BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3013
Length=218
Score E
Sequences producing significant alignments: (Bits) Value
gi|167967817|ref|ZP_02550094.1| hypothetical protein MtubH3_0721... 423 7e-117
gi|15842571|ref|NP_337608.1| hypothetical protein MT3093 [Mycoba... 422 1e-116
gi|15610150|ref|NP_217529.1| hypothetical protein Rv3013 [Mycoba... 422 2e-116
gi|240168926|ref|ZP_04747585.1| hypothetical protein MkanA1_0641... 381 5e-104
gi|41409145|ref|NP_961981.1| hypothetical protein MAP3047 [Mycob... 376 1e-102
gi|296171264|ref|ZP_06852668.1| amino acid-binding ACT domain pr... 376 1e-102
gi|342858164|ref|ZP_08714819.1| ACT domain-containing protein [M... 375 2e-102
gi|254818483|ref|ZP_05223484.1| ACT domain-containing protein [M... 373 1e-101
gi|183981713|ref|YP_001850004.1| hypothetical protein MMAR_1700 ... 372 1e-101
gi|118617530|ref|YP_905862.1| hypothetical protein MUL_1937 [Myc... 370 7e-101
gi|2414537|emb|CAB16426.1| hypothetical protein MLCB637.11c [Myc... 357 8e-97
gi|15827910|ref|NP_302173.1| hypothetical protein ML1704 [Mycoba... 357 9e-97
gi|118471598|ref|YP_886706.1| amino acid-binding ACT [Mycobacter... 330 6e-89
gi|145224826|ref|YP_001135504.1| amino acid-binding ACT domain-c... 324 6e-87
gi|120403105|ref|YP_952934.1| amino acid-binding ACT domain-cont... 323 1e-86
gi|108798857|ref|YP_639054.1| amino acid-binding ACT [Mycobacter... 310 6e-83
gi|169630424|ref|YP_001704073.1| hypothetical protein MAB_3343 [... 310 7e-83
gi|333991376|ref|YP_004523990.1| hypothetical protein JDM601_273... 309 2e-82
gi|312140509|ref|YP_004007845.1| amino acid-binding act domain p... 290 1e-76
gi|343926868|ref|ZP_08766361.1| hypothetical protein GOALK_072_0... 287 7e-76
gi|111023432|ref|YP_706404.1| hypothetical protein RHA1_ro06471 ... 283 1e-74
gi|226365933|ref|YP_002783716.1| hypothetical protein ROP_65240 ... 283 1e-74
gi|54026231|ref|YP_120473.1| hypothetical protein nfa42600 [Noca... 283 2e-74
gi|229493381|ref|ZP_04387170.1| amino acid-binding ACT [Rhodococ... 279 2e-73
gi|226305869|ref|YP_002765829.1| hypothetical protein RER_23820 ... 277 9e-73
gi|262203135|ref|YP_003274343.1| amino acid-binding ACT domain-c... 275 3e-72
gi|326381522|ref|ZP_08203216.1| amino acid-binding ACT domain-co... 262 2e-68
gi|333920875|ref|YP_004494456.1| hypothetical protein AS9A_3211 ... 260 1e-67
gi|296140593|ref|YP_003647836.1| amino acid-binding ACT domain-c... 258 3e-67
gi|296393553|ref|YP_003658437.1| amino acid-binding ACT domain-c... 257 9e-67
gi|317506701|ref|ZP_07964486.1| ACT domain-containing protein [S... 253 1e-65
gi|300783593|ref|YP_003763884.1| ACT domain-containing protein [... 222 4e-56
gi|324999191|ref|ZP_08120303.1| ACT domain-containing protein [P... 221 5e-56
gi|302524943|ref|ZP_07277285.1| amino acid-binding ACT [Streptom... 221 7e-56
gi|331695642|ref|YP_004331881.1| amino acid-binding ACT domain-c... 218 5e-55
gi|134102612|ref|YP_001108273.1| amino acid-binding ACT [Sacchar... 213 2e-53
gi|257054927|ref|YP_003132759.1| ACT domain-containing protein [... 211 4e-53
gi|256380029|ref|YP_003103689.1| amino acid-binding ACT domain-c... 206 2e-51
gi|284992467|ref|YP_003411021.1| amino acid-binding ACT domain-c... 194 6e-48
gi|258651691|ref|YP_003200847.1| amino acid-binding ACT domain-c... 189 2e-46
gi|319951545|ref|ZP_08025349.1| amino acid-binding ACT domain pr... 173 2e-41
gi|237785836|ref|YP_002906541.1| hypothetical protein ckrop_1254... 164 6e-39
gi|305682040|ref|ZP_07404844.1| ACT domain protein [Corynebacter... 161 6e-38
gi|311740578|ref|ZP_07714405.1| amino acid-binding ACT domain pr... 160 1e-37
gi|255324553|ref|ZP_05365670.1| amino acid-binding ACT [Coryneba... 158 4e-37
gi|38233672|ref|NP_939439.1| hypothetical protein DIP1078 [Coryn... 158 6e-37
gi|225022721|ref|ZP_03711913.1| hypothetical protein CORMATOL_02... 152 3e-35
gi|145295384|ref|YP_001138205.1| hypothetical protein cgR_1322 [... 152 4e-35
gi|227548042|ref|ZP_03978091.1| amino acid-binding ACT [Coryneba... 152 4e-35
gi|337290542|ref|YP_004629563.1| hypothetical protein CULC22_009... 150 1e-34
>gi|167967817|ref|ZP_02550094.1| hypothetical protein MtubH3_07212 [Mycobacterium tuberculosis
H37Ra]
gi|254365648|ref|ZP_04981693.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|254552093|ref|ZP_05142540.1| hypothetical protein Mtube_16841 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
30 more sequence titles
Length=221
Score = 423 bits (1088), Expect = 7e-117, Method: Compositional matrix adjust.
Identities = 218/218 (100%), Positives = 218/218 (100%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT
Sbjct 4 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 63
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW
Sbjct 64 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 123
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA
Sbjct 124 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 183
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 184 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 221
>gi|15842571|ref|NP_337608.1| hypothetical protein MT3093 [Mycobacterium tuberculosis CDC1551]
gi|148824203|ref|YP_001288957.1| hypothetical protein TBFG_13028 [Mycobacterium tuberculosis F11]
gi|253797892|ref|YP_003030893.1| hypothetical protein TBMG_00957 [Mycobacterium tuberculosis KZN
1435]
12 more sequence titles
Length=240
Score = 422 bits (1086), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 218/218 (100%), Positives = 218/218 (100%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT
Sbjct 23 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 82
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW
Sbjct 83 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 142
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA
Sbjct 143 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 202
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 203 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 240
>gi|15610150|ref|NP_217529.1| hypothetical protein Rv3013 [Mycobacterium tuberculosis H37Rv]
gi|31794190|ref|NP_856683.1| hypothetical protein Mb3038 [Mycobacterium bovis AF2122/97]
gi|121638895|ref|YP_979119.1| hypothetical protein BCG_3035 [Mycobacterium bovis BCG str. Pasteur
1173P2]
32 more sequence titles
Length=218
Score = 422 bits (1085), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 217/218 (99%), Positives = 218/218 (100%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
+RSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT
Sbjct 1 MRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW
Sbjct 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA
Sbjct 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
>gi|240168926|ref|ZP_04747585.1| hypothetical protein MkanA1_06415 [Mycobacterium kansasii ATCC
12478]
Length=221
Score = 381 bits (978), Expect = 5e-104, Method: Compositional matrix adjust.
