDS G RP SASLVDPEDDL A Y GDF TT IP YD+A Sbjct 21 VTSPLDPRPWQRPDDSAG----RPASASLVDPEDDLPSANYGGDF---ETTAIPRYDSAK 73 Query 60 SGVGNSGYSLIEAAEPLPYVQPQPGRQVPA---GSAGIDMDDDERVRAAGRRGTQNLGLL 116 ++L+ EPLPYVQP G A +A ++ D + RRGTQ+LGLL Sbjct 74 PAEAQQPFALLNDPEPLPYVQPSTGLAPGAYGSAAAPTEVGVDPDRHSGDRRGTQDLGLL 133 Query 117 ILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLL 176 +LRV +GA+LI HGLQK+FG W G GL GF++ L+D+G+++A+IL+YV+AGG+I AGVLL Sbjct 134 LLRVAVGALLIGHGLQKVFGLWGGPGLGGFRDQLTDVGFRNADILSYVAAGGQIAAGVLL 193 Query 177 VLGLFTPLAAAGALAFLINGLLAGISAQHSRP-VAYFLQDGHEYQITLVVMAVAVILSGP 235 VLGLFTP+AAAGAL +L+ LA + H+ ++ FL DGHEYQI L+V A+IL GP Sbjct 194 VLGLFTPIAAAGALGYLVTATLAEATLAHNDARLSSFLTDGHEYQIVLLVAVAAIILVGP 253 Query 236 GRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 GRYGLDA RGWA RPF+GS AL+ G AG+A+WVLLNGANPL Sbjct 254 GRYGLDAGRGWARRPFVGSIAALILGAGAGVAIWVLLNGANPL 296 >gi|145224820|ref|YP_001135498.1| DoxX family protein [Mycobacterium gilvum PYR-GCK] gi|145217306|gb|ABP46710.1| DoxX family protein [Mycobacterium gilvum PYR-GCK] Length=297 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 161/283 (57%), Positives = 198/283 (70%), Gaps = 12/283 (4%) Query 1 VTSSNDSH-WQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAAS 59 VTS D WQRPDDS G RP SASLVDPEDDL A Y GDF TT IP YD+A Sbjct 21 VTSPLDPRPWQRPDDSAG----RPASASLVDPEDDLPSANYGGDF---ETTAIPRYDSAK 73 Query 60 SGVGNSGYSLIEAAEPLPYVQPQPGRQVPA---GSAGIDMDDDERVRAAGRRGTQNLGLL 116 ++L+ EPLPYVQP G A +A ++ D + RRGTQ+LGLL Sbjct 74 PADQQQPFALLNDPEPLPYVQPSIGLAPGAYGSTAAPTEVGVDPDRHSGDRRGTQDLGLL 133 Query 117 ILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLL 176 +LRV +GA+LI HGLQK+FG W G GL GF++ L+D+G+++A+IL+YV+AGG+I AGVLL Sbjct 134 LLRVAVGALLIGHGLQKVFGLWGGPGLGGFRDQLTDVGFRNADILSYVAAGGQIAAGVLL 193 Query 177 VLGLFTPLAAAGALAFLINGLLAGISAQHSRP-VAYFLQDGHEYQITLVVMAVAVILSGP 235 VLGLFTP+AAAGAL +L+ LA + H ++ FL DGHEYQI L+V+ A+IL GP Sbjct 194 VLGLFTPIAAAGALGYLVTATLAEATLAHDDARLSSFLTDGHEYQIVLLVVVAAIILVGP 253 Query 236 GRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 GRYGLDA RGWA RPF+GS AL+ G AG+A+WVLLNGANPL Sbjct 254 GRYGLDAGRGWARRPFVGSIAALILGAGAGVAIWVLLNGANPL 296 >gi|126434472|ref|YP_001070163.1| DoxX family protein [Mycobacterium sp. JLS] gi|126234272|gb|ABN97672.1| DoxX family protein [Mycobacterium sp. JLS] Length=277 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 168/275 (62%), Positives = 199/275 (73%), Gaps = 12/275 (4%) Query 9 WQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASSGVGNSGYS 68 WQRPDD P RP SASLVDPEDDL Y GDF TT IP YDAA ++ Sbjct 11 WQRPDD-----PARPTSASLVDPEDDLPSPNYGGDF---ETTAIPRYDAAKGAPAPPVFN 62 Query 69 LIEAAEPLPYVQPQPGRQV-PAGSAGIDMDDD---ERVRAAGRRGTQNLGLLILRVGLGA 124 L+ EPLPYVQP G V P G+ ++ D E+VRAA RRGTQ+LGL++LRVGLG Sbjct 63 LMNDPEPLPYVQPHTGHPVMPYGAEPTEIGHDIADEQVRAARRRGTQDLGLMLLRVGLGV 122 Query 125 VLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPL 184 +LI HGLQK FGWW G GL GFQ+SL+++GYQHA IL YV A +I AG+LLVLGLFTP+ Sbjct 123 LLIGHGLQKAFGWWGGPGLGGFQDSLAEVGYQHANILTYVGAAAQIGAGLLLVLGLFTPV 182 Query 185 AAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAAR 244 AAA ALA+LIN LLAG++ Q +FL G E+Q+TL+V+A A+IL+GPGRYG DA R Sbjct 183 AAAVALAYLINALLAGVAGQSDSGFPFFLPGGFEFQVTLIVIAAALILTGPGRYGFDAGR 242 Query 245 GWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 GWA RPF+GS VALL GI G+A+WVLLNGANPLA Sbjct 243 GWARRPFVGSVVALLFGIGLGVAMWVLLNGANPLA 277 >gi|108798872|ref|YP_639069.1| DoxX [Mycobacterium sp. MCS] gi|119867987|ref|YP_937939.1| DoxX family protein [Mycobacterium sp. KMS] gi|108769291|gb|ABG08013.1| DoxX [Mycobacterium sp. MCS] gi|119694076|gb|ABL91149.1| DoxX family protein [Mycobacterium sp. KMS] Length=277 Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 167/275 (61%), Positives = 199/275 (73%), Gaps = 12/275 (4%) Query 9 WQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASSGVGNSGYS 68 WQRPDD P RP SASLVDPEDDL Y GDF TT IP YDAA ++ Sbjct 11 WQRPDD-----PARPTSASLVDPEDDLPSPNYGGDF---ETTAIPRYDAAKGAPAPPVFN 62 Query 69 LIEAAEPLPYVQPQPGRQV-PAGSAGIDMDDD---ERVRAAGRRGTQNLGLLILRVGLGA 124 L+ EPLPYVQP G V P G+ ++ D E+VRAA RRGTQ+LGL++LRVGLG Sbjct 63 LMNDPEPLPYVQPHTGHPVMPYGAEPTEIGHDIADEQVRAARRRGTQDLGLMLLRVGLGV 122 Query 125 VLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPL 184 +LI HGLQK FGWW G GL GFQ+SL+++GYQHA IL Y+ A +I AG+LLVLGLFTP+ Sbjct 123 LLIGHGLQKAFGWWGGPGLGGFQDSLAEVGYQHANILTYLGAAAQIGAGLLLVLGLFTPV 182 Query 185 AAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAAR 244 AAA ALA+LIN LLAG++ Q +FL G E+Q+TL+V+A A+IL+GPGRYG DA R Sbjct 183 AAAVALAYLINALLAGVAGQSDSGFPFFLPSGFEFQVTLIVIAAALILTGPGRYGFDAGR 242 Query 245 GWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 GWA RPF+GS VALL GI G+A+WVLLNGANPLA Sbjct 243 GWARRPFVGSVVALLFGIGLGVAMWVLLNGANPLA 277 >gi|333991366|ref|YP_004523980.1| hypothetical protein JDM601_2726 [Mycobacterium sp. JDM601] gi|333487334|gb|AEF36726.