BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3016 Length=209 Score E Sequences producing significant alignments: (Bits) Value gi|15610153|ref|NP_217532.1| lipoprotein LpqA [Mycobacterium tub... 423 7e-117 gi|254552095|ref|ZP_05142542.1| lipoprotein lpqA [Mycobacterium ... 421 2e-116 gi|289746822|ref|ZP_06506200.1| lipoprotein lpqA [Mycobacterium ... 421 3e-116 gi|254365651|ref|ZP_04981696.1| lipoprotein lpqA [Mycobacterium ... 420 7e-116 gi|289755134|ref|ZP_06514512.1| lipoprotein lpqA [Mycobacterium ... 376 1e-102 gi|289444582|ref|ZP_06434326.1| lipoprotein lpqA [Mycobacterium ... 366 9e-100 gi|298526487|ref|ZP_07013896.1| predicted protein [Mycobacterium... 294 4e-78 gi|118617524|ref|YP_905856.1| lipoprotein LpqA [Mycobacterium ul... 274 5e-72 gi|240168922|ref|ZP_04747581.1| lipoprotein LpqA [Mycobacterium ... 270 7e-71 gi|296171257|ref|ZP_06852661.1| LpqA family protein [Mycobacteri... 265 4e-69 gi|342858155|ref|ZP_08714810.1| LpqA [Mycobacterium colombiense ... 263 9e-69 gi|254820452|ref|ZP_05225453.1| LpqA [Mycobacterium intracellula... 254 6e-66 gi|41409154|ref|NP_961990.1| LpqA [Mycobacterium avium subsp. pa... 253 9e-66 gi|108798845|ref|YP_639042.1| protein LpqA [Mycobacterium sp. MC... 217 8e-55 gi|120403099|ref|YP_952928.1| LpqA [Mycobacterium vanbaalenii PY... 213 1e-53 gi|333991380|ref|YP_004523994.1| hypothetical protein JDM601_274... 205 3e-51 gi|145224832|ref|YP_001135510.1| LpqA [Mycobacterium gilvum PYR-... 181 5e-44 gi|71273447|emb|CAI47601.1| lipoprotein LpqA [Mycobacterium tube... 95.5 4e-18 gi|317056437|ref|YP_004104904.1| HI0933 family protein [Ruminoco... 40.4 0.15 gi|336458044|gb|EGO37031.1| hypothetical protein MAPs_17420 [Myc... 39.7 0.25 gi|31792023|ref|NP_854516.1| lipoprotein LpqQ [Mycobacterium bov... 39.3 0.37 gi|254231146|ref|ZP_04924473.1| lipoprotein lpqQ [Mycobacterium ... 38.9 0.44 gi|254775733|ref|ZP_05217249.1| LpqQ protein [Mycobacterium aviu... 38.9 0.50 gi|15607975|ref|NP_215350.1| lipoprotein LpqQ [Mycobacterium tub... 38.5 0.63 gi|156346110|ref|XP_001621442.1| hypothetical protein NEMVEDRAFT... 38.1 0.78 gi|15840247|ref|NP_335284.1| hypothetical protein MT0856 [Mycoba... 38.1 0.82 gi|289553091|ref|ZP_06442301.1| lipoprotein lpqQ [Mycobacterium ... 38.1 0.90 gi|339630900|ref|YP_004722542.1| hypothetical protein MAF_08440 ... 37.7 1.2 gi|7209624|dbj|BAA92281.1| ketosynthase [Streptomyces steffisbur... 34.7 8.0 gi|84619196|emb|CAJ42320.1| ketoacyl synthase [Streptomyces stef... 34.7 8.2 gi|1695921|gb|AAC60051.1| aryl hydrocarbon receptor nuclear tran... 34.7 9.9 >gi|15610153|ref|NP_217532.1| lipoprotein LpqA [Mycobacterium tuberculosis H37Rv] gi|15842574|ref|NP_337611.1| hypothetical protein MT3096 [Mycobacterium tuberculosis CDC1551] gi|31794193|ref|NP_856686.1| lipoprotein LpqA [Mycobacterium bovis AF2122/97] 65 more sequence titles Length=209 Score = 423 bits (1088), Expect = 7e-117, Method: Compositional matrix adjust. Identities = 209/209 (100%), Positives = 209/209 (100%), Gaps = 0/209 (0%) Query 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD Sbjct 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 Query 61 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE 120 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE Sbjct 61 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE 120 Query 121 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS 180 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS Sbjct 121 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS 180 Query 181 AALLEVTFCGFPESVSDIVMTNIAANVPG 209 AALLEVTFCGFPESVSDIVMTNIAANVPG Sbjct 181 AALLEVTFCGFPESVSDIVMTNIAANVPG 209 >gi|254552095|ref|ZP_05142542.1| lipoprotein lpqA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=209 Score = 421 bits (1083), Expect = 2e-116, Method: Compositional matrix adjust. Identities = 208/209 (99%), Positives = 208/209 (99%), Gaps = 0/209 (0%) Query 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD Sbjct 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 Query 61 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE 120 DL IIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE Sbjct 61 DLMIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE 120 Query 121 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS 180 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS Sbjct 121 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS 180 Query 181 AALLEVTFCGFPESVSDIVMTNIAANVPG 209 AALLEVTFCGFPESVSDIVMTNIAANVPG Sbjct 181 AALLEVTFCGFPESVSDIVMTNIAANVPG 209 >gi|289746822|ref|ZP_06506200.1| lipoprotein lpqA [Mycobacterium tuberculosis 02_1987] gi|289687350|gb|EFD54838.1| lipoprotein lpqA [Mycobacterium tuberculosis 02_1987] Length=209 Score = 421 bits (1083), Expect = 3e-116, Method: Compositional matrix adjust. Identities = 208/209 (99%), Positives = 208/209 (99%), Gaps = 0/209 (0%) Query 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 MVGLTRPLLLCGATLL AACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD Sbjct 1 MVGLTRPLLLCGATLLTAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 Query 61 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE 120 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE Sbjct 61 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE 120 Query 121 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS 180 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS Sbjct 121 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS 180 Query 181 AALLEVTFCGFPESVSDIVMTNIAANVPG 209 AALLEVTFCGFPESVSDIVMTNIAANVPG Sbjct 181 AALLEVTFCGFPESVSDIVMTNIAANVPG 209 >gi|254365651|ref|ZP_04981696.1| lipoprotein lpqA [Mycobacterium tuberculosis str. Haarlem] gi|134151164|gb|EBA43209.1| lipoprotein lpqA [Mycobacterium tuberculosis str. Haarlem] Length=208 Score = 420 bits (1079), Expect = 7e-116, Method: Compositional matrix adjust. Identities = 207/208 (99%), Positives = 208/208 (100%), Gaps = 0/208 (0%) Query 2 VGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGDD 61 +GLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGDD Sbjct 1 MGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGDD 60 Query 62 LTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISEA 121 LTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISEA Sbjct 61 LTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISEA 120 Query 122 AAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSA 181 AAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSA Sbjct 121 AAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSA 180 Query 182 ALLEVTFCGFPESVSDIVMTNIAANVPG 209 ALLEVTFCGFPESVSDIVMTNIAANVPG Sbjct 181 ALLEVTFCGFPESVSDIVMTNIAANVPG 208 >gi|289755134|ref|ZP_06514512.1| lipoprotein lpqA [Mycobacterium tuberculosis EAS054] gi|289695721|gb|EFD63150.1| lipoprotein lpqA [Mycobacterium tuberculosis EAS054] Length=186 Score = 376 bits (965), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 186/186 (100%), Positives = 186/186 (100%), Gaps = 0/186 (0%) Query 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD Sbjct 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 Query 61 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE 120 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE Sbjct 61 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE 120 Query 121 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS 180 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS Sbjct 121 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS 180 Query 181 AALLEV 186 AALLEV Sbjct 181 AALLEV 186 >gi|289444582|ref|ZP_06434326.1| lipoprotein lpqA [Mycobacterium tuberculosis T46] gi|289417501|gb|EFD14741.1| lipoprotein lpqA [Mycobacterium tuberculosis T46] Length=210 Score = 366 bits (940), Expect = 9e-100, Method: Compositional matrix adjust. Identities = 187/210 (90%), Positives = 192/210 (92%), Gaps = 1/210 (0%) Query 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD Sbjct 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 Query 61 DLTIIPTMDTTYPVDVDDF-AQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLIS 119 DLTIIPTMDTTYPVDVDDF R + + ++ +AFHKTTFQDRPDGSLIS Sbjct 61 DLTIIPTMDTTYPVDVDDFRPTHTTRMPVHLCRDGSLLALRSKAFHKTTFQDRPDGSLIS 120 Query 120 EAAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVL 179 EAAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVL Sbjct 121 EAAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVL 180 Query 180 SAALLEVTFCGFPESVSDIVMTNIAANVPG 209 SAALLEVTFCGFPESVSDIVMTNIAANVPG Sbjct 181 SAALLEVTFCGFPESVSDIVMTNIAANVPG 210 >gi|298526487|ref|ZP_07013896.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298496281|gb|EFI31575.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] Length=142 Score = 294 bits (753), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 142/142 (100%), Positives = 142/142 (100%), Gaps = 0/142 (0%) Query 68 MDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISEAAAAYRD 127 MDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISEAAAAYRD Sbjct 1 MDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISEAAAAYRD 60 Query 128 AGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVT 187 AGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVT Sbjct 61 AGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVT 120 Query 188 FCGFPESVSDIVMTNIAANVPG 209 FCGFPESVSDIVMTNIAANVPG Sbjct 121 FCGFPESVSDIVMTNIAANVPG 142 >gi|118617524|ref|YP_905856.1| lipoprotein LpqA [Mycobacterium ulcerans Agy99] gi|183981705|ref|YP_001849996.1| lipoprotein LpqA [Mycobacterium marinum M] gi|118569634|gb|ABL04385.1| lipoprotein LpqA [Mycobacterium ulcerans Agy99] gi|183175031|gb|ACC40141.1| lipoprotein LpqA [Mycobacterium marinum M] Length=209 Score = 274 bits (701), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 137/209 (66%), Positives = 155/209 (75%), Gaps = 0/209 (0%) Query 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 M L RPLL+C ATLL AACTRVV G A FG +LLDQ+RM+AITG+G+ Sbjct 1 MARLIRPLLMCCATLLAAACTRVVDGEALPAFGASAPEARQAGALLLDQTRMRAITGAGE 60 Query 61 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE 120 DLTIIP MD +YPVD+D A+ P ECRFI++ET FG +I FHKTTFQD PD +LISE Sbjct 61 DLTIIPAMDGSYPVDIDALAKTAPVECRFIFSETTTFGPDIAGFHKTTFQDPPDSALISE 120 Query 121 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS 180 AAA Y DA ARRAFD L V CA S +GWLFVS W A +SL +R GDCGRDYRVLS Sbjct 121 AAAVYPDADIARRAFDDLVGAVGSCADSSSGWLFVSSWKADADSLRMRPGDCGRDYRVLS 180 Query 181 AALLEVTFCGFPESVSDIVMTNIAANVPG 209 ALLEVTFCGFP+SVSDIV+TNIAANVPG Sbjct 181 VALLEVTFCGFPDSVSDIVLTNIAANVPG 209 >gi|240168922|ref|ZP_04747581.1| lipoprotein LpqA [Mycobacterium kansasii ATCC 12478] Length=209 Score = 270 bits (691), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 135/209 (65%), Positives = 157/209 (76%), Gaps = 0/209 (0%) Query 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGMLDVATILLDQSRMQAITGSGD 60 MVG R LL C A L ACTRVV G A FG +L+V T++LDQ+RM+AITG+GD Sbjct 1 MVGSIRLLLWCCAVALTVACTRVVDGEALPPFGLYPLDVLNVDTLMLDQARMRAITGAGD 60 Query 61 DLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISE 120 DLTI+P+MD +PVD+D A+ +PRECRFIYAETA FG +I FHK TFQD P+G+LISE Sbjct 61 DLTIVPSMDGKHPVDIDALAEALPRECRFIYAETATFGPDIAGFHKITFQDPPEGALISE 120 Query 121 AAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLS 180 AA YRD G AR AF++L V +CA S +G L VS W G+SLHIR GDCGRDYRVLS Sbjct 121 GAAVYRDPGIARHAFESLVGAVSNCATSSSGPLLVSVWHVDGDSLHIRPGDCGRDYRVLS 180 Query 181 