Identities = 197/218 (91%), Positives = 204/218 (94%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLRIEL DRPGSLGSLAVALGSVGADILSLDVVER GYAIDDLVVE+PPGAMPD
Sbjct 4 VPSYLLRIELEDRPGSLGSLAVALGSVGADILSLDVVERSAGYAIDDLVVEMPPGAMPDR 63
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE+LNGVRVDS+RPHTGLLEAHRELELLDHVAAA ++RLQVLVNEAPRVLRVSW
Sbjct 64 LITAAESLNGVRVDSLRPHTGLLEAHRELELLDHVAAARDNSSRLQVLVNEAPRVLRVSW 123
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVL SS G LHRLAGSPGAPETRA+SAPWLPIERAA LDGGADWVP+AWRDMDTTMVAA
Sbjct 124 CTVLHSSEGALHRLAGSPGAPETRADSAPWLPIERAAPLDGGADWVPRAWRDMDTTMVAA 183
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGD H AVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 184 PLGDPHMAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 221
>gi|41409145|ref|NP_961981.1| hypothetical protein MAP3047 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463139|ref|YP_883024.1| ACT domain-containing protein [Mycobacterium avium 104]
gi|254776282|ref|ZP_05217798.1| ACT domain-containing protein [Mycobacterium avium subsp. avium
ATCC 25291]
gi|41397965|gb|AAS05595.1| hypothetical protein MAP_3047 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118164426|gb|ABK65323.1| ACT domain protein [Mycobacterium avium 104]
gi|336459176|gb|EGO38123.1| hypothetical protein MAPs_06140 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=221
Score = 376 bits (966), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 191/218 (88%), Positives = 204/218 (94%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLRIEL DRPGSLGSLAVALGSVGADILSLDVV+R +GYAIDDLV+ELP GAMPDT
Sbjct 4 VPSYLLRIELLDRPGSLGSLAVALGSVGADILSLDVVDRSSGYAIDDLVIELPAGAMPDT 63
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE+L+GVRVDSVRPHTGLLEAHRELELLDHVAAA+ TARLQVLV+EAP+VLRVSW
Sbjct 64 LITAAESLSGVRVDSVRPHTGLLEAHRELELLDHVAAADDKTARLQVLVDEAPKVLRVSW 123
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVLRS+GGELHRLAGS GAPET+A+SAPWLP+ERA LD DWVP+AWRDMD TMVAA
Sbjct 124 CTVLRSAGGELHRLAGSSGAPETKADSAPWLPLERAMTLDSSGDWVPKAWRDMDMTMVAA 183
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGD HTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 184 PLGDPHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 221
>gi|296171264|ref|ZP_06852668.1| amino acid-binding ACT domain protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894232|gb|EFG73989.1| amino acid-binding ACT domain protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=221
Score = 376 bits (965), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 194/218 (89%), Positives = 202/218 (93%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLRIEL DRPGSLGSLAVALGSVGADILSLDVVER +GYAIDDLV+ELPPGAMPDT
Sbjct 4 VPSYLLRIELVDRPGSLGSLAVALGSVGADILSLDVVERSSGYAIDDLVIELPPGAMPDT 63
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE+L+GVRVDSVRPHTGLLEAHRELELLDHVAAA +RLQVL +EAPRVLRVSW
Sbjct 64 LITAAESLSGVRVDSVRPHTGLLEAHRELELLDHVAAAADRASRLQVLADEAPRVLRVSW 123
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVLRS+ G LHRLA S GAPETRA+SAPWLPIERAAALD DWVPQAWRDMDTTMVAA
Sbjct 124 CTVLRSADGALHRLASSRGAPETRADSAPWLPIERAAALDSTGDWVPQAWRDMDTTMVAA 183
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGD HTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 184 PLGDPHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 221
>gi|342858164|ref|ZP_08714819.1| ACT domain-containing protein [Mycobacterium colombiense CECT
3035]
gi|342133868|gb|EGT87048.1| ACT domain-containing protein [Mycobacterium colombiense CECT
3035]
Length=221
Score = 375 bits (963), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 191/218 (88%), Positives = 202/218 (93%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLRIEL DRPGSLGSLAVALGSVGADILSLDVV+R GYA DDLV+ELPPGAMPDT
Sbjct 4 VPSYLLRIELVDRPGSLGSLAVALGSVGADILSLDVVDRSAGYATDDLVIELPPGAMPDT 63
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE+L+GVRVDSVRPHTGLLEAHRELELLDHVAAA G ARLQVL NEAP+VLRVSW
Sbjct 64 LITAAESLSGVRVDSVRPHTGLLEAHRELELLDHVAAAGGKAARLQVLANEAPKVLRVSW 123
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVLRS+G EL RLA SPGAPET+A+SAPWLP+ERAA LDG A+WVP+AWRDMD TMVAA
Sbjct 124 CTVLRSAGDELQRLAASPGAPETKADSAPWLPLERAATLDGTAEWVPKAWRDMDVTMVAA 183
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGD HTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 184 PLGDPHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 221
>gi|254818483|ref|ZP_05223484.1| ACT domain-containing protein [Mycobacterium intracellulare ATCC
13950]
Length=221
Score = 373 bits (957), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 189/218 (87%), Positives = 202/218 (93%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLRIEL DRPGSLGSLAVALGSVGADILSLDVVER +GYAIDDLV+ELPPGAMPD+
Sbjct 4 VPSYLLRIELVDRPGSLGSLAVALGSVGADILSLDVVERSSGYAIDDLVIELPPGAMPDS 63
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE+L+GVRVDSVRPHTGLLEAHRELELLDH+AAA +RLQVL NEAPRVLRVSW
Sbjct 64 LITAAESLSGVRVDSVRPHTGLLEAHRELELLDHIAAAGDTASRLQVLANEAPRVLRVSW 123
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVLRS+GGEL RLAGS GAPET+A++APWLP+ERA LD ADWVP+AWRDMD TMVAA
Sbjct 124 CTVLRSAGGELQRLAGSRGAPETKADTAPWLPLERAVPLDSSADWVPKAWRDMDMTMVAA 183
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGD HTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 184 PLGDPHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 221
>gi|183981713|ref|YP_001850004.1| hypothetical protein MMAR_1700 [Mycobacterium marinum M]
gi|183175039|gb|ACC40149.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=230
Score = 372 bits (956), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 193/218 (89%), Positives = 198/218 (91%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLRIEL DRPGSLGSLAVALGSVGADILSLDVVERG GYAIDDLVVEL PGAMPD
Sbjct 13 VPSYLLRIELLDRPGSLGSLAVALGSVGADILSLDVVERGCGYAIDDLVVELAPGAMPDA 72
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE+LNGVRVDSVRPHTGLLEAHRELELLDHVA A T+RLQVL NEAPRVLRVSW
Sbjct 73 LITAAESLNGVRVDSVRPHTGLLEAHRELELLDHVATARDNTSRLQVLANEAPRVLRVSW 132
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVLRS GEL RLAGSPGAPETRA SAPWLPIE+A LDG A+WVP+ WRDMDT MVAA
Sbjct 133 CTVLRSVEGELQRLAGSPGAPETRAASAPWLPIEQAKPLDGSAEWVPKVWRDMDTRMVAA 192
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGD HTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 193 PLGDQHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 230
>gi|118617530|ref|YP_905862.1| hypothetical protein MUL_1937 [Mycobacterium ulcerans Agy99]
gi|118569640|gb|ABL04391.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=220
Score = 370 bits (950), Expect = 7e-101, Method: Compositional matrix adjust.
Identities = 192/218 (89%), Positives = 197/218 (91%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLRIEL DRPGSLGSLAVALGSV ADILSLDVVERG GYAIDDLVVEL PGAMPD
Sbjct 3 VPSYLLRIELLDRPGSLGSLAVALGSVDADILSLDVVERGCGYAIDDLVVELAPGAMPDA 62
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE+LNGVRVDSVRPHTGLLEAHRELELLDHVA A T+RLQVL NEAPRVLRVSW
Sbjct 63 LITAAESLNGVRVDSVRPHTGLLEAHRELELLDHVATARDNTSRLQVLANEAPRVLRVSW 122
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVLRS GEL RLAGSPGAPETRA SAPWLPIE+A LDG A+WVP+ WRDMDT MVAA
Sbjct 123 CTVLRSVEGELQRLAGSPGAPETRAASAPWLPIEQAKPLDGSAEWVPKVWRDMDTRMVAA 182