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=236 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 145/240 (61%), Positives = 172/240 (72%), Gaps = 9/240 (3%) Query 40 YAGDFGSGTTTVIPPYDAASSGVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDD 99 Y GDF T IPPYD S Y+ PLPY +PQ GS G D D D Sbjct 6 YTGDF---ETAAIPPYDPTGSRPLGGDYN------PLPYAEPQATAGRVVGSGGADADTD 56 Query 100 ERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAE 159 + R RRGTQ+LGLL LR+GLG L+AHGL++LFGWW GQGL G ++S+++ GYQHA+ Sbjct 57 DPFRVVDRRGTQDLGLLFLRLGLGVSLVAHGLRQLFGWWGGQGLTGLKSSIAEAGYQHAD 116 Query 160 ILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEY 219 IL Y + GG+I AG+LLVLGLFTPLAAAGALA+LING+LAG+S+Q YFL DGHEY Sbjct 117 ILTYAAGGGQIAAGLLLVLGLFTPLAAAGALAYLINGVLAGVSSQSQGRFDYFLPDGHEY 176 Query 220 QITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 I L+V+AVA++L GPGRYGLD RGWA RPFIGS ALL GIA G+A+WV LNGANPLA Sbjct 177 HIMLIVVAVAIVLVGPGRYGLDGDRGWARRPFIGSVAALLLGIAGGVAMWVFLNGANPLA 236 >gi|169630413|ref|YP_001704062.1| hypothetical protein MAB_3332c [Mycobacterium abscessus ATCC 19977] gi|169242380|emb|CAM63408.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=268 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 137/261 (53%), Positives = 168/261 (65%), Gaps = 16/261 (6%) Query 27 SLVDPEDDLTPARYAGDFGSGTTTVIPPYDA----ASSGVGNSGYSLIEAAEPLPYVQPQ 82 LVDPEDD+ A Y GDF TT IP Y A +S V G L + A PLPY +P Sbjct 16 ELVDPEDDVPSATYGGDF---ETTAIPQYQAERLTSSHNVKEVG-PLYDPA-PLPYAEPA 70 Query 83 P----GRQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWW 138 V A A D A RRGTQ+LGLL+LRVG+GAVLIAHGL+K+FGWW Sbjct 71 TTQISAEAVHARHAAPWGTQDP---AGDRRGTQDLGLLLLRVGVGAVLIAHGLRKVFGWW 127 Query 139 DGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGLL 198 G GL+GF+ +L D G+++A+IL YV E+ AGVLLVLGL TPLA A ALAF +N LL Sbjct 128 GGTGLSGFEATLGDRGFKYADILTYVGVTAELGAGVLLVLGLLTPLAGAAALAFTVNVLL 187 Query 199 AGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVAL 258 + + + + A F +GHE+++ ++V VAVIL GPGRYG DA RGWA RPFIGSF A+ Sbjct 188 SDMVSDKANRYAIFWPEGHEFELLMIVAIVAVILVGPGRYGFDAGRGWARRPFIGSFAAV 247 Query 259 LGGIAAGIAVWVLLNGANPLA 279 + G A+WV LNG NPLA Sbjct 248 VLGFGGAAAIWVFLNGTNPLA 268 >gi|254552084|ref|ZP_05142531.1| hypothetical protein Mtube_16796 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=85 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%) Query 19 MPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASSGVGNSGYSLIEAAEPLPY 78 MPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASSGVGNSGYSLIEAAEPLPY Sbjct 1 MPGRPVSASLVDPEDDLTPARYAGDFGSGTTTVIPPYDAASSGVGNSGYSLIEAAEPLPY 60 Query 79 VQPQPGRQVPAGSAGIDMDDDERVR 103 VQPQPGRQVPAGSAGIDMDDDERVR Sbjct 61 VQPQPGRQVPAGSAGIDMDDDERVR 85 >gi|254552083|ref|ZP_05142530.1| hypothetical protein Mtube_16787 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=80 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%) Query 200 GISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALL 259 GISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALL Sbjct 1 GISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALL 60 Query 260 GGIAAGIAVWVLLNGANPLA 279 GGIAAGIAVWVLLNGANPLA Sbjct 61 GGIAAGIAVWVLLNGANPLA 80 >gi|226365944|ref|YP_002783727.1| hypothetical protein ROP_65350 [Rhodococcus opacus B4] gi|226244434|dbj|BAH54782.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=291 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 92/172 (54%), Positives = 116/172 (68%), Gaps = 4/172 (2%) Query 108 RGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAG 167 RGT +LGLL LR+ +G + HGLQKL G W+G GL GF+ L + G+Q A++LA + A Sbjct 122 RGTLDLGLLALRLAVGGTALVHGLQKLTGMWNGPGLDGFEEVLVNAGFQQAKLLAILGAI 181 Query 168 GEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRP-VAYFLQDGHEYQITLVVM 226 GE+ G LL+LGL TPLAAA LA +IN A Q + P + YF G EY+ L V Sbjct 182 GEVAGGALLILGLVTPLAAASVLAVMIN---AWAFRQIAEPGLEYFAPSGTEYETLLGVC 238 Query 227 AVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 A +IL+GPGR LD RGWA RPFIGSF AL+ G+AAG+ +W+ LNGANPL Sbjct 239 AGVIILTGPGRISLDGRRGWATRPFIGSFAALILGVAAGVCIWIFLNGANPL 290 >gi|111023443|ref|YP_706415.1| hypothetical protein RHA1_ro06482 [Rhodococcus jostii RHA1] gi|110822973|gb|ABG98257.