BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3018c Length=434 Score E Sequences producing significant alignments: (Bits) Value gi|57117045|ref|YP_177918.1| PPE family protein [Mycobacterium t... 814 0.0 gi|339295852|gb|AEJ47963.1| PPE family protein [Mycobacterium tu... 813 0.0 gi|121638900|ref|YP_979124.1| PPE family protein [Mycobacterium ... 809 0.0 gi|289746824|ref|ZP_06506202.1| PPE family protein [Mycobacteriu... 808 0.0 gi|31794195|ref|NP_856688.1| PPE family protein [Mycobacterium b... 808 0.0 gi|297732644|ref|ZP_06961762.1| PPE family protein [Mycobacteriu... 806 0.0 gi|340628008|ref|YP_004746460.1| PPE family protein [Mycobacteri... 805 0.0 gi|289755136|ref|ZP_06514514.1| PPE family protein [Mycobacteriu... 642 0.0 gi|298526488|ref|ZP_07013897.1| PPE family protein [Mycobacteriu... 635 4e-180 gi|15842579|ref|NP_337616.1| PPE family protein [Mycobacterium t... 585 5e-165 gi|344220853|gb|AEN01484.1| PPE family protein [Mycobacterium tu... 575 7e-162 gi|323718351|gb|EGB27527.1| PPE family protein [Mycobacterium tu... 573 2e-161 gi|18202062|sp|O53268.2|PPE47_MYCTU RecName: Full=Uncharacterize... 548 6e-154 gi|31794199|ref|NP_856692.1| PPE family protein [Mycobacterium b... 543 3e-152 gi|15842584|ref|NP_337621.1| PPE family protein [Mycobacterium t... 543 3e-152 gi|308369932|ref|ZP_07419565.2| PPE family protein [Mycobacteriu... 536 3e-150 gi|254233098|ref|ZP_04926425.1| PPE family protein [Mycobacteriu... 527 1e-147 gi|340628014|ref|YP_004746466.1| ppe family protein [Mycobacteri... 523 3e-146 gi|306777315|ref|ZP_07415652.1| PPE family protein [Mycobacteriu... 504 1e-140 gi|323718358|gb|EGB27533.1| PPE family protein [Mycobacterium tu... 464 1e-128 gi|57117048|ref|YP_177920.1| PPE family protein [Mycobacterium t... 425 7e-117 gi|339295856|gb|AEJ47967.1| PPE family protein [Mycobacterium tu... 417 2e-114 gi|289571220|ref|ZP_06451447.1| PPE family protein [Mycobacteriu... 380 2e-103 gi|344220856|gb|AEN01487.1| PPE family protein [Mycobacterium tu... 367 3e-99 gi|240173310|ref|ZP_04751968.1| PPE family protein [Mycobacteriu... 342 8e-92 gi|307081148|ref|ZP_07490318.1| putative PPE family protein [Myc... 333 4e-89 gi|306973438|ref|ZP_07486099.1| putative PPE family protein [Myc... 333 5e-89 gi|306777323|ref|ZP_07415660.1| PPE family protein [Mycobacteriu... 332 8e-89 gi|289448696|ref|ZP_06438440.1| LOW QUALITY PROTEIN: PPE family ... 324 2e-86 gi|340628712|ref|YP_004747164.1| ppe family protein [Mycobacteri... 295 8e-78 gi|581362|emb|CAA41961.1| dihydrofolate reductase [Mycobacterium... 277 2e-72 gi|306777322|ref|ZP_07415659.1| PPE family protein [Mycobacteriu... 273 5e-71 gi|289448692|ref|ZP_06438436.1| PPE family protein [Mycobacteriu... 272 7e-71 gi|323718354|gb|EGB27529.1| PPE family protein [Mycobacterium tu... 272 1e-70 gi|308380548|ref|ZP_07669214.1| hypothetical protein TMKG_04105 ... 270 3e-70 gi|240171402|ref|ZP_04750061.1| PPE family protein [Mycobacteriu... 268 2e-69 gi|306777316|ref|ZP_07415653.1| PPE family protein [Mycobacteriu... 263 3e-68 gi|240168396|ref|ZP_04747055.1| PPE family protein [Mycobacteriu... 261 2e-67 gi|183983621|ref|YP_001851912.1| PPE family protein [Mycobacteri... 261 2e-67 gi|240168498|ref|ZP_04747157.1| PPE family protein, PPE4 [Mycoba... 258 1e-66 gi|289748258|ref|ZP_06507636.1| PPE family protein [Mycobacteriu... 254 2e-65 gi|240169845|ref|ZP_04748504.1| PPE family protein [Mycobacteriu... 253 6e-65 gi|183985228|ref|YP_001853519.1| PPE family protein, PPE46 [Myco... 253 6e-65 gi|289445339|ref|ZP_06435083.1| PPE family protein [Mycobacteriu... 252 8e-65 gi|289441176|ref|ZP_06430920.1| PPE family protein [Mycobacteriu... 251 1e-64 gi|240168963|ref|ZP_04747622.1| PPE family protein [Mycobacteriu... 250 4e-64 gi|240168835|ref|ZP_04747494.1| PPE family protein [Mycobacteriu... 243 5e-62 gi|296167589|ref|ZP_06849914.1| PPE family protein [Mycobacteriu... 239 8e-61 gi|240171575|ref|ZP_04750234.1| PPE family protein [Mycobacteriu... 236 5e-60 gi|342859230|ref|ZP_08715884.1| hypothetical protein MCOL_10138 ... 234 2e-59 >gi|57117045|ref|YP_177918.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148662869|ref|YP_001284392.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148824208|ref|YP_001288962.1| PPE family protein [Mycobacterium tuberculosis F11] 19 more sequence titles Length=434 Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/434 (99%), Positives = 434/434 (100%), Gaps = 0/434 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG Sbjct 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP 300 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP Sbjct 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP 300 Query 301 LLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV 360 LLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV Sbjct 301 LLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV 360 Query 361 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGP 420 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGP Sbjct 361 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGP 420 Query 421 DLVGVAGDGGLVSV 434 DLVGVAGDGGLVSV Sbjct 421 DLVGVAGDGGLVSV 434 >gi|339295852|gb|AEJ47963.