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGD HTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 183 PLGDQHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 220
>gi|2414537|emb|CAB16426.1| hypothetical protein MLCB637.11c [Mycobacterium leprae]
Length=230
Score = 357 bits (915), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 183/218 (84%), Positives = 197/218 (91%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLRIELADRPGSLGSLAVALGSVG DILSLDVVER GYAIDDLV+E+P GAMPD
Sbjct 13 VPSYLLRIELADRPGSLGSLAVALGSVGGDILSLDVVERSGGYAIDDLVIEVPSGAMPDK 72
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITA E+L GVRVDSVRPH+GLLEAHRELELLD VAAA+ ++LQVL +EAP+VLRVSW
Sbjct 73 LITAFESLPGVRVDSVRPHSGLLEAHRELELLDQVAAADDNASKLQVLADEAPKVLRVSW 132
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVLRSS G+L RLA S GAPETRANSAPWLPIERAA LDG A+WVPQ+ RDM+TTM+AA
Sbjct 133 CTVLRSSQGKLLRLAASVGAPETRANSAPWLPIERAAPLDGTAEWVPQSLRDMNTTMIAA 192
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGD HTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 193 PLGDPHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 230
>gi|15827910|ref|NP_302173.1| hypothetical protein ML1704 [Mycobacterium leprae TN]
gi|221230387|ref|YP_002503803.1| hypothetical protein MLBr_01704 [Mycobacterium leprae Br4923]
gi|13093463|emb|CAC30657.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933494|emb|CAR71799.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=232
Score = 357 bits (915), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 183/218 (84%), Positives = 197/218 (91%), Gaps = 0/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLRIELADRPGSLGSLAVALGSVG DILSLDVVER GYAIDDLV+E+P GAMPD
Sbjct 15 VPSYLLRIELADRPGSLGSLAVALGSVGGDILSLDVVERSGGYAIDDLVIEVPSGAMPDK 74
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITA E+L GVRVDSVRPH+GLLEAHRELELLD VAAA+ ++LQVL +EAP+VLRVSW
Sbjct 75 LITAFESLPGVRVDSVRPHSGLLEAHRELELLDQVAAADDNASKLQVLADEAPKVLRVSW 134
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTVLRSS G+L RLA S GAPETRANSAPWLPIERAA LDG A+WVPQ+ RDM+TTM+AA
Sbjct 135 CTVLRSSQGKLLRLAASVGAPETRANSAPWLPIERAAPLDGTAEWVPQSLRDMNTTMIAA 194
Query 181 PLGDTHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 218
PLGD HTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
Sbjct 195 PLGDPHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR 232
>gi|118471598|ref|YP_886706.1| amino acid-binding ACT [Mycobacterium smegmatis str. MC2 155]
gi|118172885|gb|ABK73781.1| amino acid-binding ACT [Mycobacterium smegmatis str. MC2 155]
Length=219
Score = 330 bits (847), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 171/217 (79%), Positives = 188/217 (87%), Gaps = 1/217 (0%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR++L DRPGSLGSLAVALGSVGADILSLDVVERG GYAIDDLVVELP G+MPDTLI
Sbjct 3 SYLLRVQLEDRPGSLGSLAVALGSVGADILSLDVVERGPGYAIDDLVVELPAGSMPDTLI 62
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE LNGV VDS+RPHTGLLEAHRELEL+DH+AAA +LQVL +EAPRVLRV WCT
Sbjct 63 TAAENLNGVFVDSIRPHTGLLEAHRELELIDHIAAAPTKADKLQVLASEAPRVLRVGWCT 122
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
V+RS+G RLA S GAPET+A +APWLP++ A ALD ADWVPQ WRDM TT+ AAPL
Sbjct 123 VVRSAGDSAERLAASHGAPETQAATAPWLPLQHAEALDETADWVPQVWRDMATTLAAAPL 182
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
GD TAVVLGRP GP+FRPSEVARLGYLAGIVAT+LR
Sbjct 183 GDHSTAVVLGRPGGPKFRPSEVARLGYLAGIVATILR 219
>gi|145224826|ref|YP_001135504.1| amino acid-binding ACT domain-containing protein [Mycobacterium
gilvum PYR-GCK]
gi|315445157|ref|YP_004078036.1| ACT domain-containing protein [Mycobacterium sp. Spyr1]
gi|145217312|gb|ABP46716.1| amino acid-binding ACT domain protein [Mycobacterium gilvum PYR-GCK]
gi|315263460|gb|ADU00202.1| ACT domain-containing protein [Mycobacterium sp. Spyr1]
Length=222
Score = 324 bits (830), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 168/218 (78%), Positives = 182/218 (84%), Gaps = 1/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLR+EL DRPGSLGSLAVALGSVGADILSLDVVER GYAIDDLVVELPPGAMPD
Sbjct 4 VPSYLLRVELEDRPGSLGSLAVALGSVGADILSLDVVERAAGYAIDDLVVELPPGAMPDM 63
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE LNGV VDS+RPHTGLL+AHRELEL+DHVAAA+G RLQVLV+EAP+VLRV W
Sbjct 64 LITAAENLNGVYVDSIRPHTGLLDAHRELELIDHVAAADGKLQRLQVLVDEAPKVLRVGW 123
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTV+ + RL GS GAPET+A PWLP+ RA ALD A WVPQ WRDMDTT+ AA
Sbjct 124 CTVVTLTDSGPQRLVGSSGAPETQAAETPWLPLARAEALDASAQWVPQVWRDMDTTLAAA 183
Query 181 PLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
PL D TAVVLGRP GP FRPSEVARLGYLAGIV T++
Sbjct 184 PLSDPSTAVVLGRPGGPAFRPSEVARLGYLAGIVTTII 221
>gi|120403105|ref|YP_952934.1| amino acid-binding ACT domain-containing protein [Mycobacterium
vanbaalenii PYR-1]
gi|119955923|gb|ABM12928.1| amino acid-binding ACT domain protein [Mycobacterium vanbaalenii
PYR-1]
Length=222
Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/218 (78%), Positives = 184/218 (85%), Gaps = 1/218 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLR++L DRPGSLGSLAVALGSVGADILSLDVVER GYAIDDLVVELPPGAMPD
Sbjct 4 VPSYLLRVQLEDRPGSLGSLAVALGSVGADILSLDVVERVAGYAIDDLVVELPPGAMPDM 63
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE LNGV VDS+RPHTGLLEAHRELEL+DHVAAA+G RLQVLV+EAPRVLRV W
Sbjct 64 LITAAENLNGVYVDSIRPHTGLLEAHRELELIDHVAAADGRLKRLQVLVDEAPRVLRVGW 123
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTV+ + R+ GS GAPET+A PWLP+ERA ALD ADWVPQ WRDMDTT+ AA
Sbjct 124 CTVVELTTTGPERVVGSSGAPETQAAETPWLPLERAEALDATADWVPQVWRDMDTTLAAA 183
Query 181 PLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
PLG TA+VLGRP GP FRPSEVARLGYLAGIV T++
Sbjct 184 PLGHPGTAIVLGRPGGPAFRPSEVARLGYLAGIVTTII 221
>gi|108798857|ref|YP_639054.1| amino acid-binding ACT [Mycobacterium sp. MCS]
gi|119867972|ref|YP_937924.1| amino acid-binding ACT domain-containing protein [Mycobacterium
sp. KMS]
gi|126434457|ref|YP_001070148.1| amino acid-binding ACT domain-containing protein [Mycobacterium
sp. JLS]
gi|108769276|gb|ABG07998.1| amino acid-binding ACT [Mycobacterium sp. MCS]
gi|119694061|gb|ABL91134.1| amino acid-binding ACT domain protein [Mycobacterium sp. KMS]
gi|126234257|gb|ABN97657.1| amino acid-binding ACT domain protein [Mycobacterium sp. JLS]
Length=222
Score = 310 bits (795), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 165/219 (76%), Positives = 185/219 (85%), Gaps = 1/219 (0%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLR+++ DRPG LG+LAVALGSVGADILSLDVVER GYAIDDLVV+LP G MPD
Sbjct 4 VPSYLLRVQVEDRPGRLGALAVALGSVGADILSLDVVERVAGYAIDDLVVDLPAGTMPDR 63
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE+L GV VD++RPHTGLLEAHRELEL+DH+AAA+G A+LQ LV+EAPRVLRV W
Sbjct 64 LITAAESLTGVYVDTIRPHTGLLEAHRELELIDHIAAAKGKAAKLQTLVDEAPRVLRVGW 123
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
CTV++ G L R+ GS GAPET+A SAPWLP+ A ALD ADWVPQ WRDMDTT+ AA
Sbjct 124 CTVVQDDGSGLQRVVGSHGAPETQAQSAPWLPLAHAEALDASADWVPQLWRDMDTTLAAA 183
Query 181 PLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
PLGD TAVVLGRP GP FRPSEVARLGYLAGIV T+LR
Sbjct 184 PLGDAGTAVVLGRPGGPAFRPSEVARLGYLAGIVNTILR 222
>gi|169630424|ref|YP_001704073.1| hypothetical protein MAB_3343 [Mycobacterium abscessus ATCC 19977]