AALLEVTFCGFPESVSDIVMTNIAANVPG 209 ALLEVTFCGFPESV IVMTN+AANVPG Sbjct 181 VALLEVTFCGFPESVPGIVMTNMAANVPG 209 >gi|296171257|ref|ZP_06852661.1| LpqA family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894225|gb|EFG73982.1| LpqA family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=211 Score = 265 bits (676), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 134/210 (64%), Positives = 156/210 (75%), Gaps = 2/210 (0%) Query 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGM--LDVATILLDQSRMQAITGS 58 M L RPLLLCGA +L AACTRVV G A A FG R+ + ++V TILLDQSRM+AITG+ Sbjct 1 MTRLARPLLLCGAVVLAAACTRVVDGAAVAGFGSPRRDVQGVNVDTILLDQSRMRAITGA 60 Query 59 GDDLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLI 118 G+ LTIIP+MD T PVD+D A PRECRF+YAETA FG ++E FHKTTFQD PDG+LI Sbjct 61 GEHLTIIPSMDGTSPVDIDSLAGTAPRECRFVYAETATFGPDVEEFHKTTFQDPPDGALI 120 Query 119 SEAAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRV 178 SE AAAYRD TARRAF L V DCA + G +V W A +LH+R G CGRDYR+ Sbjct 121 SEGAAAYRDVDTARRAFGALVAAVGDCANTADGQQYVGDWAADAGTLHLRPGGCGRDYRL 180 Query 179 LSAALLEVTFCGFPESVSDIVMTNIAANVP 208 S A+LEVT CGF +SVSDIVMTNI AN+P Sbjct 181 RSVAILEVTSCGFAQSVSDIVMTNIVANMP 210 >gi|342858155|ref|ZP_08714810.1| LpqA [Mycobacterium colombiense CECT 3035] gi|342133859|gb|EGT87039.1| LpqA [Mycobacterium colombiense CECT 3035] Length=213 Score = 263 bits (673), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 137/205 (67%), Positives = 156/205 (77%), Gaps = 5/205 (2%) Query 7 PLLLCGATLLIAACTRVVGGTASATFGGDR---QGMLDVATILLDQSRMQAITGSGDDLT 63 P LLC L+A CTRVV G A A G DR QG +DV TILLDQSRM+AITG+G+ L+ Sbjct 10 PPLLCAVVTLVA-CTRVVDGAAVAGSGADRRVVQG-VDVDTILLDQSRMRAITGAGEHLS 67 Query 64 IIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISEAAA 123 IIP+MD T PVD+D A PRECRFIYAETA FG ++EAFHKTTFQD PDG+LISE AA Sbjct 68 IIPSMDGTSPVDIDALADTAPRECRFIYAETATFGRDLEAFHKTTFQDPPDGALISEGAA 127 Query 124 AYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAAL 183 AYRDA TARRAF L TV DCA +G L+V W A SLH+R G CGRDYR+LS A+ Sbjct 128 AYRDADTARRAFGALVGTVGDCANGSSGQLYVGDWNADATSLHLRPGGCGRDYRILSVAM 187 Query 184 LEVTFCGFPESVSDIVMTNIAANVP 208 LEVTFCGF +SVSDIVMTNI+AN+P Sbjct 188 LEVTFCGFAQSVSDIVMTNISANMP 212 >gi|254820452|ref|ZP_05225453.1| LpqA [Mycobacterium intracellulare ATCC 13950] Length=198 Score = 254 bits (649), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 130/197 (66%), Positives = 151/197 (77%), Gaps = 4/197 (2%) Query 15 LLIAACTRVVGGTASATFGGDR---QGMLDVATILLDQSRMQAITGSGDDLTIIPTMDTT 71 L+ +CTRVV G A A +R QG ++V TILLDQSRM+AITG+G+ LTIIP+MD T Sbjct 2 LMAVSCTRVVDGAALAGPDTNRRVVQG-INVDTILLDQSRMRAITGAGEHLTIIPSMDGT 60 Query 72 YPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISEAAAAYRDAGTA 131 PV++D AQ PRECRFIY ETA FG+++EAFHKTTFQD PDG+LISE AAAYRDA A Sbjct 61 SPVNIDALAQTAPRECRFIYDETATFGTDLEAFHKTTFQDPPDGALISEGAAAYRDAEIA 120 Query 132 RRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVTFCGF 191 R AF+ L TV DCA G L+V W A G SLH+R G CGRDYR+LS A+LEVTFCGF Sbjct 121 RTAFNALVGTVGDCANGSGGQLYVGEWNADGTSLHLRPGGCGRDYRILSVAMLEVTFCGF 180 Query 192 PESVSDIVMTNIAANVP 208 +SVSDIVMTNIAANVP Sbjct 181 AQSVSDIVMTNIAANVP 197 >gi|41409154|ref|NP_961990.1| LpqA [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776290|ref|ZP_05217806.1| LpqA [Mycobacterium avium subsp. avium ATCC 25291] gi|41397974|gb|AAS05604.1| LpqA [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459167|gb|EGO38114.1| hypothetical protein MAPs_06050 [Mycobacterium avium subsp. paratuberculosis S397] Length=214 Score = 253 bits (647), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 132/203 (66%), Positives = 151/203 (75%), Gaps = 4/203 (1%) Query 9 LLCGATLLIAACTRVVGGTASATFGGDR---QGMLDVATILLDQSRMQAITGSGDDLTII 65 LL LL AAC+RVV G A G + QG +DV ILLDQSRM+AITG+G+ L+II Sbjct 12 LLGAVVLLAAACSRVVDGAAVPGPGANHRVVQG-VDVDAILLDQSRMRAITGAGEHLSII 