BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3014c Length=691 Score E Sequences producing significant alignments: (Bits) Value gi|15610151|ref|NP_217530.1| NAD-dependent DNA ligase LigA [Myco... 1387 0.0 gi|298526485|ref|ZP_07013894.1| DNA ligase [NAD dependent] ligA ... 1386 0.0 gi|289746820|ref|ZP_06506198.1| NAD-dependent DNA ligase LigA [M... 1384 0.0 gi|340628004|ref|YP_004746456.1| putative DNA ligase [Mycobacter... 1379 0.0 gi|308377195|ref|ZP_07441467.2| NAD-dependent DNA ligase ligA [M... 1364 0.0 gi|289763195|ref|ZP_06522573.1| DNA ligase [NAD dependent] ligA ... 1267 0.0 gi|240168924|ref|ZP_04747583.1| NAD-dependent DNA ligase LigA [M... 1234 0.0 gi|183981708|ref|YP_001849999.1| NAD-dependent DNA ligase LigA [... 1220 0.0 gi|118617527|ref|YP_905859.1| NAD-dependent DNA ligase LigA [Myc... 1208 0.0 gi|15827911|ref|NP_302174.1| NAD-dependent DNA ligase LigA [Myco... 1180 0.0 gi|194307280|gb|ACF42137.1| DNA ligase [Mycobacterium lepromatosis] 1158 0.0 gi|308375959|ref|ZP_07668156.1| NAD-dependent DNA ligase ligA [M... 1146 0.0 gi|120403104|ref|YP_952933.1| NAD-dependent DNA ligase LigA [Myc... 1135 0.0 gi|296171259|ref|ZP_06852663.1| DNA ligase [Mycobacterium parasc... 1130 0.0 gi|254820448|ref|ZP_05225449.1| NAD-dependent DNA ligase LigA [M... 1126 0.0 gi|118465270|ref|YP_883031.1| NAD-dependent DNA ligase LigA [Myc... 1121 0.0 gi|336459169|gb|EGO38116.1| DNA ligase, NAD-dependent [Mycobacte... 1121 0.0 gi|108798849|ref|YP_639046.1| NAD-dependent DNA ligase LigA [Myc... 1118 0.0 gi|315445158|ref|YP_004078037.1| DNA ligase, NAD-dependent [Myco... 1112 0.0 gi|145224827|ref|YP_001135505.1| NAD-dependent DNA ligase LigA [... 1112 0.0 gi|254776288|ref|ZP_05217804.1| NAD-dependent DNA ligase LigA [M... 1110 0.0 gi|118470314|ref|YP_886705.1| NAD-dependent DNA ligase LigA [Myc... 1106 0.0 gi|333991377|ref|YP_004523991.1| NAD-dependent DNA ligase LigA [... 1104 0.0 gi|342858159|ref|ZP_08714814.1| NAD-dependent DNA ligase LigA [M... 1103 0.0 gi|169630426|ref|YP_001704075.1| NAD-dependent DNA ligase LigA [... 1097 0.0 gi|226365931|ref|YP_002783714.1| NAD-dependent DNA ligase LigA [... 1053 0.0 gi|111023430|ref|YP_706402.1| NAD-dependent DNA ligase LigA [Rho... 1044 0.0 gi|229493359|ref|ZP_04387148.1| DNA ligase, NAD-dependent [Rhodo... 1042 0.0 gi|226305867|ref|YP_002765827.1| NAD(+)-dependent DNA ligase [Rh... 1037 0.0 gi|81373659|sp|Q5YRS7.1|DNLJ2_NOCFA RecName: Full=DNA ligase 2; ... 1037 0.0 gi|161598439|ref|YP_120478.2| NAD-dependent DNA ligase LigA [Noc... 1037 0.0 gi|289444580|ref|ZP_06434324.1| DNA ligase, NAD-dependent [Mycob... 1036 0.0 gi|312140511|ref|YP_004007847.1| DNA ligase (nad+) liga [Rhodoco... 1036 0.0 gi|325675870|ref|ZP_08155554.1| DNA ligase [Rhodococcus equi ATC... 1034 0.0 gi|343926870|ref|ZP_08766363.1| DNA ligase [Gordonia alkanivoran... 1031 0.0 gi|262203140|ref|YP_003274348.1| DNA ligase, NAD-dependent [Gord... 1017 0.0 gi|333920877|ref|YP_004494458.1| DNA ligase [Amycolicicoccus sub... 1013 0.0 gi|326381521|ref|ZP_08203215.1| NAD-dependent DNA ligase LigA [G... 999 0.0 gi|254233094|ref|ZP_04926421.1| DNA ligase [NAD dependent] ligA ... 991 0.0 gi|296140594|ref|YP_003647837.1| DNA ligase, NAD-dependent [Tsuk... 976 0.0 gi|134102614|ref|YP_001108275.1| NAD-dependent DNA ligase LigA [... 966 0.0 gi|339295848|gb|AEJ47959.1| NAD-dependent DNA ligase LigA [Mycob... 962 0.0 gi|302524940|ref|ZP_07277282.1| DNA ligase, NAD-dependent [Strep... 953 0.0 gi|257054924|ref|YP_003132756.1| NAD-dependent DNA ligase LigA [... 953 0.0 gi|253797891|ref|YP_003030892.1| NAD-dependent DNA ligase ligA [... 951 0.0 gi|300783591|ref|YP_003763882.1| DNA ligase (NAD+) [Amycolatopsi... 940 0.0 gi|319951546|ref|ZP_08025350.1| NAD-dependent DNA ligase LigA [D... 938 0.0 gi|317507336|ref|ZP_07965075.1| DNA ligase [Segniliparus rugosus... 928 0.0 gi|152965283|ref|YP_001361067.1| DNA ligase, NAD-dependent [Kine... 921 0.0 gi|256380031|ref|YP_003103691.1| DNA ligase, NAD-dependent [Acti... 909 0.0 >gi|15610151|ref|NP_217530.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis H37Rv] gi|31794191|ref|NP_856684.1| NAD-dependent DNA ligase LigA [Mycobacterium bovis AF2122/97] gi|121638896|ref|YP_979120.1| NAD-dependent DNA ligase LigA [Mycobacterium bovis BCG str. Pasteur 1173P2] 58 more sequence titles Length=691 Score = 1387 bits (3590), Expect = 0.0, Method: Compositional matrix adjust. Identities = 690/691 (99%), Positives = 691/691 (100%), Gaps = 0/691 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE Sbjct 1 MSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC Sbjct 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE Sbjct 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH Sbjct 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK Sbjct 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG Sbjct 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE Sbjct 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA Sbjct 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 Query 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT Sbjct 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 Query 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM Sbjct 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 Query 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG Sbjct 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 Query 661 SKYDKAVELGVPILDEDGFRRLLADGPASRT 691 SKYDKAVELGVPILDEDGFRRLLADGPASRT Sbjct 661 SKYDKAVELGVPILDEDGFRRLLADGPASRT 691 >gi|298526485|ref|ZP_07013894.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis 94_M4241A] gi|298496279|gb|EFI31573.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis 94_M4241A] Length=691 Score = 1386 bits (3588), Expect = 0.0, Method: Compositional matrix adjust. Identities = 689/691 (99%), Positives = 691/691 (100%), Gaps = 0/691 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE Sbjct 1 MSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC Sbjct 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE Sbjct 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH Sbjct 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK Sbjct 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG Sbjct 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE Sbjct 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA Sbjct 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 Query 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT Sbjct 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 Query 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 AARALATEFGSLDAIAAASTDQ+AAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM Sbjct 541 AARALATEFGSLDAIAAASTDQVAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 Query 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG Sbjct 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 Query 661 SKYDKAVELGVPILDEDGFRRLLADGPASRT 691 SKYDKAVELGVPILDEDGFRRLLADGPASRT Sbjct 661 SKYDKAVELGVPILDEDGFRRLLADGPASRT 691 >gi|289746820|ref|ZP_06506198.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 02_1987] gi|289687348|gb|EFD54836.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 02_1987] Length=691 Score = 1384 bits (3582), Expect = 0.0, Method: Compositional matrix adjust. Identities = 689/691 (99%), Positives = 690/691 (99%), Gaps = 0/691 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE Sbjct 1 MSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC Sbjct 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE Sbjct 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH Sbjct 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK Sbjct 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG Sbjct 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE Sbjct 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 C SPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA Sbjct 421 CRSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 Query 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT Sbjct 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 Query 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM Sbjct 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 Query 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG Sbjct 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 Query 661 SKYDKAVELGVPILDEDGFRRLLADGPASRT 691 SKYDKAVELGVPILDEDGFRRLLADGPASRT Sbjct 661 SKYDKAVELGVPILDEDGFRRLLADGPASRT 691 >gi|340628004|ref|YP_004746456.1| putative DNA ligase [Mycobacterium canettii CIPT 140010059] gi|340006194|emb|CCC45368.1| putative DNA ligase [NAD dependent] LIGA (polydeoxyribonucleotide synthase [NAD+]) [Mycobacterium canettii CIPT 140010059] Length=691 Score = 1379 bits (3569), Expect = 0.0, Method: Compositional matrix adjust. Identities = 686/691 (99%), Positives = 689/691 (99%), Gaps = 0/691 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE Sbjct 1 MSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC Sbjct 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE Sbjct 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH Sbjct 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK Sbjct 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG Sbjct 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE Sbjct 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA Sbjct 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 Query 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 DEG+LFALTE+DLLRTDLFRTKAGELSANGKRLL NLDKAKAAPLWRVLVALSIRHVGPT Sbjct 481 DEGDLFALTEQDLLRTDLFRTKAGELSANGKRLLANLDKAKAAPLWRVLVALSIRHVGPT 540 Query 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWF VDWHREIVDKWRAAGVRM Sbjct 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFDVDWHREIVDKWRAAGVRM 600 Query 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG Sbjct 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 Query 661 SKYDKAVELGVPILDEDGFRRLLADGPASRT 691 SKYDKAVELGVPILDEDGFRRLLADGPASRT Sbjct 661 SKYDKAVELGVPILDEDGFRRLLADGPASRT 691 >gi|308377195|ref|ZP_07441467.2| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu008] gi|13882885|gb|AAK47423.1| DNA ligase [Mycobacterium tuberculosis CDC1551] gi|308348655|gb|EFP37506.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu008] Length=679 Score = 1364 bits (3530), Expect = 0.0, Method: Compositional matrix adjust. Identities = 678/679 (99%), Positives = 679/679 (100%), Gaps = 0/679 (0%) Query 13 VLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVG 72 +LRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVG Sbjct 1 MLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVG 60 Query 73 GAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLV 132 GAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLV Sbjct 61 GAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLV 120 Query 133 YREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDF 192 YREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDF Sbjct 121 YREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDF 180 Query 193 QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQA 252 QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQA Sbjct 181 QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQA 240 Query 253 YLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGS 312 YLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGS Sbjct 241 YLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGS 300 Query 313 TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNAS 372 TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNAS Sbjct 301 TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNAS 360 Query 373 EIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGD 432 EIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGD Sbjct 361 EIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGD 420 Query 433 ADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERD 492 ADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERD Sbjct 421 ADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERD 480 Query 493 LLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSL 552 LLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSL Sbjct 481 LLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSL 540 Query 553 DAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTL 612 DAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTL Sbjct 541 DAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTL 600 Query 613 AGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVP 672 AGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVP Sbjct 601 AGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVP 660 Query 673 ILDEDGFRRLLADGPASRT 691 ILDEDGFRRLLADGPASRT Sbjct 661 ILDEDGFRRLLADGPASRT 679 >gi|289763195|ref|ZP_06522573.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis GM 1503] gi|289710701|gb|EFD74717.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis GM 1503] Length=690 Score = 1267 bits (3278), Expect = 0.0, Method: Compositional matrix adjust. Identities = 652/702 (93%), Positives = 655/702 (94%), Gaps = 23/702 (3%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE Sbjct 1 MSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC Sbjct 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE Sbjct 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH Sbjct 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK Sbjct 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKV-- 358 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDI G P V V Sbjct 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDI------PGERRPHRADHAVCVHD 354 Query 359 AGS----TVGQATLHNASEIKRKGVLIGDTVVIRKAGDVI-----PEVLGPVVELRDGSE 409 AG VGQATLHNAS + +R GD PEVLGPVVELRDGSE Sbjct 355 AGEGGRVDVGQATLHNASRSAQG------RADLRHRGDPQGRRRDPEVLGPVVELRDGSE 408 Query 410 REFIMPTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEA 469 REFIMPTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEA Sbjct 409 REFIMPTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEA 468 Query 470 GVALLQAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVL 529 GVALLQAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVL Sbjct 469 GVALLQAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVL 528 Query 530 VALSIRHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREI 589 VALSIRHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREI Sbjct 529 VALSIRHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREI 588 Query 590 VDKWRAAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKK 649 VDKWRAAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKK Sbjct 589 VDKWRAAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKK 648 Query 650 TNYVVAGDSPGSKYDKAVELGVPILDEDGFRRLLADGPASRT 691 TNYVVAGDSPGSKYDKAVELGVPILDEDGFRRLLADGPASRT Sbjct 649 TNYVVAGDSPGSKYDKAVELGVPILDEDGFRRLLADGPASRT 690 >gi|240168924|ref|ZP_04747583.1| NAD-dependent DNA ligase LigA [Mycobacterium kansasii ATCC 12478] Length=683 Score = 1234 bits (3193), Expect = 0.0, Method: Compositional matrix adjust. Identities = 612/676 (91%), Positives = 646/676 (96%), Gaps = 0/676 (0%) Query 13 VLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVG 72 +L QWQ LAE+VREHQFRYYVRDAPII+DAEFDELLRRLE LEEQ+PELRTPDSPTQLVG Sbjct 1 MLHQWQDLAEQVREHQFRYYVRDAPIITDAEFDELLRRLEVLEEQYPELRTPDSPTQLVG 60 Query 73 GAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLV 132 GAGFAT+FEPV+HLERMLSLDNAF+A ELAAWA R+HAEVGDAA YL ELKIDGVALSLV Sbjct 61 GAGFATEFEPVEHLERMLSLDNAFSAAELAAWAARVHAEVGDAASYLTELKIDGVALSLV 120 Query 133 YREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDF 192 Y++GRLTRASTRGDGRTGEDVTLNARTI DVPERL+P DDYPVPEVLEVRGEVFFR+ DF Sbjct 121 YQQGRLTRASTRGDGRTGEDVTLNARTIDDVPERLSPSDDYPVPEVLEVRGEVFFRVADF 180 Query 193 QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQA 252 QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH +GFRPA+LHQA Sbjct 181 QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHTQGFRPASLHQA 240 Query 253 YLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGS 312 