gi|169242391|emb|CAM63419.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=218
Score = 310 bits (795), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 165/217 (77%), Positives = 188/217 (87%), Gaps = 2/217 (0%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR++LADRPGSLGS+AVALG+VGADILSLDVVERG GYAIDDLV++LPPG+MPD+LI
Sbjct 3 SYLLRLQLADRPGSLGSVAVALGTVGADILSLDVVERGPGYAIDDLVIDLPPGSMPDSLI 62
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAEALNGV V S+RPHTGLLEAHRELEL+D VAAA A+ARL+VL EAP VLR +WCT
Sbjct 63 TAAEALNGVHVHSIRPHTGLLEAHRELELIDRVAAAA-ASARLEVLAQEAPHVLRANWCT 121
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
V+R G R+AGS GAPET+A SAPWLP+ RA L+ A+WVPQ W+DMDTT+ AAPL
Sbjct 122 VVRQDGTGFIRVAGSAGAPETQATSAPWLPLSRAQVLETTAEWVPQLWKDMDTTLAAAPL 181
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
G TAVVLGRP GPEFRPSEVARLGYLAGIVAT++R
Sbjct 182 GSGDTAVVLGRPGGPEFRPSEVARLGYLAGIVATLVR 218
>gi|333991376|ref|YP_004523990.1| hypothetical protein JDM601_2736 [Mycobacterium sp. JDM601]
gi|333487344|gb|AEF36736.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=230
Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/221 (75%), Positives = 179/221 (81%), Gaps = 3/221 (1%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLR+EL DRPGSLGSLAVALGSVGADILSLDV+ERG+G AIDDLVVELPPGAMPD
Sbjct 10 VSSYLLRVELDDRPGSLGSLAVALGSVGADILSLDVIERGSGSAIDDLVVELPPGAMPDV 69
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE L G+RV SVRPHTGLLEAHRELEL+D VA A A+LQ L + APRVLRVSW
Sbjct 70 LITAAERLEGIRVHSVRPHTGLLEAHRELELIDRVAVAGDRQAKLQKLADAAPRVLRVSW 129
Query 121 CTVLRSSGGE--LHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMV 178
C VLR G RLAGSPG PET + PWLP+ERAA LD ADWVP WR+MDT ++
Sbjct 130 CAVLRGDGSAAGFRRLAGSPGTPETEVGAVPWLPLERAAVLDNTADWVPAVWREMDTALL 189
Query 179 AAPLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
AAPLGD TA+VLGR GP F P+EVARLGYLAGIVAT+LR
Sbjct 190 AAPLGDPQTAIVLGRTGGPPFLPAEVARLGYLAGIVATLLR 230
>gi|312140509|ref|YP_004007845.1| amino acid-binding act domain protein [Rhodococcus equi 103S]
gi|325675872|ref|ZP_08155556.1| amino acid-binding ACT domain protein [Rhodococcus equi ATCC
33707]
gi|311889848|emb|CBH49165.1| putative amino acid-binding ACT domain protein [Rhodococcus equi
103S]
gi|325553843|gb|EGD23521.1| amino acid-binding ACT domain protein [Rhodococcus equi ATCC
33707]
Length=216
Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/216 (70%), Positives = 179/216 (83%), Gaps = 3/216 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR++L DRPGSLG+LAVALGSVGADILSLDVVERG+G+A+DDLVV++ G++PDTLI
Sbjct 2 SYLLRVQLPDRPGSLGALAVALGSVGADILSLDVVERGSGFAVDDLVVDVASGSLPDTLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE L VRVDS+RP+ G+L+ HRELEL+D+VAAA + RLQVLV+ APRVLRV W T
Sbjct 62 TAAEHLPDVRVDSIRPYAGILDTHRELELIDNVAAAH--SDRLQVLVDGAPRVLRVGWST 119
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
V+ R+ GSPGAPET A APW+P+ +A LDG ADWVPQ+WRDMDTT+ AAPL
Sbjct 120 VMDLGPHGAFRVVGSPGAPETHAGDAPWMPLAKATVLDGQADWVPQSWRDMDTTLAAAPL 179
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
G + +VLGRP GPEFRPSEVARLGYLAGIVAT+L
Sbjct 180 GTSGKVLVLGRPGGPEFRPSEVARLGYLAGIVATVL 215
>gi|343926868|ref|ZP_08766361.1| hypothetical protein GOALK_072_00900 [Gordonia alkanivorans NBRC
16433]
gi|343763228|dbj|GAA13287.1| hypothetical protein GOALK_072_00900 [Gordonia alkanivorans NBRC
16433]
Length=223
Score = 287 bits (735), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 148/217 (69%), Positives = 176/217 (82%), Gaps = 2/217 (0%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR+ L DRPGSLG LAV LGSVGADILSL+VVERGNGYA+DDLVVE+PPG++PD+LI
Sbjct 5 SYLLRVYLEDRPGSLGVLAVQLGSVGADILSLEVVERGNGYAVDDLVVEVPPGSLPDSLI 64
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE +NGVRVDS+RP++G+L+ HRELEL+D VA A+ RLQVLV+ APRVLRVSW
Sbjct 65 TAAEKVNGVRVDSIRPYSGVLDTHRELELVDQVATAK-RNDRLQVLVDNAPRVLRVSWAM 123
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
V+ + G + +L GS GAPET A WLP+E AA LD DWVP AW+DMDT + AAP+
Sbjct 124 VITKASGGVLQLFGSSGAPETPLTRADWLPLEHAAQLDAEGDWVPDAWQDMDTRLAAAPI 183
Query 183 GDTHTAVVLGR-PGPEFRPSEVARLGYLAGIVATMLR 218
G AV+LGR GP+FRPSEVARLGYLAGIV+T+LR
Sbjct 184 GSNDKAVLLGRIGGPDFRPSEVARLGYLAGIVSTVLR 220
>gi|111023432|ref|YP_706404.1| hypothetical protein RHA1_ro06471 [Rhodococcus jostii RHA1]
gi|110822962|gb|ABG98246.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=236
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/216 (69%), Positives = 173/216 (81%), Gaps = 3/216 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR++L DRPGSLGSLAVALGSVGADILSLDVVERG G+AIDDLVV++ PG++PDTLI
Sbjct 22 SYLLRVQLPDRPGSLGSLAVALGSVGADILSLDVVERGAGFAIDDLVVDVEPGSLPDTLI 81
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE L GV VDS+RP+ G+L+ HRELEL+D VA A A RLQVLV+ APRVLRV W
Sbjct 82 TAAENLPGVTVDSIRPYAGILDTHRELELIDQVATA--ADDRLQVLVDGAPRVLRVGWSV 139
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
V +R+ GS GAPET A PW+P+E+ ALDG DWVPQ WRDM+TT+ AAPL
Sbjct 140 VADLGPHGAYRVVGSSGAPETHATEIPWMPLEKPTALDGEGDWVPQVWRDMNTTLAAAPL 199
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
G T ++LGRP GPEFRPSE+ARLGYLAGI+AT+L
Sbjct 200 GTTGRVLMLGRPGGPEFRPSEIARLGYLAGIIATVL 235
>gi|226365933|ref|YP_002783716.1| hypothetical protein ROP_65240 [Rhodococcus opacus B4]
gi|226244423|dbj|BAH54771.1| hypothetical protein [Rhodococcus opacus B4]
Length=236
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/216 (69%), Positives = 173/216 (81%), Gaps = 3/216 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR++L DRPGSLGSLAVALGSVGADILSLDVVERG G+AIDDLVV++ PG++PDTLI
Sbjct 22 SYLLRVQLPDRPGSLGSLAVALGSVGADILSLDVVERGAGFAIDDLVVDVEPGSLPDTLI 81
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE L GV VDS+RP+ G+L+ HRELEL+D VA A A RLQVLV+ APRVLRV W
Sbjct 82 TAAENLPGVSVDSIRPYAGILDTHRELELIDQVATA--ADDRLQVLVDGAPRVLRVGWSV 139
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
V +R+ GS GAPET A PW+P+E+ ALDG DWVPQ WRDM+TT+ AAPL
Sbjct 140 VADLGPHGAYRVVGSSGAPETHATEIPWMPLEKPTALDGEGDWVPQVWRDMNTTLAAAPL 199
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
G T ++LGRP GPEFRPSE+ARLGYLAGI+AT+L
Sbjct 200 GTTGRVLMLGRPGGPEFRPSEIARLGYLAGIIATVL 235
>gi|54026231|ref|YP_120473.1| hypothetical protein nfa42600 [Nocardia farcinica IFM 10152]
gi|54017739|dbj|BAD59109.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=218
Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/216 (68%), Positives = 177/216 (82%), Gaps = 3/216 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR++L DRPGSLG+LA+ALGSVGADILSLDVVERG G+A+DDLVVE+PP A+PDTLI
Sbjct 4 SYLLRVQLPDRPGSLGALALALGSVGADILSLDVVERGAGFAVDDLVVEVPPNALPDTLI 63
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE++ V VDS+RP++G+L+ HRELEL+D VA+A RLQVLV+ PRVLRV W T
Sbjct 64 TAAESIGDVHVDSIRPYSGVLDTHRELELIDQVASAR--DDRLQVLVDGVPRVLRVGWST 121
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
VL +R+ GS AP+T+A SAPW+P+E+ + LD ADWVPQ WRDMDT + AAPL
Sbjct 122 VLDHGPQGAYRVVGSQSAPQTQAASAPWMPLEKPSVLDPEADWVPQIWRDMDTKLAAAPL 181
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
G+T ++LGRP GP+FRPSEVARLGYLAGIVAT+L
Sbjct 182 GNTGKVLMLGRPGGPDFRPSEVARLGYLAGIVATVL 217
>gi|229493381|ref|ZP_04387170.1| amino acid-binding ACT [Rhodococcus erythropolis SK121]