70 Query 66 PTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISEAAAAY 125 P+MD T PVD++ AQ P ECRFIYAETA FG ++EAFHKTTFQD PDG+LISE AAAY Sbjct 71 PSMDGTSPVDIEALAQTAPPECRFIYAETATFGRDLEAFHKTTFQDPPDGALISEGAAAY 130 Query 126 RDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLE 185 RDA TARRAF +L V DCA G L+V W A SLH+R G CGRDYR+LS A+LE Sbjct 131 RDADTARRAFGSLVGAVTDCANGSGGQLYVGDWNADAGSLHLRPGGCGRDYRILSVAMLE 190 Query 186 VTFCGFPESVSDIVMTNIAANVP 208 VTFCGF +SVSDIVMTNIAANVP Sbjct 191 VTFCGFAQSVSDIVMTNIAANVP 213 >gi|108798845|ref|YP_639042.1| protein LpqA [Mycobacterium sp. MCS] gi|119867960|ref|YP_937912.1| protein LpqA [Mycobacterium sp. KMS] gi|126434445|ref|YP_001070136.1| protein LpqA [Mycobacterium sp. JLS] gi|108769264|gb|ABG07986.1| LpqA [Mycobacterium sp. MCS] gi|119694049|gb|ABL91122.1| LpqA [Mycobacterium sp. KMS] gi|126234245|gb|ABN97645.1| LpqA [Mycobacterium sp. JLS] Length=212 Score = 217 bits (553), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 106/205 (52%), Positives = 140/205 (69%), Gaps = 3/205 (1%) Query 8 LLLCGATLLIAACTRVVGGTASATFGG---DRQGMLDVATILLDQSRMQAITGSGDDLTI 64 L++ A +L A C VVGGTA + G D + +DV T+LL+ ++MQAITG+G+DLTI Sbjct 8 LMVSVAAVLTAGCVSVVGGTAVRSTPGLDDDSRSPVDVDTVLLETAQMQAITGAGEDLTI 67 Query 65 IPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISEAAAA 124 IPTMD PVD++ + +P C++++AE+ FG E+E FHKTTFQ+ PDG LIS+ AA Sbjct 68 IPTMDGKIPVDIEPLMEQMPTPCQWLFAESQTFGDEVEEFHKTTFQNPPDGGLISQGAAG 127 Query 125 YRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALL 184 YRD TARRAFD + V C + G ++ WTA +++ R GDCGRDYR+ S L+ Sbjct 128 YRDPETARRAFDGVVALVDGCGTTNYGPAYIGEWTATADAVQTRPGDCGRDYRLKSTVLV 187 Query 185 EVTFCGFPESVSDIVMTNIAANVPG 209 EVTFC F E+V DIVMTNI A VPG Sbjct 188 EVTFCAFTEAVPDIVMTNILAKVPG 212 >gi|120403099|ref|YP_952928.1| LpqA [Mycobacterium vanbaalenii PYR-1] gi|119955917|gb|ABM12922.1| LpqA [Mycobacterium vanbaalenii PYR-1] Length=212 Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 108/212 (51%), Positives = 141/212 (67%), Gaps = 3/212 (1%) Query 1 MVGLTRPLLLCGATLLIAACTRVVGGTASATFGGDRQGML---DVATILLDQSRMQAITG 57 M G LLC +L CT+ VGGTA +G L DV T+LLD++RMQA+TG Sbjct 1 MTGRASASLLCAVAILATGCTQQVGGTAVRPAPAADEGSLSPIDVDTVLLDRARMQAVTG 60 Query 58 SGDDLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSL 117 +G+ LT+IP ++ PVD+D + +P +C ++YAET VFGS++E F K+T+Q+ P G L Sbjct 61 AGEHLTMIPGTESKVPVDLDLMLKTVPPQCEWVYAETQVFGSDVEEFRKSTYQNPPGGGL 120 Query 118 ISEAAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYR 177 IS+AAA Y DA TARRAFD +A + C A+ +G V T +S+H R GDCGRDYR Sbjct 121 ISQAAAGYPDAATARRAFDVVAERIEACGATDSGRAMVGDVTRTTDSVHTRPGDCGRDYR 180 Query 178 VLSAALLEVTFCGFPESVSDIVMTNIAANVPG 209 V S L+E+TFC FP SV DIVMTNI +NVPG Sbjct 181 VKSVLLVEITFCAFPASVPDIVMTNILSNVPG 212 >gi|333991380|ref|YP_004523994.1| hypothetical protein JDM601_2740 [Mycobacterium sp. JDM601] gi|333487348|gb|AEF36740.1| lipoprotein LpqA [Mycobacterium sp. JDM601] Length=194 Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 106/191 (56%), Positives = 133/191 (70%), Gaps = 1/191 (0%) Query 20 CTRVVGGTASATFGG-DRQGMLDVATILLDQSRMQAITGSGDDLTIIPTMDTTYPVDVDD 78 CTR++ G+A G + V ++LD RM+AITG+G++LTIIPTMD+T PVD+D Sbjct 4 CTRLIDGSALPPLAPLVPDGAVHVGRLMLDTPRMRAITGTGEELTIIPTMDSTGPVDIDG 63 Query 79 FAQPIPRECRFIYAETAVFGSEIEAFHKTTFQDRPDGSLISEAAAAYRDAGTARRAFDTL 138 A +P CRFIYAET VFG+E FHKTT+Q P G+LISEAAAAY D +ARRAFD + Sbjct 64 LAATVPPPCRFIYAETTVFGTEHTQFHKTTYQYPPRGALISEAAAAYPDPESARRAFDAV 123 Query 139 AVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVTFCGFPESVSDI 198 V +CA SPAG V TA LH RAGDCGR Y++ S LLEVT CGF ES++D+ Sbjct 124 VAAVAECADSPAGPGLVGDQTADEQFLHTRAGDCGRGYQLKSVVLLEVTHCGFSESIADL 183 Query 199 VMTNIAANVPG 209 V+TN+AA +PG Sbjct 184 VLTNLAAGIPG 194 >gi|145224832|ref|YP_001135510.1| LpqA [Mycobacterium gilvum