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=315 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 93/172 (55%), Positives = 116/172 (68%), Gaps = 4/172 (2%) Query 108 RGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAG 167 RGT +LGLL LR+ +G + HGLQKL G W+G GL GF+ L + G+Q A++LA + A Sbjct 146 RGTLDLGLLALRLAVGGTALVHGLQKLTGMWNGPGLDGFEEVLVNSGFQQAKLLAILGAI 205 Query 168 GEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRP-VAYFLQDGHEYQITLVVM 226 GE+ G LL+LGL TPLAAA LA +IN A Q + P + YF G EY+ L V Sbjct 206 GEVAGGALLILGLVTPLAAASVLAVMIN---AWAFRQIAEPGLEYFAPAGTEYETLLGVC 262 Query 227 AVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 A +IL+GPGR LD RGWA RPFIGSF AL+ G+AAG+ VW+ LNGANPL Sbjct 263 AGVIILTGPGRISLDGRRGWATRPFIGSFAALILGVAAGVCVWIFLNGANPL 314 >gi|312140497|ref|YP_004007833.1| integral membrane protein [Rhodococcus equi 103S] gi|311889836|emb|CBH49153.1| putative integral membrane protein [Rhodococcus equi 103S] Length=299 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/172 (50%), Positives = 110/172 (64%), Gaps = 2/172 (1%) Query 107 RRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSA 166 RRGT ++GL +LR+ +G L+AHGLQKL GWW+G GL G+++ L G+ HA LA A Sbjct 129 RRGTLDVGLFVLRLAVGGTLLAHGLQKLTGWWNGPGLGGYRDDLVTAGFDHARALAVAGA 188 Query 167 GGEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVM 226 GE+ G LL+LGL TP A A LA +IN SA + YF DG EY+ L Sbjct 189 VGEVAGGALLILGLLTPFAGAAVLAVMINAWCLKQSALPG--LEYFAPDGVEYETLLGAA 246 Query 227 AVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 A A++L+GPGR LD R WA RP +GS V LL G+AAG+ VW + NGANP+ Sbjct 247 AAAIVLTGPGRIALDGRRKWATRPHVGSVVILLVGVAAGLTVWFVFNGANPV 298 >gi|325675884|ref|ZP_08155568.1| DoxX protein [Rhodococcus equi ATCC 33707] gi|325553855|gb|EGD23533.1| DoxX protein [Rhodococcus equi ATCC 33707] Length=299 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 86/172 (50%), Positives = 110/172 (64%), Gaps = 2/172 (1%) Query 107 RRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSA 166 RRGT ++GL +LR+ +G L+AHGLQKL GWW+G GL G+++ L G+ HA LA A Sbjct 129 RRGTLDVGLFVLRLAVGGTLLAHGLQKLTGWWNGPGLGGYRDDLVTAGFDHARALAVAGA 188 Query 167 GGEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVM 226 GE+ G LL+LGL TP A A LA +IN SA + YF DG EY+ L Sbjct 189 VGEVAGGALLILGLLTPFAGAAVLAVMINAWCLKQSALPG--LEYFAPDGVEYETLLGAA 246 Query 227 AVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 A A++L+GPGR LD R WA RP +GS V LL G+AAG+ VW + NGANP+ Sbjct 247 AAAIVLTGPGRIALDGRRKWATRPHVGSVVILLVGVAAGLTVWFVFNGANPV 298 >gi|296140561|ref|YP_003647804.1| DoxX family protein [Tsukamurella paurometabola DSM 20162] gi|296028695|gb|ADG79465.1| DoxX family protein [Tsukamurella paurometabola DSM 20162] Length=378 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 92/215 (43%), Positives = 133/215 (62%), Gaps = 23/215 (10%) Query 87 VPAGSAGIDM--------------DDDERVRAA---GRRGTQNLGLLILRVGLGAVLIAH 129 +PAG+A D+ D+ E +RAA +RGT +LGLL+LRV +G +L AH Sbjct 161 IPAGAAATDVLEPPRGRRFGKPVGDESEELRAAKQAAKRGTTDLGLLVLRVAVGVILAAH 220 Query 130 GLQKLFGWWDGQGLAGFQNSLSD-----IGYQHAEILAYVSAGG-EIVAGVLLVLGLFTP 183 G QKLFG W G G+ GF L + +G++ + VS G E+ +GV+L++GL TP Sbjct 221 GAQKLFGIWGGPGIDGFTKYLQNGADPSLGFERFTKVIAVSTGVVELGSGVMLIIGLLTP 280 Query 184 LAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAA 243 +AAAGA+ +++ L ++ S V + G E+++ L+ +VA+IL+GPG+ LD Sbjct 281 IAAAGAVGVMLSATLFKLTTLGSGFVFFSQDKGVEFELLLLFASVAIILTGPGKLSLDFN 340 Query 244 RGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 RGWA RP IGSFV L+ +AA + VW+LLNGANPL Sbjct 341 RGWARRPHIGSFVWLVIAVAAAVTVWILLNGANPL 375 >gi|262203123|ref|YP_003274331.1| DoxX family protein [Gordonia bronchialis DSM 43247] gi|262086470|gb|ACY22438.1| DoxX family protein [Gordonia bronchialis DSM 43247] Length=405 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 91/202 (46%), Positives = 125/202 (62%), Gaps = 13/202 (6%) Query 85 RQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLA 144 R VPA A D+ + +A RRGT +LGLL+LRV +GA+ + HGLQKLFG W+G L+ Sbjct 201 RDVPAVVAAEDL---QEAKAKARRGTLDLGLLLLRVAVGAIALGHGLQKLFGLWNGPRLS 