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=434 Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/434 (99%), Positives = 433/434 (99%), Gaps = 0/434 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELS VVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSAVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG Sbjct 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP 300 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP Sbjct 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP 300 Query 301 LLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV 360 LLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV Sbjct 301 LLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV 360 Query 361 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGP 420 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGP Sbjct 361 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGP 420 Query 421 DLVGVAGDGGLVSV 434 DLVGVAGDGGLVSV Sbjct 421 DLVGVAGDGGLVSV 434 >gi|121638900|ref|YP_979124.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991392|ref|YP_002646081.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494548|emb|CAL73029.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774507|dbj|BAH27313.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602939|emb|CCC65617.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=437 Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/431 (99%), Positives = 430/431 (99%), Gaps = 0/431 (0%) Query 4 PVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGP 63 PVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELS VVAAVGAGVWQGP Sbjct 7 PVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSAVVAAVGAGVWQGP 66 Query 64 SAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVL 123 SAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVL Sbjct 67 SAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVL 126 Query 124 VATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGAN 183 VATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGAN Sbjct 127 VATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGAN 186 Query 184 EASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNI 243 EASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNI Sbjct 187 EASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNI 246 Query 244 IGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGPLLG 303 IGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGPLLG Sbjct 247 IGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGPLLG 306 Query 304 ALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPA 363 ALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPA Sbjct 307 ALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPA 366 Query 364 PASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLV 423 PASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLV Sbjct 367 PASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLV 426 Query 424 GVAGDGGLVSV 434 GVAGDGGLVSV Sbjct 427 GVAGDGGLVSV 437 >gi|289746824|ref|ZP_06506202.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289687352|gb|EFD54840.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=434 Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/434 (99%), Positives = 433/434 (99%), Gaps = 0/434 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG Sbjct 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP 300 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP Sbjct 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP 300 Query 301 LLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV 360 LLGALAAAVVPGVAG+ G+AGLAA+PAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV Sbjct 301 LLGALAAAVVPGVAGVTGLAGLAAVPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV 360 Query 361 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGP 420 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGP Sbjct 361 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGP 420 Query 421 DLVGVAGDGGLVSV 434 DLVGVAGDGGLVSV Sbjct 421 DLVGVAGDGGLVSV 434 >gi|31794195|ref|NP_856688.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31619790|emb|CAD96730.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=437 Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/431 (99%), Positives = 430/431 (99%), Gaps = 0/431 (0%) Query 4 PVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGP 63 PVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELS VVAAVGAGVWQGP Sbjct 7 PVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSAVVAAVGAGVWQGP 66 Query 64 SAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVL 123 SAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVL Sbjct 67 SAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVL 126 Query 124 VATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGAN 183 VATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGAN Sbjct 127 VATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGAN 186 Query 184 EASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNI 243 EASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNI Sbjct 187 EASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNI 246 Query 244 IGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGPLLG 303 IGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGPLLG Sbjct 247 IGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGPLLG 306 Query 304 ALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPA 363 ALAAAVVPGVAGLAGVAGLAA+PAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPA Sbjct 307 ALAAAVVPGVAGLAGVAGLAAVPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPA 366 Query 364 PASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLV 423 PASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLV Sbjct 367 PASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLV 426 Query 424 GVAGDGGLVSV 434 GVAGDGGLVSV Sbjct 427 GVAGDGGLVSV 437 >gi|297732644|ref|ZP_06961762.1| PPE family protein [Mycobacterium tuberculosis KZN R506] Length=430 Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/430 (99%), Positives = 430/430 (100%), Gaps = 0/430 (0%) Query 5 VWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGPS 64 +WLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGPS Sbjct 1 MWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGPS 60 Query 65 AELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVLV 124 AELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVLV Sbjct 61 AELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVLV 120 Query 125 ATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGANE 184 ATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGANE Sbjct 121 ATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGANE 180 Query 185 ASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNII 244 ASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNII Sbjct 181 ASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNII 240 Query 245 GFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGPLLGA 304 GFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGPLLGA Sbjct 241 GFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGPLLGA 300 Query 305 LAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPAP 364 LAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPAP Sbjct 301 LAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPAP 360 Query 365 ASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLVG 424 ASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLVG Sbjct 361 ASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLVG 420 Query 425 VAGDGGLVSV 434 VAGDGGLVSV Sbjct 421 VAGDGGLVSV 430 >gi|340628008|ref|YP_004746460.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006198|emb|CCC45372.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=434 Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/434 (99%), Positives = 430/434 (99%), Gaps = 0/434 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELS VVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSAVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALA MPTLPELA NHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAAMPTLPELAVNHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG Sbjct 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP 300 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP Sbjct 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP 300 Query 301 LLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV 360 LLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV Sbjct 301 LLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAV 360 Query 361 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGP 420 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLP SWGP Sbjct 361 EPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPRSWGP 420 Query 421 DLVGVAGDGGLVSV 434 DLVGVAGDGGLVSV Sbjct 421 DLVGVAGDGGLVSV 434 >gi|289755136|ref|ZP_06514514.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289695723|gb|EFD63152.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=434 Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/436 (97%), Positives = 422/436 (97%), Gaps = 4/436 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAAT MSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATAMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPA-VAWVWFQ-LFVDI 238 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYL P + W+ F LFVDI Sbjct 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLVRFC--FPNFLRWLGFGFLFVDI 238 Query 239 LGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLG 298 LGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLG Sbjct 239 LGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLG 298 Query 299 GPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVS 358 GPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVS Sbjct 299 GPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVS 358 Query 359 AVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSW 418 AVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSW Sbjct 359 AVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSW 418 Query 419 GPDLVGVAGDGGLVSV 434 GPDLVGVAGDGGLVSV Sbjct 419 GPDLVGVAGDGGLVSV 434 >gi|298526488|ref|ZP_07013897.