gi|229319697|gb|EEN85529.1| amino acid-binding ACT [Rhodococcus erythropolis SK121]
Length=216
Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/216 (68%), Positives = 173/216 (81%), Gaps = 3/216 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR++L DRPGSLG+LAVALGSVGADILSLDVVERG+G+AIDDLVV++ PGA+PDTLI
Sbjct 2 SYLLRVQLPDRPGSLGALAVALGSVGADILSLDVVERGDGFAIDDLVVDVEPGALPDTLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE L V VDS+RP+ G+L+ HRELEL+D VA A RLQVLV+ APRVLRV WC
Sbjct 62 TAAEHLPDVLVDSIRPYAGILDTHRELELIDSVATAR--NDRLQVLVDGAPRVLRVGWCV 119
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
V +R+ GS GAPET A PW+P+++ ALDG ADWVP WRDM+T++ AAPL
Sbjct 120 VADIGKHGAYRVVGSAGAPETHATDIPWMPLDKPTALDGEADWVPDVWRDMNTSLAAAPL 179
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
G + ++LGRP GPEFRPSE+ARLGYLAGIVAT+L
Sbjct 180 GSGNRVLMLGRPGGPEFRPSEIARLGYLAGIVATVL 215
>gi|226305869|ref|YP_002765829.1| hypothetical protein RER_23820 [Rhodococcus erythropolis PR4]
gi|226184986|dbj|BAH33090.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=242
Score = 277 bits (708), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 144/216 (67%), Positives = 173/216 (81%), Gaps = 3/216 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR++L DRPGSLG+LAVALGSVGADILSLDVVERG+G+AIDDLVV++ PGA+PDTLI
Sbjct 28 SYLLRVQLPDRPGSLGALAVALGSVGADILSLDVVERGDGFAIDDLVVDVEPGALPDTLI 87
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE L V VDS+RP+ G+L+ HRELEL+D VA A RLQVLV+ APRVLRV WC
Sbjct 88 TAAEHLPDVLVDSIRPYAGILDTHRELELIDSVATAR--NDRLQVLVDGAPRVLRVGWCV 145
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
V +R+ GS GAPET A PW+P+++ ALDG ADWVP WR+M+T++ AAPL
Sbjct 146 VADIGKHGAYRVVGSAGAPETHATDIPWMPLDKPTALDGEADWVPDVWREMNTSLAAAPL 205
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
G + ++LGRP GPEFRPSE+ARLGYLAGIVAT+L
Sbjct 206 GSGNRVLMLGRPGGPEFRPSEIARLGYLAGIVATVL 241
>gi|262203135|ref|YP_003274343.1| amino acid-binding ACT domain-containing protein [Gordonia bronchialis
DSM 43247]
gi|262086482|gb|ACY22450.1| amino acid-binding ACT domain protein [Gordonia bronchialis DSM
43247]
Length=221
Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/217 (67%), Positives = 170/217 (79%), Gaps = 3/217 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR+ L DRPGSLG LAV LGSVGADILSL+VVERG+GYA+DDLVV++ PGA+PD+LI
Sbjct 5 SYLLRVYLQDRPGSLGLLAVQLGSVGADILSLEVVERGDGYAVDDLVVDVAPGALPDSLI 64
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE + GVRVDS+RP+ G+L+ HRELEL+D VA G T RLQ+LV+ APRVLRVSW
Sbjct 65 TAAEKVKGVRVDSIRPYAGVLDTHRELELVDRVAT--GDTDRLQILVDNAPRVLRVSWAM 122
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
VL G + RL GS GAPET A WLP+E A LD DWVP AWR+ DT M AAPL
Sbjct 123 VLTRGGSGVLRLFGSSGAPETPLTRADWLPVEHATQLDPDGDWVPDAWREADTRMAAAPL 182
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
G A++LGR GP+FRPSE+ARLGYLAGIV+T+LR
Sbjct 183 GSGTKAILLGRAGGPDFRPSEIARLGYLAGIVSTVLR 219
>gi|326381522|ref|ZP_08203216.1| amino acid-binding ACT domain-containing protein [Gordonia neofelifaecis
NRRL B-59395]
gi|326199769|gb|EGD56949.1| amino acid-binding ACT domain-containing protein [Gordonia neofelifaecis
NRRL B-59395]
Length=236
Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/215 (63%), Positives = 169/215 (79%), Gaps = 3/215 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR+ L DRPGSLG LAV LG+VGADI SL+V+ERG GYA+DDLVV+LP GA+PDTLI
Sbjct 2 SYLLRVLLNDRPGSLGMLAVQLGAVGADIRSLEVIERGEGYAVDDLVVDLPAGALPDTLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE + GV VDS+RPH G+L+ H+ELEL+D VAA G RLQ+L + APRVLRVSW T
Sbjct 62 TAAEKVAGVHVDSLRPHAGVLDTHQELELIDLVAA--GGDDRLQILADYAPRVLRVSWAT 119
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
++ G ++ RL S GAPE+ +A WLP++ A D ADW+P++WR+MDT++ AAPL
Sbjct 120 IVSRPGSDVLRLYASSGAPESPLQTADWLPLDGPVAFDSDADWLPESWREMDTSVAAAPL 179
Query 183 GDTHTAVVLGR-PGPEFRPSEVARLGYLAGIVATM 216
GD A++LGR GPEFRP+EVARLGYLAGI+ T+
Sbjct 180 GDGGKALLLGRIGGPEFRPAEVARLGYLAGIIGTL 214
>gi|333920875|ref|YP_004494456.1| hypothetical protein AS9A_3211 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483096|gb|AEF41656.1| hypothetical protein AS9A_3211 [Amycolicicoccus subflavus DQS3-9A1]
Length=216
Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/216 (63%), Positives = 168/216 (78%), Gaps = 3/216 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR++L DRPGSLG+LA+ALGSVGADI+SLDVVER + YA+DDLVVE+ PG++PDTLI
Sbjct 2 SYLLRVQLPDRPGSLGALALALGSVGADIISLDVVERYSDYAVDDLVVEMAPGSLPDTLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE L GV VDS+RP+ +L+ HRELEL+D VA A ++ R+QVLV+ AP VLRV W
Sbjct 62 TAAERLEGVSVDSIRPYADMLDTHRELELIDQVAMA--SSDRIQVLVDGAPSVLRVGWAA 119
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
V+ + +A S GAPETR PW+P+++ LD A+WVP W+DM T++VAAPL
Sbjct 120 VVAEGPHGTYLVATSSGAPETRPKELPWMPLKKPLMLDQEAEWVPGPWKDMATSLVAAPL 179
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
G A+VLGRP GP+FRPSEVARLGYLAGI+ T+L
Sbjct 180 GQKEMALVLGRPGGPDFRPSEVARLGYLAGIIGTIL 215
>gi|296140593|ref|YP_003647836.1| amino acid-binding ACT domain-containing protein [Tsukamurella
paurometabola DSM 20162]
gi|296028727|gb|ADG79497.1| amino acid-binding ACT domain protein [Tsukamurella paurometabola
DSM 20162]
Length=217
Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/216 (64%), Positives = 167/216 (78%), Gaps = 3/216 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR+ L DRPGSLGSLAVALGSVGADILSLDVVERG+GYA+DDLVV+L P ++PDTLI
Sbjct 2 SYLLRVRLTDRPGSLGSLAVALGSVGADILSLDVVERGDGYAVDDLVVDLGPQSLPDTLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAEAL G+ VDS+RP++ +L+ HRELEL+DHVA A +LQ+LV++ PRVLRV WC
Sbjct 62 TAAEALEGITVDSIRPYSDVLDTHRELELIDHVAGA--GHDQLQMLVDQVPRVLRVGWCA 119
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
VL ++ GS G PET S +LP+ ALD ADWVP+AW+ +DT + APL
Sbjct 120 VLSNTPDAAWPAFGSSGLPETPPTSLDFLPLGGPVALDPEADWVPEAWQQLDTKLAGAPL 179
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
G V++GRP GP+FRPSEVARLGYLAGIVAT+L
Sbjct 180 GAIGKVVLVGRPGGPDFRPSEVARLGYLAGIVATVL 215
>gi|296393553|ref|YP_003658437.1| amino acid-binding ACT domain-containing protein [Segniliparus
rotundus DSM 44985]
gi|296180700|gb|ADG97606.1| amino acid-binding ACT domain protein [Segniliparus rotundus
DSM 44985]
Length=216
Score = 257 bits (656), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 131/216 (61%), Positives = 164/216 (76%), Gaps = 3/216 (1%)
Query 4 YLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLIT 63
YL+R+EL DRPGSLG+LAVALG+VGADI+SL+VVERG GYA+DD+VV+LP +PD+LIT
Sbjct 3 YLIRVELEDRPGSLGALAVALGTVGADIVSLEVVERGTGYAVDDIVVDLPTDRLPDSLIT 62
Query 64 AAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCTV 123
AAE + GVRVD++RP+TGLL+ HREL L+D VA ++ RLQ+L +EAPRVL WC +
Sbjct 63 AAEQIRGVRVDAIRPYTGLLDTHRELTLIDQVATSQ--ENRLQILADEAPRVLHAGWCVI 120
Query 124 LRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPLG 183
S L + S GAPE P L +E A ALDG ADWVPQ WRD+DT + AAPLG
Sbjct 121 AVSGANGLEPINSSSGAPEPGGYQIPVLGLEGARALDGEADWVPQVWRDLDTALAAAPLG 180
Query 184 DTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
+ ++LGRP GP FRP+EVARLGY+ GI+AT+LR
Sbjct 181 EKDLVIILGRPGGPGFRPAEVARLGYVTGILATVLR 216
>gi|317506701|ref|ZP_07964486.1| ACT domain-containing protein [Segniliparus rugosus ATCC BAA-974]