YLALRAWGLPVSEHTTL D+AGV+ERIDYWGEHRHEVDHEIDGVV+KVDEVALQRRLGS Sbjct 241 YLALRAWGLPVSEHTTLVNDMAGVQERIDYWGEHRHEVDHEIDGVVIKVDEVALQRRLGS 300 Query 313 TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNAS 372 TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGR+TPFAFMTPVKVAGSTV QATLHNAS Sbjct 301 TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAGSTVAQATLHNAS 360 Query 373 EIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGD 432 E+KRKGVLIGDTVVIRKAGDVIPEVLGPVV+LRDGSEREF+MPTTCPECG+ LAPEKEGD Sbjct 361 EVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPECGTVLAPEKEGD 420 Query 433 ADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERD 492 ADIRCPN++ CP QLRERVFHVASR+ LDIEVLGYEA VALLQA VIA EG+LFALTE D Sbjct 421 ADIRCPNSQRCPAQLRERVFHVASRSALDIEVLGYEAAVALLQAGVIASEGDLFALTEDD 480 Query 493 LLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSL 552 LLRT+LFRTKAG LSANGKRLL NLDKAKAAPLWRVLVALSIRHVGPTAARALATEFG+L Sbjct 481 LLRTELFRTKAGGLSANGKRLLANLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGTL 540 Query 553 DAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTL 612 +AIA AST+QLAAVEGVGPTIAAAV+EWF VDWHREIVDKWRAAGVRM DERDESVPRTL Sbjct 541 EAIANASTEQLAAVEGVGPTIAAAVSEWFTVDWHREIVDKWRAAGVRMADERDESVPRTL 600 Query 613 AGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVP 672 AGLT+VVTGSL GFSRD+AKEAIVARGGKAAGSVSKKT+YVVAGDSPGSKYDKAVELGVP Sbjct 601 AGLTVVVTGSLAGFSRDEAKEAIVARGGKAAGSVSKKTSYVVAGDSPGSKYDKAVELGVP 660 Query 673 ILDEDGFRRLLADGPA 688 ILDEDGFR LLA GPA Sbjct 661 ILDEDGFRELLAQGPA 676 >gi|183981708|ref|YP_001849999.1| NAD-dependent DNA ligase LigA [Mycobacterium marinum M] gi|254781377|sp|B2HIF0.1|DNLJ_MYCMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|183175034|gb|ACC40144.1| DNA ligase [NAD dependent] LigA [Mycobacterium marinum M] Length=687 Score = 1220 bits (3156), Expect = 0.0, Method: Compositional matrix adjust. Identities = 601/677 (89%), Positives = 645/677 (96%), Gaps = 0/677 (0%) Query 11 PEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQL 70 PEVLRQWQ LAE+VREHQFRYYVRDAP+I+DAEFDELLRRLEALEEQ+PELRTPDSPTQL Sbjct 3 PEVLRQWQELAEQVREHQFRYYVRDAPVITDAEFDELLRRLEALEEQYPELRTPDSPTQL 62 Query 71 VGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALS 130 VGGAGFAT+FEPV+HLERMLSLDNAF +EL AWAGRIHA+VGD+A YLCELKIDGVALS Sbjct 63 VGGAGFATEFEPVEHLERMLSLDNAFNTEELTAWAGRIHADVGDSAAYLCELKIDGVALS 122 Query 131 LVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLD 190 LVY GRLTRASTRGDGRTGEDVTLNARTI DVPERL+ +D+ +PEVLEVRGEVFFR+ Sbjct 123 LVYEGGRLTRASTRGDGRTGEDVTLNARTIEDVPERLSHSEDHRMPEVLEVRGEVFFRVA 182 Query 191 DFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLH 250 DFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH EGFRPATLH Sbjct 183 DFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHTEGFRPATLH 242 Query 251 QAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRL 310 QAYLAL+AWGLPVS+HTTL DLAGV+ERIDYWGEHRHEVDHEIDGVVVKVD+VALQRRL Sbjct 243 QAYLALQAWGLPVSQHTTLVADLAGVQERIDYWGEHRHEVDHEIDGVVVKVDDVALQRRL 302 Query 311 GSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHN 370 GSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGR+TPFAFMTPVKVAGSTV QATLHN Sbjct 303 GSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAGSTVAQATLHN 362 Query 371 ASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKE 430 ASE+KRKGVLIGDTVVIRKAGDVIPEVLGPVV+LRDGSEREF+MPTTCPECG+PLAPEKE Sbjct 363 ASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPECGTPLAPEKE 422 Query 431 GDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTE 490 GDADIRCPN R CPGQLRERVFHV+SRN LDIE+LGYEAG ALL A+VI DEG+LF LTE Sbjct 423 GDADIRCPNTRSCPGQLRERVFHVSSRNALDIEMLGYEAGAALLSARVIGDEGDLFGLTE 482 Query 491 RDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFG 550 +LLRTDLFRTKAG+LSANG+RLL NLDKAKAAPLWRVLVALSIRHVGPTAARALATEFG Sbjct 483 EELLRTDLFRTKAGDLSANGRRLLANLDKAKAAPLWRVLVALSIRHVGPTAARALATEFG 542 Query 551 SLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPR 610 S+DAI +A+T+QLAAVEGVGPTIA+AV+EWF VDWHREIV+KWRAAGVRM DERD+SVPR Sbjct 543 SIDAIVSATTEQLAAVEGVGPTIASAVSEWFTVDWHREIVEKWRAAGVRMADERDDSVPR 602 Query 611 TLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELG 670 TLAG+T+VVTGSL GFSRD+AKEAIV RGGKAAGSVSKKT+YVVAGD+PGSKYDKAVELG Sbjct 603 TLAGVTVVVTGSLPGFSRDEAKEAIVTRGGKAAGSVSKKTSYVVAGDAPGSKYDKAVELG 662 Query 671 VPILDEDGFRRLLADGP 687 VPILDEDGFR+LL GP Sbjct 663 VPILDEDGFRKLLEQGP 679 >gi|118617527|ref|YP_905859.1| NAD-dependent DNA ligase LigA [Mycobacterium ulcerans Agy99] gi|166216215|sp|A0PPW9.1|DNLJ_MYCUA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118569637|gb|ABL04388.1| DNA ligase [NAD dependent] LigA [Mycobacterium ulcerans Agy99] Length=683 Score = 1208 bits (3126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 596/675 (89%), Positives = 641/675 (95%), Gaps = 0/675 (0%) Query 13 VLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVG 72 +LRQWQ LAE+VREHQFRYYVRDAP+I+DAEFDELLRRLEALEEQ+PELRTPDSPTQLVG Sbjct 1 MLRQWQELAEQVREHQFRYYVRDAPVITDAEFDELLRRLEALEEQYPELRTPDSPTQLVG 60 Query 73 GAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLV 132 GAGFAT+FEPV+HLERMLSLDNAF +EL AWAGRIHA+VGD+A YLCELKIDGVALSLV Sbjct 61 GAGFATEFEPVEHLERMLSLDNAFNTEELTAWAGRIHADVGDSAAYLCELKIDGVALSLV 120 Query 133 YREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDF 192 Y GRLTRASTRGDGRTGEDVTLNARTI DVPERL+ +D+ +PEVLEVRGEVFFR+ DF Sbjct 121 YEGGRLTRASTRGDGRTGEDVTLNARTIEDVPERLSHSEDHRMPEVLEVRGEVFFRVADF 180 Query 193 QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQA 252 QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH EGFRPATLHQA Sbjct 181 QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHTEGFRPATLHQA 240 Query 253 YLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGS 312 YLAL+AWGLPVS+HTTL DLA V+ RIDYWGEHRHEVDHEIDGVVVKVD+VALQRRLGS Sbjct 241 YLALQAWGLPVSQHTTLVADLAEVQARIDYWGEHRHEVDHEIDGVVVKVDDVALQRRLGS 300 Query 313 TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNAS 372 TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGR+TPFAFMTPVKVAGSTV QATLHNAS Sbjct 301 TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAGSTVAQATLHNAS 360 Query 373 EIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGD 432 E+KRKGVLIGDTVVIRKAGDVIPEVLGPVV+LRDGSEREF+MPTTCPECG+PLAPEKEGD Sbjct 361 EVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPECGTPLAPEKEGD 420 Query 433 ADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERD 492 ADIRCPN R CPGQLRERVFHV+SRN LDIE+LGYEAG ALL A+VI DEG+LF LTE + Sbjct 421 ADIRCPNTRSCPGQLRERVFHVSSRNALDIEMLGYEAGAALLSARVIGDEGDLFGLTEEE 480 Query 493 LLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSL 552 LLRTDLFRTKAG+LSANG+RLL NLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGS+ Sbjct 481 LLRTDLFRTKAGDLSANGRRLLANLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSI 540 Query 553 DAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTL 612 DAI AA+T+QLAAVEGVGPTIA+AV+EWF VDWHREIV++WRAAGVRM DERD+SVPRTL Sbjct 541 DAIVAATTEQLAAVEGVGPTIASAVSEWFTVDWHREIVERWRAAGVRMADERDDSVPRTL 600 Query 613 AGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVP 672 AG+T+VVTGSL GFSRD+AKEAIV RGGKAAGSVSKKT+YVVAGD+PGSKYDKAVELGVP Sbjct 601 AGVTVVVTGSLPGFSRDEAKEAIVTRGGKAAGSVSKKTSYVVAGDAPGSKYDKAVELGVP 660 Query 673 ILDEDGFRRLLADGP 687 ILDEDGFR+LL GP Sbjct 661 ILDEDGFRKLLEQGP 675 >gi|15827911|ref|NP_302174.1| NAD-dependent DNA ligase LigA [Mycobacterium leprae TN] gi|221230388|ref|YP_002503804.1| NAD-dependent DNA ligase LigA [Mycobacterium leprae Br4923] gi|7674013|sp|O33102.1|DNLJ_MYCLE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781376|sp|B8ZS27.1|DNLJ_MYCLB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2414536|emb|CAB16425.1| DNA ligase [Mycobacterium leprae] gi|13093464|emb|CAC30658.1| DNA ligase [Mycobacterium leprae] gi|219933495|emb|CAR71800.1| DNA ligase [Mycobacterium leprae Br4923] Length=694 Score = 1180 bits (3052), Expect = 0.0, Method: Compositional matrix adjust. Identities = 582/687 (85%), Positives = 616/687 (90%), Gaps = 0/687 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SSP+AD PEVL+QW+ L EEVREHQFRYYVRDAPIISDAEFD LL RL LEEQHPE Sbjct 1 MSSPEADPIGPEVLQQWRKLTEEVREHQFRYYVRDAPIISDAEFDALLDRLTVLEEQHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 L TPDSPTQLVGGAGF TDF +HLERM SLDNAF+ DEL AW RI AE+G+ AHYLC Sbjct 61 LCTPDSPTQLVGGAGFMTDFVATEHLERMFSLDNAFSGDELNAWVTRIRAEIGNDAHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYR+GRLTRA+TRGDGRTGEDVTLNARTI DVPERLT D YP+PEVLE Sbjct 121 ELKIDGVALSLVYRDGRLTRATTRGDGRTGEDVTLNARTIEDVPERLTVSDIYPLPEVLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFFR+ DFQALN SLVEEGK PFANPRNSAAGSLRQKDPAVTA R+LRMICHGLGH Sbjct 181 VRGEVFFRVVDFQALNTSLVEEGKNPFANPRNSAAGSLRQKDPAVTAHRKLRMICHGLGH 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 +EGFRPAT HQAYLALR WGLPVSEHTTL D+AGV+ I YW EHRHEVDHEIDG+VVK Sbjct 241 IEGFRPATQHQAYLALRDWGLPVSEHTTLVNDIAGVQGCIAYWAEHRHEVDHEIDGIVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 +DEV LQRRLGSTSRAPRWAIAYKY PEEAQTKLLDIRVNVGRTGR+TPFAFMTPVKVAG Sbjct 301 IDEVTLQRRLGSTSRAPRWAIAYKYLPEEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVGQATLHN SE+KRKGVLIGDTVVIRKAGDVIPEVLGPVV+LRDGSEREF+MPTTCPE Sbjct 361 STVGQATLHNPSEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 CG+ LAPEKEGDADIRCPNAR CPGQLRERVFHVASR+ LDI+ LGYEAGVALL A+VI Sbjct 421 CGTTLAPEKEGDADIRCPNARSCPGQLRERVFHVASRSALDIQGLGYEAGVALLAAQVIT 480 Query 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 EG+LF LTE+ LLRT+LFR KAGELSANGKRLLVN+DKAK APLWRVLVALSIRHVGPT Sbjct 481 SEGDLFTLTEKALLRTELFRNKAGELSANGKRLLVNVDKAKTAPLWRVLVALSIRHVGPT 540 Query 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 AARALATEFGS+DAI AAS +QLAAVEGVG TIAAAVTEWF VDWHR IV+KWRAAGVRM Sbjct 541 AARALATEFGSVDAILAASPEQLAAVEGVGTTIAAAVTEWFTVDWHRVIVNKWRAAGVRM 600 Query 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 VDERD SV T GLTIVVTGSL GFSRDDAKEAIVARGGK AGSVSKK YVV GD PG Sbjct 601 VDERDTSVLPTCEGLTIVVTGSLAGFSRDDAKEAIVARGGKVAGSVSKKIAYVVVGDLPG 660 Query 661 SKYDKAVELGVPILDEDGFRRLLADGP 687 KYDKAVELGVPIL+EDGFR LL GP Sbjct 661 YKYDKAVELGVPILNEDGFRLLLEQGP 687 >gi|194307280|gb|ACF42137.1| DNA ligase [Mycobacterium lepromatosis] Length=686 Score = 1158 bits (2995), Expect = 0.0, Method: Compositional matrix adjust. Identities = 571/677 (85%), Positives = 608/677 (90%), Gaps = 0/677 (0%) Query 11 PEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQL 70 PE+LRQW+ LAEEVREHQFRYYVRDAPIISDAEFD LL RL LEEQHPELRTPDSPTQL Sbjct 3 PELLRQWRKLAEEVREHQFRYYVRDAPIISDAEFDALLGRLTVLEEQHPELRTPDSPTQL 62 Query 71 VGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALS 130 +GGAGF TDF +HLERMLSLDNA + DEL AW RI E+G+ AHYLCELK+DGVALS Sbjct 63 IGGAGFTTDFVATEHLERMLSLDNASSEDELDAWITRIRREIGNDAHYLCELKVDGVALS 122 Query 131 LVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLD 190 LVYR G L RA+TRGDG TGEDVTLNARTI DVPERLT D YP+PEVLEVRGEVFFR+ Sbjct 123 LVYRNGLLNRATTRGDGHTGEDVTLNARTIEDVPERLTVSDIYPIPEVLEVRGEVFFRVT 182 Query 191 DFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLH 250 DFQALN SLVEEGK PFANPRNSAAGSLRQKDPAVTA R LRMICHGLGH+EGFRPAT H Sbjct 183 DFQALNTSLVEEGKNPFANPRNSAAGSLRQKDPAVTAHRTLRMICHGLGHIEGFRPATQH 242 Query 251 QAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRL 310 QAYLALRAWGLPVS+HTTL D+AGV+ RI YW EHRHEVDHEIDG+VVK+DE+ALQRRL Sbjct 243 QAYLALRAWGLPVSDHTTLVNDIAGVQRRIAYWAEHRHEVDHEIDGIVVKIDELALQRRL 302 Query 311 GSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHN 370 GSTSRAPRWAIAYKY PEEAQTKLLDIRVNVGRTGR+TPFAFMTPVKVAGSTVGQATLHN Sbjct 303 GSTSRAPRWAIAYKYLPEEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAGSTVGQATLHN 362 Query 371 ASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKE 430 ASE+KRKGVLIGDTVVIRKAG+VIPE++GPVV+LRDGSE EF+MPTTCPECG+ LAPEKE Sbjct 363 ASEVKRKGVLIGDTVVIRKAGEVIPEIVGPVVDLRDGSESEFVMPTTCPECGTTLAPEKE 422 Query 431 GDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTE 490 GD DIRCPNAR CPGQLRERVFHVASR+ LDI+ LGYEAGVALL A+VI EG+LF LTE Sbjct 423 GDTDIRCPNARSCPGQLRERVFHVASRSVLDIQGLGYEAGVALLAAQVITSEGDLFTLTE 482 Query 491 RDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFG 550 DLLRT+LFR KAG+LSANGKRLLVN+DKAK APLWRVLVALSIRHVGPTAARALA EFG Sbjct 483 DDLLRTELFRNKAGKLSANGKRLLVNVDKAKTAPLWRVLVALSIRHVGPTAARALAAEFG 542 Query 551 SLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPR 610 S+DAI AAS +QLAAVEGVG IAAAVTEWFAVDWHR IVDKWRAAGVRMVDERD SVP Sbjct 543 SIDAILAASPEQLAAVEGVGAAIAAAVTEWFAVDWHRAIVDKWRAAGVRMVDERDTSVPP 602 Query 611 TLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELG 670 T GLTIVVTGSL GFSRDDAKEAIVARGGK AG+VSKK YVV GD PGSKYDKA+ELG Sbjct 603 TCEGLTIVVTGSLAGFSRDDAKEAIVARGGKVAGAVSKKIAYVVVGDLPGSKYDKAIELG 662 Query 671 VPILDEDGFRRLLADGP 687 VPILDEDGFR LL GP Sbjct 663 VPILDEDGFRLLLEQGP 679 >gi|308375959|ref|ZP_07668156.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu007] gi|308344705|gb|EFP33556.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu007] Length=614 Score = 1146 bits (2965), Expect = 0.0, Method: Compositional matrix adjust. Identities = 569/570 (99%), Positives = 570/570 (100%), Gaps = 0/570 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE Sbjct 1 MSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC Sbjct 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE Sbjct 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH Sbjct 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK Sbjct 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG Sbjct 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE Sbjct 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA Sbjct 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 Query 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT Sbjct 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 Query 541 AARALATEFGSLDAIAAASTDQLAAVEGVG 570 AARALATEFGSLDAIAAASTDQLAAVEGVG Sbjct 541 AARALATEFGSLDAIAAASTDQLAAVEGVG 570 >gi|120403104|ref|YP_952933.1| NAD-dependent DNA ligase LigA [Mycobacterium vanbaalenii PYR-1] gi|166216216|sp|A1T6X7.1|DNLJ_MYCVP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119955922|gb|ABM12927.1| DNA ligase, NAD-dependent [Mycobacterium vanbaalenii PYR-1] Length=707 Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust. Identities = 560/684 (82%), Positives = 605/684 (89%), Gaps = 3/684 (0%) Query 7 DQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDS 66 D T + RQWQ LA+EVR+HQFRYYVRDAPII+DAEFD +LRRLEALEE HPELRTPDS Sbjct 19 DATEAGLRRQWQELADEVRDHQFRYYVRDAPIITDAEFDAMLRRLEALEEAHPELRTPDS 78 Query 67 PTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDG 126 PTQLVGGAGFATDF +HLERMLSLDN FT DELAAWA RI E+G A YLCELKIDG Sbjct 79 PTQLVGGAGFATDFTAAEHLERMLSLDNVFTPDELAAWAARIRTEIGADAQYLCELKIDG 138 Query 127 VALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVF 186 VALSLVYR+GRL R +TRGDGRTGEDVTLNARTI DVPE+LT +++P+P VLEVRGEVF Sbjct 139 VALSLVYRDGRLERGATRGDGRTGEDVTLNARTIEDVPEKLTGTEEFPLPSVLEVRGEVF 198 Query 187 FRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVE---G 243 FR+ DF+ LNA LV EGK PFANPRNSAAGSLRQK+PAVTARRRLRMICHGLGH+E G Sbjct 199 FRIADFEDLNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRRLRMICHGLGHIEDAAG 258 Query 244 FRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDE 303 F TLH AY AL+AWGLPVS HT T L V ERI YWGEHRH+V+HEIDGVVVKVDE Sbjct 259 FPFRTLHDAYRALQAWGLPVSPHTAQVTGLDAVTERIAYWGEHRHDVEHEIDGVVVKVDE 318 Query 304 VALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTV 363 VALQRRLG+TSRAPRWA+AYKYPPEEAQTKLLDIRVNVGRTGR+TPFA+M PVK+AGSTV Sbjct 319 VALQRRLGATSRAPRWAVAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAYMEPVKIAGSTV 378 Query 364 GQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGS 423 G ATLHN SE+KRKGVLIGDTVVIRKAGDVIPEVLGPVV+LRDGSEREF+MPT CPECG+ Sbjct 379 GLATLHNGSEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVMPTHCPECGT 438 Query 424 PLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEG 483 LAP KEGDADIRCPN+R CP QLRERVFHVA R DIE LGYEA +ALLQA+VI DEG Sbjct 439 ELAPAKEGDADIRCPNSRTCPAQLRERVFHVAGRGAFDIEGLGYEAAIALLQARVITDEG 498 Query 484 ELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAAR 543 +LF LT DLLRTDLF TKAGELSANGKRLL NL KAKA PLWRVLVALSIRHVGPTAAR