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] gi|298496282|gb|EFI31576.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] Length=360 Score = 635 bits (1639), Expect = 4e-180, Method: Compositional matrix adjust. Identities = 339/341 (99%), Positives = 340/341 (99%), Gaps = 0/341 (0%) Query 44 VAQELSVVVAAVGAGVWQGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCA 103 +AQELS VVAAVGAGVWQGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCA Sbjct 1 MAQELSAVVAAVGAGVWQGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCA 60 Query 104 LAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGA 163 LAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGA Sbjct 61 LAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGA 120 Query 164 ALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSE 223 ALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSE Sbjct 121 ALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSE 180 Query 224 LPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVV 283 LPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVV Sbjct 181 LPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVV 240 Query 284 EWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVA 343 EWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVA Sbjct 241 EWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVA 300 Query 344 PVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFV 384 PVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFV Sbjct 301 PVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFV 341 >gi|15842579|ref|NP_337616.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13882892|gb|AAK47430.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=310 Score = 585 bits (1508), Expect = 5e-165, Method: Compositional matrix adjust. Identities = 305/306 (99%), Positives = 306/306 (100%), Gaps = 0/306 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG Sbjct 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP 300 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP Sbjct 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP 300 Query 301 LLGALA 306 LLGALA Sbjct 301 LLGALA 306 >gi|344220853|gb|AEN01484.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=312 Score = 575 bits (1481), Expect = 7e-162, Method: Compositional matrix adjust. Identities = 299/303 (99%), Positives = 300/303 (99%), Gaps = 0/303 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG Sbjct 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGP 300 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGG Sbjct 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGR 300 Query 301 LLG 303 G Sbjct 301 CWG 303 >gi|323718351|gb|EGB27527.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=298 Score = 573 bits (1477), Expect = 2e-161, Method: Compositional matrix adjust. Identities = 297/298 (99%), Positives = 298/298 (100%), Gaps = 0/298 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG Sbjct 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLG 298 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLG Sbjct 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLG 298 >gi|18202062|sp|O53268.2|PPE47_MYCTU RecName: Full=Uncharacterized PPE family protein PPE47/PPE48 Length=435 Score = 548 bits (1412), Expect = 6e-154, Method: Compositional matrix adjust. Identities = 355/435 (82%), Positives = 380/435 (88%), Gaps = 1/435 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFP+ E+ +FLE A+ + ++ A A + +L ++ Sbjct 181 GANEASNAVAAATITPFPFGELAKFLEMAAQAFTEVGELIMKSAEAWAVGFVELITGLVN 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIV-VEWVIGNLFGVVPLLGG 299 F + + FA+ + L +A+ + I+ + W+I N+FG +P+LGG Sbjct 241 FEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVLELAILSIGWIISNIFGAIPVLGG 300 Query 300 PLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSA 359 PLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSA Sbjct 301 PLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSA 360 Query 360 VEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWG 419 VEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWG Sbjct 361 VEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWG 420 Query 420 PDLVGVAGDGGLVSV 434 PDLVGVAGDGGLVSV Sbjct 421 PDLVGVAGDGGLVSV 435 >gi|31794199|ref|NP_856692.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121638904|ref|YP_979128.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991396|ref|YP_002646085.