gi|316255000|gb|EFV14285.1| ACT domain-containing protein [Segniliparus rugosus ATCC BAA-974]
Length=216
Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/217 (60%), Positives = 165/217 (77%), Gaps = 3/217 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR+EL DRPGSLG+LAVALG+VGADI+SL+VVERG GYA+DD+VV+LP +PD+LI
Sbjct 2 SYLLRVELEDRPGSLGALAVALGTVGADIVSLEVVERGPGYAVDDIVVDLPSDRLPDSLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE + GV+VD++RP+TG+L+ HREL L+D VAA+ RLQ+L +EAPRVL WC
Sbjct 62 TAAEQIRGVKVDAIRPYTGVLDTHRELALIDQVAAS--PENRLQILADEAPRVLHSGWCV 119
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
+ S + S GAPE + P L ++ A LDG ADWVPQ W+D+DT + AAPL
Sbjct 120 IAVSGANGAEPINSSSGAPEPGSYQIPVLGLDGARCLDGQADWVPQVWQDLDTALAAAPL 179
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
G+ ++LGRP GPEFRP+EVARLGY+ GI+AT+LR
Sbjct 180 GEKDLVIILGRPGGPEFRPAEVARLGYVTGILATVLR 216
>gi|300783593|ref|YP_003763884.1| ACT domain-containing protein [Amycolatopsis mediterranei U32]
gi|299793107|gb|ADJ43482.1| ACT domain-containing protein [Amycolatopsis mediterranei U32]
gi|340524983|gb|AEK40188.1| ACT domain-containing protein [Amycolatopsis mediterranei S699]
Length=218
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/216 (53%), Positives = 153/216 (71%), Gaps = 3/216 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
S+L+R+ L D PG+LG++A ALG+VGADILS+DVVERG+G A+DDLVVELP G +PD LI
Sbjct 3 SFLIRVLLPDSPGTLGAVATALGTVGADILSVDVVERGSGVAVDDLVVELPSGRLPDALI 62
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE++ GV VD+VRP+ G+L+ HRELEL++ +AA + L +L PR++R W
Sbjct 63 TAAESVEGVEVDAVRPYAGVLDTHRELELVEEIAAQ--PKSGLDILAEGVPRIVRAGWAM 120
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
++ S RLA S APET PWLP+ERA LD DW+P+ W+++ T + A PL
Sbjct 121 IVEYSETGAVRLASSSAAPETPITDLPWLPLERATVLDSEEDWIPETWKELGTELAATPL 180
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
G A+++ RP GP FR +EVARL +LAGIVA +L
Sbjct 181 GKPGKALLVARPGGPNFRAAEVARLAHLAGIVAVVL 216
>gi|324999191|ref|ZP_08120303.1| ACT domain-containing protein [Pseudonocardia sp. P1]
Length=218
Score = 221 bits (563), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/219 (58%), Positives = 153/219 (70%), Gaps = 6/219 (2%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
S+LLR+ L D+PG+LG++A ALG GADILS+DVVERG+G AIDD+ VEL PD LI
Sbjct 2 SFLLRVILPDKPGNLGAVASALGGAGADILSVDVVERGDGQAIDDIAVELSTHRPPDVLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE++ GV V+SVRPHTG L+ HRELELLD +A G L +L E PR+ R W
Sbjct 62 TAAESVPGVTVESVRPHTGQLDTHRELELLDEIAGDPGHG--LDLLAAEVPRLFRAGWAL 119
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
V S G +R+A S APETR PWLP++RA ALD G WVP+ WR MDT + AAP
Sbjct 120 VAVSEHGRSYRIAESSAAPETRTGDLPWLPLDRAIALDDG-HWVPEPWRAMDTELAAAPF 178
Query 183 GD--THTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
G +V+GRP GP FRPSE+ARL +LAGIVAT+L+
Sbjct 179 GTGVPPKTLVVGRPGGPVFRPSELARLAHLAGIVATVLK 217
>gi|302524943|ref|ZP_07277285.1| amino acid-binding ACT [Streptomyces sp. AA4]
gi|302433838|gb|EFL05654.1| amino acid-binding ACT [Streptomyces sp. AA4]
Length=227
Score = 221 bits (562), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/218 (53%), Positives = 152/218 (70%), Gaps = 3/218 (1%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V S+L+R++L D PG+LG++A ALG+VGADILS+DVVERG G AIDDLVVELP G +PD
Sbjct 10 VVSFLIRVQLPDSPGTLGAVATALGTVGADILSVDVVERGGGLAIDDLVVELPSGRLPDA 69
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE++ GV VD+VRP+ G+L+ HRELEL++ +AA A L +L P+++R W
Sbjct 70 LITAAESVEGVEVDAVRPYAGILDTHRELELVEEIAAQ--PKAGLDLLAEGVPKIIRAGW 127
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAA 180
++ + RLA S APE PWLP+ERA LDG WVP+ W+++ T + A
Sbjct 128 AVIVEHAESGPRRLASSSAAPENPFTDLPWLPLERATVLDGEDSWVPETWKELGTELAAT 187
Query 181 PLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
PLG A+++ RP GP FR +EVARL + AGIVA +L
Sbjct 188 PLGKPGKAMLVARPGGPNFRAAEVARLAHFAGIVAVVL 225
>gi|331695642|ref|YP_004331881.1| amino acid-binding ACT domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
gi|326950331|gb|AEA24028.1| amino acid-binding ACT domain protein [Pseudonocardia dioxanivorans
CB1190]
Length=219
Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/219 (56%), Positives = 151/219 (69%), Gaps = 7/219 (3%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
++LLR+ L DRPGSLG++A ALG GADIL +DVVER +G A+DDL VELP G PD LI
Sbjct 2 TFLLRVVLPDRPGSLGAVASALGEAGADILGVDVVERADGSAVDDLTVELPSGRPPDVLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATAR-LQVLVNEAPRVLRVSWC 121
TAAE++ GV+V+SVRP++G L+ HRELELLD +A G A LQ+L E PR+ R W
Sbjct 62 TAAESVRGVQVESVRPYSGRLDTHRELELLDRIA---GEPAHGLQLLAEEVPRLFRAGWA 118
Query 122 TVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAP 181
V G RLA S APETRA PWLP+ +A +D WVP+ WR +DT + AAP
Sbjct 119 LVAVREGQRSWRLAESSAAPETRAGDLPWLPLAKAIVIDPDEHWVPEPWRALDTELAAAP 178
Query 182 LG--DTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
LG +V+GRP GP FRPSE+ARL +LAGIV T+L
Sbjct 179 LGPASVMQVLVVGRPGGPAFRPSELARLSHLAGIVTTVL 217
>gi|134102612|ref|YP_001108273.1| amino acid-binding ACT [Saccharopolyspora erythraea NRRL 2338]
gi|291004703|ref|ZP_06562676.1| amino acid-binding ACT [Saccharopolyspora erythraea NRRL 2338]
gi|133915235|emb|CAM05348.1| amino acid-binding ACT [Saccharopolyspora erythraea NRRL 2338]
Length=228
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/217 (52%), Positives = 150/217 (70%), Gaps = 5/217 (2%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
S+L+R+++ DRPG+LG++A ALG +GADILS+DVVERGN AIDD+VVELP G +PD LI
Sbjct 13 SFLIRVQIPDRPGTLGAVASALGEIGADILSVDVVERGNDMAIDDMVVELPSGRLPDVLI 72
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATAR-LQVLVNEAPRVLRVSWC 121
TAAE++ GV VD+VRP+ G+L+ HRELEL++ +AA AR LQ+ PR++R W
Sbjct 73 TAAESVAGVEVDAVRPYAGVLDTHRELELVEEIAA---EPARGLQIFAEGVPRIIRSGWA 129
Query 122 TVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAP 181
V G +LA S AP+ PWLP+ RA LDG WVP+ W+++ T + A P
Sbjct 130 VVFGHRSGGAEQLAASTSAPQEGYLELPWLPLPRATILDGDEPWVPETWQELGTELAATP 189
Query 182 LGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
+G ++ GRP GP FR +EVARL +LAGIV+ +L
Sbjct 190 IGKPDRVLLAGRPGGPMFRAAEVARLAHLAGIVSVVL 226
>gi|257054927|ref|YP_003132759.1| ACT domain-containing protein [Saccharomonospora viridis DSM
43017]
gi|256584799|gb|ACU95932.1| ACT domain-containing protein [Saccharomonospora viridis DSM
43017]
Length=222
Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/222 (51%), Positives = 155/222 (70%), Gaps = 8/222 (3%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
S+L+R++L D PG+LG++A ALG GADILS++VVERGNG AIDD VVELP G +PDTLI
Sbjct 2 SFLIRVQLPDAPGTLGAVASALGMAGADILSVNVVERGNGIAIDDFVVELPAGRLPDTLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE+++GV VD+VRP+ G+L+ HRELEL++ +A+ + L++L + PR++R W
Sbjct 62 TAAESVDGVEVDAVRPYAGVLDTHRELELVEAIASQ--PESGLELLADGVPRIVRAGWSI 119
Query 123 VLRSSGGE-----LHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTM 177
V+ + + RLA S APE PWLP+E A LD A WVP+ WR++ T +
Sbjct 120 VVEVGSEDDGDSGVTRLASSTAAPEAPLGELPWLPLEHATVLDAEAPWVPEMWRELGTEL 179
Query 178 VAAPLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
A P+G A+++GRP GP FR +EVARL +LAGIV +L+
Sbjct 180 AATPIGKPERALLVGRPGGPMFRAAEVARLAHLAGIVTVVLQ 221
>gi|256380029|ref|YP_003103689.1| amino acid-binding ACT domain-containing protein [Actinosynnema