Sbjct 499 DLFTLTADDLLRTDLFTTKAGELSANGKRLLTNLGKAKAQPLWRVLVALSIRHVGPTAAR 558 Query 544 ALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDE 603 ALATEFGSLDAI AAS ++LAAVEGVGPTIAAAVT+WF VDWHR IVDKWRAAGVRM DE Sbjct 559 ALATEFGSLDAIVAASEEELAAVEGVGPTIAAAVTDWFTVDWHRTIVDKWRAAGVRMADE 618 Query 604 RDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKY 663 RD S+ RTL GL+IVVTGSLTG+SRD+AKEAI+ARGGKAAGSVSKKT YVVAGDSPGSKY Sbjct 619 RDASIERTLDGLSIVVTGSLTGYSRDEAKEAIIARGGKAAGSVSKKTAYVVAGDSPGSKY 678 Query 664 DKAVELGVPILDEDGFRRLLADGP 687 DKA+ELGVP+LDEDGFRRLL +GP Sbjct 679 DKAIELGVPVLDEDGFRRLLENGP 702 >gi|296171259|ref|ZP_06852663.1| DNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894227|gb|EFG73984.1| DNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=693 Score = 1130 bits (2923), Expect = 0.0, Method: Compositional matrix adjust. Identities = 554/687 (81%), Positives = 608/687 (89%), Gaps = 0/687 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SS +A+ +PEV R+WQ LA+EVREHQFRYY++DAPI+SDAEFD + L ALE+++PE Sbjct 1 MSSAEAEPVSPEVRRRWQELADEVREHQFRYYIKDAPIVSDAEFDTMFNDLLALEDRYPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LR PDSPTQLVGGAGFATDF HLERMLSLD+ F DEL AW R+ EVG +YLC Sbjct 61 LRVPDSPTQLVGGAGFATDFTEAAHLERMLSLDDVFDRDELVAWNNRVENEVGRDPYYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYR+GRL RA+TRGDGR GEDVTLNARTI DVPERLT D P+P VLE Sbjct 121 ELKIDGVALSLVYRDGRLERAATRGDGRVGEDVTLNARTIDDVPERLTRAADLPIPAVLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFF L DF+ALNASLVE+GKAPFANPRNSAAGSLRQK+PAVTARR+LRMICHG+G Sbjct 181 VRGEVFFMLADFEALNASLVEDGKAPFANPRNSAAGSLRQKNPAVTARRKLRMICHGIGR 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 +GF PA+LH AY AL+AWGLPV+E T LA V +RI YWGEHR+E+DHEIDGVVVK Sbjct 241 TDGFAPASLHDAYTALKAWGLPVAEQTARVRGLAAVEDRIGYWGEHRYEIDHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 VD+ ALQRRLG+TSRAPRWA+AYKYPP+EAQTKLLDIRVNVGRTGR+TPFAFMTPVKVAG Sbjct 301 VDDFALQRRLGTTSRAPRWAVAYKYPPQEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVG ATLHNA+E+KRKGVLIGDTV+IRKAGDVIPEVLGPVV+LRDGSEREF+MPTTCPE Sbjct 361 STVGLATLHNAAEVKRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 CG+ LAP KEGDADIRCPNAR CP QLRERVFHVA R LDIE LGYEA ALL+A VIA Sbjct 421 CGTTLAPAKEGDADIRCPNARSCPAQLRERVFHVAGRGALDIEGLGYEAATALLKAGVIA 480 Query 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 DEG+LF LTE DLLRTDLFRTKAG LSANG+RLL NLDKAK LWRVLVALSIRHVGPT Sbjct 481 DEGDLFTLTEDDLLRTDLFRTKAGTLSANGRRLLDNLDKAKTVALWRVLVALSIRHVGPT 540 Query 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 AARALATEFGSLDAI AAST++LAAVEGVGPTIAAA+TEWF VDWHR IVDKWRAAGVRM Sbjct 541 AARALATEFGSLDAIMAASTERLAAVEGVGPTIAAALTEWFTVDWHRAIVDKWRAAGVRM 600 Query 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 DERD SVPRTL GLT+VVTGSL GFSRDDAKEAI+ARGGKAAGSVSKKT+YVVAGD+PG Sbjct 601 ADERDASVPRTLEGLTVVVTGSLAGFSRDDAKEAIIARGGKAAGSVSKKTDYVVAGDAPG 660 Query 661 SKYDKAVELGVPILDEDGFRRLLADGP 687 SKYDKAV+LGVP+LDEDGFR LLA GP Sbjct 661 SKYDKAVKLGVPVLDEDGFRELLAGGP 687 >gi|254820448|ref|ZP_05225449.1| NAD-dependent DNA ligase LigA [Mycobacterium intracellulare ATCC 13950] Length=693 Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 559/687 (82%), Positives = 610/687 (89%), Gaps = 0/687 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SS +AD APEV RQWQ LAE VREHQFRYY++DAPIISDAEFD + L ALEE+HPE Sbjct 1 MSSAEADSVAPEVRRQWQDLAEAVREHQFRYYIKDAPIISDAEFDSMFNELLALEERHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LR DSPTQLVGGAGFATDF HLERMLSLD+ F DEL AW+ R+ EVG HYLC Sbjct 61 LRVADSPTQLVGGAGFATDFAEAQHLERMLSLDDVFDRDELVAWSNRVENEVGKEPHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYR+GRL RA+TRGDGR GEDVTLNARTI DVPERL+ G D+P P +LE Sbjct 121 ELKIDGVALSLVYRDGRLERAATRGDGRVGEDVTLNARTIDDVPERLSAGKDFPAPSLLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFF L DF+ALNASLVE+GKAPFANPRNSAAGSLRQK+PAVTARR+LRMICHG+G Sbjct 181 VRGEVFFLLADFEALNASLVEDGKAPFANPRNSAAGSLRQKNPAVTARRKLRMICHGIGR 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 EGF P T H+AY AL+AWGLPV+E T LA V ERI YWGEHR++++HEIDGVVVK Sbjct 241 TEGFAPKTQHEAYAALKAWGLPVAEQTARVRGLAAVEERIGYWGEHRYDLEHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 VD+VALQRRLG+TSRAPRWA+AYKYPP+EAQTKLLDIRVNVGRTGR+TPFAFMTPVKVAG Sbjct 301 VDDVALQRRLGTTSRAPRWAVAYKYPPQEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVG ATLHNA+E+KRKGVLIGDTV+IRKAGDVIPEVLGPVV+LRDGSEREF+MPTTCPE Sbjct 361 STVGLATLHNAAEVKRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 C +PLAP KEGDADIRCPNAR CP QLRERVFHVA R DIE LGYEA +ALL+A+VIA Sbjct 421 CDTPLAPAKEGDADIRCPNARSCPAQLRERVFHVAGRGAFDIEGLGYEAAIALLKAEVIA 480 Query 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 DEG+LF LTE DLLRT+LFRTKAG LSANG+RLL NLDKAK LWRVLVALSIRHVGPT Sbjct 481 DEGDLFTLTEDDLLRTELFRTKAGTLSANGRRLLDNLDKAKKVALWRVLVALSIRHVGPT 540 Query 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 AARALATEFG LDAI +AST++LAAVEGVGPTIAAA+TEWF VDWHR IVDKWRAAGVRM Sbjct 541 AARALATEFGDLDAIVSASTERLAAVEGVGPTIAAALTEWFTVDWHRAIVDKWRAAGVRM 600 Query 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 DERD SVPRTL GLT+VVTGSL GFSRDDAKEAI+ARGGKAAGSVSKKT+YVVAGDSPG Sbjct 601 ADERDTSVPRTLEGLTVVVTGSLAGFSRDDAKEAILARGGKAAGSVSKKTDYVVAGDSPG 660 Query 661 SKYDKAVELGVPILDEDGFRRLLADGP 687 SKYDKAVELGVP+LDEDGFRRLLADGP Sbjct 661 SKYDKAVELGVPVLDEDGFRRLLADGP 687 >gi|118465270|ref|YP_883031.1| NAD-dependent DNA ligase LigA [Mycobacterium avium 104] gi|166215821|sp|A0QJE3.1|DNLJ_MYCA1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118166557|gb|ABK67454.1| DNA ligase, NAD-dependent [Mycobacterium avium 104] Length=693 Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 558/687 (82%), Positives = 607/687 (89%), Gaps = 0/687 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SS +AD PEV RQWQ LAE VREHQFRYY++DAPIISDAEFD L L ALEE+HPE Sbjct 1 MSSAEADSVPPEVRRQWQELAETVREHQFRYYIKDAPIISDAEFDALFNELLALEERHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LR DSPTQLVGGAGFATDF HLERMLSLD+ F DEL AW+ R+ E+G HYLC Sbjct 61 LRVADSPTQLVGGAGFATDFAEAAHLERMLSLDDVFDTDELIAWSNRVENEIGKDPHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYR+GRL RA+TRGDGR GEDVTLNARTI DVPERL+P DD+PVP +LE Sbjct 121 ELKIDGVALSLVYRDGRLERAATRGDGRVGEDVTLNARTIDDVPERLSPSDDFPVPALLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFF L DF+ALNASLVE+GKAPFANPRNSAAGSLRQK+PAVTARR+LRMICHG+G Sbjct 181 VRGEVFFLLADFEALNASLVEDGKAPFANPRNSAAGSLRQKNPAVTARRKLRMICHGIGR 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 EGF P T H+AY AL WGLPV+E T LA V+ERI YWGEHR+E+ HEIDGVVVK Sbjct 241 TEGFSPKTQHEAYTALSVWGLPVAEQTARVRGLAAVQERIGYWGEHRYELQHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 VD+VALQRRLG+TSRAPRWA+AYKYPP+EAQTKLLDIRVNVGRTGR+TPFAFMTPVKVAG Sbjct 301 VDDVALQRRLGATSRAPRWAVAYKYPPQEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVG ATLHNA+E+KRKGVLIGDTV+IRKAGDVIPEVLGPVV+LRDG+EREF+MPTTCPE Sbjct 361 STVGLATLHNAAEVKRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDGTEREFVMPTTCPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 CG+PLAP KEGDADIRCPNAR CP QLRERVFHVA R LDIE LGYEA ALL+A VIA Sbjct 421 CGTPLAPAKEGDADIRCPNARSCPAQLRERVFHVAGRGALDIEGLGYEAATALLKAGVIA 480 Query 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 DEG+LFALTE DLLRT+LFRTKAG LSANG RLL NL KAK LWRVLVALSIRHVGPT Sbjct 481 DEGDLFALTEDDLLRTELFRTKAGTLSANGTRLLQNLQKAKKVALWRVLVALSIRHVGPT 540 Query 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 AARALATEFG LD+I +AST++LAAVEGVGPTIAAA+TEWF VDWHR IVDKWR AGVRM Sbjct 541 AARALATEFGDLDSIMSASTERLAAVEGVGPTIAAALTEWFTVDWHRAIVDKWRGAGVRM 600 Query 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 DERD SVPRTL GLT+VVTGSL GFSRDDAKEAI+ARGGKAAGSVSKKT+YVVAGDSPG Sbjct 601 ADERDASVPRTLEGLTVVVTGSLAGFSRDDAKEAILARGGKAAGSVSKKTDYVVAGDSPG 660 Query 661 SKYDKAVELGVPILDEDGFRRLLADGP 687 SKYDKAVELGVPILDEDGFR+LLA+GP Sbjct 661 SKYDKAVELGVPILDEDGFRKLLAEGP 687 >gi|336459169|gb|EGO38116.1| DNA ligase, NAD-dependent [Mycobacterium avium subsp. paratuberculosis S397] Length=693 Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust. Identities = 558/687 (82%), Positives = 608/687 (89%), Gaps = 0/687 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SS +AD PEV RQWQ LAE VREHQFRYY++DAPIISDAEFD L L ALEE+HPE Sbjct 1 MSSAEADSVPPEVRRQWQELAETVREHQFRYYIKDAPIISDAEFDALFNELLALEERHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LR DSPTQLVGGAGFATDF HLERMLSLD+ F DEL AW+ R+ E+G HYLC Sbjct 61 LRVADSPTQLVGGAGFATDFAEAAHLERMLSLDDVFDTDELIAWSNRVENEIGKDPHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYR+GRL RA+TRGDGR GEDVTLNARTI DVPERL+P DD+PVP +LE Sbjct 121 ELKIDGVALSLVYRDGRLERAATRGDGRVGEDVTLNARTIDDVPERLSPSDDFPVPALLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFF L DF+ALNASLVE+GKAPFANPRNSAAGSLRQK+PAVTARR+LRMICHG+G Sbjct 181 VRGEVFFLLADFEALNASLVEDGKAPFANPRNSAAGSLRQKNPAVTARRKLRMICHGIGR 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 EGF P T H+AY AL WGLPV+E T LA V+ERI YWGEHR+++ HEIDGVVVK Sbjct 241 TEGFSPKTQHEAYTALSVWGLPVAEQTARVRGLAAVQERIGYWGEHRYDLQHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 VD+VALQRRLG+TSRAPRWA+AYKYPP+EAQTKLLDIRVNVGRTGR+TPFAFMTPVKVAG Sbjct 301 VDDVALQRRLGATSRAPRWAVAYKYPPQEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVG ATLHNA+E+KRKGVLIGDTV+IRKAGDVIPEVLGPVV+LRDG+EREF+MPTTCPE Sbjct 361 STVGLATLHNAAEVKRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDGTEREFVMPTTCPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 CG+PLAP KEGDADIRCPNAR CP QLRERVFHVA R LDIE LGYEA ALL+A VIA Sbjct 421 CGTPLAPAKEGDADIRCPNARSCPAQLRERVFHVAGRGALDIEGLGYEAATALLKAGVIA 480 Query 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 DEG+LFALTE DLLRT+LFRTKAG LSANG RLL NL KAK LWRVLVALSIRHVGPT Sbjct 481 DEGDLFALTEDDLLRTELFRTKAGTLSANGTRLLQNLQKAKKVALWRVLVALSIRHVGPT 540 Query 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 AARALATEFG LD+I +AST++LAAVEGVGPTIAAA+TEWF VDWHR IVDKWRAAGVRM Sbjct 541 AARALATEFGDLDSIMSASTERLAAVEGVGPTIAAALTEWFTVDWHRAIVDKWRAAGVRM 600 Query 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 DERD SVPRTL GLT+VVTGSL GFSRDDAKEAI+ARGGKAAGSVSKKT+YVVAGDSPG Sbjct 601 ADERDASVPRTLEGLTVVVTGSLAGFSRDDAKEAILARGGKAAGSVSKKTDYVVAGDSPG 660 Query 661 SKYDKAVELGVPILDEDGFRRLLADGP 687 SKYDKAVELGVPILDEDGFR+LLA+GP Sbjct 661 SKYDKAVELGVPILDEDGFRKLLAEGP 687 >gi|108798849|ref|YP_639046.1| NAD-dependent DNA ligase LigA [Mycobacterium sp. MCS] gi|119867964|ref|YP_937916.1| NAD-dependent DNA ligase LigA [Mycobacterium sp. KMS] gi|126434449|ref|YP_001070140.1| NAD-dependent DNA ligase LigA [Mycobacterium sp. JLS] 6 more sequence titles Length=701 Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust. Identities = 543/692 (79%), Positives = 607/692 (88%), Gaps = 6/692 (0%) Query 2 SSPDA------DQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALE 55 S+PDA + E+ +WQALA+EVR+HQFRYYVRDAP+ISDA+FD+L ++LEALE Sbjct 5 STPDAGPQEQATEAEAELRHRWQALADEVRDHQFRYYVRDAPVISDADFDKLFQQLEALE 64 Query 56 EQHPELRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDA 115 +HPELR PDSPTQLVGGAGFATDF P +HLERMLSLD+ F DEL AW+ R+ AEVGD Sbjct 65 AEHPELRAPDSPTQLVGGAGFATDFTPAEHLERMLSLDDVFNVDELTAWSSRVRAEVGDD 124 Query 116 AHYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPV 175 A YLCELK+DG+AL+LVYR+GRL RA+TRGDGR GEDVTLNART+ DVPERLTP D++P Sbjct 125 AAYLCELKVDGLALALVYRDGRLERAATRGDGRVGEDVTLNARTLDDVPERLTPSDEFPH 184 Query 176 PEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMIC 235 P VLEVRGEVFFR+ DF+ALNA LV EGK PFANPRNSAAGSLRQK+PAVTARR LRM+C Sbjct 185 PAVLEVRGEVFFRVADFEALNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRPLRMVC 244 Query 236 HGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEID 295 HG+G+ EGF P +LH+AY ALRAWGLPVS+HTT + VRERI YWGEHRH+++HEID Sbjct 245 HGIGYTEGFSPTSLHEAYGALRAWGLPVSDHTTRVQGMDAVRERIAYWGEHRHDIEHEID 304 Query 296 GVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTP 355 GVVVK+D++ALQRRLG+TSRAPRWA+AYKYPPEEAQTKLLDIRVNVGRTGR+TPFA+M P Sbjct 305 GVVVKLDQIALQRRLGATSRAPRWAVAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAYMEP 364 Query 356 VKVAGSTVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMP 415 VKVAGSTVG ATLHNASE+KRKGVLIGDTVVIRKAGDVIPEVLGPVV+LRDG+EREF+MP Sbjct 365 VKVAGSTVGLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGTEREFVMP 424 Query 416 TTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQ 475 T CPECG+ LAP KEGDADIRCPN+R CP QLRERVFHVA R DIE LGYEA +ALLQ Sbjct 425 THCPECGTELAPAKEGDADIRCPNSRTCPAQLRERVFHVAGRGAFDIEGLGYEAAIALLQ 484 Query 476 AKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIR 535 A VI DEG+LF LTE DLLRT+LF TK G +SANG+RLL NL KAKA PLWRVLVALSIR Sbjct 485 AGVITDEGDLFTLTEDDLLRTELFTTKGGAVSANGRRLLANLGKAKAQPLWRVLVALSIR 544 Query 536 HVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRA 595 HVGPTAARALATEFGSLDAI AS DQLAAVEGVGPTIAAAV EWF VDWH IV+KWRA Sbjct 545 HVGPTAARALATEFGSLDAIIEASEDQLAAVEGVGPTIAAAVKEWFTVDWHCAIVEKWRA 604 Query 596 AGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVA 655 AGVRM DERD S+ RTL GL+IVVTGSL GFSRD+AKEAI+ARGGKAAGSVSKKT YVVA Sbjct 605 AGVRMADERDASIARTLEGLSIVVTGSLAGFSRDEAKEAIIARGGKAAGSVSKKTAYVVA 664 Query 656 GDSPGSKYDKAVELGVPILDEDGFRRLLADGP 687 GDSPGSKYDKA++LGVP+LDEDGFR LL +GP Sbjct 665 GDSPGSKYDKAIDLGVPVLDEDGFRNLLENGP 696 >gi|315445158|ref|YP_004078037.1| DNA ligase, NAD-dependent [Mycobacterium sp. Spyr1] gi|315263461|gb|ADU00203.1| DNA ligase, NAD-dependent [Mycobacterium sp. Spyr1] Length=701 Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust. Identities = 549/684 (81%), Positives = 600/684 (88%), Gaps = 3/684 (0%) Query 7 DQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDS 66 D P++ R WQ LA+EVREHQFRYY+RDAPII+DAEFD+LLRRL+ALE+++PELRTPDS Sbjct 8 DALDPDLRRSWQELADEVREHQFRYYIRDAPIITDAEFDQLLRRLQALEDEYPELRTPDS 67 Query 67 PTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDG 126 PTQLVGGAGFATDF +HLERMLSLDN F +ELAAWA RI E+G A YLCELKIDG Sbjct 68 PTQLVGGAGFATDFTAAEHLERMLSLDNVFDLEELAAWAARIRTEIGADAQYLCELKIDG 127 Query 127 VALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVF 186 VAL+LVYR+GRL RA+TRGDGRTGEDVTLNARTI D+PERL+ +++P+P VLEVRGEVF Sbjct 128 VALALVYRDGRLERAATRGDGRTGEDVTLNARTIEDIPERLSGTNEFPLPTVLEVRGEVF 187 Query 187 FRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVE--GF 244 FR+ DF+ LNA LV EGK PFANPRNSAAGSLRQK+PAVTARRRLRMICHGLGHVE G Sbjct 188 FRVADFEDLNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRRLRMICHGLGHVESSGG 247 Query 245 RP-ATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDE 303 P TLH AY AL+AWGLPVS+HT T L V ERI YWGEHRH+V+HEIDGVVVKVD Sbjct 248 SPFPTLHDAYRALKAWGLPVSDHTAQVTGLDAVTERIAYWGEHRHDVEHEIDGVVVKVDA 307 Query 304 VALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTV 363 VALQRRLG+TSRAPRWA+AYKYPPEEAQT+LLDIRVNVGRTGR+TPFA+M PVKVAGSTV Sbjct 308 VALQRRLGATSRAPRWAVAYKYPPEEAQTRLLDIRVNVGRTGRVTPFAYMEPVKVAGSTV 367 Query 364 GQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGS 423 G ATLHNASE+KRKGVLIGDTVVIRKAGDVIPEVLGPVV+LRDGSEREF+ PT CPECGS Sbjct 368 GLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVFPTHCPECGS 427 Query 424 PLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEG 483 LAP KEGDADIRCPN R CP QLRERVFHVA R DIE LGYEA ALLQ+ VIADEG Sbjct 428 ELAPAKEGDADIRCPNTRSCPAQLRERVFHVAGRGAFDIEGLGYEAATALLQSGVIADEG 487 Query 484 ELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAAR 543 +LF LT DLLRT+LF TKAGELSANGKRLL NL KAKA PLWRVLVALSIRHVGPTAAR Sbjct 488 DLFGLTADDLLRTELFTTKAGELSANGKRLLANLGKAKAQPLWRVLVALSIRHVGPTAAR 547 Query 544 ALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDE 603 ALATEFGSL+AI AS +QLA EGVGPTIAAAV +WF VDWHR IVDKWR AGVRM DE Sbjct 548 ALATEFGSLEAIETASEEQLAGTEGVGPTIAAAVIDWFTVDWHRAIVDKWREAGVRMADE 607 Query 604 RDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKY 663 RD S+ RTL GL+IVVTGSL GFSRD+AKEAI+ARGGKAAGSVSKKT YVVAGD+PGSKY Sbjct 608 RDASIERTLEGLSIVVTGSLAGFSRDEAKEAIIARGGKAAGSVSKKTAYVVAGDAPGSKY 667 Query 664 DKAVELGVPILDEDGFRRLLADGP 687 DKA+ELGVP+LDEDGFRRLLA+GP Sbjct 668 DKAIELGVPVLDEDGFRRLLAEGP 691 >gi|145224827|ref|YP_001135505.1| NAD-dependent DNA ligase LigA [Mycobacterium gilvum PYR-GCK] gi|190359265|sp|A4TDZ8.1|DNLJ_MYCGI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145217313|gb|ABP46717.1| DNA ligase, NAD-dependent [Mycobacterium gilvum PYR-GCK] Length=712 Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust. Identities = 549/684 (81%), Positives = 600/684 (88%), Gaps = 3/684 (0%) Query 7 DQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDS 66 D P++ R WQ LA+EVREHQFRYY+RDAPII+DAEFD+LLRRL+ALE+++PELRTPDS Sbjct 19 DALDPDLRRSWQELADEVREHQFRYYIRDAPIITDAEFDQLLRRLQALEDEYPELRTPDS 78 Query 67 PTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDG 126 PTQLVGGAGFATDF +HLERMLSLDN F +ELAAWA RI E+G A YLCELKIDG Sbjct 79 PTQLVGGAGFATDFTAAEHLERMLSLDNVFDLEELAAWAARIRTEIGADAQYLCELKIDG 138 Query 127 VALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVF 186 VAL+LVYR+GRL RA+TRGDGRTGEDVTLNARTI D+PERL+ +++P+P V+EVRGEVF Sbjct 139 VALALVYRDGRLERAATRGDGRTGEDVTLNARTIEDIPERLSGTNEFPLPTVVEVRGEVF 198 Query 187 FRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVE--GF 244 FR+ DF+ LNA LV EGK PFANPRNSAAGSLRQK+PAVTARRRLRMICHGLGHVE G Sbjct 199 FRVADFEDLNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRRLRMICHGLGHVESSGG 258 Query 245 RP-ATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDE 303 P TLH AY AL+AWGLPVS+HT T L V ERI YWGEHRH+V+HEIDGVVVKVD Sbjct 259 SPFPTLHDAYRALKAWGLPVSDHTAQVTGLDAVTERIAYWGEHRHDVEHEIDGVVVKVDA 318 Query 304 VALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTV 363 VALQRRLG+TSRAPRWA+AYKYPPEEAQT+LLDIRVNVGRTGR+TPFA+M PVKVAGSTV Sbjct 319 VALQRRLGATSRAPRWAVAYKYPPEEAQTRLLDIRVNVGRTGRVTPFAYMEPVKVAGSTV 378 Query 364 GQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGS 423 G ATLHNASE+KRKGVLIGDTVVIRKAGDVIPEVLGPVV+LRDGSEREF+ PT CPECGS Sbjct 379 GLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVFPTHCPECGS 438 Query 424 PLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEG 483 LAP KEGDADIRCPN R CP QLRERVFHVA R DIE LGYEA ALLQA VIADEG Sbjct 439 ELAPAKEGDADIRCPNTRSCPAQLRERVFHVAGRGAFDIEGLGYEAATALLQAGVIADEG 498 Query 484 ELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAAR 543 +LF LT DLLRT+LF TKAGELSANGKRLL NL KAKA PLWRVLVALSIRHVGPTAAR Sbjct 499 DLFGLTADDLLRTELFTTKAGELSANGKRLLANLGKAKAQPLWRVLVALSIRHVGPTAAR 558 Query 544 ALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDE 603 ALATEFGSL+AI AS +QLA EGVGPTIAAAV +WF VDWHR IVDKWR AGVRM DE Sbjct 559 ALATEFGSLEAIETASEEQLAGTEGVGPTIAAAVIDWFTVDWHRAIVDKWREAGVRMADE 618 Query 604 RDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKY 663 RD S+ RTL GL+IVVTGSL GFSRD+AKEAI+ARGGKAAGSVSKKT YVVAGD+PGSKY Sbjct 619 RDASIERTLEGLSIVVTGSLAGFSRDEAKEAIIARGGKAAGSVSKKTAYVVAGDAPGSKY 678 Query 664 DKAVELGVPILDEDGFRRLLADGP 687 DKA+ELGVP+LDEDGFRRLLA+GP Sbjct 679 DKAIELGVPVLDEDGFRRLLAEGP 702 >gi|254776288|ref|ZP_05217804.1| NAD-dependent DNA ligase LigA [Mycobacterium avium subsp. avium ATCC 25291] Length=681 Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/673 (83%), Positives = 598/673 (89%), Gaps = 0/673 (0%) Query 15 RQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVGGA 74 RQWQ LAE VREHQFRYY++DAPIISDAEFD L L ALEE+HPELR DSPTQLVGGA Sbjct 3 RQWQELAETVREHQFRYYIKDAPIISDAEFDALFNELLALEERHPELRVADSPTQLVGGA 62 Query 75 GFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLVYR 134 GFATDF HLERMLSLD+ F DEL AW+ R+ E+G HYLCELKIDGVALSLVYR Sbjct 63 GFATDFAEAAHLERMLSLDDVFDTDELIAWSNRVENEIGKDPHYLCELKIDGVALSLVYR 122 Query 135 EGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDFQA 194 +GRL RA+TRGDGR GEDVTLNARTI DVPERL+P DD+PVP +LEVRGEVFF L DF+A Sbjct 123 DGRLERAATRGDGRVGEDVTLNARTIDDVPERLSPSDDFPVPALLEVRGEVFFLLADFEA 182 Query 195 LNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYL 254 LNASLVE+GKAPFANPRNSAAGSLRQK+PAVTARR+LRMICHG+G EGF P T H+AY Sbjct 183 LNASLVEDGKAPFANPRNSAAGSLRQKNPAVTARRKLRMICHGIGRTEGFSPKTQHEAYT 242 Query 255 ALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTS 314 AL WGLPV+E T LA V+ERI YWGEHR+E+ HEIDGVVVKVD+VALQRRLG+TS Sbjct 243 ALSVWGLPVAEQTARVRGLAAVQERIGYWGEHRYELQHEIDGVVVKVDDVALQRRLGATS 302 Query 315 RAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASEI 374 RAPRWA+AYKYPP+EAQTKLLDIRVNVGRTGR+TPFAFMTPVKVAGSTVG ATLHNA+E+ Sbjct 303 RAPRWAVAYKYPPQEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAGSTVGLATLHNAAEV 362 Query 375 KRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDAD 434 KRKGVLIGDTV+IRKAGDVIPEVLGPVV+LRDG+EREF+MPTTCPECG+PLAP KEGDAD Sbjct 363 KRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDGTEREFVMPTTCPECGTPLAPAKEGDAD 422 Query 435 IRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERDLL 494 IRCPNAR CP QLRERVFHVA R LDIE LGYEA ALL A VIADEG+LFALTE DLL Sbjct 423 IRCPNARSCPAQLRERVFHVAGRGALDIEGLGYEAATALLTAGVIADEGDLFALTEDDLL 482 Query 495 RTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLDA 554 RT+LFRTKAG LSANG RLL NL KAK LWRVLVALSIRHVGPTAARALATEFG LD+ Sbjct 483 RTELFRTKAGTLSANGTRLLQNLQKAKKVALWRVLVALSIRHVGPTAARALATEFGDLDS 542 Query 555 IAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLAG 614 I +AST++LAAVEGVGPTIAAA+TEWF VDWHR IVDKWRAAGVRM DERD SVPRTL G Sbjct 543 IMSASTERLAAVEGVGPTIAAALTEWFTVDWHRAIVDKWRAAGVRMADERDASVPRTLEG 602 Query 615 LTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPIL 674 LT+VVTGSL GFSRDDAKEAI+ARGGKAAGSVSKKT+YVVAGDSPGSKYDKAVELGVPIL Sbjct 603 LTVVVTGSLAGFSRDDAKEAILARGGKAAGSVSKKTDYVVAGDSPGSKYDKAVELGVPIL 662 Query 675 DEDGFRRLLADGP 687 DEDGFR+LLA+GP Sbjct 663 DEDGFRKLLAEGP 675 >gi|118470314|ref|YP_886705.1| NAD-dependent DNA ligase LigA [Mycobacterium smegmatis str. MC2 155] gi|166216211|sp|A0QUW7.1|DNLJ_MYCS2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118171601|gb|ABK72497.1| DNA ligase, NAD-dependent [Mycobacterium smegmatis str. MC2 155] Length=701 Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust. Identities = 553/684 (81%), Positives = 604/684 (89%), Gaps = 5/684 (0%) Query 4 PDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRT 63 PDAD+ R+WQ LA+EVREHQFRYYV+DAPIISDAEFD+LLR L+ALE+ HPELRT Sbjct 17 PDADER-----RRWQELADEVREHQFRYYVKDAPIISDAEFDKLLRELQALEDAHPELRT 71 Query 64 PDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELK 123 PDSPTQLVGGAGFAT+F P +HLERMLSLDN F +DEL AWA RI +E GDAAH+LCELK Sbjct 72 PDSPTQLVGGAGFATEFAPAEHLERMLSLDNVFDSDELTAWAARISSETGDAAHFLCELK 131 Query 124 IDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRG 183 IDGVALSLVYR+GRL R +TRGDGRTGEDVTLNARTI D+PERLTP D++PVP VLEVRG Sbjct 132 IDGVALSLVYRDGRLERGATRGDGRTGEDVTLNARTIDDIPERLTPSDEFPVPAVLEVRG 191 Query 184 EVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEG 243 EVFFR+ DF+ LNA LV EGK PFANPRNSAAGSLRQK+PAVTARR+LRMICHG+G+ EG Sbjct 192 EVFFRVADFEELNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRKLRMICHGIGYTEG 251 Query 244 FRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDE 303 F PA+LH AY AL AWGLPVSEHTT + +A V ERI YWGEHRH+V+HEIDGVVVKVDE Sbjct 252 FTPASLHDAYRALGAWGLPVSEHTTKVSTVAEVAERIAYWGEHRHDVEHEIDGVVVKVDE 311 Query 304 VALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTV 363 VALQRRLG+TSRAPRWA+AYKYPPEEA TKLLDIRVNVGRTGR+TPFA+M PVKVAGSTV Sbjct 312 VALQRRLGATSRAPRWAVAYKYPPEEATTKLLDIRVNVGRTGRVTPFAYMEPVKVAGSTV 371 Query 364 GQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGS 423 G ATLHNASE+KRKGVLIGDTVVIRKAGDVIPEVLGPVV+LRDG+EREF PT CPECG+ Sbjct 372 GLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGTEREFEFPTHCPECGT 431 Query 424 PLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEG 483 LAP KEGDADIRCPN+R CP QLRER+FH+A R DIE LGYEA ALL A+VI DEG Sbjct 432 ELAPAKEGDADIRCPNSRSCPAQLRERLFHLAGRGAFDIEGLGYEAATALLAAQVIPDEG 491 Query 484 ELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAAR 543 +LF LT DLLRT+LF TK GELSANGKRLL NL KAK PLWRVLVALSIRHVGPTAAR Sbjct 492 DLFTLTADDLLRTELFTTKKGELSANGKRLLANLTKAKEQPLWRVLVALSIRHVGPTAAR 551 Query 544 ALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDE 603 ALATEFGSL+AI AAS ++LAAVEGVGPTIAAAV +WF VDWHR IVDKWRAAGVRM DE Sbjct 552 ALATEFGSLEAIEAASEEELAAVEGVGPTIAAAVKDWFTVDWHRAIVDKWRAAGVRMADE 611 Query 604 RDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKY 663 RD S+ RTL GL+IVVTGSL GFSRD AKEAI+ARGGKAAGSVSKKT YVVAGD+PGSKY Sbjct 612 RDASIERTLEGLSIVVTGSLAGFSRDQAKEAIIARGGKAAGSVSKKTAYVVAGDAPGSKY 671 Query 664 DKAVELGVPILDEDGFRRLLADGP 687 DKAVELGVP+LDEDGFRRLL GP Sbjct 672 DKAVELGVPVLDEDGFRRLLEQGP 695 >gi|333991377|ref|YP_004523991.1| NAD-dependent DNA ligase LigA [Mycobacterium sp. JDM601] gi|333487345|gb|AEF36737.1| NAD-dependent DNA ligase LigA [Mycobacterium sp. JDM601] Length=693 Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust. Identities = 533/686 (78%), Positives = 595/686 (87%), Gaps = 0/686 (0%) Query 3 SPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELR 62 SP+AD +P++ RQW LAEEVREHQFRYY++DAPII+DAEFD+L RL ALE+++PELR Sbjct 2 SPEADSVSPDIRRQWYELAEEVREHQFRYYIKDAPIITDAEFDDLFNRLLALEDRYPELR 61 Query 63 TPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCEL 122 T DSPTQLVGGAGF TDF P +HLERMLSL++ F+ DEL AWAGR+ E+G YLCEL Sbjct 62 TADSPTQLVGGAGFTTDFTPAEHLERMLSLEDVFSPDELTAWAGRVAGEIGGDTTYLCEL 121 Query 123 KIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVR 182 K+DGVAL LVYR GRL +TRGDGR GEDVTLNARTIAD+PE LTP ++P+P VLEVR Sbjct 122 KVDGVALGLVYRGGRLVSGATRGDGRVGEDVTLNARTIADIPEFLTPDGEFPIPAVLEVR 181 Query 183 GEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVE 242 GEV+FRL+DF+ LNA LV EGK PFANPRNSAAGSLRQK+PAVTARR LRM+CHGLG+ E Sbjct 182 GEVYFRLEDFETLNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRNLRMVCHGLGYSE 241 Query 243 GFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVD 302 GF P TLH+AY A++AWGLPVS HT +A V ERI YWGEHRH+V+HEIDGVVVKVD Sbjct 242 GFNPDTLHEAYTAMKAWGLPVSAHTARVEGMAAVAERITYWGEHRHDVEHEIDGVVVKVD 301 Query 303 EVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGST 362 + ALQRRLG+TSR PRWA+AYKYPPEEAQT L+DIRV+VGRTGR+TPFA+MTPVKVAGST Sbjct 302 DRALQRRLGATSRVPRWAVAYKYPPEEAQTTLVDIRVSVGRTGRVTPFAYMTPVKVAGST 361 Query 363 VGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECG 422 VG ATLHNASE+KRKGVLIGDTV+IRKAGDVIPEVLGPVV+LRDGSEREF+MPT CPECG Sbjct 362 VGLATLHNASEVKRKGVLIGDTVIIRKAGDVIPEVLGPVVDLRDGSEREFVMPTQCPECG 421 Query 423 SPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADE 482 + LAP KE D DIRCPNAR CP QLRERVFHVA R DIE LGYEA ALL A VI DE Sbjct 422 TLLAPAKEADVDIRCPNARSCPAQLRERVFHVAGRGAFDIEALGYEAATALLGAGVITDE 481 Query 483 GELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAA 542 G+LF LTE DLLRT+LF T+ G LS NG++LL NLDKAK+ PLWRVLVALSIRHVGPTAA Sbjct 482 GDLFTLTEDDLLRTELFTTQKGVLSKNGRQLLTNLDKAKSQPLWRVLVALSIRHVGPTAA 541 Query 543 RALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVD 602 RALATEFGSLDAI AST+QLAAVEGVGPTIA AVTEWF VDWHR IVDKWRAAGVRM D Sbjct 542 RALATEFGSLDAITTASTEQLAAVEGVGPTIATAVTEWFDVDWHRAIVDKWRAAGVRMAD 601 Query 603 ERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSK 662 ERD S+ RTL GL+IVVTGSL GFSRD+AKEAI+ARGG+AAGSVSKKT YVVAGD+PGSK Sbjct 602 ERDASIQRTLEGLSIVVTGSLAGFSRDEAKEAIIARGGRAAGSVSKKTAYVVAGDAPGSK 661 Query 663 YDKAVELGVPILDEDGFRRLLADGPA 688 YDKAVELGVPILDE GF +LLA+GPA Sbjct 662 YDKAVELGVPILDEAGFVKLLAEGPA 687 >gi|342858159|ref|ZP_08714814.1| NAD-dependent DNA ligase LigA [Mycobacterium colombiense CECT 3035] gi|342133863|gb|EGT87043.1| NAD-dependent DNA ligase LigA [Mycobacterium colombiense CECT 3035] Length=693 Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 546/688 (80%), Positives = 603/688 (88%), Gaps = 0/688 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +S+ +AD +PEV RQWQ LAEEVREHQFRYY++DAPIISDA+FD + L ALEE+HPE Sbjct 1 MSAAEADSVSPEVRRQWQDLAEEVREHQFRYYIKDAPIISDADFDAMFNELLALEERHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LR DSPTQLVGGAGFATDF HLERMLSLD+ F DEL AW R+ EVG HYLC Sbjct 61 LRVADSPTQLVGGAGFATDFAAAQHLERMLSLDDVFDRDELVAWNNRVENEVGTQPHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVAL+LVYR+GRL RA+TRGDGR GEDVTLNARTI DVPERL+ ++P+P +LE Sbjct 121 ELKIDGVALALVYRDGRLERAATRGDGRVGEDVTLNARTIDDVPERLSASKEFPIPALLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGE FF L DF+ALNASLVE+GKAPFANPRNSAAGSLRQK+PAVTARR+LRMICHG+G Sbjct 181 VRGEAFFLLSDFEALNASLVEDGKAPFANPRNSAAGSLRQKNPAVTARRKLRMICHGIGR 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 EGF P T H+AY AL AWGLPV+E T LA V ERI YWGEHR+E+ HEIDGVVVK Sbjct 241 TEGFAPKTQHEAYTALNAWGLPVAEQTARVRGLAAVEERIGYWGEHRYELQHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 VD+VALQRRLG+TSRAPRWA+AYKYPP+EAQTKLLDIRVNVGRTGR+TPFAFMTPVKVAG Sbjct 301 VDDVALQRRLGTTSRAPRWAVAYKYPPQEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVG ATLHNA+E+KRKGVLIGDTV+IRKAGDVIPEVLGPVV+LRDGSEREF+MPT CPE Sbjct 361 STVGLATLHNAAEVKRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDGSEREFVMPTACPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 CG+ LAP KEGDADIRCPNAR CP QLRERVFHVA R DIE LGYEA +ALL+A VIA Sbjct 421 CGTTLAPAKEGDADIRCPNARSCPAQLRERVFHVAGRGAFDIEGLGYEAAIALLKAGVIA 480 Query 481 DEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPT 540 DEG+LF LTE DLLRT+LFRTKAG LSANGKRLL NLDKAK LWRVLVALSIRHVGPT Sbjct 481 DEGDLFTLTEDDLLRTELFRTKAGALSANGKRLLDNLDKAKKVALWRVLVALSIRHVGPT 540 Query 541 AARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRM 600 AARALATEFG LD+I +AST++LAAVEGVGPTIAAA+TEWF VDWH IV+KWR AGVRM Sbjct 541 AARALATEFGDLDSIMSASTERLAAVEGVGPTIAAALTEWFTVDWHCAIVEKWRKAGVRM 600 Query 601 VDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPG 660 DERD SVPRTL GLT+VVTGSL GFSRDDAKEAI+ARGGKAAGSVSKKT+YVVAGDSPG Sbjct 601 ADERDSSVPRTLEGLTVVVTGSLAGFSRDDAKEAILARGGKAAGSVSKKTDYVVAGDSPG 660 Query 661 SKYDKAVELGVPILDEDGFRRLLADGPA 688 SKYDKA+ELGVP+LDEDGFR+LL +GP+ Sbjct 661 SKYDKAIELGVPVLDEDGFRKLLDEGPS 688 >gi|169630426|ref|YP_001704075.1| NAD-dependent DNA ligase LigA [Mycobacterium abscessus ATCC 19977] gi|254781373|sp|B1MDV2.1|DNLJ_MYCA9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169242393|emb|CAM63421.1| DNA ligase (polydeoxyribonucleotide synthase NAD+) [Mycobacterium abscessus] Length=681 Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 533/676 (79%), Positives = 587/676 (87%), Gaps = 0/676 (0%) Query 12 EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLV 71 ++ RQW LAEEVR HQFRYYV+DAP+ISD +FDELLRRL ALEEQ+PELRTPDSPTQLV Sbjct 4 DIQRQWGELAEEVRGHQFRYYVKDAPVISDGQFDELLRRLTALEEQYPELRTPDSPTQLV 63 Query 72 GGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSL 131 GGAGF T+F VDHLERMLSLDNAF++DEL AW R+ ++G YLCELKIDGVALSL Sbjct 64 GGAGFVTEFRSVDHLERMLSLDNAFSSDELTAWDARVRGDIGQEPEYLCELKIDGVALSL 123 Query 132 VYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDD 191 VY G L R +TRGDGR+GEDVTLNARTI DVPERL + YP+P +LEVRGEVFFRL+D Sbjct 124 VYENGVLVRGATRGDGRSGEDVTLNARTIEDVPERLAKSEKYPIPALLEVRGEVFFRLED 183 Query 192 FQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQ 251 F+ALNASLVEE K PFANPRNSAAGSLRQK+PA+TARRRLRMICHGLG EGF P +LH Sbjct 184 FEALNASLVEESKPPFANPRNSAAGSLRQKNPAITARRRLRMICHGLGRAEGFSPESLHD 243 Query 252 AYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLG 311 AYLAL WGLPVS HTT +A V+ER++YW EHRH+V+HEIDGVVVKVD VALQRRLG Sbjct 244 AYLALGEWGLPVSTHTTKVRGIAKVQERVNYWAEHRHDVEHEIDGVVVKVDTVALQRRLG 303 Query 312 STSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNA 371 STSRAPRWAIAYKYPPEEA T+LLDIRV+VGRTGR+TPFA+MTPVKVAGSTV ATLHNA Sbjct 304 STSRAPRWAIAYKYPPEEATTELLDIRVSVGRTGRVTPFAYMTPVKVAGSTVSLATLHNA 363 Query 372 SEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEG 431 SE+KRKGVLIGDTVVIRKAGDVIPEVLGPV +LR+G+EREF+MPT CPECG+ LA EKEG Sbjct 364 SEVKRKGVLIGDTVVIRKAGDVIPEVLGPVADLRNGNEREFVMPTACPECGTTLAHEKEG 423 Query 432 DADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTER 491 DADIRCPN+R CP QLRERVFHVA R DIE LGYEA +ALL A VI DEG+LF LT Sbjct 424 DADIRCPNSRSCPAQLRERVFHVAGRGAFDIEALGYEAAIALLAAGVIEDEGDLFGLTAD 483 Query 492 DLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGS 551 DLLRTDLF+TK+G LSANG RLL NLDKAK PLWRVLVALSIRHVGPTAARALATEFG Sbjct 484 DLLRTDLFKTKSGALSANGARLLDNLDKAKQQPLWRVLVALSIRHVGPTAARALATEFGD 543 Query 552 LDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRT 611 L+AI AS +QLAAVEGVG TIAAAV +WF+VDWHR IVDKWRAAGVR DERD+S+PR Sbjct 544 LEAIEGASVEQLAAVEGVGATIAAAVVDWFSVDWHRAIVDKWRAAGVRTADERDDSIPRN 603 Query 612 LAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGV 671 L GL+IVVTGSL GFSRD+AKEAI+ARGGK+A SVSKKT +VV GDSPGSKYDKAVELGV Sbjct 604 LEGLSIVVTGSLPGFSRDEAKEAIIARGGKSASSVSKKTAFVVVGDSPGSKYDKAVELGV 663 Query 672 PILDEDGFRRLLADGP 687 ILDEDGFR LLADGP Sbjct 664 TILDEDGFRALLADGP 679 >gi|226365931|ref|YP_002783714.1| NAD-dependent DNA ligase LigA [Rhodococcus opacus B4] gi|254781403|sp|C1B1S4.1|DNLJ_RHOOB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226244421|dbj|BAH54769.1| NAD(+)-dependent DNA ligase [Rhodococcus opacus B4] Length=697 Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust. Identities = 522/690 (76%), Positives = 576/690 (84%), Gaps = 2/690 (0%) Query 3 SPDADQTAPEVLRQ-WQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPEL 61 S +A AP +R+ W LAE+VR+HQFRYYVRDAPIISD EFD LL L LE Q+P+L Sbjct 5 STEAPTPAPGSVREHWNELAEDVRQHQFRYYVRDAPIISDGEFDALLGELNDLENQYPDL 64 Query 62 RTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCE 121 RTPDSPTQLVGG GFATDF DHLERMLSLDN F DEL W R+ E G HYLCE Sbjct 65 RTPDSPTQLVGG-GFATDFASADHLERMLSLDNVFATDELRTWISRVEQETGPDLHYLCE 123 Query 122 LKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEV 181 +KIDGVAL+LVY GRL RA+TRGDGRTGE+VTLNARTI D+PE+LT D YP+P +LEV Sbjct 124 VKIDGVALNLVYENGRLVRAATRGDGRTGEEVTLNARTIDDIPEKLTGTDKYPIPALLEV 183 Query 182 RGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHV 241 RGEVFFRL+DF ALNA+LVEEGKAPFANPRNSAAGSLRQK+PAVTARRRL MICHGLG Sbjct 184 RGEVFFRLEDFAALNAALVEEGKAPFANPRNSAAGSLRQKNPAVTARRRLGMICHGLGRS 243 Query 242 EGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKV 301 EGF PA+ + AY AL AWGLPVS HT T V +R+ YWGEHRH+V+HEIDG+VVKV Sbjct 244 EGFEPASQYDAYTALAAWGLPVSTHTVRVTGADAVVDRVQYWGEHRHDVEHEIDGLVVKV 303 Query 302 DEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGS 361 DE +LQRRLGSTSRAPRWAIAYKYPPEEA TKLLDIRVNVGRTGR+TPFA+M PV VAGS Sbjct 304 DETSLQRRLGSTSRAPRWAIAYKYPPEEATTKLLDIRVNVGRTGRVTPFAYMEPVTVAGS 363 Query 362 TVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPEC 421 TV ATLHN SE+KRKGVLIGDTVV+RKAGDVIPEVLGPVV+ R G E EF+MP CPEC Sbjct 364 TVSLATLHNGSEVKRKGVLIGDTVVLRKAGDVIPEVLGPVVDARTGDEYEFVMPANCPEC 423 Query 422 GSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIAD 481 +PLAP KEGDADIRCPN + CP QLRERVFHVA R DIEVLGYEA +LL+AK I D Sbjct 424 DTPLAPAKEGDADIRCPNQQYCPAQLRERVFHVAGRGAFDIEVLGYEAATSLLEAKAIGD 483 Query 482 EGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTA 541 EG+LF+LTE DLL+T LFRTKAG LSANG+RLL NLD AK PLWRVLVALSIRHVGPTA Sbjct 484 EGDLFSLTEDDLLKTTLFRTKAGGLSANGRRLLDNLDSAKDKPLWRVLVALSIRHVGPTA 543 Query 542 ARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMV 601 ARALA EFGSLD I +S ++LAAV+GVG TIAAAV EWF VDWHR+IVDKW AAGVRM Sbjct 544 ARALAGEFGSLDRIRESSVEELAAVDGVGGTIAAAVAEWFGVDWHRQIVDKWSAAGVRME 603 Query 602 DERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGS 661 DERDES+PR L GL+IVVTGSL FSRD AKEAI+ RGGKAAGSVSKKT +VVAG+SPGS Sbjct 604 DERDESIPRNLEGLSIVVTGSLETFSRDQAKEAILVRGGKAAGSVSKKTAFVVAGESPGS 663 Query 662 KYDKAVELGVPILDEDGFRRLLADGPASRT 691 K+DKAVELGVP+LDEDGFRRLL GP + T Sbjct 664 KHDKAVELGVPVLDEDGFRRLLEGGPDAVT 693 >gi|111023430|ref|YP_706402.1| NAD-dependent DNA ligase LigA [Rhodococcus jostii RHA1] gi|123045472|sp|Q0S2J2.1|DNLJ_RHOSR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110822960|gb|ABG98244.1| DNA ligase (NAD+) [Rhodococcus jostii RHA1] Length=696 Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/686 (76%), Positives = 573/686 (84%), Gaps = 2/686 (0%) Query 3 SPDADQTAPEVLRQ-WQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPEL 61 S +A AP +R+ W LAEEVR+HQFRYYVRDAPIISD EFD LL L LE Q+P+L Sbjct 4 STEAPTPAPGHVREHWNELAEEVRQHQFRYYVRDAPIISDGEFDVLLGELNDLENQYPDL 63 Query 62 RTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCE 121 RTPDSPTQLVGG GF+TDF DHLERMLSLDN F DEL W R+ E G HYLCE Sbjct 64 RTPDSPTQLVGG-GFSTDFASADHLERMLSLDNVFATDELRTWISRVEQETGPDLHYLCE 122 Query 122 LKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEV 181 +KIDGVAL+LVY GRL RA+TRGDGRTGE+VTLNARTI D+PE+LT D+YP+P +LEV Sbjct 123 VKIDGVALNLVYENGRLDRAATRGDGRTGEEVTLNARTIDDIPEKLTGTDEYPIPALLEV 182 Query 182 RGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHV 241 RGEVFFRL+DF ALNA+LVEEGKAPFANPRNSAAGSLRQK+PAVTARRRL MICHGLG Sbjct 183 RGEVFFRLEDFAALNAALVEEGKAPFANPRNSAAGSLRQKNPAVTARRRLGMICHGLGRS 242 Query 242 EGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKV 301 EGF P + + AY AL AWGLPVS HT T V +R+ YWGEHRH+V+HEIDG+VVKV Sbjct 243 EGFEPVSQYDAYTALAAWGLPVSTHTARVTGADAVVDRVQYWGEHRHDVEHEIDGLVVKV 302 Query 302 DEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGS 361 DE +LQRRLGSTSRAPRWAIAYKYPPEEA TKLLDIRVNVGRTGR+TPFA+M PV VAGS Sbjct 303 DETSLQRRLGSTSRAPRWAIAYKYPPEEATTKLLDIRVNVGRTGRVTPFAYMEPVTVAGS 362 Query 362 TVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPEC 421 TV ATLHN SE+KRKGVLIGDTVV+RKAGDVIPEVLGPVV+ R G E EF+MPT CPEC Sbjct 363 TVSLATLHNGSEVKRKGVLIGDTVVLRKAGDVIPEVLGPVVDARTGDEYEFVMPTHCPEC 422 Query 422 GSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIAD 481 +PLAP KEGDADIRCPN + CP QLRERVFHVA R DIEVLGYEA +LL+AK I D Sbjct 423 DTPLAPAKEGDADIRCPNQQYCPAQLRERVFHVAGRGAFDIEVLGYEAATSLLEAKAIGD 482 Query 482 EGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTA 541 EG+LF+LTE DLL+T LFRTKAG LSANG+RLL NLD AK PLWRVLVALSIRHVGPTA Sbjct 483 EGDLFSLTEDDLLKTSLFRTKAGGLSANGRRLLDNLDSAKDKPLWRVLVALSIRHVGPTA 542 Query 542 ARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMV 601 ARALA EFGSL I +S ++LAAV+GVG TIAAAV EWF VDWH++IV+KW AAGVRM Sbjct 543 ARALAGEFGSLARIRESSVEELAAVDGVGGTIAAAVAEWFGVDWHQQIVEKWSAAGVRME 602 Query 602 DERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGS 661 DERDES+PR L GL+IVVTGSL FSRD AKEAI+ RGGKAAGSVSKKT +VV G+SPGS Sbjct 603 DERDESIPRNLEGLSIVVTGSLETFSRDQAKEAILIRGGKAAGSVSKKTAFVVVGESPGS 662 Query 662 KYDKAVELGVPILDEDGFRRLLADGP 687 K+DKAVELGVP+LDEDGFRRLL GP Sbjct 663 KHDKAVELGVPVLDEDGFRRLLEGGP 688 >gi|229493359|ref|ZP_04387148.1| DNA ligase, NAD-dependent [Rhodococcus erythropolis SK121] gi|229319675|gb|EEN85507.1| DNA ligase, NAD-dependent [Rhodococcus erythropolis SK121] Length=700 Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/684 (75%), Positives = 572/684 (84%), Gaps = 2/684 (0%) Query 5 DADQTAP-EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRT 63 DA Q AP E QW LAEEVR+HQFRYYVRDAP+ISD FD LL +L ALEEQ+P+LRT Sbjct 6 DAMQPAPNEAREQWTELAEEVRQHQFRYYVRDAPVISDGAFDTLLGQLNALEEQYPDLRT 65 Query 64 PDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELK 123 PDSPTQLVGG GFATDF VDHLERMLSLDN F EL AW ++ E G HYLCE+K Sbjct 66 PDSPTQLVGG-GFATDFTSVDHLERMLSLDNVFDESELRAWIAKVEQETGPELHYLCEVK 124 Query 124 IDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRG 183 IDGVAL+LVY G+L RA+TRGDGRTGE VTLNA TI D+PERLT D+YP+P +LEVRG Sbjct 125 IDGVALNLVYENGKLVRAATRGDGRTGELVTLNALTINDIPERLTATDEYPIPSLLEVRG 184 Query 184 EVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEG 243 EVFFRL+DF ALNASLVEEGKAPFANPRNSAAGSLRQK+PAVTARRRL MICHG G +EG Sbjct 185 EVFFRLEDFAALNASLVEEGKAPFANPRNSAAGSLRQKNPAVTARRRLGMICHGFGRMEG 244 Query 244 FRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDE 303 F PA+ + AY+AL AWGLPVS HT+ V E++ YWGEHRH+V+HEIDG+VVKVDE Sbjct 245 FEPASQYDAYVALAAWGLPVSTHTSRVVGADAVVEKMKYWGEHRHDVEHEIDGLVVKVDE 304 Query 304 VALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTV 363 ++L RRLG+TSRAPRWAIAYKYPPEE TKLLDIRV+VGRTGR+TPFA+M PV VAGSTV Sbjct 305 MSLHRRLGTTSRAPRWAIAYKYPPEEVTTKLLDIRVSVGRTGRVTPFAYMEPVTVAGSTV 364 Query 364 GQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGS 423 ATLHN SE+KRKGVLIGDTVV+RKAGDVIPEVLGPV ++RDG+EREF+MPT CPECG+ Sbjct 365 SLATLHNGSEVKRKGVLIGDTVVLRKAGDVIPEVLGPVADVRDGTEREFVMPTHCPECGT 424 Query 424 PLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEG 483 LAP KEGD D+RCPN + CP QLRERVFHV+ R DIEVLGYEA LL+AKVI DEG Sbjct 425 LLAPAKEGDVDVRCPNQQYCPAQLRERVFHVSGRGAFDIEVLGYEAATGLLEAKVIGDEG 484 Query 484 ELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAAR 543 +LF+L L+ +FRT AG LSANGKRLL NLD AK PLWRVLVALSIRHVGPTAAR Sbjct 485 DLFSLDAEKLIEVPIFRTNAGSLSANGKRLLANLDSAKDKPLWRVLVALSIRHVGPTAAR 544 Query 544 ALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDE 603 ALA EFGSL I AS D+LAAV+GVG TIAAAV EWF+VDWH++IVDKW +AGVRM DE Sbjct 545 ALAGEFGSLQRIREASVDELAAVDGVGSTIAAAVVEWFSVDWHQQIVDKWASAGVRMEDE 604 Query 604 RDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKY 663 RD+S+PR L GL+IVVTGSL +SRD AKEAI+ RGGKAAGSVSKKT +VV G++PGSK+ Sbjct 605 RDDSIPRNLEGLSIVVTGSLETYSRDQAKEAILVRGGKAAGSVSKKTAFVVVGEAPGSKH 664 Query 664 DKAVELGVPILDEDGFRRLLADGP 687 DKAVELGVP+LDEDGFRRLL DGP Sbjct 665 DKAVELGVPVLDEDGFRRLLEDGP 688 >gi|226305867|ref|YP_002765827.1| NAD(+)-dependent DNA ligase [Rhodococcus erythropolis PR4] gi|254781402|sp|C0ZXK3.1|DNLJ_RHOE4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226184984|dbj|BAH33088.1| NAD(+)-dependent DNA ligase [Rhodococcus erythropolis PR4] Length=700 Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 506/686 (74%), Positives = 572/686 (84%), Gaps = 2/686 (0%) Query 3 SPDADQTAP-EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPEL 61 + DA Q AP E QW LAEEVR+HQFRYYVRDAP+ISD FD LL +L ALEEQ+P+L Sbjct 4 TADAMQPAPNEAREQWTELAEEVRQHQFRYYVRDAPVISDGAFDTLLGQLNALEEQYPDL 63 Query 62 RTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCE 121 RTPDSPTQLVGG GFATDF VDHLERMLSLDN F EL W ++ E G HYLCE Sbjct 64 RTPDSPTQLVGG-GFATDFTSVDHLERMLSLDNVFDESELRGWIAKVEQETGPELHYLCE 122 Query 122 LKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEV 181 +KIDGVAL+LVY G+L RA+TRGDGRTGE VTLNA TI D+PERLT D++P+P +LEV Sbjct 123 VKIDGVALNLVYENGKLVRAATRGDGRTGELVTLNALTINDIPERLTATDEFPIPTLLEV 182 Query 182 RGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHV 241 RGEVFFRL+DF ALNASLVEEGKAPFANPRNSAAGSLRQK+PAVTARRRL MICHG G + Sbjct 183 RGEVFFRLEDFAALNASLVEEGKAPFANPRNSAAGSLRQKNPAVTARRRLGMICHGFGRM 242 Query 242 EGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKV 301 EGF PA+ + AY+AL AWGLPVS HT+ V E++ YWGEHRH+V+HEIDG+VVKV Sbjct 243 EGFEPASQYDAYVALAAWGLPVSTHTSRVVGADAVVEKMKYWGEHRHDVEHEIDGLVVKV 302 Query 302 DEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGS 361 DE++L RRLG+TSRAPRWAIAYKYPPEE TKLLDIRV+VGRTGR+TPFA+M PV VAGS Sbjct 303 DEMSLHRRLGTTSRAPRWAIAYKYPPEEVTTKLLDIRVSVGRTGRVTPFAYMEPVTVAGS 362 Query 362 TVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPEC 421 TV ATLHN SE+KRKGVLIGDTVV+RKAGDVIPEVLGPV ++RDG+EREF+MPT CPEC Sbjct 363 TVSLATLHNGSEVKRKGVLIGDTVVLRKAGDVIPEVLGPVADVRDGTEREFVMPTHCPEC 422 Query 422 GSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIAD 481 G+ LAP KEGD D+RCPN + CP QLRERVFHV+ R DIEVLGYEA LL+AKVI D Sbjct 423 GTLLAPAKEGDVDVRCPNQQHCPAQLRERVFHVSGRGAFDIEVLGYEAATGLLEAKVIGD 482 Query 482 EGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTA 541 EG+LF+L L+ +FRT AG LSANGKRLL NLD AK PLWRVLVALSIRHVGPTA Sbjct 483 EGDLFSLDAEKLIEVPIFRTNAGALSANGKRLLANLDSAKDKPLWRVLVALSIRHVGPTA 542 Query 542 ARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMV 601 ARALA EFGSL I AS D+LAAV+GVG TIAAAV EWF+VDWH++IVDKW +AGVRM Sbjct 543 ARALAGEFGSLQRIREASVDELAAVDGVGSTIAAAVVEWFSVDWHQQIVDKWASAGVRME 602 Query 602 DERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGS 661 DERD+S+PR L GL+IVVTGSL +SRD AKEAI+ RGGKAAGSVSKKT +VV G++PGS Sbjct 603 DERDDSIPRNLEGLSIVVTGSLETYSRDQAKEAILVRGGKAAGSVSKKTAFVVVGEAPGS 662 Query 662 KYDKAVELGVPILDEDGFRRLLADGP 687 K+DKAVELGVP+LDEDGFRRLL DGP Sbjct 663 KHDKAVELGVPVLDEDGFRRLLEDGP 688 >gi|81373659|sp|Q5YRS7.1|DNLJ2_NOCFA RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 gi|54017744|dbj|BAD59114.1| putative DNA ligase [Nocardia farcinica IFM 10152] Length=683 Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 510/674 (76%), Positives = 567/674 (85%), Gaps = 1/674 (0%) Query 16 QWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVGGAG 75 +WQ LAEEVREHQFRYYVRDAPIISD EFD LLR L+ LE++HP+LRTPDSPTQLVGG G Sbjct 2 RWQRLAEEVREHQFRYYVRDAPIISDGEFDALLRELQELEDRHPDLRTPDSPTQLVGG-G 60 Query 76 FATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLVYRE 135 FATDF PVDHLERMLSLDN F DEL AWA R+ AE G HYLCE+KIDGVAL+LVY Sbjct 61 FATDFTPVDHLERMLSLDNVFDVDELRAWAARVEAETGPDLHYLCEVKIDGVALNLVYER 120 Query 136 GRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDFQAL 195 G+L RA+TRGDGRTGEDVTLNARTI DVP L+ G ++PVPE+LEVRGEV+ RL DF+AL Sbjct 121 GKLVRAATRGDGRTGEDVTLNARTIEDVPGELSAGGEFPVPELLEVRGEVYLRLADFEAL 180 Query 196 NASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYLA 255 NA++V EGK P+ANPRN+AAGSLRQKDPAVTARRRLRMICHGLG +EG+ PA+ +AY A Sbjct 181 NAAIVAEGKPPYANPRNTAAGSLRQKDPAVTARRRLRMICHGLGRIEGYTPASQFEAYRA 240 Query 256 LRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSR 315 L AWGLPVSEHT + V ER+ YWGEHRH+++HEIDG V+KVDE +LQRRLG+TSR Sbjct 241 LSAWGLPVSEHTRRVRGIDAVIERVAYWGEHRHDIEHEIDGQVIKVDETSLQRRLGATSR 300 Query 316 APRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASEIK 375 APRWAIAYKYPPEEA TKL I VNVGRTGR+TPFA M PV +AGSTV ATLHNASE+K Sbjct 301 APRWAIAYKYPPEEATTKLRAIEVNVGRTGRVTPFAVMEPVVIAGSTVAMATLHNASEVK 360 Query 376 RKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDADI 435 RKGVLIGDTV IRKAGDVIPEVLGPVV+ R G+EREF+MPT CPECG+ LAPEKEGDADI Sbjct 361 RKGVLIGDTVTIRKAGDVIPEVLGPVVDARTGAEREFVMPTHCPECGTELAPEKEGDADI 420 Query 436 RCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERDLLR 495 RCPN R CP QLRERV+HVA R+ DIE LGYEA + LLQ+ I DEG+LF L E LL Sbjct 421 RCPNQRSCPAQLRERVYHVAGRSAFDIEALGYEAAIDLLQSGAIGDEGDLFDLDEARLLT 480 Query 496 TDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLDAI 555 T LF K G LSANGKRLL NLD AK PLWRVLV LSIRHVGPTAARALA EFGS++ I Sbjct 481 TSLFTNKNGSLSANGKRLLENLDAAKDRPLWRVLVGLSIRHVGPTAARALAAEFGSMERI 540 Query 556 AAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLAGL 615 AS D+LAA +GVGPTIAAAV EWF VDWHR IV KWRAAGVRMVDERDES+ RTL GL Sbjct 541 EQASVDELAATDGVGPTIAAAVAEWFTVDWHRAIVAKWRAAGVRMVDERDESIERTLEGL 600 Query 616 TIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPILD 675 +IVVTGSL GFSRD AKEAI+ARGGKAAGSVSKKT +VV GD+PG+K KA ELGVPILD Sbjct 601 SIVVTGSLQGFSRDGAKEAILARGGKAAGSVSKKTAFVVVGDAPGAKAAKAEELGVPILD 660 Query 676 EDGFRRLLADGPAS 689 E+GF RLLA+GPA+ Sbjct 661 EEGFVRLLAEGPAA 674 >gi|161598439|ref|YP_120478.2| NAD-dependent DNA ligase LigA [Nocardia farcinica IFM 10152] Length=710 Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 510/674 (76%), Positives = 567/674 (85%), Gaps = 1/674 (0%) Query 16 QWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVGGAG 75 +WQ LAEEVREHQFRYYVRDAPIISD EFD LLR L+ LE++HP+LRTPDSPTQLVGG G Sbjct 29 RWQRLAEEVREHQFRYYVRDAPIISDGEFDALLRELQELEDRHPDLRTPDSPTQLVGG-G 87 Query 76 FATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLVYRE 135 FATDF PVDHLERMLSLDN F DEL AWA R+ AE G HYLCE+KIDGVAL+LVY Sbjct 88 FATDFTPVDHLERMLSLDNVFDVDELRAWAARVEAETGPDLHYLCEVKIDGVALNLVYER 147 Query 136 GRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDFQAL 195 G+L RA+TRGDGRTGEDVTLNARTI DVP L+ G ++PVPE+LEVRGEV+ RL DF+AL Sbjct 148 GKLVRAATRGDGRTGEDVTLNARTIEDVPGELSAGGEFPVPELLEVRGEVYLRLADFEAL 207 Query 196 NASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYLA 255 NA++V EGK P+ANPRN+AAGSLRQKDPAVTARRRLRMICHGLG +EG+ PA+ +AY A Sbjct 208 NAAIVAEGKPPYANPRNTAAGSLRQKDPAVTARRRLRMICHGLGRIEGYTPASQFEAYRA 267 Query 256 LRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSR 315 L AWGLPVSEHT + V ER+ YWGEHRH+++HEIDG V+KVDE +LQRRLG+TSR Sbjct 268 LSAWGLPVSEHTRRVRGIDAVIERVAYWGEHRHDIEHEIDGQVIKVDETSLQRRLGATSR 327 Query 316 APRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASEIK 375 APRWAIAYKYPPEEA TKL I VNVGRTGR+TPFA M PV +AGSTV ATLHNASE+K Sbjct 328 APRWAIAYKYPPEEATTKLRAIEVNVGRTGRVTPFAVMEPVVIAGSTVAMATLHNASEVK 387 Query 376 RKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDADI 435 RKGVLIGDTV IRKAGDVIPEVLGPVV+ R G+EREF+MPT CPECG+ LAPEKEGDADI Sbjct 388 RKGVLIGDTVTIRKAGDVIPEVLGPVVDARTGAEREFVMPTHCPECGTELAPEKEGDADI 447 Query 436 RCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERDLLR 495 RCPN R CP QLRERV+HVA R+ DIE LGYEA + LLQ+ I DEG+LF L E LL Sbjct 448 RCPNQRSCPAQLRERVYHVAGRSAFDIEALGYEAAIDLLQSGAIGDEGDLFDLDEARLLT 507 Query 496 TDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLDAI 555 T LF K G LSANGKRLL NLD AK PLWRVLV LSIRHVGPTAARALA EFGS++ I Sbjct 508 TSLFTNKNGSLSANGKRLLENLDAAKDRPLWRVLVGLSIRHVGPTAARALAAEFGSMERI 567 Query 556 AAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLAGL 615 AS D+LAA +GVGPTIAAAV EWF VDWHR IV KWRAAGVRMVDERDES+ RTL GL Sbjct 568 EQASVDELAATDGVGPTIAAAVAEWFTVDWHRAIVAKWRAAGVRMVDERDESIERTLEGL 627 Query 616 TIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPILD 675 +IVVTGSL GFSRD AKEAI+ARGGKAAGSVSKKT +VV GD+PG+K KA ELGVPILD Sbjct 628 SIVVTGSLQGFSRDGAKEAILARGGKAAGSVSKKTAFVVVGDAPGAKAAKAEELGVPILD 687 Query 676 EDGFRRLLADGPAS 689 E+GF RLLA+GPA+ Sbjct 688 EEGFVRLLAEGPAA 701 >gi|289444580|ref|ZP_06434324.1| DNA ligase, NAD-dependent [Mycobacterium tuberculosis T46] gi|289417499|gb|EFD14739.1| DNA ligase, NAD-dependent [Mycobacterium tuberculosis T46] Length=517 Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/517 (99%), Positives = 517/517 (100%), Gaps = 0/517 (0%) Query 175 VPEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMI 234 +PEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMI Sbjct 1 MPEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMI 60 Query 235 CHGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEI 294 CHGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEI Sbjct 61 CHGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEI 120 Query 295 DGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMT 354 DGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMT Sbjct 121 DGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMT 180 Query 355 PVKVAGSTVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIM 414 PVKVAGSTVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIM Sbjct 181 PVKVAGSTVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIM 240 Query 415 PTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALL 474 PTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALL Sbjct 241 PTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALL 300 Query 475 QAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSI 534 QAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSI Sbjct 301 QAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSI 360 Query 535 RHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWR 594 RHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWR Sbjct 361 RHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWR 420 Query 595 AAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVV 654 AAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVV Sbjct 421 AAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVV 480 Query 655 AGDSPGSKYDKAVELGVPILDEDGFRRLLADGPASRT 691 AGDSPGSKYDKAVELGVPILDEDGFRRLLADGPASRT Sbjct 481 AGDSPGSKYDKAVELGVPILDEDGFRRLLADGPASRT 517 >gi|312140511|ref|YP_004007847.1| DNA ligase (nad+) liga [Rhodococcus equi 103S] gi|311889850|emb|CBH49167.1| DNA ligase (NAD+) LigA [Rhodococcus equi 103S] Length=712 Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/699 (74%), Positives = 577/699 (83%), Gaps = 14/699 (2%) Query 2 SSPDAD--QTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHP 59 S PD + + E +WQ LAE VR HQFRYYV D+PI+SD EFD+L L ALEE+HP Sbjct 12 SQPDVEVVPASAEDRERWQELAEVVRNHQFRYYVLDSPIVSDGEFDQLFGELNALEERHP 71 Query 60 ELRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDA---- 115 +LRTPDSPTQLVGG GFAT+F+ VDHLERMLSLDN F DEL W GRI AEV D Sbjct 72 DLRTPDSPTQLVGG-GFATEFKAVDHLERMLSLDNVFDYDELRTWIGRIEAEVSDGRSAG 130 Query 116 -------AHYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLT 168 HYLCE+KIDGVAL+LVY GRL RA+TRGDGRTGEDVTLNARTI+D+PE LT Sbjct 131 SAAAHPDLHYLCEVKIDGVALNLVYENGRLVRAATRGDGRTGEDVTLNARTISDIPETLT 190 Query 169 PGDDYPVPEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTAR 228 P D+YP+P +LEVRGEVFFRL+DF ALNASLV +GKAPFANPRNSAAGSLRQK+PAVTAR Sbjct 191 PSDEYPIPALLEVRGEVFFRLEDFAALNASLVADGKAPFANPRNSAAGSLRQKNPAVTAR 250 Query 229 RRLRMICHGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRH 288 RRL MICHGLG EGF PA + AY AL AWGLPVS HT+ V E++ YW EHRH Sbjct 251 RRLGMICHGLGRTEGFDPAGQYDAYTALAAWGLPVSTHTSRVVGADAVVEKVKYWDEHRH 310 Query 289 EVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRIT 348 +V+HEIDG+VVKVDE++L RRLG+TSRAPRWA+AYKYPPEEA TKL+DIRV+VGRTGR+T Sbjct 311 DVEHEIDGLVVKVDEMSLHRRLGATSRAPRWAVAYKYPPEEATTKLVDIRVSVGRTGRVT 370 Query 349 PFAFMTPVKVAGSTVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGS 408 PFA+M PV VAGSTV ATLHNASE+KRKGVLIGDTVVIRKAG+VIPEVLGPVV++RDGS Sbjct 371 PFAYMEPVLVAGSTVALATLHNASEVKRKGVLIGDTVVIRKAGEVIPEVLGPVVDVRDGS 430 Query 409 EREFIMPTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYE 468 EREF+MPT CPECG+ LAP KEGDADIRCPN R CP QLRERVFHVA R DIEVLGYE Sbjct 431 EREFVMPTECPECGTTLAPAKEGDADIRCPNQRSCPAQLRERVFHVAGRGAFDIEVLGYE 490 Query 469 AGVALLQAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRV 528 A ALLQA VI+DEG+LF+LTE DLL LFRTKAG+LSANG+RLL NL AK PLWRV Sbjct 491 AATALLQAGVISDEGDLFSLTEDDLLEAPLFRTKAGKLSANGRRLLDNLGSAKQQPLWRV 550 Query 529 LVALSIRHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHRE 588 LVALSIRHVGPTAARALA+EFGSL+ I A ++LAAV+GVG TIAAAV WF VDWHR+ Sbjct 551 LVALSIRHVGPTAARALASEFGSLERIENAGVEELAAVDGVGGTIAAAVVAWFEVDWHRD 610 Query 589 IVDKWRAAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSK 648 IV KWRAAGV M DERDES+ R L GL+IVVTGSL GFSRD+AKEAI+ RGGKAAGSVSK Sbjct 611 IVAKWRAAGVTMEDERDESIARNLEGLSIVVTGSLEGFSRDEAKEAILVRGGKAAGSVSK 670 Query 649 KTNYVVAGDSPGSKYDKAVELGVPILDEDGFRRLLADGP 687 KT +VV G++PGSK KA ELGVPILDEDGFRRLL GP Sbjct 671 KTAFVVIGEAPGSKAAKAEELGVPILDEDGFRRLLEHGP 709 >gi|325675870|ref|ZP_08155554.1| DNA ligase [Rhodococcus equi ATCC 33707] gi|325553841|gb|EGD23519.1| DNA ligase [Rhodococcus equi ATCC 33707] Length=711 Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/698 (74%), Positives = 576/698 (83%), Gaps = 13/698 (1%) Query 2 SSPDAD--QTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHP 59 S PD + + E +WQ LAE VR HQFRYYV D+PI+SD EFD+L L ALEE+HP Sbjct 12 SQPDVEVVPASAEDRERWQELAEVVRNHQFRYYVLDSPIVSDGEFDQLFGELNALEERHP 71 Query 60 ELRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDA---- 115 +LRTPDSPTQLVGG GFAT+F+ VDHLERMLSLDN F DEL W GRI AEV D Sbjct 72 DLRTPDSPTQLVGG-GFATEFKAVDHLERMLSLDNVFDYDELRTWIGRIEAEVSDGRSAG 130 Query 116 ------AHYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTP 169 HYLCE+KIDGVAL+LVY GRL RA+TRGDGRTGEDVTLNARTI+D+PE LTP Sbjct 131 SAAHPDLHYLCEVKIDGVALNLVYENGRLVRAATRGDGRTGEDVTLNARTISDIPETLTP 190 Query 170 GDDYPVPEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARR 229 D+YP+P +LEVRGEVFFRL+DF ALNASLV +GKAPFANPRNSAAGSLRQK+PAVTARR Sbjct 191 SDEYPIPALLEVRGEVFFRLEDFAALNASLVADGKAPFANPRNSAAGSLRQKNPAVTARR 250 Query 230 RLRMICHGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHE 289 RL MICHGLG EGF P + AY AL AWGLPVS HT+ V E++ YW EHRH+ Sbjct 251 RLGMICHGLGRTEGFDPVGQYDAYTALAAWGLPVSTHTSRVVGADAVVEKVKYWDEHRHD 310 Query 290 VDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITP 349 V+HEIDG+VVKVDE++L RRLG+TSRAPRWA+AYKYPPEEA TKL+DIRV+VGRTGR+TP Sbjct 311 VEHEIDGLVVKVDEMSLHRRLGATSRAPRWAVAYKYPPEEATTKLVDIRVSVGRTGRVTP 370 Query 350 FAFMTPVKVAGSTVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSE 409 FA+M PV VAGSTV ATLHNASE+KRKGVLIGDTVVIRKAG+VIPEVLGPVV++RDGSE Sbjct 371 FAYMEPVLVAGSTVALATLHNASEVKRKGVLIGDTVVIRKAGEVIPEVLGPVVDVRDGSE 430 Query 410 REFIMPTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEA 469 REF+MPT CPECG+ LAP KEGDADIRCPN R CP QLRERVFHVA R DIEVLGYEA Sbjct 431 REFVMPTECPECGTTLAPAKEGDADIRCPNQRSCPAQLRERVFHVAGRGAFDIEVLGYEA 490 Query 470 GVALLQAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVL 529 ALLQA VI+DEG+LF+LTE DLL LFRTKAG+LSANG+RLL NL AK PLWRVL Sbjct 491 ATALLQAGVISDEGDLFSLTEDDLLEAPLFRTKAGKLSANGRRLLDNLGSAKQQPLWRVL 550 Query 530 VALSIRHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREI 589 VALSIRHVGPTAARALA+EFGSL+ I A ++LAAV+GVG TIAAAV WF VDWHR+I Sbjct 551 VALSIRHVGPTAARALASEFGSLERIENAGVEELAAVDGVGGTIAAAVVAWFEVDWHRDI 610 Query 590 VDKWRAAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKK 649 V KWRAAGV M DERDES+ R L GL+IVVTGSL GFSRD+AKEAI+ RGGKAAGSVSKK Sbjct 611 VAKWRAAGVTMEDERDESIVRNLEGLSIVVTGSLEGFSRDEAKEAILVRGGKAAGSVSKK 670 Query 650 TNYVVAGDSPGSKYDKAVELGVPILDEDGFRRLLADGP 687 T +VV G++PGSK KA ELGVPILDEDGFRRLL GP Sbjct 671 TAFVVIGEAPGSKAAKAEELGVPILDEDGFRRLLEHGP 708 >gi|343926870|ref|ZP_08766363.1| DNA ligase [Gordonia alkanivorans NBRC 16433] gi|343763230|dbj|GAA13289.1| DNA ligase [Gordonia alkanivorans NBRC 16433] Length=694 Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 499/682 (74%), Positives = 574/682 (85%), Gaps = 3/682 (0%) Query 7 DQTAPE--VLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTP 64 +Q+ PE + +W ALAEE+R+HQFRYYV+DAP+I+D EFDELLRRL+ LEE+HPEL TP Sbjct 11 EQSGPEADLREEWAALAEEIRDHQFRYYVKDAPVITDGEFDELLRRLQDLEERHPELATP 70 Query 65 DSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKI 124 DSPT+LVGG GF+T F PVDHLERM+SLDN F +E+ +W R++++ G A +LCELKI Sbjct 71 DSPTKLVGG-GFSTAFSPVDHLERMMSLDNVFDYEEMTSWVERVNSDAGAEAEFLCELKI 129 Query 125 DGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGE 184 DGVAL+LVYR+G L R TRGDGRTGEDV+LNARTI D+P+RLT D+YP+P+VLEVRGE Sbjct 130 DGVALALVYRDGVLERGVTRGDGRTGEDVSLNARTIEDIPQRLTASDEYPIPDVLEVRGE 189 Query 185 VFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGF 244 VFFR +DF+ALNASLV +GK PFANPRNSAAGSLRQK+P VTARR+LRMICHG+GH EG+ Sbjct 190 VFFRGEDFEALNASLVADGKPPFANPRNSAAGSLRQKNPQVTARRKLRMICHGIGHTEGW 249 Query 245 RPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEV 304 RP +LH AYLAL AWGLPVS HTT A+ A + E+I YWGEHRH+V+HEIDG+VVKVD+ Sbjct 250 RPESLHDAYLALGAWGLPVSTHTTKASGAAEILEKISYWGEHRHDVEHEIDGIVVKVDDF 309 Query 305 ALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVG 364 LQRRLGSTSRAPRWAIAYKYPPEEA TKL DI+V VGRTGR+TPFA + PV VAGSTV Sbjct 310 TLQRRLGSTSRAPRWAIAYKYPPEEATTKLRDIQVGVGRTGRVTPFAVLEPVLVAGSTVS 369 Query 365 QATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSP 424 +ATLHN SE+KRKGVLIGDTV IRKAGDVIPEVLGPVV+LRDGSE EF MP CPECG+P Sbjct 370 RATLHNGSEVKRKGVLIGDTVTIRKAGDVIPEVLGPVVDLRDGSEVEFEMPERCPECGTP 429 Query 425 LAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGE 484 L PEKE D D+RCPN CP QLRER+FH+A R DIE LGYEA ALL AKVI +EG+ Sbjct 430 LRPEKESDVDVRCPNQESCPAQLRERLFHLAGRGSFDIEALGYEAATALLSAKVIRNEGD 489 Query 485 LFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARA 544 LF++T DL RTDLF TKAG LSANGKRLL NLDKAK LWRVLV LSIRHVGPTAARA Sbjct 490 LFSITADDLARTDLFTTKAGALSANGKRLLANLDKAKDVALWRVLVGLSIRHVGPTAARA 549 Query 545 LATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDER 604 LATEFGSL+AI +A +QLA VEG+G T+A ++ +WF VDWHREIV+KWRAAGV M DER Sbjct 550 LATEFGSLEAIESADVEQLADVEGLGMTLAQSIHDWFTVDWHREIVEKWRAAGVSMEDER 609 Query 605 DESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYD 664 DES+ RTL G TIVVTGSL FSRD AKEAI+ RGGKA+GSVSKKT+YVV GDSPGSK D Sbjct 610 DESIARTLEGKTIVVTGSLVDFSRDGAKEAILQRGGKASGSVSKKTDYVVVGDSPGSKAD 669 Query 665 KAVELGVPILDEDGFRRLLADG 686 KA +LGVP+LDED F+RLL G Sbjct 670 KAEQLGVPVLDEDAFKRLLETG 691 >gi|262203140|ref|YP_003274348.1| DNA ligase, NAD-dependent [Gordonia bronchialis DSM 43247] gi|262086487|gb|ACY22455.1| DNA ligase, NAD-dependent [Gordonia bronchialis DSM 43247] Length=691 Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust. Identities = 490/684 (72%), Positives = 569/684 (84%), Gaps = 1/684 (0%) Query 3 SPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELR 62 S + + ++ QW LA+E+REHQFRYYV+D+P+I+D EFD LLRRL+ LE+ HPEL Sbjct 4 SSEHQDISADLREQWSTLADEIREHQFRYYVKDSPVITDGEFDALLRRLQDLEDAHPELA 63 Query 63 TPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCEL 122 PDSPT+LVGG GF+T F PVDHLERM+SLDN F DE+ W R++A+ G + +LCEL Sbjct 64 APDSPTKLVGG-GFSTAFTPVDHLERMMSLDNVFDYDEMRTWVERVNADAGTSVEFLCEL 122 Query 123 KIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVR 182 KIDGVAL+LVY +G L R TRGDGRTGEDVTLNARTI DVP+RLT D+YP+P+VLEVR Sbjct 123 KIDGVALALVYEKGVLVRGVTRGDGRTGEDVTLNARTIDDVPQRLTASDEYPIPDVLEVR 182 Query 183 GEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVE 242 GEVFFR++DF+ALNASLV +GKAPFANPRNSAAGSLRQK+P +TARRRLRMICHG+GH E Sbjct 183 GEVFFRVEDFEALNASLVADGKAPFANPRNSAAGSLRQKNPQITARRRLRMICHGIGHTE 242 Query 243 GFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVD 302 G+RPA+LH AYLAL AWGLPVS HTT + E+I YWGEHRH+V+HEIDG+VVK D Sbjct 243 GWRPASLHDAYLALGAWGLPVSTHTTKVPGADEILEKIGYWGEHRHDVEHEIDGIVVKAD 302 Query 303 EVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGST 362 +V++QRRLG+TSRAPRWAIAYKYPPEEA T+LLDI+V VGRTGR+TPFA + PV VAGST Sbjct 303 DVSVQRRLGATSRAPRWAIAYKYPPEEATTELLDIQVGVGRTGRVTPFAVLAPVLVAGST 362 Query 363 VGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECG 422 V +ATLHN SE+KRKGVLIGDTV IRKAGDVIPEVLGPVV+LRDG+ER F+MP CPECG Sbjct 363 VSRATLHNESEVKRKGVLIGDTVTIRKAGDVIPEVLGPVVDLRDGTERAFVMPDRCPECG 422 Query 423 SPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADE 482 +PL PEK+ D DIRCPN CP QLRER+FH+A R DIE LGYEA ALL AKVI +E Sbjct 423 APLRPEKDSDVDIRCPNQETCPAQLRERLFHLAGRGSFDIEALGYEAATALLNAKVITNE 482 Query 483 GELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAA 542 G+LF+LT DL RTDLF TKAG LSANGKRLL NL+ AK PLWRVLV LSIRHVGPTAA Sbjct 483 GDLFSLTADDLARTDLFTTKAGALSANGKRLLANLENAKQVPLWRVLVGLSIRHVGPTAA 542 Query 543 RALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVD 602 RALATEFGSL+AI A +QLA VEG+G T+A ++ +WFAVDWHREIV+KWRAAGV M D Sbjct 543 RALATEFGSLNAIEDADVEQLAGVEGLGMTLAQSIHDWFAVDWHREIVEKWRAAGVSMED 602 Query 603 ERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSK 662 ERD+S+ RTL G TIVVTGSL FSRD AKEAI+ RGGKA+GSVSKKT+YVV G+SPGSK Sbjct 603 ERDDSIVRTLEGKTIVVTGSLEDFSRDGAKEAILQRGGKASGSVSKKTDYVVIGESPGSK 662 Query 663 YDKAVELGVPILDEDGFRRLLADG 686 KA +LGVP+LDED F+RLL G Sbjct 663 AAKAEQLGVPVLDEDAFKRLLETG 686 >gi|333920877|ref|YP_004494458.1| DNA ligase [Amycolicicoccus subflavus DQS3-9A1] gi|333483098|gb|AEF41658.1| DNA ligase [Amycolicicoccus subflavus DQS3-9A1] Length=694 Score = 1013 bits (2619), Expect = 0.0, Method: Compositional matrix adjust. Identities = 507/676 (75%), Positives = 578/676 (86%), Gaps = 1/676 (0%) Query 12 EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLV 71 E +WQ LAE+VR HQFRYYV+DAPIISD EFDELL+RL+ LE+++ +LRTPDSPTQL+ Sbjct 11 EAREEWQRLAEDVRGHQFRYYVKDAPIISDGEFDELLKRLQVLEDKYSDLRTPDSPTQLI 70 Query 72 GGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSL 131 GG GFAT+F P+DHLERMLSLDN F+ DEL W R+ AE G HYLCELKIDGVALSL Sbjct 71 GG-GFATEFAPIDHLERMLSLDNVFSEDELREWTHRVEAEAGTGLHYLCELKIDGVALSL 129 Query 132 VYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDD 191 VY +GRL RA+TRGDGRTGE+VTLNARTI DVPERL+ D+P+P++LEVRGEVFFRL+D Sbjct 130 VYEKGRLVRAATRGDGRTGEEVTLNARTIDDVPERLSTTTDFPIPDLLEVRGEVFFRLED 189 Query 192 FQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQ 251 F ALNA+L EGK PFANPRNSAAGSLRQK+PAVTARR+LRMICHG+G EGF P + ++ Sbjct 190 FAALNAALTGEGKPPFANPRNSAAGSLRQKNPAVTARRKLRMICHGIGKREGFTPQSQYE 249 Query 252 AYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLG 311 AY AL+AWGLPVSEHT + ++ W E RHE++HE+DG+VVKVDEV LQRRLG Sbjct 250 AYQALKAWGLPVSEHTVRVRGADEIVAQVQLWEERRHEIEHEVDGLVVKVDEVTLQRRLG 309 Query 312 STSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNA 371 STSRAPRWA AYKYPPEEA TKLLDIRVNVGRTGR+TPFA+M PV VAGSTV ATLHN Sbjct 310 STSRAPRWATAYKYPPEEATTKLLDIRVNVGRTGRVTPFAYMEPVTVAGSTVSLATLHNG 369 Query 372 SEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEG 431 E+KRKGVLIGDTVVIRKAG+VIPEVLGPVV+LRDG+EREF MP+ CPECG+ LAP KEG Sbjct 370 DEVKRKGVLIGDTVVIRKAGEVIPEVLGPVVDLRDGTEREFAMPSVCPECGAVLAPSKEG 429 Query 432 DADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTER 491 D DIRCPN R CP QLRERVF++ SR LDIE LGYEA ALL +VI DEG+LF LT Sbjct 430 DVDIRCPNQRTCPAQLRERVFYIGSRGALDIEGLGYEAATALLAHQVITDEGDLFTLTSD 489 Query 492 DLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGS 551 DLL+T+LFRTKAG LSANGKRLL +L+K K+ PLWRV+V+LSIRHVGPTAARALATEFGS Sbjct 490 DLLKTELFRTKAGALSANGKRLLEHLEKTKSQPLWRVIVSLSIRHVGPTAARALATEFGS 549 Query 552 LDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRT 611 LDA+AAAS ++LAAV+GVGPTIA AVTEWF VDWHR+IV KW AGVRM DERD S+ RT Sbjct 550 LDAVAAASLEELAAVDGVGPTIAQAVTEWFDVDWHRDIVRKWADAGVRMADERDASIART 609 Query 612 LAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGV 671 L GL+IVVTGSL GFSRD+AKEAI+ RGGKAAGSVSKKT +VV GD+PGSKYDKAV+LGV Sbjct 610 LEGLSIVVTGSLDGFSRDEAKEAILTRGGKAAGSVSKKTAFVVVGDAPGSKYDKAVDLGV 669 Query 672 PILDEDGFRRLLADGP 687 P+LDEDGFR+LLADGP Sbjct 670 PVLDEDGFRKLLADGP 685 >gi|326381521|ref|ZP_08203215.1| NAD-dependent DNA ligase LigA [Gordonia neofelifaecis NRRL B-59395] gi|326199768|gb|EGD56948.1| NAD-dependent DNA ligase LigA [Gordonia