PYR-GCK] gi|315445163|ref|YP_004078042.1| hypothetical protein Mspyr1_35990 [Mycobacterium sp. Spyr1] gi|145217318|gb|ABP46722.1| LpqA [Mycobacterium gilvum PYR-GCK] gi|315263466|gb|ADU00208.1| hypothetical protein Mspyr1_35990 [Mycobacterium sp. Spyr1] Length=219 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 103/217 (48%), Positives = 138/217 (64%), Gaps = 9/217 (4%) Query 1 MVGLTRPLLLCGATLLIAACTRVVGGTASAT---FGGDRQGMLDVATILLDQSRMQAITG 57 M G LLC ++ CT++VGG A T D + +DV T+LL+ ++MQA+TG Sbjct 1 MTGRAWAPLLCATAIMAVGCTQIVGGDAVRTVRAIDEDSRSPVDVDTVLLESAQMQAVTG 60 Query 58 SGDDLTIIPTMDTTYPVDVD-DFAQP-----IPRECRFIYAETAVFGSEIEAFHKTTFQD 111 +G DLT IP ++ PVDV D A P +P +C +++AET VFGSE+E F KT++Q+ Sbjct 61 AGRDLTAIPGTESKVPVDVPVDMALPRMAKDLPPQCGWVFAETQVFGSEVEEFRKTSYQN 120 Query 112 RPDGSLISEAAAAYRDAGTARRAFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGD 171 P G LIS+AAA YRDA TA+RAF + + C + +G V T +S+ R G+ Sbjct 121 PPRGGLISQAAAGYRDAATAQRAFAAIVEQIEGCGTTDSGAAMVGMVTTTPDSVQTRPGN 180 Query 172 CGRDYRVLSAALLEVTFCGFPESVSDIVMTNIAANVP 208 CGRDYRV S L+EVTFC FP+SV +IVMTNI ANVP Sbjct 181 CGRDYRVKSVVLVEVTFCAFPDSVPEIVMTNILANVP 217 >gi|71273447|emb|CAI47601.1| lipoprotein LpqA [Mycobacterium tuberculosis] Length=45 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 45/45 (100%), Positives = 45/45 (100%), Gaps = 0/45 (0%) Query 165 LHIRAGDCGRDYRVLSAALLEVTFCGFPESVSDIVMTNIAANVPG 209 LHIRAGDCGRDYRVLSAALLEVTFCGFPESVSDIVMTNIAANVPG Sbjct 1 LHIRAGDCGRDYRVLSAALLEVTFCGFPESVSDIVMTNIAANVPG 45 >gi|317056437|ref|YP_004104904.1| HI0933 family protein [Ruminococcus albus 7] gi|315448706|gb|ADU22270.1| HI0933 family protein [Ruminococcus albus 7] Length=427 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/82 (30%), Positives = 42/82 (52%), Gaps = 11/82 (13%) Query 23 VVGGTASATFGGDRQGMLDVATILLDQS----RMQAITGSGDDLTIIPTMDTTYPVDVDD 78 +VGG A+ F G + G+L + ++++++ R ITG G + T D+D Sbjct 21 IVGGGAAGLFCGAQLGLLGKSAVIIEKNERFGRKLRITGKG-------RCNVTNNCDIDT 73 Query 79 FAQPIPRECRFIYAETAVFGSE 100 + IPR RF+Y+ + F +E Sbjct 74 VMKNIPRNGRFLYSSLSRFTTE 95 >gi|336458044|gb|EGO37031.1| hypothetical protein MAPs_17420 [Mycobacterium avium subsp. paratuberculosis S397] Length=165 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 33/121 (28%), Positives = 53/121 (44%), Gaps = 10/121 (8%) Query 84 PRECRFIYAETAVFGSEIEAFHKTTF---------QDRPDG-SLISEAAAAYRDAGTARR 133 P CR ++ + A+F + F T+ Q + G + + +A YRDA TAR Sbjct 29 PTPCRAVFDQEAIFDGDWTQFRSATYNGDVYSGTGQVKVRGIANVVQAVGIYRDADTARA 88 Query 134 AFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVTFCGFPE 193 FD L ++ C A A + ++L + + YRV S+ LL V G P+ Sbjct 89 HFDQLLPSLTACTALHAKNYDFTVRQLDTDTLSLSSSVWKLFYRVKSSVLLYVGALGVPQ 148 Query 194 S 194 + Sbjct 149 T 149 >gi|31792023|ref|NP_854516.1| lipoprotein LpqQ [Mycobacterium bovis AF2122/97] gi|121636758|ref|YP_976981.1| putative lipoprotein lpqQ [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989229|ref|YP_002643916.1| putative lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] gi|31617610|emb|CAD93720.1| POSSIBLE LIPOPROTEIN LPQQ [Mycobacterium bovis AF2122/97] gi|121492405|emb|CAL70873.1| Possible lipoprotein lpqQ [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772342|dbj|BAH25148.1| putative lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600774|emb|CCC63445.1| possible lipoprotein lpqQ [Mycobacterium bovis BCG str. Moreau RDJ] Length=214 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 32/136 (24%), Positives = 58/136 (43%), Gaps = 11/136 (8%) Query 83 IPRECRFIYAETAVFGSEIEAF-----HKTTFQDRPDGSL----ISEAAAAYRDAGTARR 133 +P CR + + FG++ F H T RP G + +S+A A Y D TAR Sbjct 78 VPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARG 137 Query 134 AFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVTFCGFP- 192 F L ++ +CA + +++ I A YR+ S+ + V G Sbjct 138 