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] 7 more sequence titles Length=435 Score = 543 bits (1398), Expect = 3e-152, Method: Compositional matrix adjust. Identities = 349/435 (81%), Positives = 377/435 (87%), Gaps = 1/435 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELS VVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSAVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFP+ E+ +FLE A+ + ++ A A + +L ++ Sbjct 181 GANEASNAVAAATITPFPFGELAKFLEMAAQAFTEVGELIMKSAEAWAVGFVELITGLVN 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIV-VEWVIGNLFGVVPLLGG 299 F + + FA+ + L +A+ + I+ + W+I N+FG +P+L G Sbjct 241 FEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVLELAILSIGWIISNIFGAIPVLAG 300 Query 300 PLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSA 359 PLLGALAAAVVPGVAG+ G+AGLAA+PAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSA Sbjct 301 PLLGALAAAVVPGVAGVTGLAGLAAVPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSA 360 Query 360 VEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWG 419 VEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWG Sbjct 361 VEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWG 420 Query 420 PDLVGVAGDGGLVSV 434 PDLVGVAGDGGLVSV Sbjct 421 PDLVGVAGDGGLVSV 435 >gi|15842584|ref|NP_337621.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|148662873|ref|YP_001284396.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148824212|ref|YP_001288966.1| PPE family protein [Mycobacterium tuberculosis F11] 17 more sequence titles Length=435 Score = 543 bits (1398), Expect = 3e-152, Method: Compositional matrix adjust. Identities = 350/435 (81%), Positives = 378/435 (87%), Gaps = 1/435 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFP+ E+ +FLE A+ + ++ A A + +L ++ Sbjct 181 GANEASNAVAAATITPFPFGELAKFLEMAAQAFTEVGELIMKSAEAWAVGFVELITGLVN 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIV-VEWVIGNLFGVVPLLGG 299 F + + FA+ + L +A+ + I+ + W+I N+FG +P+L G Sbjct 241 FEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVLELAILSIGWIISNIFGAIPVLAG 300 Query 300 PLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSA 359 PLLGALAAAVVPGVAG+ G+AGLAA+PAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSA Sbjct 301 PLLGALAAAVVPGVAGVTGLAGLAAVPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSA 360 Query 360 VEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWG 419 VEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWG Sbjct 361 VEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWG 420 Query 420 PDLVGVAGDGGLVSV 434 PDLVGVAGDGGLVSV Sbjct 421 PDLVGVAGDGGLVSV 435 >gi|308369932|ref|ZP_07419565.2| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308372320|ref|ZP_07667350.1| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308373603|ref|ZP_07433020.2| PPE family protein [Mycobacterium tuberculosis SUMu005] 9 more sequence titles Length=431 Score = 536 bits (1380), Expect = 3e-150, Method: Compositional matrix adjust. Identities = 346/431 (81%), Positives = 374/431 (87%), Gaps = 1/431 (0%) Query 5 VWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGPS 64 +WLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGPS Sbjct 1 MWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGPS 60 Query 65 AELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVLV 124 AELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVLV Sbjct 61 AELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVLV 120 Query 125 ATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGANE 184 ATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGANE Sbjct 121 ATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGANE 180 Query 185 ASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNII 244 ASNAVAAATITPFP+ E+ +FLE A+ + ++ A A + +L ++ F Sbjct 181 ASNAVAAATITPFPFGELAKFLEMAAQAFTEVGELIMKSAEAWAVGFVELITGLVNFEPW 240 Query 245 GFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIV-VEWVIGNLFGVVPLLGGPLLG 303 + + FA+ + L +A+ + I+ + W+I N+FG +P+L GPLLG Sbjct 241 LVLTGMIDMFFATVGFALGVFVLVPLLEFAVVLELAILSIGWIISNIFGAIPVLAGPLLG 300 Query 304 ALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPA 363 ALAAAVVPGVAG+ G+AGLAA+PAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPA Sbjct 301 ALAAAVVPGVAGVTGLAGLAAVPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPA 360 Query 364 PASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLV 423 PASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLV Sbjct 361 PASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLV 420 Query 424 GVAGDGGLVSV 434 GVAGDGGLVSV Sbjct 421 GVAGDGGLVSV 431 >gi|254233098|ref|ZP_04926425.1| PPE family protein [Mycobacterium tuberculosis C] gi|124602157|gb|EAY61167.1| PPE family protein [Mycobacterium tuberculosis C] Length=427 Score = 527 bits (1358), Expect = 1e-147, Method: Compositional matrix adjust. Identities = 341/426 (81%), Positives = 369/426 (87%), Gaps = 1/426 (0%) Query 10 PPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGPSAELFV 69 PPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGPSAELFV Sbjct 2 PPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGPSAELFV 61 Query 70 AAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVLVATNFF 129 AAYVPYVAWLVQAS+DSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVLVATNFF Sbjct 62 AAYVPYVAWLVQASSDSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVLVATNFF 121 Query 130 GINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGANEASNAV 189 GINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGANEASNAV Sbjct 122 GINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGANEASNAV 181 Query 190 AAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNIIGFIIT 249 AAATITPFP+ E+ +FLE A+ + ++ A A + +L ++ F + Sbjct 182 AAATITPFPFGELAKFLEMAAQAFTEVGELIMKSAEAWAVGFVELITGLVNFEPWLVLTG 241 Query 250 LASNAQLLTEFAINASYVAVGLLYAIAGVIDIV-VEWVIGNLFGVVPLLGGPLLGALAAA 308 + FA+ + L +A+ + I+ + W+I N+FG +P+L GPLLGALAAA Sbjct 242 MIDMFFATVGFALGVFVLVPLLEFAVVLELAILSIGWIISNIFGAIPVLAGPLLGALAAA 301 Query 309 VVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPAPASTS 368 VVPGVAG+ G+AGLAA+PAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPAPASTS Sbjct 302 VVPGVAGVTGLAGLAAVPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPAPASTS 361 Query 369 VSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLVGVAGD 428 VSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLVGVAGD Sbjct 362 VSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWGPDLVGVAGD 421 Query 429 GGLVSV 434 GGLVSV Sbjct 422 GGLVSV 427 >gi|340628014|ref|YP_004746466.1| ppe family protein [Mycobacterium canettii CIPT 140010059] gi|340006204|emb|CCC45378.1| ppe family protein [Mycobacterium canettii CIPT 140010059] Length=434 Score = 523 bits (1346), Expect = 3e-146, Method: Compositional matrix adjust. Identities = 335/435 (78%), Positives = 365/435 (84%), Gaps = 2/435 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELS VVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSAVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALA MPTLPELA NHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAAMPTLPELAVNHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAAT MSAYEAVVGAALVATPHTGPAP+IVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATAMSAYEAVVGAALVATPHTGPAPIIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFP+ E+ +FLE A+ + ++ A A + +L ++ Sbjct 181 GANEASNAVAAATITPFPFGELAKFLEMAAQAFTEVGELIMKSAEAWAVGFVELITGLVN 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIV-VEWVIGNLFGVVPLLGG 299 F + + FA+ + L +A+ + I+ + W+I N+FG +P+L G Sbjct 241 FEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVLELAILSIGWIISNIFGAIPVLAG 300 Query 300 PLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSA 359 PLLGALAAAVVPGVAG+ G+AGLAA+ AA APAALVGSVAPVSGGVVSPQARLVSA Sbjct 301 PLLGALAAAVVPGVAGVTGLAGLAAV-PAVGAAAAPAALVGSVAPVSGGVVSPQARLVSA 359 Query 360 VEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPMLPGSWG 419 VEPA ASTS SVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGA VPMLPGSWG Sbjct 360 VEPAAASTSGSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGARVPMLPGSWG 419 Query 420 PDLVGVAGDGGLVSV 434 PDLVGVAGDGGLV+V Sbjct 420 PDLVGVAGDGGLVTV 434 >gi|306777315|ref|ZP_07415652.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308214323|gb|EFO73722.1| PPE family protein [Mycobacterium tuberculosis SUMu001] Length=270 Score = 504 bits (1298), Expect = 1e-140, Method: Compositional matrix adjust. Identities = 269/270 (99%), Positives = 270/270 (100%), Gaps = 0/270 (0%) Query 160 VVGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSA 219 +VGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSA Sbjct 1 MVGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSA 60 Query 220 LLSELPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVI 279 LLSELPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVI Sbjct 61 LLSELPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVI 120 Query 280 DIVVEWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALV 339 DIVVEWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALV Sbjct 121 DIVVEWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALV 180 Query 340 GSVAPVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLT 399 GSVAPVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLT Sbjct 181 GSVAPVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLT 240 Query 400 VLADEFGDGAPVPMLPGSWGPDLVGVAGDG 429 VLADEFGDGAPVPMLPGSWGPDLVGVAGDG Sbjct 241 VLADEFGDGAPVPMLPGSWGPDLVGVAGDG 270 >gi|323718358|gb|EGB27533.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=380 Score = 464 bits (1194), Expect = 1e-128, Method: Compositional matrix adjust. Identities = 296/380 (78%), Positives = 323/380 (85%), Gaps = 1/380 (0%) Query 56 GAGVWQGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAA 115 GAGVWQGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAA Sbjct 1 GAGVWQGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAA 60 Query 116 NHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAP 175 NHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAP Sbjct 61 NHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAP 120 Query 176 VIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLF 235 VIVKPGANEASNAVAAATITPFP+ E+ +FLE A+ + ++ A A + +L Sbjct 121 VIVKPGANEASNAVAAATITPFPFGELAKFLEMAAQAFTEVGELIMKSAEAWAVGFVELI 180 Query 236 VDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIV-VEWVIGNLFGVV 294 ++ F + + FA+ + L +A+ + I+ + W+I N+FG + Sbjct 181 TGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVLELAILSIGWIISNIFGAI 240 Query 295 PLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQA 354 P+L GPLLGALAAAVVPGVAG+ G+AGLAA+PAVGAAAGAPAALVGSVAPVSGGVVSPQA Sbjct 241 PVLAGPLLGALAAAVVPGVAGVTGLAGLAAVPAVGAAAGAPAALVGSVAPVSGGVVSPQA 300 Query 355 RLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPML 414 RLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPML Sbjct 301 RLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFGDGAPVPML 360 Query 415 PGSWGPDLVGVAGDGGLVSV 434 PGSWGPDLVGVAGDGGLVSV Sbjct 361 PGSWGPDLVGVAGDGGLVSV 380 >gi|57117048|ref|YP_177920.