neofelifaecis NRRL B-59395] Length=692 Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust. Identities = 491/684 (72%), Positives = 563/684 (83%), Gaps = 6/684 (0%) Query 5 DADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTP 64 +AD + + R+W LAEEVR HQFRYYV+DAP+ISD EFD LLRRL+ALE++HPEL Sbjct 3 EADGSGTDWAREWALLAEEVRGHQFRYYVQDAPVISDGEFDTLLRRLQALEDEHPELAVA 62 Query 65 DSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKI 124 DSPT+LVGG GF+TDF VDHLERM+SLDN F DE+ W R AE+G +LCELKI Sbjct 63 DSPTKLVGG-GFSTDFTSVDHLERMMSLDNVFDHDEMRTWVSRTEAEIGAGTEFLCELKI 121 Query 125 DGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDY--PVPEVLEVR 182 DGVAL+LVY G+L R TRGDGRTGEDVTLNARTI DVP L DD PVP +LEVR Sbjct 122 DGVALALVYENGKLVRGVTRGDGRTGEDVTLNARTITDVPHVL---DDAVRPVPALLEVR 178 Query 183 GEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVE 242 GEVFFR++DFQ LNASLVE+GKAPFANPRNSAAGSLRQK+P +TA+R LRMICHG+G +E Sbjct 179 GEVFFRVEDFQNLNASLVEDGKAPFANPRNSAAGSLRQKNPQITAKRHLRMICHGIGKIE 238 Query 243 GFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVD 302 G+RP +LH AYLAL WGLPVS+HT T + + IDYWGE+RH V+HEIDG+VVKVD Sbjct 239 GWRPESLHDAYLALGEWGLPVSKHTRKVTGAGEIVKTIDYWGENRHSVEHEIDGLVVKVD 298 Query 303 EVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGST 362 +V+ QRRLG+TSRAPRWAIAYKYPPEE TKLLDI V VGRTGR+TP+A M PV VAGST Sbjct 299 DVSQQRRLGATSRAPRWAIAYKYPPEEVTTKLLDIMVGVGRTGRVTPWALMEPVLVAGST 358 Query 363 VGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECG 422 V +ATLHNA E+KRKGVLIGDT+ IRKAGDVIPEVLGPVVELRDG+EREF+MPT CPECG Sbjct 359 VARATLHNAFEVKRKGVLIGDTITIRKAGDVIPEVLGPVVELRDGTEREFVMPTNCPECG 418 Query 423 SPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADE 482 + LAP KEGD DIRCPN R CPGQLRER+F++A R DIE LGYE ALL + V+ADE Sbjct 419 TELAPAKEGDKDIRCPNQRSCPGQLRERLFYLAGRGAFDIEALGYEGAQALLSSGVLADE 478 Query 483 GELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAA 542 G+LF+LT DL++TDL+ TKAG LSANGKR L NLDKAK PLWRV+VALSIRHVGPT A Sbjct 479 GDLFSLTADDLIKTDLYTTKAGALSANGKRFLDNLDKAKHVPLWRVIVALSIRHVGPTPA 538 Query 543 RALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVD 602 RALAT FG L+AI AAS + LA V+G+GPT AA+V +WFAVDWHREIV KWRAAGV M D Sbjct 539 RALATAFGDLEAIQAASVEDLAQVDGLGPTRAASVHDWFAVDWHREIVAKWRAAGVSMAD 598 Query 603 ERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSK 662 ERD+S+ RTL G TIVVTGSL FSRD AKEAI++RGGKA+GSVSKKT+YVV G++ GSK Sbjct 599 ERDDSIERTLEGKTIVVTGSLVDFSRDGAKEAIISRGGKASGSVSKKTDYVVVGEAAGSK 658 Query 663 YDKAVELGVPILDEDGFRRLLADG 686 DKA +LGVPILDEDGF+ LLA G Sbjct 659 ADKAEQLGVPILDEDGFKELLATG 682 >gi|254233094|ref|ZP_04926421.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis C] gi|124602153|gb|EAY61163.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis C] Length=495 Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/495 (99%), Positives = 495/495 (100%), Gaps = 0/495 (0%) Query 197 ASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYLAL 256 +SLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYLAL Sbjct 1 SSLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYLAL 60 Query 257 RAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRA 316 RAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRA Sbjct 61 RAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRA 120 Query 317 PRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASEIKR 376 PRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASEIKR Sbjct 121 PRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASEIKR 180 Query 377 KGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDADIR 436 KGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDADIR Sbjct 181 KGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDADIR 240 Query 437 CPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERDLLRT 496 CPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERDLLRT Sbjct 241 CPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERDLLRT 300 Query 497 DLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLDAIA 556 DLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLDAIA Sbjct 301 DLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLDAIA 360 Query 557 AASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLAGLT 616 AASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLAGLT Sbjct 361 AASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLAGLT 420 Query 617 IVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPILDE 676 IVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPILDE Sbjct 421 IVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPILDE 480 Query 677 DGFRRLLADGPASRT 691 DGFRRLLADGPASRT Sbjct 481 DGFRRLLADGPASRT 495 >gi|296140594|ref|YP_003647837.1| DNA ligase, NAD-dependent [Tsukamurella paurometabola DSM 20162] gi|296028728|gb|ADG79498.1| DNA ligase, NAD-dependent [Tsukamurella paurometabola DSM 20162] Length=688 Score = 976 bits (2524), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/674 (71%), Positives = 549/674 (82%), Gaps = 2/674 (0%) Query 15 RQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVGGA 74 R WQ LAEEVR HQFRYYV+DAP++SD EFD LL+RL+A+E+ PEL PDSPT+LVGG Sbjct 11 RAWQELAEEVRGHQFRYYVQDAPVLSDGEFDALLKRLQAMEDAFPELAVPDSPTKLVGG- 69 Query 75 GFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLVYR 134 GF+T+F VDHLERM SLDN F EL W R+ +VG++ +L ELKIDGVAL+LVY Sbjct 70 GFSTEFTAVDHLERMYSLDNVFDEGELREWIARVQRDVGESVTFLTELKIDGVALNLVYE 129 Query 135 EGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDFQA 194 +G L R +TRGDGRTGEDVTLNART+ DVP RLTP D++P+P VLEVRGEVFFRL DF+ Sbjct 130 DGALVRGATRGDGRTGEDVTLNARTLRDVPHRLTPSDEFPIPAVLEVRGEVFFRLADFEE 189 Query 195 LNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEG-FRPATLHQAY 253 LNA LV EGK PFANPRNSAAGSLRQK+P +T+RR+L MICHGLG +EG + PA+LH+AY Sbjct 190 LNAGLVAEGKPPFANPRNSAAGSLRQKNPQITSRRKLGMICHGLGRIEGGWSPASLHEAY 249 Query 254 LALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGST 313 AL AWGLPVS HT V +R+ YWGEHRH+ +HEIDG+VVKVDE+ALQRRLG+T Sbjct 250 RALAAWGLPVSAHTKQVVGADAVVDRVFYWGEHRHDPEHEIDGLVVKVDEIALQRRLGAT 309 Query 314 SRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASE 373 SRAPRWAIAYKYPPEE TKLLDIRVNVGRTGR+TP+A+M PV VAGSTV ATLHNASE Sbjct 310 SRAPRWAIAYKYPPEEVTTKLLDIRVNVGRTGRVTPYAYMAPVTVAGSTVEFATLHNASE 369 Query 374 IKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDA 433 ++RKGVLIGDTV IRKAGDVIPEVLGPVV+LRDG+E+ F+MP TCPECG+ LAP KEGDA Sbjct 370 VQRKGVLIGDTVTIRKAGDVIPEVLGPVVDLRDGTEKAFVMPVTCPECGAALAPSKEGDA 429 Query 434 DIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERDL 493 DIRCPN CP QLRER+F++A R DIE LGYEA AL + V+ +EG++F+LTE DL Sbjct 430 DIRCPNTETCPAQLRERLFYLAGRTCFDIEGLGYEAATALTASPVLHNEGDVFSLTEADL 489 Query 494 LRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLD 553 + LF G LSAN +RLL NLD AK PLWRVLVALSIRHVGP+AARALA E GSL+ Sbjct 490 TQVPLFTNDGGALSANAQRLLTNLDVAKTKPLWRVLVALSIRHVGPSAARALAQELGSLE 549 Query 554 AIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLA 613 AIAAA DQLA V+GVG IA AV EWF V WHREIV+KWRAAGV M DERD SVPR L Sbjct 550 AIAAADVDQLAEVDGVGRVIAEAVVEWFTVGWHREIVEKWRAAGVTMEDERDASVPRNLE 609 Query 614 GLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPI 673 GL+IVVTGSL FSRD AKEAI+ RGGKAA SVSKKT +VV GD+PGSK DKA +LGVP+ Sbjct 610 GLSIVVTGSLQNFSRDGAKEAILVRGGKAASSVSKKTAFVVVGDAPGSKADKAEQLGVPV 669 Query 674 LDEDGFRRLLADGP 687 LDE GF +LLA+GP Sbjct 670 LDEAGFEKLLAEGP 683 >gi|134102614|ref|YP_001108275.1| NAD-dependent DNA ligase LigA [Saccharopolyspora erythraea NRRL 2338] gi|291004701|ref|ZP_06562674.1| NAD-dependent DNA ligase LigA [Saccharopolyspora erythraea NRRL 2338] gi|166216238|sp|A4FMS5.1|DNLJ_SACEN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|133915237|emb|CAM05350.1| DNA ligase, NAD-dependent [Saccharopolyspora erythraea NRRL 2338] Length=727 Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/674 (71%), Positives = 544/674 (81%), Gaps = 1/674 (0%) Query 13 VLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVG 72 V ++ L E+VR HQFRYYV D+P ISD EFDEL L+ LE HP LR PDSPTQ+VG Sbjct 43 VRERYADLVEQVRAHQFRYYVLDSPTISDGEFDELFTELQTLESDHPALRDPDSPTQVVG 102 Query 73 GAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLV 132 G F+TDF VDHLERMLSLDNAF DEL AW R+ EVG +AHYLCELKIDG+A++L+ Sbjct 103 GT-FSTDFTAVDHLERMLSLDNAFDPDELRAWVERVEREVGSSAHYLCELKIDGLAINLL 161 Query 133 YREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDF 192 YR+G+L RA TRGDGRTGEDVTLN RT+ DVP++LT D+YPVP ++E+RGEVFFR+D+F Sbjct 162 YRDGKLERALTRGDGRTGEDVTLNVRTMDDVPDQLTGTDEYPVPALVEIRGEVFFRVDEF 221 Query 193 QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQA 252 LNASLVE GK PFANPRNSAAGSLRQKDP VT R LRMICHGLG EGF P ++ Sbjct 222 AQLNASLVEAGKPPFANPRNSAAGSLRQKDPRVTKSRPLRMICHGLGKREGFEPKQQSES 281 Query 253 YLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGS 312 Y ALRAWGL VS HT + + + V E IDYWG+HR+ +HEIDGVVVKVDEV+LQRRLG+ Sbjct 282 YAALRAWGLRVSPHTKVLSTVDEVLEHIDYWGKHRNSAEHEIDGVVVKVDEVSLQRRLGA 341 Query 313 TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNAS 372 TSRAPRW+IAYKYPPE+A T+LLDI+V VGRTGR+TP+A M PVKVAGSTV +ATLHNA Sbjct 342 TSRAPRWSIAYKYPPEQATTRLLDIQVAVGRTGRVTPYAVMEPVKVAGSTVARATLHNAD 401 Query 373 EIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGD 432 +++ KGVLIGD VVIRKAGDVIPEVLGPVV++RDGSEREF+MPT CP+CG+ LA +KEGD Sbjct 402 QVRHKGVLIGDRVVIRKAGDVIPEVLGPVVDVRDGSEREFVMPTECPDCGTALAHQKEGD 461 Query 433 ADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERD 492 D+RCPN+ C GQ RER+F +A R DIEVLGYE ALL A V+ DEG+LF L E Sbjct 462 VDLRCPNSHNCIGQRRERLFQLAGRKAFDIEVLGYEGVSALLSAGVVFDEGDLFDLNEEA 521 Query 493 LLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSL 552 LL+T LFRT G LS NG +LL NL+ AK PLWRVLVALSIRHVGP AAR LA EFGSL Sbjct 522 LLKTTLFRTDDGSLSVNGGKLLANLESAKQQPLWRVLVALSIRHVGPIAARVLAREFGSL 581 Query 553 DAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTL 612 D I AS ++LAA EGVGPTIA AV EWF VDWHREIV KW AGVRM DERDES+ R L Sbjct 582 DRIQEASEEELAAGEGVGPTIATAVREWFDVDWHREIVRKWSEAGVRMADERDESIERHL 641 Query 613 AGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVP 672 GL+IVVTGSL GFSRD+AKE I+ARGG+AAGSVSKKT +VV G+SPGSKYDKAV++ VP Sbjct 642 TGLSIVVTGSLEGFSRDEAKELIMARGGRAAGSVSKKTAFVVVGESPGSKYDKAVQMKVP 701 Query 673 ILDEDGFRRLLADG 686 +LDEDGFR LL G Sbjct 702 VLDEDGFRVLLEQG 715 >gi|339295848|gb|AEJ47959.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis CCDC5079] Length=552 Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/474 (99%), Positives = 473/474 (99%), Gaps = 0/474 (0%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE Sbjct 1 MSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC Sbjct 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE Sbjct 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH Sbjct 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK Sbjct 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG Sbjct 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE Sbjct 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALL 474 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVA L Sbjct 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVAAL 474 >gi|302524940|ref|ZP_07277282.1| DNA ligase, NAD-dependent [Streptomyces sp. AA4] gi|302433835|gb|EFL05651.1| DNA ligase, NAD-dependent [Streptomyces sp. AA4] Length=707 Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/686 (69%), Positives = 555/686 (81%), Gaps = 2/686 (0%) Query 2 SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPEL 61 ++ D +V + ALAEE+R HQFRYYV D+PIISD +FD LL L+ +E+++P L Sbjct 3 AAQDVTDVPADVRERHGALAEEIRGHQFRYYVLDSPIISDGQFDALLGDLQKIEDEYPAL 62 Query 62 RTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCE 121 TPDSPTQ VGG F+T+F DHLERMLSLDN FTA+E AW R+ E+G +A YL E Sbjct 63 VTPDSPTQNVGGT-FSTEFTAHDHLERMLSLDNVFTAEEFLAWVERVEKEIG-SAEYLAE 120 Query 122 LKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEV 181 LKIDG+A++L+Y G+LTR TRGDGRTGEDVTLN RT+ VP+RLT D++PVP+++EV Sbjct 121 LKIDGLAINLLYENGKLTRGLTRGDGRTGEDVTLNIRTLDQVPDRLTGTDEFPVPKLVEV 180 Query 182 RGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHV 241 RGEV+FR++DF LNA +VE GK P+ANPRN+AAGSLRQKDP +T RRLR+ICHGLG Sbjct 181 RGEVYFRVEDFLELNAKMVEAGKLPYANPRNTAAGSLRQKDPKITRERRLRLICHGLGKR 240 Query 242 EGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKV 301 +GF P T AY AL AWGLPVS +T + + E I YWGEHRH+ +HEIDGVV+KV Sbjct 241 DGFEPVTQSHAYDALAAWGLPVSPYTRVLRTGKELTEHIAYWGEHRHDAEHEIDGVVIKV 300 Query 302 DEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGS 361 D+VALQRRLG+TSRAPRWAIAYKYPPEEA T LLDI+V VGRTGR+TPFA PVKVAGS Sbjct 301 DQVALQRRLGTTSRAPRWAIAYKYPPEEAITMLLDIQVGVGRTGRVTPFAVTEPVKVAGS 360 Query 362 TVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPEC 421 TV +ATLHN E+KRKGVLIGD +VIRKAG+VIPEVLGPVV+ R G EREF+MPT CPEC Sbjct 361 TVARATLHNQEEVKRKGVLIGDRIVIRKAGEVIPEVLGPVVDARTGDEREFVMPTECPEC 420 Query 422 GSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIAD 481 G+ LA +KEGD DIRCPN++ CP QLRER+FH+A R DIEVLGYEA VALL A+V+AD Sbjct 421 GTKLAYQKEGDKDIRCPNSQFCPAQLRERLFHLAGRGAFDIEVLGYEAAVALLDARVVAD 480 Query 482 EGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTA 541 EG++F L E L +LFRTKAG+LSAN ++LLVNLD AK PLW+V+VALSIRHVGPTA Sbjct 481 EGDVFDLNEESLAEVELFRTKAGDLSANARKLLVNLDSAKDRPLWKVIVALSIRHVGPTA 540 Query 542 ARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMV 601 A+ALA EFGSL I + ++LA V+GVGPTIA AV EWF VDWHREIV+KWR AGVRM Sbjct 541 AQALAREFGSLQRIEDTTEEELADVDGVGPTIAHAVQEWFEVDWHREIVEKWRRAGVRME 600 Query 602 DERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGS 661 +ERDES+PR L GL+IVVTGSL GFSRD+AKEAI+ARGGKAAGSVSKKT++VV GD+PGS Sbjct 601 EERDESIPRNLEGLSIVVTGSLDGFSRDEAKEAIMARGGKAAGSVSKKTSFVVVGDAPGS 660 Query 662 KYDKAVELGVPILDEDGFRRLLADGP 687 KYDKAV+L VP+LDE+GFR LL GP Sbjct 661 KYDKAVQLKVPVLDENGFRALLERGP 686 >gi|257054924|ref|YP_003132756.1| NAD-dependent DNA ligase LigA [Saccharomonospora viridis DSM 43017] gi|256584796|gb|ACU95929.1| DNA ligase, NAD-dependent [Saccharomonospora viridis DSM 43017] Length=731 Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/695 (70%), Positives = 559/695 (81%), Gaps = 10/695 (1%) Query 2 SSPDADQTAP---------EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLE 52 S P+A +T P EV + AL EE+R HQFRYYV DAP ISDAEFD+L+R LE Sbjct 26 SDPEAARTTPVEGIQDVPAEVRERHSALVEEIRGHQFRYYVLDAPTISDAEFDQLMRDLE 85 Query 53 ALEEQHPELRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEV 112 LE +HP L +PDSPTQ VGG F+T+F DHLERMLSLDN F DEL AW R+ EV Sbjct 86 RLEAEHPALVSPDSPTQTVGGT-FSTEFRAHDHLERMLSLDNVFDLDELQAWIDRVEREV 144 Query 113 GDAAHYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDD 172 G + YLCELK+DG+A++LVY GRL R TRGDGRTGEDVTLN RT+ DVPERLT D Sbjct 145 GGSTRYLCELKVDGLAVNLVYENGRLVRGLTRGDGRTGEDVTLNVRTVQDVPERLTATDR 204 Query 173 YPVPEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLR 232 +PVP+V+EVRGEV+FR+++F LNA+LV+ GKAPFANPRN+AAGSLRQKDP VT R LR Sbjct 205 FPVPDVVEVRGEVYFRVEEFADLNAALVKAGKAPFANPRNAAAGSLRQKDPKVTRSRPLR 264 Query 233 MICHGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDH 292 ++CHGLG GF P ++Y AL AWGLPVS ++ + + E I YW EHR++ + Sbjct 265 LVCHGLGKRVGFEPTRQSESYEALAAWGLPVSPYSKVIDSTEELIEYIRYWNEHRYDAAY 324 Query 293 EIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAF 352 EIDGVVVKVD+V+LQRRLG+TSRAPRWA+AYKYPPEEA T LLDIRVNVGRTGR+TP+A Sbjct 325 EIDGVVVKVDDVSLQRRLGTTSRAPRWAVAYKYPPEEANTTLLDIRVNVGRTGRVTPYAV 384 Query 353 MTPVKVAGSTVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREF 412 M PVKVAGSTV ATLHNA E+KRKGVLIGD VVIRKAGDVIPEVLGP+V+LR G+EREF Sbjct 385 MEPVKVAGSTVSMATLHNAEEVKRKGVLIGDRVVIRKAGDVIPEVLGPIVDLRTGTEREF 444 Query 413 IMPTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVA 472 +MPT CPECG+ LA EKEGD DIRCPNAR CP QLRER+FH+A R DIEVLGYEA A Sbjct 445 VMPTHCPECGTQLAYEKEGDVDIRCPNARSCPAQLRERLFHLAGRGAFDIEVLGYEAAGA 504 Query 473 LLQAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVAL 532 LL++ VIADEG++F LTE DL R DLF TK+G+LSANG+RLL NL AK PLW+VLV L Sbjct 505 LLRSGVIADEGDVFDLTEEDLKRVDLFVTKSGQLSANGRRLLDNLAAAKDRPLWKVLVGL 564 Query 533 SIRHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDK 592 SIRHVGPTAA+ALA EFGS+DAI AAS ++LA V+GVGPTIA AV EWFAVDWHRE+V+K Sbjct 565 SIRHVGPTAAQALAREFGSIDAIDAASEERLAEVDGVGPTIAKAVREWFAVDWHREVVEK 624 Query 593 WRAAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNY 652 WR AGVRM ERD SVPR L GL+IVVTG+L FSRD+AKEAI+ARGGKAAGSVSKKT + Sbjct 625 WRRAGVRMEAERDTSVPRNLEGLSIVVTGTLREFSRDEAKEAIMARGGKAAGSVSKKTAF 684 Query 653 VVAGDSPGSKYDKAVELGVPILDEDGFRRLLADGP 687 VV GD+PGSKYDKAV+L +P+LDEDGFR LL GP Sbjct 685 VVVGDAPGSKYDKAVQLKIPVLDEDGFRVLLDQGP 719 >gi|253797891|ref|YP_003030892.