257 Query 145 GFQNSL-----SDIGYQH--AEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGL 197 GF++ L DIG+ A+ LA + A E V G +++LGL TP+ A+ L ++ + Sbjct 258 GFEDMLVNAPNPDIGFNADLAKPLAILGAVSETVGGAMVILGLLTPVGASAILGTML--V 315 Query 198 LAGISAQHSRPVAYFLQDGH-EYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFV 256 A + A+F DG EY++ L V A +IL+GPG Y LD GWA RPF+GSF+ Sbjct 316 AATFKVTTAGGFAFFATDGGVEYELMLAVAAAVIILTGPGLYSLDFPYGWARRPFLGSFL 375 Query 257 ALLGGIAAGIAVWVLLNGANPL 278 L+ GIAA + +WVL NG NPL Sbjct 376 WLIVGIAAAVLIWVLCNGTNPL 397 >gi|229493403|ref|ZP_04387192.1| DoxX family protein [Rhodococcus erythropolis SK121] gi|229319719|gb|EEN85551.1| DoxX family protein [Rhodococcus erythropolis SK121] Length=275 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 91/172 (53%), Positives = 116/172 (68%), Gaps = 4/172 (2%) Query 108 RGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAG 167 RGT +LGLL LR+ +G + HGLQKL G W+G GL GF++ L+D G+Q A+ +A + A Sbjct 106 RGTLDLGLLALRLAVGGTALVHGLQKLTGIWNGPGLNGFESMLADAGFQQAKWMAILGAV 165 Query 168 GEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRP-VAYFLQDGHEYQITLVVM 226 GE+ G LL+LGL TP+AAA LA +IN A Q S P + YF G EY++ L + Sbjct 166 GEVAGGALLILGLLTPVAAASVLAVMIN---AWALRQASAPGLEYFAPAGTEYEMLLGIC 222 Query 227 AVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 A +IL+GPGR LD RGWA RPFIGS V L+ GIAAG+ W+ LNGANPL Sbjct 223 AGVIILTGPGRIALDGRRGWATRPFIGSLVVLILGIAAGVCTWIFLNGANPL 274 >gi|343926857|ref|ZP_08766350.1| hypothetical protein GOALK_072_00790 [Gordonia alkanivorans NBRC 16433] gi|343763217|dbj|GAA13276.1| hypothetical protein GOALK_072_00790 [Gordonia alkanivorans NBRC 16433] Length=382 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 91/185 (50%), Positives = 118/185 (64%), Gaps = 5/185 (2%) Query 97 DDDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQ 156 DD E A RRGT +LGLL+LR+ LG + AHGLQKLFG W+G L+GF+ L D G+ Sbjct 199 DDLEDALAKSRRGTLDLGLLLLRIALGGFVGAHGLQKLFGLWNGPRLSGFEQMLVDGGFN 258 Query 157 --HAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQ 214 +A+ILA V A E V G++++LGL TP+ A+ L ++ +SA +F Sbjct 259 ADYAQILAIVGALAETVGGLMVILGLLTPIGASAILGTMLVAAAYRVSAAGG--FEFFAA 316 Query 215 -DGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLN 273 G EY++ L A AVIL+GPG Y LD RGWA RPF+GSFV L+ GI A +AVW+L N Sbjct 317 AQGAEYELFLAATAAAVILTGPGLYSLDYPRGWARRPFVGSFVWLIVGIGAAVAVWILAN 376 Query 274 GANPL 278 G NPL Sbjct 377 GTNPL 381 >gi|226305880|ref|YP_002765840.1| hypothetical protein RER_23930 [Rhodococcus erythropolis PR4] gi|226184997|dbj|BAH33101.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=275 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/172 (53%), Positives = 115/172 (67%), Gaps = 4/172 (2%) Query 108 RGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAG 167 RGT +LGLL LR+ +G + HGLQKL G W+G GL GF+ L+D G+Q A+ +A + A Sbjct 106 RGTLDLGLLALRLAVGGTALVHGLQKLTGIWNGPGLGGFETMLADAGFQQAKWMAILGAV 165 Query 168 GEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRP-VAYFLQDGHEYQITLVVM 226 GE+ G LL+LGL TP+AAA LA +IN A Q S P + YF G EY++ L + Sbjct 166 GEVAGGALLILGLLTPVAAASVLAVMIN---AWALRQASAPGLEYFAPAGTEYEMLLGIC 222 Query 227 AVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 A +IL+GPGR LD RGWA RPF+GS V L+ GIAAG+ W+ LNGANPL Sbjct 223 AGVIILTGPGRISLDGRRGWATRPFVGSLVVLILGIAAGVCTWIFLNGANPL 274 >gi|134102599|ref|YP_001108260.1| hypothetical protein SACE_6162 [Saccharopolyspora erythraea NRRL 2338] gi|133915222|emb|CAM05335.1| hypothetical protein SACE_6162 [Saccharopolyspora erythraea NRRL 2338] Length=242 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/161 (46%), Positives = 99/161 (62%), Gaps = 7/161 (4%) Query 112 NLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIV 171 +LGLL++R+ LG + AHG QKLFG G G GF +L+ +G+Q A L+ V+ G E+ Sbjct 86 DLGLLVMRLVLGGIFAAHGAQKLFGALGGPGPEGFAQALTGMGFQQAATLSLVTGGTELG 145 Query 172 AGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVI 231 AG LLVLGLFTPLAAAG I G++A A + G E+++TL MA+ ++ Sbjct 146 AGALLVLGLFTPLAAAG-----IVGVMANAVALKFGSGFFASGGGVEFEVTLGAMALGLM 200 Query 232 LSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLL 272 +GPGR LD R W RP I F++L+ IAAG + VLL Sbjct 201 FTGPGRVALDYGRVWFRRPLIFGFISLV--IAAGASAAVLL 239 >gi|291004716|ref|ZP_06562689.1| hypothetical protein SeryN2_09364 [Saccharopolyspora erythraea NRRL 2338] Length=221 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 