VFHRLESSLAECAGLHDPYFDFILGRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEP 197 Query 193 -ESVSDIVMTNIAANV 207 E ++++++ I+ + Sbjct 198 AEPIANVILQTISDRI 213 >gi|254231146|ref|ZP_04924473.1| lipoprotein lpqQ [Mycobacterium tuberculosis C] gi|124600205|gb|EAY59215.1| lipoprotein lpqQ [Mycobacterium tuberculosis C] Length=214 Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust. Identities = 33/136 (25%), Positives = 58/136 (43%), Gaps = 11/136 (8%) Query 83 IPRECRFIYAETAVFGSEIEAF-----HKTTFQDRPDGSLI----SEAAAAYRDAGTARR 133 +P CR + + FG++ F H T RP G +I S+A A Y D TAR Sbjct 78 VPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVIVETVSQAIALYPDPSTARG 137 Query 134 AFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVTFCGFP- 192 F L ++ +CA + +++ I A YR+ S+ + V G Sbjct 138 VFHRLESSLAECAGLHDPYFDFILDRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEP 197 Query 193 -ESVSDIVMTNIAANV 207 E ++++++ I+ + Sbjct 198 AEPIANVILQTISDRI 213 >gi|254775733|ref|ZP_05217249.1| LpqQ protein [Mycobacterium avium subsp. avium ATCC 25291] Length=165 Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust. Identities = 32/121 (27%), Positives = 53/121 (44%), Gaps = 10/121 (8%) Query 84 PRECRFIYAETAVFGSEIEAFHKTTF---------QDRPDG-SLISEAAAAYRDAGTARR 133 P CR ++ + A+F + F T+ Q + G + + +A YRDA TAR Sbjct 29 PTPCRAVFDQEAIFDGDWTQFRSATYNGDVYSGTGQVKVRGIANVVQAVGIYRDADTARA 88 Query 134 AFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVTFCGFPE 193 FD L ++ C A A + ++L + + YRV S+ L+ V G P+ Sbjct 89 HFDQLLPSLTACTALHAKNYDFTVRQLDTDTLSLSSSVWKLFYRVKSSVLIYVGALGVPQ 148 Query 194 S 194 + Sbjct 149 T 149 >gi|15607975|ref|NP_215350.1| lipoprotein LpqQ [Mycobacterium tuberculosis H37Rv] gi|148660612|ref|YP_001282135.1| putative lipoprotein LpqQ [Mycobacterium tuberculosis H37Ra] gi|148822041|ref|YP_001286795.1| lipoprotein lpqQ [Mycobacterium tuberculosis F11] 65 more sequence titles Length=214 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 32/136 (24%), Positives = 58/136 (43%), Gaps = 11/136 (8%) Query 83 IPRECRFIYAETAVFGSEIEAF-----HKTTFQDRPDGSL----ISEAAAAYRDAGTARR 133 +P CR + + FG++ F H T RP G + +S+A A Y D TAR Sbjct 78 VPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARG 137 Query 134 AFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVTFCGFP- 192 F L ++ +CA + +++ I A YR+ S+ + V G Sbjct 138 VFHRLESSLAECAGLHDPYFDFILDRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEP 197 Query 193 -ESVSDIVMTNIAANV 207 E ++++++ I+ + Sbjct 198 AEPIANVILQTISDRI 213 >gi|156346110|ref|XP_001621442.1| hypothetical protein NEMVEDRAFT_v1g221987 [Nematostella vectensis] gi|156207377|gb|EDO29342.1| predicted protein [Nematostella vectensis] Length=970 Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust. Identities = 20/55 (37%), Positives = 34/55 (62%), Gaps = 0/55 (0%) Query 99 SEIEAFHKTTFQDRPDGSLISEAAAAYRDAGTARRAFDTLAVTVHDCAASPAGWL 153 SE+++ H+ T + R +LI++ AAY +A R AFDTL + + +AS G++ Sbjct 335 SELQSKHQQTEESRQLLALITQTQAAYINADNQREAFDTLLGRILEVSASQFGFV 389 >gi|15840247|ref|NP_335284.1| hypothetical protein MT0856 [Mycobacterium tuberculosis CDC1551] gi|13880405|gb|AAK45098.1| hypothetical protein MT0856 [Mycobacterium tuberculosis CDC1551] Length=283 Score = 38.1 bits (87), Expect = 0.82, Method: Compositional matrix adjust. Identities = 35/138 (26%), Positives = 61/138 (45%), Gaps = 15/138 (10%) Query 83 IPRECRFIYAETAVFGSEIEAF-----HKTTFQDRPDGSL----ISEAAAAYRDAGTARR 133 +P CR + + FG++ F H T RP G + +S+A A Y D TAR Sbjct 147 VPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARG 206 Query 134 AFDTLAVTVHDCAA--SPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVTFCGF 191 F L ++ +CA P + R A +++ I A YR+ S+ + V G Sbjct 207 VFHRLESSLAECAGLHDPYFDFILDRPDA--STVRIGAAGWSHVYRLKSSVFISVGVLGI 264 Query 192 P--ESVSDIVMTNIAANV 207 E ++++++ I+ + Sbjct 265 