mirum DSM 43827]
gi|255924332|gb|ACU39843.1| amino acid-binding ACT domain protein [Actinosynnema mirum DSM
43827]
Length=215
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/216 (52%), Positives = 148/216 (69%), Gaps = 5/216 (2%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
S+L+R++L DRPG+LG++A ALG +GADILS+DVVER G AIDDLVVELP G +PD LI
Sbjct 2 SFLIRVQLPDRPGTLGAVASALGEIGADILSVDVVERSPGVAIDDLVVELPSGRLPDGLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE++ GV VD+VRP+ G+L HRELEL++ V A+ L V P+++R W
Sbjct 62 TAAESVEGVEVDAVRPYAGVLNTHRELELVEEV--ADEPAKGLAVFTEGVPKIIRAGWAV 119
Query 123 VLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMVAAPL 182
V+ G +R+ S APE+ PW+P+ RA LDG WVP+ WR++ T + A PL
Sbjct 120 VIEIDGSG-YRVTASAAAPES-VELPPWMPLARATVLDGEDGWVPETWRELGTELAATPL 177
Query 183 GDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
G +++GRP GP FR +EVARL +LAGIVA +L
Sbjct 178 GRADRVLLVGRPGGPMFRAAEVARLAHLAGIVAVVL 213
>gi|284992467|ref|YP_003411021.1| amino acid-binding ACT domain-containing protein [Geodermatophilus
obscurus DSM 43160]
gi|284065712|gb|ADB76650.1| amino acid-binding ACT domain protein [Geodermatophilus obscurus
DSM 43160]
Length=226
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/219 (50%), Positives = 145/219 (67%), Gaps = 5/219 (2%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
SYLLR+ + DRPG LG++A ALG G DI+S+DV+ERG+G A+DD+VV+LPPG +PD+LI
Sbjct 2 SYLLRLVVPDRPGILGAVATALGESGIDIVSVDVLERGSGVAVDDIVVDLPPGRLPDSLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEG---ATARLQVLVNEAPRVLRVS 119
TA++ + GV+V+S+RP G L+ HRELELL+ +A A T +++L E PRV
Sbjct 62 TASQRVPGVQVESLRPFAGPLDTHRELELLESLARAATPGPPTLAVKLLAAELPRVFHSG 121
Query 120 WCTVLRSSG-GELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMV 178
W VL G G LA S AP + PWLP+ A L ADW+P+ WR+M M+
Sbjct 122 WAVVLSGDGEGPCEVLAASDAAPTFDGRTVPWLPLSSARLLPSEADWLPERWREMAIEMM 181
Query 179 AAPLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATM 216
A P G TAVV+GR GP FR SE+ RL +LAGI A++
Sbjct 182 ATPFGSPRTAVVIGRSGGPAFRRSELLRLVHLAGIAASV 220
>gi|258651691|ref|YP_003200847.1| amino acid-binding ACT domain-containing protein [Nakamurella
multipartita DSM 44233]
gi|258554916|gb|ACV77858.1| amino acid-binding ACT domain protein [Nakamurella multipartita
DSM 44233]
Length=228
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/219 (50%), Positives = 141/219 (65%), Gaps = 7/219 (3%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDTLI 62
S++LR+ L DRPG+LG++A ALG VGADIL++DVVER A+DD+VV LP G PD+LI
Sbjct 2 SFVLRVVLPDRPGTLGAVATALGEVGADILAMDVVERSPDLAVDDIVVALPSGRQPDSLI 61
Query 63 TAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCT 122
TAAE + GV V+SVRP G+ H+E EL++ +AA +Q L P VLR W
Sbjct 62 TAAEGVEGVHVESVRPDPGIAARHKEWELVEAIAA--DPKQAVQTLARMLPLVLRAGWAM 119
Query 123 VLRSSG----GELHRLAGSPGAPETRANSAPWLPIERAAALDGGADWVPQAWRDMDTTMV 178
V+R+ G LAG G P+ A + W PI++A LD A WVPQ W+ + T M
Sbjct 120 VVRTPANGGPGSAELLAGGGGVPDLTAVTPGWSPIDKAVVLDPEAPWVPQDWKTVGTEMA 179
Query 179 AAPLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATM 216
AAPL D T V++GRP GP R SEVARLG+LAG+ + +
Sbjct 180 AAPLWDPETTVIVGRPGGPAIRDSEVARLGHLAGLTSVV 218
>gi|319951545|ref|ZP_08025349.1| amino acid-binding ACT domain protein [Dietzia cinnamea P4]
gi|319434793|gb|EFV90109.1| amino acid-binding ACT domain protein [Dietzia cinnamea P4]
Length=220
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/219 (56%), Positives = 146/219 (67%), Gaps = 7/219 (3%)
Query 1 VRSYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGNGYAIDDLVVELPPGAMPDT 60
V SYLLR+ L DRPGSLGSLAVALG+V ADI+SLDVV+R +G A+DD+VV++P G PDT
Sbjct 3 VMSYLLRVMLPDRPGSLGSLAVALGTVDADIVSLDVVDRFDGVAVDDIVVDVPHGTFPDT 62
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAAE L+GV VDS+RP G+L+AHRELEL+D VA A Q+L +E P LRV W
Sbjct 63 LITAAERLDGVVVDSLRPFGGILDAHRELELIDAVAGA--GAGAAQMLADEIPAALRVGW 120
Query 121 CTVLRSSGGELHRL-AGSPGAPETRANSAPWLP-IERAAALDGGADWVPQAWRDMDTTMV 178
VL +G RL A AP P + + R ALD D VP W MDT +
Sbjct 121 ALVLEVTGDATCRLVARGESAPMWEGGEVPVVCGLARVTALDDD-DEVPAEWTAMDTALA 179
Query 179 AAPLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATM 216
AAPL H VV GRP GP FRPSE+ARLGYL GI+ ++
Sbjct 180 AAPLNAGHVLVV-GRPGGPSFRPSEIARLGYLTGILRSL 217
>gi|237785836|ref|YP_002906541.1| hypothetical protein ckrop_1254 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758748|gb|ACR17998.1| hypothetical protein ckrop_1254 [Corynebacterium kroppenstedtii
DSM 44385]
Length=220
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/219 (43%), Positives = 134/219 (62%), Gaps = 5/219 (2%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERG--NGYAIDDLVVELPPGAMPDT 60
S+LLR+ L D PGSLG LA ++G VG DI S+D+V +G +DD+V++LPP ++PDT
Sbjct 2 SFLLRVFLPDAPGSLGRLAASIGEVGGDIRSVDIVSHNFSDGAVVDDIVIDLPPTSLPDT 61
Query 61 LITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSW 120
LITAA+ ++GV VDS+RP +G + ++ +L +A A + LQ+LV+ P + W
Sbjct 62 LITAAQQVDGVEVDSIRPFSGSVNRSGQVAMLASIAQAPSRSKALQLLVDGLPTTMSAGW 121
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALD-GGADWVPQAWRDMDTTMVA 179
VL S ++HRLA S APE P+ A LD DW+P++W MD+ + A
Sbjct 122 AIVL-SGQTDVHRLAASMAAPEDDGRILQSTPVTTARCLDREDDDWLPESWTVMDSALAA 180
Query 180 APLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATML 217
AP+ D +V+GRP GP+F EV LG L I++ M+
Sbjct 181 APISDEDEVLVIGRPGGPDFLAGEVEHLGKLGTILSAMM 219
>gi|305682040|ref|ZP_07404844.1| ACT domain protein [Corynebacterium matruchotii ATCC 14266]
gi|305658513|gb|EFM48016.1| ACT domain protein [Corynebacterium matruchotii ATCC 14266]
Length=220
Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/219 (41%), Positives = 139/219 (64%), Gaps = 4/219 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVER-GNGYAIDDLVVELPPGAMPDTL 61
SYL+R+ L D PGSLG LA A+G+VG +I S+DVVE +G +DD+V+ LP M D L
Sbjct 2 SYLIRVLLPDAPGSLGRLAEAIGTVGGNIKSVDVVESLPDGTVMDDMVISLPTNTMADVL 61
Query 62 ITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWC 121
I+AA + GV VDS+RP +G ++ ++++L VA A + ++ L++ P+VL SW
Sbjct 62 ISAAHMVEGVVVDSIRPFSGTVDRRGQIKMLVDVAGASSNSDKIAQLIDNIPQVLTSSWA 121
Query 122 TVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGAD-WVPQAWRDMDTTMVAA 180
+L G + R+ S GAPE ++ + I A L+ D W+P++W +D+++ AA
Sbjct 122 -ILLEDGSPVRRITASYGAPEDDGSTPSLINITAAQILNPAEDTWIPESWALLDSSLAAA 180
Query 181 PLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
PLG++ +++GR GPE+ PSEV +GYL I++ ML+
Sbjct 181 PLGNSGLVLIIGRVGGPEYLPSEVEHIGYLGTILSRMLQ 219
>gi|311740578|ref|ZP_07714405.1| amino acid-binding ACT domain protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304098|gb|EFQ80174.1| amino acid-binding ACT domain protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length=223
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/219 (42%), Positives = 135/219 (62%), Gaps = 4/219 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERG-NGYAIDDLVVELPPGAMPDTL 61
S+L+R+ L D PGSLG LA A G V +I S+D+VE +G +DD+V+ELP GAM D L
Sbjct 6 SFLIRVLLPDAPGSLGQLADAFGLVDGNIQSVDIVENFPDGTVMDDIVIELPQGAMADVL 65
Query 62 ITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWC 121
ITAA +++GV +DS+RP +G ++ ++ELL VA A TA ++ +V P+ L +WC
Sbjct 66 ITAASSVDGVEIDSIRPFSGRVDRRGQIELLARVAHATNVTAAMEEVVAAIPKALTSTWC 125