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis KZN 1435] gi|253319394|gb|ACT23997.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis KZN 1435] Length=474 Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/474 (99%), Positives = 474/474 (100%), Gaps = 0/474 (0%) Query 218 LRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVR 277 +RQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVR Sbjct 1 MRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVR 60 Query 278 ERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDI 337 ERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDI Sbjct 61 ERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDI 120 Query 338 RVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEV 397 RVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEV Sbjct 121 RVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEV 180 Query 398 LGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASR 457 LGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASR Sbjct 181 LGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASR 240 Query 458 NGLDIEVLGYEAGVALLQAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNL 517 NGLDIEVLGYEAGVALLQAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNL Sbjct 241 NGLDIEVLGYEAGVALLQAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNL 300 Query 518 DKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAV 577 DKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAV Sbjct 301 DKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAV 360 Query 578 TEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVA 637 TEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVA Sbjct 361 TEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVA 420 Query 638 RGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPILDEDGFRRLLADGPASRT 691 RGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPILDEDGFRRLLADGPASRT Sbjct 421 RGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPILDEDGFRRLLADGPASRT 474 >gi|300783591|ref|YP_003763882.1| DNA ligase (NAD+) [Amycolatopsis mediterranei U32] gi|299793105|gb|ADJ43480.1| DNA ligase (NAD+) [Amycolatopsis mediterranei U32] gi|340524981|gb|AEK40186.1| NAD-dependent DNA ligase LigA [Amycolatopsis mediterranei S699] Length=726 Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/676 (69%), Positives = 539/676 (80%), Gaps = 2/676 (0%) Query 12 EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLV 71 +V + ALAEE+R+HQFRYYV D+PIISD +FDELL L+ LE+ HP L TP+SPTQ V Sbjct 29 DVRERHSALAEELRDHQFRYYVLDSPIISDGQFDELLGELQRLEDAHPALVTPESPTQRV 88 Query 72 GGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSL 131 GG F+T+F DHLERMLSLDN F DE AW R+ EVG +L ELKIDG+A++L Sbjct 89 GGT-FSTEFTAHDHLERMLSLDNVFAEDEFLAWVERVEKEVG-RTEFLAELKIDGLAINL 146 Query 132 VYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDD 191 +Y G LTRA TRGDGRTGEDVTLN RT+ VP+ LT D +PVP ++EVRGEVFFR++D Sbjct 147 LYENGHLTRALTRGDGRTGEDVTLNVRTLDQVPQTLTGTDQFPVPALVEVRGEVFFRVED 206 Query 192 FQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQ 251 F LNA +VE GK P+ANPRN+AAGSLRQKDP +T RRLR+ICHGLG GF P + Sbjct 207 FLELNAKMVEAGKPPYANPRNTAAGSLRQKDPKITRERRLRLICHGLGKRAGFEPQRQSE 266 Query 252 AYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLG 311 AY AL AWGLPVS H+ + T + I YWGEHRH+ +HEIDGVV+KVD+VALQRRLG Sbjct 267 AYDALAAWGLPVSPHSKVLTSADELTAHIAYWGEHRHDAEHEIDGVVIKVDQVALQRRLG 326 Query 312 STSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNA 371 +TSRAPRWAIAYKYPPEEA T LLDI+V VGRTGR+TPFA PV VAGSTV +ATLHN Sbjct 327 TTSRAPRWAIAYKYPPEEAITTLLDIQVGVGRTGRVTPFAVTEPVTVAGSTVSRATLHNQ 386 Query 372 SEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEG 431 E+KRKGVLIGD +VIRKAGDVIPEVLGPVV+ R G EREF+MPT CPECG+ LA +KEG Sbjct 387 EEVKRKGVLIGDRIVIRKAGDVIPEVLGPVVDARTGDEREFVMPTHCPECGTELAYQKEG 446 Query 432 DADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTER 491 D DIRCPN R CP QLRER+FH+A R DIEVLGYEA VALL A+V+ADEG++F L E Sbjct 447 DKDIRCPNTRFCPAQLRERLFHLAGRGAFDIEVLGYEAAVALLDARVVADEGDVFDLNED 506 Query 492 DLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGS 551 L +LFRTKAGELSAN ++LL NLD AK PLW+VLVALSIRHVGPTAA+ALA EFGS Sbjct 507 SLAEVELFRTKAGELSANARKLLSNLDAAKDRPLWKVLVALSIRHVGPTAAQALAREFGS 566 Query 552 LDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRT 611 ++ I A+ ++L+AV+GVGPTIA A EWF V WHREIV+KWR AGVRM + RDES+PR Sbjct 567 IERIEQATEEELSAVDGVGPTIAHATQEWFDVAWHREIVEKWRRAGVRMEEARDESIPRH 626 Query 612 LAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGV 671 L GL+IVVTGSL GFSRD+AKE ++ARGGKAAGSVSKKT +VV GDSPGSKYDKAV+L V Sbjct 627 LEGLSIVVTGSLDGFSRDEAKEVVMARGGKAAGSVSKKTAFVVVGDSPGSKYDKAVQLKV 686 Query 672 PILDEDGFRRLLADGP 687 P+LDE GFR LL GP Sbjct 687 PVLDEAGFRVLLEQGP 702 >gi|319951546|ref|ZP_08025350.1| NAD-dependent DNA ligase LigA [Dietzia cinnamea P4] gi|319434794|gb|EFV90110.1| NAD-dependent DNA ligase LigA [Dietzia cinnamea P4] Length=726 Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/696 (69%), Positives = 546/696 (79%), Gaps = 19/696 (2%) Query 11 PEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQL 70 PE+ ++W LAE VR+HQFRYYV+DAPI+SDAEFD L L+ALEE++P LRT DSPTQL Sbjct 18 PEIRQEWTELAETVRDHQFRYYVKDAPIVSDAEFDRLFGELQALEEKYPALRTADSPTQL 77 Query 71 VGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVG---DAAHYLCELKIDGV 127 VGG GF+TDF PV+HLERM SLDN F+ +EL W + G D +LCE+KIDGV Sbjct 78 VGG-GFSTDFAPVEHLERMTSLDNVFSEEELRDWVASAVEQAGVPEDRLPFLCEVKIDGV 136 Query 128 ALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFF 187 AL LVYR+G+L A+TRGDGRTGEDVTLNARTI D+P LTP D PVP +LEVRGEVFF Sbjct 137 ALDLVYRDGKLVSAATRGDGRTGEDVTLNARTIEDIPVTLTPTPDRPVPSLLEVRGEVFF 196 Query 188 RLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPA 247 RL+DF LNA LV EGKAPFANPRNSAAGSLRQK+PA+TA+RRL M CHGLG VEG Sbjct 197 RLEDFAELNARLVAEGKAPFANPRNSAAGSLRQKNPAITAQRRLGMYCHGLGAVEGATFE 256 Query 248 TLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQ 307 +LH YLAL WGLPVS HT AT + V ER+ YWGEHR + +HEIDG+VVK+D+ A+Q Sbjct 257 SLHDVYLALADWGLPVSPHTAPATGVEEVVERMRYWGEHRSDPEHEIDGLVVKIDDRAVQ 316 Query 308 RRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQAT 367 RRLG TSRAPRWAIAYKYPPEE T+LLDIRV+VGRTGR+TPFA+M PV VAGSTV AT Sbjct 317 RRLGQTSRAPRWAIAYKYPPEEVMTELLDIRVSVGRTGRVTPFAYMEPVLVAGSTVSLAT 376 Query 368 LHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAP 427 LHN +E+ RKGVLIGDTVVIRKAGDVIPEVLGPVVE RDG+EREF+ P CPEC + LAP Sbjct 377 LHNQTEVIRKGVLIGDTVVIRKAGDVIPEVLGPVVERRDGTEREFVFPERCPECDTVLAP 436 Query 428 EKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFA 487 +EGDAD RCPN R CP QLRER+F++ASRN LDIE LGYE LL + V+ +E LF Sbjct 437 AREGDADWRCPNQRSCPAQLRERLFYLASRNALDIEALGYEGASDLLASGVLENEAGLFD 496 Query 488 LTERDLLRTDLF-------RTKAGE--------LSANGKRLLVNLDKAKAAPLWRVLVAL 532 LTE DLLRT L+ R + E L+ NG++LL NL AK PLWRVLVAL Sbjct 497 LTEADLLRTHLYTRIEKATRKQIEEGAEPERVVLTENGRKLLANLATAKDRPLWRVLVAL 556 Query 533 SIRHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDK 592 SIRHVGPTAARALAT FG+++AI AAS +LA +GVG TIAA+V EWF VDWHREIVD+ Sbjct 557 SIRHVGPTAARALATRFGTMEAIRAASDQELAETDGVGQTIAASVVEWFGVDWHREIVDR 616 Query 593 WRAAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNY 652 W AAGV M DERDES+PRTL GLTIV TGSL GF+RD KEAI+ARGGKA+GSVSKKT+Y Sbjct 617 WAAAGVSMADERDESIPRTLEGLTIVATGSLEGFTRDGIKEAIIARGGKASGSVSKKTDY 676 Query 653 VVAGDSPGSKYDKAVELGVPILDEDGFRRLLADGPA 688 VV GD+PGSK KA ELG+ ILDE GF L+ +GPA Sbjct 677 VVVGDNPGSKAAKAEELGLTILDEAGFVELMENGPA 712 >gi|317507336|ref|ZP_07965075.1| DNA ligase [Segniliparus rugosus ATCC BAA-974] gi|316254381|gb|EFV13712.1| DNA ligase [Segniliparus rugosus ATCC BAA-974] Length=712 Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/690 (68%), Positives = 547/690 (80%), Gaps = 7/690 (1%) Query 1 VSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPE 60 +S A T P+ +W LA++V+EHQFRYYV D+P ++DAEFD LLR L+ALE++HPE Sbjct 1 MSEGKAAGTTPQ--ERWLRLADQVKEHQFRYYVLDSPTVTDAEFDALLRELQALEDEHPE 58 Query 61 LRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLC 120 L + SPT+LVGGAGF TDF V H+E MLSLDN F ++ AWA R+ ++ C Sbjct 59 LASASSPTKLVGGAGFTTDFAEVGHVEPMLSLDNVFNEEDFLAWAERVAQGAEQPINFDC 118 Query 121 ELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLE 180 ELKIDG+ +SLVY GRL RA+TRGDGRTGEDVTLN RTIADVP L+ PE+LE Sbjct 119 ELKIDGLGISLVYERGRLARAATRGDGRTGEDVTLNVRTIADVPHELSLAAGEEPPELLE 178 Query 181 VRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGH 240 VRGEVFF+L DF+ALNASLV EGKAPFANPRNSAAGSLRQK+PA+TA+R+L M+CHGLG Sbjct 179 VRGEVFFKLKDFEALNASLVAEGKAPFANPRNSAAGSLRQKNPAITAKRKLAMLCHGLGA 238 Query 241 VEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVK 300 G+ PAT +AY L+ WGLPVS + T V I +WGE RHEV+++IDG+VVK Sbjct 239 TGGWSPATRSEAYQKLKDWGLPVSPYNTTLASPEAVLGHIRHWGERRHEVEYDIDGLVVK 298 Query 301 VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAG 360 V+E++L RLG+TSRAPRWAIAYKYPP+E QTKLLDIRVNVGRTGR+TPFAFM PV VAG Sbjct 299 VEEMSLYARLGNTSRAPRWAIAYKYPPQEVQTKLLDIRVNVGRTGRVTPFAFMEPVLVAG 358 Query 361 STVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPE 420 STVG ATLHNASE+ RKGVLIGDTVV+RKAGDVIPEVLGPVV LRDGSEREF+MP CPE Sbjct 359 STVGLATLHNASEVARKGVLIGDTVVLRKAGDVIPEVLGPVVALRDGSEREFVMPAQCPE 418 Query 421 CGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIA 480 CG+ LAP KE D DIRCPNAR CP QLRERVFHVA R DIE LGYEA V LL+ I Sbjct 419 CGAELAPAKEADVDIRCPNARTCPAQLRERVFHVAGRGAFDIEALGYEAAVDLLKHNAIE 478 Query 481 DEGELFALTERDLLRTDLFRT----KAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRH 536 DEG+LF L E LL+T+LF AG+LSANG++LL NL++AK+ LWRVLVALSIRH Sbjct 479 DEGDLFDLDEERLLKTELFVNTSGKNAGQLSANGRKLLQNLEQAKSRDLWRVLVALSIRH 538 Query 537 VGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAA 596 VGPTAARALAT FGS+DA+ A + LA V+GVGPTIAA+V EWF VDWHR IV++WRAA Sbjct 539 VGPTAARALATRFGSVDAVFGADQEALAEVDGVGPTIAASVREWFEVDWHRSIVERWRAA 598 Query 597 GVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAG 656 GV M ++R++S P+TLAGLTIVVTGSL GF+R+ +EAI+A GGKA+GSVSKKT+YVVAG Sbjct 599 GVTMAEDREQS-PQTLAGLTIVVTGSLDGFTRESVQEAIIAHGGKASGSVSKKTSYVVAG 657 Query 657 DSPGSKYDKAVELGVPILDEDGFRRLLADG 686 + GSK DKA +LGVPI+DE F +LLA+G Sbjct 658 EGGGSKRDKAEQLGVPIIDEAAFVQLLANG 687 >gi|152965283|ref|YP_001361067.1| DNA ligase, NAD-dependent [Kineococcus radiotolerans SRS30216] gi|190359261|sp|A6W7L4.1|DNLJ_KINRD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|151359800|gb|ABS02803.1| DNA ligase, NAD-dependent [Kineococcus radiotolerans SRS30216] Length=696 Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/683 (68%), Positives = 531/683 (78%), Gaps = 4/683 (0%) Query 5 DADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTP 64 D E +W+ L ++ +F YYVR++ +SD ++D L R L ALEEQHP+LRTP Sbjct 5 DGGDVPSEARHRWEDLVAQIEAARFAYYVRNSSPLSDGQYDALERELRALEEQHPQLRTP 64 Query 65 DSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKI 124 DSPTQ VGG F+T+F VDH ERMLSLDNAF+ DEL+AWA R+ EVG A YLCE KI Sbjct 65 DSPTQTVGGT-FSTEFTTVDHPERMLSLDNAFSTDELSAWAARVEREVGAGARYLCEPKI 123 Query 125 DGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGE 184 DG+A+ LVY +GRL R TRGDGRTGEDVT N RT+ DVP RLT D VPE LEVRGE Sbjct 124 DGLAIDLVYEDGRLVRGVTRGDGRTGEDVTFNVRTVEDVPHRLTGAD---VPEFLEVRGE 180 Query 185 VFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGF 244 VFF LD F A+NA LVE GK PFANPRN+AAGSLRQKDP VTA R LRM+ HG+G G Sbjct 181 VFFHLDGFAAINAGLVEAGKPPFANPRNAAAGSLRQKDPRVTATRPLRMLVHGVGARRGM 240 Query 245 RPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEV 304 T AY L AWGLP S + L V E + ++GEHRH+V+HEIDGVVVKVD+V Sbjct 241 ENDTQSGAYEKLAAWGLPTSPRVKVVDTLDEVAEYVRFYGEHRHDVEHEIDGVVVKVDQV 300 Query 305 ALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVG 364 LQRRLGSTSRAPRWAIAYKYPPEE T LLDI+VNVGRTGR+TPFA + PVKVAGSTV Sbjct 301 PLQRRLGSTSRAPRWAIAYKYPPEEVTTSLLDIQVNVGRTGRVTPFAVLEPVKVAGSTVA 360 Query 365 QATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSP 424 ATLHNASE+ RKGVLIGDTVV+RKAGDVIPEVLGPVVE R G+EREF+MPT CPECG+P Sbjct 361 MATLHNASEVVRKGVLIGDTVVVRKAGDVIPEVLGPVVESRTGAEREFVMPTVCPECGTP 420 Query 425 LAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGE 484 LA ++ D DIRCPN+R CP QLRERVFH+A R D+E LG +A ALLQA VIADEG+ Sbjct 421 LAHQRADDVDIRCPNSRSCPAQLRERVFHLAGRGSFDVEALGDKAAAALLQAGVIADEGD 480 Query 485 LFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARA 544 LF LTE DL+ LF TKAG +SANG+RLL NL K PLWRVLV LSIRHVGPTAARA Sbjct 481 LFTLTEDDLVGVPLFTTKAGTVSANGRRLLANLHDRKDQPLWRVLVGLSIRHVGPTAARA 540 Query 545 LATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDER 604 LA FGS++AI AA+ + +A+ EGVGPTIA AV EW AVDWHR++V KWR AGVRM DER Sbjct 541 LADRFGSMEAIEAATAEDIASAEGVGPTIAEAVVEWLAVDWHRDVVRKWREAGVRMADER 600 Query 605 DESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYD 664 DES PRTL GLTIVVTGSL+GFSRD+AKEA+++RGGKA+ +VSKKT++VV G++ GSK D Sbjct 601 DESTPRTLEGLTIVVTGSLSGFSRDEAKEAVLSRGGKASSAVSKKTSFVVVGEAAGSKAD 660 Query 665 KAVELGVPILDEDGFRRLLADGP 687 KA +LGVP+LDE+GF LL GP Sbjct 661 KAEQLGVPVLDEEGFVALLEGGP 683 >gi|256380031|ref|YP_003103691.1| DNA ligase, NAD-dependent [Actinosynnema mirum DSM 43827] gi|255924334|gb|ACU39845.1| DNA ligase, NAD-dependent [Actinosynnema mirum DSM 43827] Length=816 Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/670 (69%), Positives = 524/670 (79%), Gaps = 1/670 (0%) Query 18 QALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVGGAGFA 77 +ALAEEVR HQFRYYV DAP ISD EFD LLR L++LE+ HP L TPDSPTQ VGG F+ Sbjct 51 RALAEEVRGHQFRYYVLDAPTISDGEFDALLRELQSLEDAHPGLATPDSPTQQVGGT-FS 109 Query 78 TDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLVYREGR 137 T+F VDHLERMLSLDNAF D L AW R+ EVGDAA YLCELK+DG+A++L Y GR Sbjct 110 TEFTAVDHLERMLSLDNAFDEDGLRAWFERVGKEVGDAARYLCELKVDGLAINLRYERGR 169 Query 138 LTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDFQALNA 197 L RA TRGDGRTGEDVTLN RT+ DVPE LT D++PVPE++EVRGEV+F ++DF LNA Sbjct 170 LVRALTRGDGRTGEDVTLNLRTLRDVPEVLTGTDEWPVPELVEVRGEVYFAVEDFLELNA 229 Query 198 SLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYLALR 257 LVE G PFANPRN+AAGSLRQKDP VTA RRLRM+CHG+G GF AY ALR Sbjct 230 KLVEAGLPPFANPRNTAAGSLRQKDPKVTASRRLRMVCHGIGKRAGFELERQSDAYAALR 289 Query 258 AWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAP 317 AWGLP SEHT + V R+ +WGEHRH+ HEIDG+VVKVDEV LQRRLGSTSRAP Sbjct 290 AWGLPTSEHTAVVATFDEVWARVAHWGEHRHDAAHEIDGLVVKVDEVPLQRRLGSTSRAP 349 Query 318 RWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASEIKRK 377 RWAIA+KYPPEEA T LLDI V VGRTGR+TPFA M PVKVAGSTV +ATLHNASE+KRK Sbjct 350 RWAIAFKYPPEEATTTLLDIGVQVGRTGRVTPFAIMEPVKVAGSTVARATLHNASEVKRK 409 Query 378 GVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDADIRC 437 GVLIGD +VIRKAGDVIPEVLGPVV++R REF+MP +CPECG L P KEGD DIRC Sbjct 410 GVLIGDRIVIRKAGDVIPEVLGPVVDVRPADAREFVMPASCPECGHALRPMKEGDVDIRC 469 Query 438 PNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERDLLRTD 497 PNA GCP QLRER+ ++ASR+ LD+EVLGYE AL ++V +E +LF LT DLLR D Sbjct 470 PNAEGCPAQLRERLAYLASRSALDVEVLGYEGAAALASSEVYGNEADLFDLTAEDLLRVD 529 Query 498 LFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLDAIAA 557 LFR + G L NG +LL NL+ AK+ PLWRVLVALSIRHVGPTAARALA EFG + AI Sbjct 530 LFRNQDGALVTNGAKLLENLEAAKSQPLWRVLVALSIRHVGPTAARALAVEFGGVQAILD 589 Query 558 ASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLAGLTI 617 A LAA GVGPTIAAAV EW W +E+V +W AAGVRMVDERD ++ R L GL+I Sbjct 590 AEEADLAAAGGVGPTIAAAVREWALTPWRQEVVRRWAAAGVRMVDERDTTIRRDLEGLSI 649 Query 618 VVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPILDED 677 VVTG+L FSRD+AK++I+ RGGKA GSVSKKT +V+ GD+PGSK DKA +L VP+LDE Sbjct 650 VVTGTLADFSRDEAKDSILVRGGKAVGSVSKKTAFVIVGDNPGSKADKAAQLKVPVLDEA 709 Query 678 GFRRLLADGP 687 GFR LL GP Sbjct 710 GFRVLLERGP 719 Lambda K H 0.318 0.135 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1621729085248 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40