73/161 (46%), Positives = 99/161 (62%), Gaps = 7/161 (4%) Query 112 NLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIV 171 +LGLL++R+ LG + AHG QKLFG G G GF +L+ +G+Q A L+ V+ G E+ Sbjct 65 DLGLLVMRLVLGGIFAAHGAQKLFGALGGPGPEGFAQALTGMGFQQAATLSLVTGGTELG 124 Query 172 AGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVI 231 AG LLVLGLFTPLAAAG I G++A A + G E+++TL MA+ ++ Sbjct 125 AGALLVLGLFTPLAAAG-----IVGVMANAVALKFGSGFFASGGGVEFEVTLGAMALGLM 179 Query 232 LSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLL 272 +GPGR LD R W RP I F++L+ IAAG + VLL Sbjct 180 FTGPGRVALDYGRVWFRRPLIFGFISLV--IAAGASAAVLL 218 >gi|319948235|ref|ZP_08022391.1| DoxX family protein [Dietzia cinnamea P4] gi|319438110|gb|EFV93074.1| DoxX family protein [Dietzia cinnamea P4] Length=276 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 77/209 (37%), Positives = 111/209 (54%), Gaps = 14/209 (6%) Query 71 EAAEPLPYVQPQPGRQVPAGSAGIDMDDDERVRAAGRRGTQNLGLLILRVGLGAVLIAHG 130 + + PLP+ + QP PA R GRRGT +LGL +LR+ +G +L G Sbjct 69 DMSAPLPFGE-QPTTIAPA-----------RRDDIGRRGTIDLGLFVLRLAVGVLLAMRG 116 Query 131 LQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGAL 190 LQKL G + G G+ GF +L+D G+ A LA E+VAGV+LV+GL TP+AAAG L Sbjct 117 LQKLAGLFGGPGIDGFTQTLADSGFDMARALAIAGGTVELVAGVMLVVGLATPIAAAGLL 176 Query 191 AFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRP 250 + G+ ++ PV G E I + ++ +GPGR+ D GW+H P Sbjct 177 GMIGLGIAVRLTGADPIPVLSDTARGLEPSILYAAALLTLLFTGPGRWSADRRWGWSHLP 236 Query 251 -FIGSFVALLGGIAAGIAVWVLLNGANPL 278 F G ++ + AG+ +W LNG +PL Sbjct 237 RFSGVVWLVIVLVLAGV-LWYFLNGTSPL 264 >gi|326381534|ref|ZP_08203228.1| DoxX family protein [Gordonia neofelifaecis NRRL B-59395] gi|326199781|gb|EGD56961.1| DoxX family protein [Gordonia neofelifaecis NRRL B-59395] Length=383 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 88/233 (38%), Positives = 122/233 (53%), Gaps = 40/233 (17%) Query 75 PLPYVQPQPGRQVPAGSAGIDMDDDERV----------------RAAGRRGTQNLGLLIL 118 PLPY++PQP + ID+DD+ RRGT +LGLLIL Sbjct 154 PLPYIEPQP-------TTPIDLDDEYEAGGPIVDDAAEPPVVGDVPVARRGTIDLGLLIL 206 Query 119 RVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSD-----IGYQHA--EILAYVSAGGEIV 171 R+ +G HGLQKL GW +G G GF L++ +G+ + LA VS E Sbjct 207 RIAVGVTFTLHGLQKLTGWMNGPGPDGFAQYLANRPNPALGFHDSATTTLALVSGVSETA 266 Query 172 AGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRP--VAYFLQDGH----EYQITLVV 225 G+LL+LGL TP+A A L+ G+L ++ + + + +F DG E +I L Sbjct 267 GGILLILGLLTPIAGAA----LLGGILVAMAYKATLAGGLWFFTADGAGNGLELEILLAA 322 Query 226 MAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 + A+IL+GPG Y D GW+ RP GS ++ I A +AVW+LLNGANPL Sbjct 323 ASAALILTGPGTYSFDRRWGWSRRPSWGSAAWVIVAIGAAVAVWILLNGANPL 375 >gi|227548053|ref|ZP_03978102.1| DoxX family protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079851|gb|EEI17814.1| DoxX family protein [Corynebacterium lipophiloflavum DSM 44291] Length=267 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/218 (34%), Positives = 112/218 (52%), Gaps = 19/218 (8%) Query 73 AEPLPYVQPQPGRQV-----PAGSAGIDMDDDERVRAAGRRGTQNLGLLILRVGLGAVLI 127 ++P + P P V PA + ++ RRGT +LGLLILR LG L+ Sbjct 58 SQPTQSIDPDPAPLVAPVAEPAYIEPVYAEEPVTTAVDARRGTIDLGLLILRFVLGGYLV 117 Query 128 AHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAA 187 H +Q F +G+AG + Y + +LA V E+ AGV +VLGL +P+AA Sbjct 118 FHAIQTFFQLGAAEGIAGLEAQFG--AYTYGNVLAVVVPTLELAAGVFIVLGLLSPVAAM 175 Query 188 GALAFLINGLLAGISAQHS----RPVAYFLQDGHEYQITLVVMAVAVI--LSGPGRYGLD 241 A+A + G +A +A + P+ + G E +T++++ +A+ +GPG Y +D Sbjct 176 VAIA--VTGFMAAHTAASAGTGFNPIGW----GAEVWLTMILLGIALAHQFTGPGFYAVD 229 Query 242 AARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPLA 279 + RGWA RP S++ + GIAA +W G NP+A Sbjct 230 SGRGWARRPLASSWIFAVLGIAAAALMWWFGTGINPIA 267 >gi|256380018|ref|YP_003103678.1| DoxX family protein [Actinosynnema mirum DSM 43827] gi|255924321|gb|ACU39832.1| DoxX family protein [Actinosynnema mirum DSM 43827] Length=283 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/126 (47%), Positives = 76/126 (61%), Gaps = 6/126 (4%) Query 125 VLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPL 184 V HGLQK+FG +DG GL F L+ IGYQ + +LA+V+ E+V GVLL+LG TPL Sbjct 141 VFTGHGLQKVFGLFDGPGLDAFGKVLASIGYQQSGLLAWVTGLTELVGGVLLILGFATPL 200 Query 185 AAAGALAFLINGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAAR 244 AAAG L + N LL + +FL DG E++ L