Query 122 TVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGAD-WVPQAWRDMDTTMVAA 180
V+ + + RLA S APE + +E A L D WVP++W +D+ + AA
Sbjct 126 IVI-DNNEPIRRLASSNAAPEDDGTVPHDIEVESARVLQPERDEWVPESWSLLDSALAAA 184
Query 181 PLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
PLGDT + +GR GP++ SEV LG++ I+ + L+
Sbjct 185 PLGDTGLVIAMGRTGGPDYLASEVEHLGHIGTILGSFLK 223
>gi|255324553|ref|ZP_05365670.1| amino acid-binding ACT [Corynebacterium tuberculostearicum SK141]
gi|255298459|gb|EET77759.1| amino acid-binding ACT [Corynebacterium tuberculostearicum SK141]
Length=219
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/219 (42%), Positives = 134/219 (62%), Gaps = 4/219 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERG-NGYAIDDLVVELPPGAMPDTL 61
S+L+R+ L D PGSLG LA A G V +I S+D+VE +G +DD+V+ELP G M D L
Sbjct 2 SFLIRVLLPDAPGSLGQLADAFGLVDGNIQSVDIVENFPDGTVMDDIVIELPQGTMADVL 61
Query 62 ITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWC 121
ITAA +++GV +DS+RP +G ++ ++ELL VA A TA ++ +V P+ L +WC
Sbjct 62 ITAASSVDGVEIDSIRPFSGRVDRRGQIELLARVAHATNVTAAMEEVVAAIPKALTSTWC 121
Query 122 TVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGAD-WVPQAWRDMDTTMVAA 180
V+ + + RLA S APE + +E A L D WVP++W +D+ + AA
Sbjct 122 IVI-DNNEPIRRLASSNAAPEDDGTVPHDIEVESARVLQPERDEWVPKSWSLLDSALAAA 180
Query 181 PLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
PLGDT + +GR GP++ SEV LG++ I+ + L+
Sbjct 181 PLGDTGLVIAMGRTGGPDYLASEVEHLGHIGTILGSFLK 219
>gi|38233672|ref|NP_939439.1| hypothetical protein DIP1078 [Corynebacterium diphtheriae NCTC
13129]
gi|38199933|emb|CAE49601.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length=220
Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/219 (41%), Positives = 137/219 (63%), Gaps = 4/219 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVE-RGNGYAIDDLVVELPPGAMPDTL 61
SYL+R+++ D PGSLG +A A+G +G +I S+DVVE NG DD+VVELP G M D L
Sbjct 2 SYLIRVQIPDEPGSLGRVAEAVGLIGGNISSVDVVEAFSNGTVTDDMVVELPAGTMADEL 61
Query 62 ITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWC 121
ITAA + GV VDS+RP +G ++ ++ +L VA A + L +VN+ P+ L SW
Sbjct 62 ITAAHEVEGVEVDSIRPFSGRVDRRGQIAMLASVAGASTNSTLLADMVNKMPQALTSSWA 121
Query 122 TVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGAD-WVPQAWRDMDTTMVAA 180
+LR+ + R+ S GAP ++ LPIE+A L + W+P++W +D++++AA
Sbjct 122 ILLRAK-NPVTRVTASNGAPADDGSNPSALPIEQARILQPEKESWIPESWAILDSSLIAA 180
Query 181 PLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
PL T +V+GR GP++ SE+ +G L I+ ++L+
Sbjct 181 PLTGTDLVLVIGRVGGPDYLSSEIEHIGNLGKILGSLLK 219
>gi|225022721|ref|ZP_03711913.1| hypothetical protein CORMATOL_02766 [Corynebacterium matruchotii
ATCC 33806]
gi|224944629|gb|EEG25838.1| hypothetical protein CORMATOL_02766 [Corynebacterium matruchotii
ATCC 33806]
Length=214
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/212 (41%), Positives = 133/212 (63%), Gaps = 4/212 (1%)
Query 10 LADRPGSLGSLAVALGSVGADILSLDVVER-GNGYAIDDLVVELPPGAMPDTLITAAEAL 68
L D PGSLG LA A+G+VG +I S+DVVE +G +DD+V+ LP M D LI+AA +
Sbjct 3 LPDAPGSLGRLAEAIGTVGGNIKSVDVVESLPDGTVMDDMVISLPTNTMADVLISAAHMV 62
Query 69 NGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWCTVLRSSG 128
GV VDS+RP +G ++ ++++L VA A + ++ L++ P+VL SW +L G
Sbjct 63 EGVVVDSIRPFSGTVDRRGQIKMLVDVAGASSNSDKIAQLIDNIPQVLTSSWA-ILLEDG 121
Query 129 GELHRLAGSPGAPETRANSAPWLPIERAAALDGGAD-WVPQAWRDMDTTMVAAPLGDTHT 187
+ R+ S GAPE ++ + I A L+ D W+P++W +D+++ AAPLG++
Sbjct 122 SPVRRITASYGAPEDDGSTPSLINITAAQILNPAEDTWIPESWALLDSSLAAAPLGNSGL 181
Query 188 AVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
+++GR GPE+ PSEV +GYL I++ ML+
Sbjct 182 VLIIGRVGGPEYLPSEVEHIGYLGTILSRMLQ 213
>gi|145295384|ref|YP_001138205.1| hypothetical protein cgR_1322 [Corynebacterium glutamicum R]
gi|140845304|dbj|BAF54303.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045645|gb|EGV41315.1| hypothetical protein CgS9114_02973 [Corynebacterium glutamicum
S9114]
Length=221
Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/220 (41%), Positives = 137/220 (63%), Gaps = 5/220 (2%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERG-NGYAIDDLVVELPPGAMPDTL 61
S+L+R+ L+D PGSL LA ALG V A+I S+DVVER NG +DDLV+ +P M DT+
Sbjct 2 SFLIRVLLSDTPGSLALLAEALGIVEANIQSVDVVERFPNGTVMDDLVISIPRDVMADTI 61
Query 62 ITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAA-EGATARLQVLVNEAPRVLRVSW 120
ITAAE ++GV +DS+RP +G ++ ++++L VA TA ++ +V+ PR + W
Sbjct 62 ITAAEEVDGVEIDSIRPFSGTVDRRGQIQMLAAVAHQRRDITAAMEEMVDVIPRTMTSGW 121
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGAD-WVPQAWRDMDTTMVA 179
V+ G + R+AGS APE + ++ A L+ D W+P++W +D+++
Sbjct 122 ALVIDLK-GPITRIAGSLAAPEDDGTVPENIVLKEARMLNPENDPWIPESWTLLDSSLAI 180
Query 180 APLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
AP+G A+++GRP GP+F PSEV LG + I+ ML+
Sbjct 181 APIGKHGLALIIGRPGGPDFLPSEVEHLGQVGDIIGAMLQ 220
>gi|227548042|ref|ZP_03978091.1| amino acid-binding ACT [Corynebacterium lipophiloflavum DSM 44291]
gi|227079896|gb|EEI17859.1| amino acid-binding ACT [Corynebacterium lipophiloflavum DSM 44291]
Length=221
Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/220 (42%), Positives = 128/220 (59%), Gaps = 4/220 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERGN-GYAIDDLVVELPPGAMPDTL 61
SYL+R+ L D PGSLG LA A G + ADI S+D+V+ G DD+VVELP G + D L
Sbjct 2 SYLIRVHLPDVPGSLGELAEAFGMIDADIRSVDIVQMDRAGVVTDDIVVELPTGTLVDAL 61
Query 62 ITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEG-ATARLQVLVNEAPRVLRVSW 120
ITAA ++ G VDS+RP TG ++ ++++L +A G TA Q LV+ P+ + SW
Sbjct 62 ITAARSIEGAEVDSIRPFTGTVDRRGQIQMLARIADTTGDVTAAAQELVSVMPQAMTSSW 121
Query 121 CTVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGAD-WVPQAWRDMDTTMVA 179
VLR + L R+A S AP + + + A L +D WVP+AW +DTT+
Sbjct 122 AVVLRDTSEGLERVAASQAAPGDDGSKPTLVDVTTARILQRDSDTWVPEAWWLLDTTLAI 181
Query 180 APLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
PL T +V+GR GP+F SEV ++ L I+ MLR
Sbjct 182 TPLAGTDLVLVVGRVGGPDFLASEVTQIRDLGHIIGAMLR 221
>gi|337290542|ref|YP_004629563.1| hypothetical protein CULC22_00931 [Corynebacterium ulcerans BR-AD22]
gi|334696655|gb|AEG81452.1| hypothetical protein CULC809_00916 [Corynebacterium ulcerans
809]
gi|334698848|gb|AEG83644.1| hypothetical protein CULC22_00931 [Corynebacterium ulcerans BR-AD22]
Length=220
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/219 (42%), Positives = 134/219 (62%), Gaps = 4/219 (1%)
Query 3 SYLLRIELADRPGSLGSLAVALGSVGADILSLDVVERG-NGYAIDDLVVELPPGAMPDTL 61
SYL+R+ + D PGSLG LA A+G V +I S+DVVE +G +DD+V+ELP G M D L
Sbjct 2 SYLIRVHIPDAPGSLGRLAEAIGLVDGNISSVDVVESFPDGTVMDDMVIELPAGTMADAL 61
Query 62 ITAAEALNGVRVDSVRPHTGLLEAHRELELLDHVAAAEGATARLQVLVNEAPRVLRVSWC 121
ITAA + GV VDS+RP +G ++ ++ +L VA A + L LVN P+ L +W
Sbjct 62 ITAAHEVEGVDVDSIRPFSGRVDRRGQIAMLASVAGANTHSDSLAKLVNNMPQALTSTWA 121
Query 122 TVLRSSGGELHRLAGSPGAPETRANSAPWLPIERAAALDGGAD-WVPQAWRDMDTTMVAA 180
+L GG + R+ S APE +S +PI++A L ++ W+PQ+W +D+++ AA
Sbjct 122 VLLDVHGG-VTRVTASIAAPEDDGSSPDIVPIQQARTLIPESEPWIPQSWGLLDSSLAAA 180
Query 181 PLGDTHTAVVLGRP-GPEFRPSEVARLGYLAGIVATMLR 218
PL T+ +V+GR GP++ SEV LG L I+ +L
Sbjct 181 PLIGTNLVLVIGRVGGPDYLSSEVEHLGNLGTILGRILN 219
Lambda K H
0.318 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 267044465184
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40