EPAEPIANVILQTISDRI 282 >gi|289553091|ref|ZP_06442301.1| lipoprotein lpqQ [Mycobacterium tuberculosis KZN 605] gi|289752882|ref|ZP_06512260.1| lipoprotein lpqQ [Mycobacterium tuberculosis EAS054] gi|289752888|ref|ZP_06512266.1| lipoprotein LpqQ [Mycobacterium tuberculosis EAS054] gi|289437723|gb|EFD20216.1| lipoprotein lpqQ [Mycobacterium tuberculosis KZN 605] gi|289693469|gb|EFD60898.1| lipoprotein lpqQ [Mycobacterium tuberculosis EAS054] gi|289693475|gb|EFD60904.1| lipoprotein LpqQ [Mycobacterium tuberculosis EAS054] Length=251 Score = 38.1 bits (87), Expect = 0.90, Method: Compositional matrix adjust. Identities = 32/136 (24%), Positives = 58/136 (43%), Gaps = 11/136 (8%) Query 83 IPRECRFIYAETAVFGSEIEAF-----HKTTFQDRPDGSL----ISEAAAAYRDAGTARR 133 +P CR + + FG++ F H T RP G + +S+A A Y D TAR Sbjct 115 VPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARG 174 Query 134 AFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVTFCGFP- 192 F L ++ +CA + +++ I A YR+ S+ + V G Sbjct 175 VFHRLESSLAECAGLHDPYFDFILDRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEP 234 Query 193 -ESVSDIVMTNIAANV 207 E ++++++ I+ + Sbjct 235 AEPIANVILQTISDRI 250 >gi|339630900|ref|YP_004722542.1| hypothetical protein MAF_08440 [Mycobacterium africanum GM041182] gi|339330256|emb|CCC25916.1| putative lipoprotein LPQQ [Mycobacterium africanum GM041182] Length=214 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/136 (24%), Positives = 57/136 (42%), Gaps = 11/136 (8%) Query 83 IPRECRFIYAETAVFG-----SEIEAFHKTTFQDRPDGSL----ISEAAAAYRDAGTARR 133 +P CR + + FG S +H T RP G + +S+A A Y D TAR Sbjct 78 VPGPCRVVGSSDRTFGTDWSESRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARG 137 Query 134 AFDTLAVTVHDCAASPAGWLFVSRWTAGGNSLHIRAGDCGRDYRVLSAALLEVTFCGFP- 192 F L ++ +CA + +++ I A YR+ S+ + V G Sbjct 138 VFHRLESSLAECAGLHDPYFDFILDRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEP 197 Query 193 -ESVSDIVMTNIAANV 207 E ++++++ I+ + Sbjct 198 AEPIANVILQTISDRI 213 >gi|7209624|dbj|BAA92281.1| ketosynthase [Streptomyces steffisburgensis] Length=394 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 22/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%) Query 47 LDQSRMQAITGSGDDLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHK 106 D++R + G G + ++ +D R ++YAE A F S AFH Sbjct 220 FDRTRNGFVLGEGSAMFVLEDLDHAL------------RRGAYVYAEIAGFASRCNAFHM 267 Query 107 TTFQDRPDGSLISEA 121 T RPDG ++EA Sbjct 268 TGL--RPDGKEMAEA 280 >gi|84619196|emb|CAJ42320.1| ketoacyl synthase [Streptomyces steffisburgensis] Length=422 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 27/93 (30%), Positives = 40/93 (44%), Gaps = 15/93 (16%) Query 47 LDQSRMQAITGSGDDLTIIPTMDTTYPVDVDDFAQPIPRECRFIYAETAVFGSEIEAFHK 106 D++R + G G + ++ +D R ++YAE A F S AFH Sbjct 228 FDRTRNGFVLGEGSAMFVLEDLDHAL------------RRGAYVYAEIAGFASRCNAFHM 275 Query 107 TTFQDRPDGSLISEA-AAAYRDAGTARRAFDTL 138 T RPDG ++EA A +GTA D + Sbjct 276 TGL--RPDGKEMAEAIRVALARSGTAPEDIDYI 306 >gi|1695921|gb|AAC60051.1| aryl hydrocarbon receptor nuclear translocator protein isoform a [Oncorhynchus mykiss] Length=636 Score = 34.7 bits (78), Expect = 9.9, Method: Composition-based stats. Identities = 30/133 (23%), Positives = 55/133 (42%), Gaps = 10/133 (7%) Query 33 GGDRQGMLDVATILLDQSRMQAITGSGDDLTIIPTMDTTYPVDVDDFAQPIPRECRFIYA 92 GG R G+ + + L Q +QA+T +G D + TMD ++ P P + +F+ + Sbjct 452 GGGRDGLYEAGQVTLPQMPVQAVTAAGTDHS--KTMDKA---EMHPSMYPNPDQAKFLPS 506 Query 93 ETAVFGSEIEAFHKTTFQDRPDGSLISEAAAAYRDAGTARRAFDTL-----AVTVHDCAA 147 +A + T +R + + S +R G + RA L + H + Sbjct 507 TSAPGVPIYPQDNNYTTANRSNDTYSSSPPGQWRQCGPSGRASSKLRTGQSSTPTHRTTS 566 Query 148 SPAGWLFVSRWTA 160 + +F WT+ Sbjct 567 LTSSLMFSPCWTS 579 Lambda K H 0.323 0.136 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 242769087144 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40