A+ V+ +GPGR LD R Sbjct 201 AAAGVLGVMANVLLLNYTN------GFFLPDGVEFEAALAAAALGVLFAGPGRVSLDHRR 254 Query 245 GWAHRP 250 W HRP Sbjct 255 PWFHRP 260 >gi|336325932|ref|YP_004605898.1| hypothetical protein CRES_1379 [Corynebacterium resistens DSM 45100] gi|336101914|gb|AEI09734.1| hypothetical protein CRES_1379 [Corynebacterium resistens DSM 45100] Length=359 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/204 (33%), Positives = 107/204 (53%), Gaps = 15/204 (7%) Query 86 QVPAGS-----AGIDMDDD----ERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFG 136 +PAG+ A +D D A +RGT GL +LR+ GA+L+ +GLQ LF Sbjct 159 HIPAGAGTPDPATVDASDQGDTVSETSAHDKRGTMGFGLFLLRIVAGALLLIYGLQTLFA 218 Query 137 WWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAA--GALAFLI 194 + GL + LS Y+ A++LA + G++ AG LL+LGL TP+ AA ++ + Sbjct 219 FGGNPGLNSLEGLLSQ--YKFADLLAVGLSIGQVAAGGLLILGLVTPVGAAIGAVVSAFL 276 Query 195 NGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGS 254 G G S + P Y + + L ++ +A+I +GPGR +D RGWA RP + Sbjct 277 TGHYLGASGGNLWP--YAMSPQSQLWGLLALICMALIFTGPGRISVDRNRGWARRPLASA 334 Query 255 FVALLGGIAAGIAVWVLLNGANPL 278 ++ L + A+W+++ G NP+ Sbjct 335 WIFALIAVGGAAALWLVVGGGNPV 358 >gi|302330577|gb|ADL20771.1| Hypothetical protein Cp1002_0883 [Corynebacterium pseudotuberculosis 1002] Length=358 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/235 (33%), Positives = 108/235 (46%), Gaps = 20/235 (8%) Query 47 GTTTVIPPYDAASSGVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDDERVRAAG 106 ++TV+PP A+ +E P+ V PQP D V AA Sbjct 140 ASSTVVPPTPVAAPTTTAFAEPQLEQVPPVSPVAPQP-----------DPASAHAVAAAA 188 Query 107 RRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSA 166 +RGT + GL +LR+ GA LI +Q F + G+ G Q+ S Y +A LA Sbjct 189 KRGTIDFGLFVLRIVFGAWLILDAVQVFFAMGNSGGINGLQDQFS--SYAYASTLAVAVP 246 Query 167 GGEIVAGVLLVLGLFTPLAAAGAL---AFLINGLLAGISAQHSRPVAYFLQDGHEYQITL 223 E+ AGV LV GL TP+AAA A +FL +A A + L D + L Sbjct 247 AMELAAGVFLVFGLLTPVAAAVATVVTSFLTLHHIASADALNLTD----LNDSIWFAFFL 302 Query 224 VVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 +++ + +GPG D +R WA RP S+V ++ GIA +A+W NPL Sbjct 303 TTISLVLQFTGPGLISFDVSRSWAKRPLASSWVFVVLGIAGAVALWWFGAAVNPL 357 >gi|331695663|ref|YP_004331902.1| DoxX family protein [Pseudonocardia dioxanivorans CB1190] gi|326950352|gb|AEA24049.1| DoxX family protein [Pseudonocardia dioxanivorans CB1190] Length=198 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 98/200 (49%), Gaps = 13/200 (6%) Query 82 QPGRQVPAGSAGIDMDDDERVRAAGR----RGTQNLGLLILRVGLGAVLIAHGLQKLFGW 137 +P R G+ G + R R G ++GLLILR+ +G + AHG QK+FG Sbjct 3 EPTRSFDIGTLGGSEPSNSTTRPERRPVPSNGAADIGLLILRLAVGGLFFAHGAQKVFGM 62 Query 138 WDGQGLAGFQNSLSDIGYQHAEI-LAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLING 196 W GQG+ +L+ G+ + LA+ E+ AG +VLGLFTPLAAAG LA + Sbjct 63 WGGQGITRTAENLAGYGFVAQQTSLAWALGIVEMAAGAFVVLGLFTPLAAAGLLAIKVVA 122 Query 197 LLAGISAQHSRPVAYFLQ---DGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIG 253 LL I A + +F D E I L A ++ +G GR LD R W RP Sbjct 123 LLVKIPA-----IEFFAAQAPDAIEVDILLGAGAATLMFAGAGRIALDNGRTWLRRPMPY 177 Query 254 SFVALLGGIAAGIAVWVLLN 273 + V L+ +A + V + L Sbjct 178 AVVCLIVTVAIVLVVMLTLR 197 >gi|302206024|gb|ADL10366.1| Hypothetical protein CpC231_0885 [Corynebacterium pseudotuberculosis C231] gi|308276260|gb|ADO26159.1| Putative membrane protein [Corynebacterium pseudotuberculosis I19] gi|341824694|gb|AEK92215.1| Hypothetical protein CpPAT10_0884 [Corynebacterium pseudotuberculosis PAT10] Length=474 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 76/235 (33%), Positives = 108/235 (46%), Gaps = 20/235 (8%) Query 47 GTTTVIPPYDAASSGVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDDERVRAAG 106 ++TV+PP A+ +E P+ V PQP D V AA Sbjct 256 ASSTVVPPTPVAAPTTTAFAEPQLEQVPPVSPVAPQP-----------DPASAHAVAAAA 304 Query 107 RRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSA 166 +RGT + GL +LR+ GA LI +Q F + G+ G Q+ S Y +A LA Sbjct 305 KRGTIDFGLFVLRIVFGAWLILDAVQVFFAMGNSGGINGLQDQFS--SYAYASTLAVAVP 362 Query 167 GGEIVAGVLLVLGLFTPLAAAGAL---AFLINGLLAGISAQHSRPVAYFLQDGHEYQITL 223 E+ AGV LV GL TP+AAA A +FL +A A + L D + L Sbjct 363 AMELAAGVFLVFGLLTPVAAAVATVVTSFLTLHHIASADALN----LTDLNDSIWFAFFL 418 Query 224 VVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 +++ + +GPG D +R WA RP S+V ++ GIA +A+W NPL Sbjct 419 TTISLVLQFTGPGLISFDVSRSWAKRPLASSWVFVVLGIAGAVALWWFGAAVNPL 473 >gi|300858303|ref|YP_003783286.1| hypothetical protein cpfrc_00885 [Corynebacterium pseudotuberculosis FRC41] gi|300685757|gb|ADK28679.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] Length=474 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 76/235 (33%), Positives = 108/235 (46%), Gaps = 20/235 (8%) Query 47 GTTTVIPPYDAASSGVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDMDDDERVRAAG 106 ++TV+PP A+ +E P+ V PQP D V AA Sbjct 256 ASSTVVPPTPVAAPTTTAFAEPQLEQVPPVSPVAPQP-----------DPASAHAVAAAA 304 Query 107 RRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSA 166 +RGT + GL +LR+ GA LI +Q F + G+ G Q+ S Y +A LA Sbjct 305 KRGTIDFGLFVLRIVFGAWLILDAVQVFFAMGNSGGINGLQDQFS--SYAYASTLAVAVP 362 Query 167 GGEIVAGVLLVLGLFTPLAAAGAL---AFLINGLLAGISAQHSRPVAYFLQDGHEYQITL 223 E+ AGV LV GL TP+AAA A +FL +A A + L D + L Sbjct 363 AMELAAGVFLVFGLLTPVAAAVATVVTSFLTLHHIASADALN----LTDLNDSIWFAFFL 418 Query 224 VVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 +++ + +GPG D +R WA RP S+V ++ GIA +A+W NPL Sbjct 419 TTISLVLQFTGPGLISFDVSRSWAKRPLASSWVFVVLGIAGAVALWWFGAAVNPL 473 >gi|311740563|ref|ZP_07714390.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304083|gb|EFQ80159.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] Length=316 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/196 (34%), Positives = 98/196 (50%), Gaps = 26/196 (13%) Query 95 DMDDDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIG 154 + ++ E + GRRGT + GLL +R+ L A LI G + F D +GL+G + ++ Sbjct 134 EQEEKEGYQRYGRRGTIDFGLLFIRLALSAYLIVAGAKTFFTLGDSEGLSGLEGDFANYA 193 Query 155 YQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQH--------- 205 + A L+ +++AGV L+LGL TPLAA ++ ++ G +A H Sbjct 194 WDTA--LSIAVPTMQLIAGVFLLLGLITPLAA------MLGLVVTGFTAVHELAQTDAGL 245 Query 206 ---SRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGI 262 S P + +L + L V+AV + +GPG LD R WA RP S+ +L GI Sbjct 246 DVFSWPESVWLS------LVLFVIAVGLQFTGPGFISLDFKRSWARRPLGTSWAFVLIGI 299 Query 263 AAGIAVWVLLNGANPL 278 A A+W G NPL Sbjct 300 ATLAALWFFGAGVNPL 315 >gi|227501744|ref|ZP_03931793.1| DoxX family protein [Corynebacterium accolens ATCC 49725] gi|306835923|ref|ZP_07468916.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] gi|227077769|gb|EEI15732.1| DoxX family protein [Corynebacterium accolens ATCC 49725] gi|304568197|gb|EFM43769.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] Length=296 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 60/191 (32%), Positives = 98/191 (52%), Gaps = 14/191 (7%) Query 95 DMDDDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIG 154 + +D E + GRRGT + GL +R+ + A LI G+ F DG G++G + S Sbjct 114 EQEDKEGYKRYGRRGTIDFGLFFVRLAMSAYLIIAGVSTFFSLGDGSGVSGLEGDYSQYA 173 Query 155 YQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSRPVA---- 210 + ++ LA + +++AG L+LGL +PLAA ++ ++ G +A H + Sbjct 174 WANSFALAVPTV--QLIAGAFLLLGLISPLAA------MLGLVVTGFTALHELAESGAGL 225 Query 211 --YFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAV 268 + D + L ++A+ + +GPG LD R WA RP S+V ++ GIA +AV Sbjct 226 QVFDWPDSVWLSLVLFIIAIGLQFTGPGFISLDFGRSWARRPLGTSWVFVVVGIAILVAV 285 Query 269 WVLLNGANPLA 279 WV NP+A Sbjct 286 WVFGAAVNPIA 296 >gi|255324568|ref|ZP_05365685.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|255298474|gb|EET77774.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] Length=316 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 65/196 (34%), Positives = 97/196 (50%), Gaps = 26/196 (13%) Query 95 DMDDDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIG 154 + ++ E + GRRGT + GL +R+ L A LI G + F D +GL+G + ++ Sbjct 134 EQEEKEGYQRYGRRGTIDFGLFFIRLALSAYLIVAGAKTFFTLGDSEGLSGLEGDFANYA 193 Query 155 YQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQH--------- 205 + A L+ +++AGV L+LGL TPLAA +I ++ G +A H Sbjct 194 WDTA--LSIAVPTMQLIAGVFLLLGLITPLAA------MIGLVVTGFTAVHELAQTDAGL 245 Query 206 ---SRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGI 262 S P + +L + L V+AV + +GPG LD R WA RP S+ +L GI Sbjct 246 DVFSWPESVWLS------LILFVIAVGLQFTGPGFISLDFKRSWARRPLGTSWAFVLIGI 299 Query 263 AAGIAVWVLLNGANPL 278 A A+W G NPL Sbjct 300 AILAALWFFGAGVNPL 315 >gi|334696672|gb|AEG81469.1| putative membrane protein [Corynebacterium ulcerans 809] Length=505 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 64/177 (37%), Positives = 88/177 (50%), Gaps = 9/177 (5%) Query 105 AGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYV 164 A +RGT + GLL+LRV GA LI +Q F + G+ G Q+ S Y +A LA Sbjct 334 AAKRGTIDFGLLVLRVVFGAWLILDAVQVFFAMGNSGGINGLQDQFS--SYAYASTLAVA 391 Query 165 SAGGEIVAGVLLVLGLFTPLAAAGAL---AFLINGLLAGISAQHSRPVAYFLQDGHEYQI 221 E+ AGV LV GL TP+AAA A +FL +A A + L D + Sbjct 392 VPAMELAAGVFLVFGLLTPVAAAVATVVTSFLTVHHIASAEALN----LLDLNDSIWFAF 447 Query 222 TLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 L +++ + +GPG D +R WA RP S+V + GIA +A+W NPL Sbjct 448 FLTTISLVLQFTGPGLISFDVSRSWAKRPLASSWVFAILGIAGAVALWWFGAAVNPL 504 >gi|227488048|ref|ZP_03918364.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227091910|gb|EEI27222.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length=298 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 65/185 (36%), Positives = 97/185 (53%), Gaps = 5/185 (2%) Query 96 MDDDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGY 155 +++ E A RRGT + GLL+LR+ G L+ ++ F DG GLAG +++ + Y Sbjct 118 VEEPEEEIADSRRGTIDFGLLLLRLAFGGFLVFEAIKVFFNLGDGGGLAGMKDAFAS--Y 175 Query 156 QHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFL-INGLLAGISAQHSRPVAYFLQ 214 +LA E+ AGV LVLGL TP+AAA AL N L + Q+ + + Sbjct 176 SIPTVLAIAVPAIELTAGVFLVLGLLTPVAAALALVATGFNAL--HMFVQNDTTSLFSVS 233 Query 215 DGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNG 274 + L+ +A+A+ +GPG+ LD +R WA RP S++ + GI A+W G Sbjct 234 PAVTLAVLLLGIALALQFTGPGKIALDFSRSWARRPRASSWIWFILGIVGAGALWWFGAG 293 Query 275 ANPLA 279 NPLA Sbjct 294 INPLA 298 >gi|172040428|ref|YP_001800142.1| hypothetical protein cur_0748 [Corynebacterium urealyticum DSM 7109] gi|171851732|emb|CAQ04708.1| putative membrane protein [Corynebacterium urealyticum DSM 7109] Length=507 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/174 (39%), Positives = 100/174 (58%), Gaps = 6/174 (3%) Query 107 RRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSA 166 RRGTQ+LGL ILR+ GAVL+ GLQ LFG+ G++ ++ LS + + +LA Sbjct 338 RRGTQSLGLAILRIVAGAVLLISGLQTLFGFAGDPGISALESRLS--FFSVSGVLAVAIP 395 Query 167 GGEIVAGVLLVLGLFTPLAAAGALAFLINGLLAG--ISAQHSRPVAYFLQDGHEYQITLV 224 E++AG LL+LGL TP AAA LAF+++ +A +S Y L + Sbjct 396 AAEVIAGGLLILGLLTPFAAA--LAFVVSAFMATFHLSGHQGSLWPYGLNPVIHQWVLYA 453 Query 225 VMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNGANPL 278 ++++++I +GPG LD +R WA RP S++ + GIA A+W+L G NP Sbjct 454 LISLSLIFTGPGGASLDRSRSWATRPLASSWIFAVLGIAGFAALWLLTGGRNPF 507 >gi|337290559|ref|YP_004629580.1| hypothetical protein CULC22_00948 [Corynebacterium ulcerans BR-AD22] gi|334698865|gb|AEG83661.1| putative membrane protein [Corynebacterium ulcerans BR-AD22] Length=502 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/184 (35%), Positives = 90/184 (49%), Gaps = 9/184 (4%) Query 98 DDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQH 157 D + A +RGT + GLL+LRV GA LI +Q F + G+ G Q+ S Y + Sbjct 324 DTHALAVAAKRGTIDFGLLVLRVVFGAWLILDAVQVFFAMGNSGGINGLQDQFS--SYAY 381 Query 158 AEILAYVSAGGEIVAGVLLVLGLFTPLAAAGAL---AFLINGLLAGISAQHSRPVAYFLQ 214 A LA E+ AGV LV GL TP+AAA A +FL +A + + L Sbjct 382 ASTLAVAVPAMELAAGVFLVFGLLTPVAAAVATVVTSFLTVHHIASAESLN----LLDLN 437 Query 215 DGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVLLNG 274 D + L +++ + +GPG D +R WA RP S+V + GIA +A+W Sbjct 438 DSIWFAFFLTTISLVLQFTGPGLISFDVSRSWAKRPLASSWVFAILGIAGAVALWWFGAA 497 Query 275 ANPL 278 NPL Sbjct 498 VNPL 501 >gi|145295405|ref|YP_001138226.1| hypothetical protein cgR_1343 [Corynebacterium glutamicum R] gi|140845325|dbj|BAF54324.1| hypothetical protein [Corynebacterium glutamicum R] Length=352 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/188 (36%), Positives = 96/188 (52%), Gaps = 16/188 (8%) Query 98 DDERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQH 157 + ++ RRGT + GLLI+R +G LI G+ F GLAG + + GYQ Sbjct 175 EQPQIVEDARRGTLDFGLLIIRAVIGVYLIVRGVFTFFTLGGSAGLAGLEAEFA--GYQW 232 Query 158 AEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQH------SRPVAY 211 EILA + E+ AGV L+LGL TP+AAA A L ++ S P+ Sbjct 233 PEILAILLPSIELAAGVFLLLGLMTPVAAAVATVATSFTTLHQVNTHEGGWGELSEPLML 292 Query 212 FLQDGHEYQITLVVMAVAVILSGPGRYGLDAARGWAHRPFIGSFVALLGGIAAGIAVWVL 271 L L ++ V + +GPG+ LD+ RGWA RP + S++ ++ GIAA + +W Sbjct 293 AL--------ILTIVVVGLQFTGPGKISLDSGRGWAKRPLVSSWIFVVIGIAAAVLLWWF 344 Query 272 LNGANPLA 279 G NP+A Sbjct 345 GAGVNPIA 352 Lambda K H 0.319 0.139 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 439663874064 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40