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|7478802|pir||H70857 probable PPE protein - Mycobacterium tuberculosis (strain H37RV) gi|41352777|emb|CAE55541.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=358 Score = 425 bits (1093), Expect = 7e-117, Method: Compositional matrix adjust. Identities = 259/340 (77%), Positives = 283/340 (84%), Gaps = 9/340 (2%) Query 100 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 159 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA Sbjct 23 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 82 Query 160 VVGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSA 219 VVGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFP+ E+ +FLE A+ + Sbjct 83 VVGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPFGELAKFLEMAAQAFTEVGEL 142 Query 220 LLSELPAVAWVWFQLFVDILGFN----IIGFIITLASNAQLLTEFAINASYVAVGLLYAI 275 ++ A A + +L ++ F + G I + FA+ + L +A+ Sbjct 143 IMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVG----FALGVFVLVPLLEFAV 198 Query 276 AGVIDIV-VEWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGA 334 + I+ + W+I N+FG +P+LGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGA Sbjct 199 VLELAILSIGWIISNIFGAIPVLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGA 258 Query 335 PAALVGSVAPVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQ 394 PAALVGSVAPVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQ Sbjct 259 PAALVGSVAPVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQ 318 Query 395 PAGLTVLADEFGDGAPVPMLPGSWGPDLVGVAGDGGLVSV 434 PAGLTVLADEFGDGAPVPMLPGSWGPDLVGVAGDGGLVSV Sbjct 319 PAGLTVLADEFGDGAPVPMLPGSWGPDLVGVAGDGGLVSV 358 >gi|339295856|gb|AEJ47967.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=358 Score = 417 bits (1072), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 253/340 (75%), Positives = 280/340 (83%), Gaps = 9/340 (2%) Query 100 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 159 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA Sbjct 23 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 82 Query 160 VVGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSA 219 VVGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFP+ E+ +FLE A+ + Sbjct 83 VVGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPFGELAKFLEMAAQAFTEVGEL 142 Query 220 LLSELPAVAWVWFQLFVDILGFN----IIGFIITLASNAQLLTEFAINASYVAVGLLYAI 275 ++ A A + +L ++ F + G I + FA+ + L +A+ Sbjct 143 IMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVG----FALGVFVLVPLLEFAV 198 Query 276 AGVIDIV-VEWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGA 334 + I+ + W+I N+FG +P+L GPLLGALAAAVVPGVAG+ G+AGLAA+PAVGAAAGA Sbjct 199 VLELAILSIGWIISNIFGAIPVLAGPLLGALAAAVVPGVAGVTGLAGLAAVPAVGAAAGA 258 Query 335 PAALVGSVAPVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQ 394 PAALVGSVAPVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQ Sbjct 259 PAALVGSVAPVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQ 318 Query 395 PAGLTVLADEFGDGAPVPMLPGSWGPDLVGVAGDGGLVSV 434 PAGLTVLADEFGDGAPVPMLPG WGPDLVGVAGDGGLVSV Sbjct 319 PAGLTVLADEFGDGAPVPMLPGGWGPDLVGVAGDGGLVSV 358 >gi|289571220|ref|ZP_06451447.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289544974|gb|EFD48622.1| PPE family protein [Mycobacterium tuberculosis T17] Length=208 Score = 380 bits (976), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 207/208 (99%), Positives = 208/208 (100%), Gaps = 0/208 (0%) Query 227 VAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWV 286 +AWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWV Sbjct 1 MAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWV 60 Query 287 IGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVS 346 IGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVS Sbjct 61 IGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVS 120 Query 347 GGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFG 406 GGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFG Sbjct 121 GGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLADEFG 180 Query 407 DGAPVPMLPGSWGPDLVGVAGDGGLVSV 434 DGAPVPMLPGSWGPDLVGVAGDGGLVSV Sbjct 181 DGAPVPMLPGSWGPDLVGVAGDGGLVSV 208 >gi|344220856|gb|AEN01487.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=375 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 235/317 (75%), Positives = 261/317 (83%), Gaps = 1/317 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILG 240 GANEASNAVAAATITPFP+ E+ +FLE A+ + ++ A A + +L ++ Sbjct 181 GANEASNAVAAATITPFPFGELAKFLEMAAQAFTEVGELIMKSAEAWAVGFVELITGLVN 240 Query 241 FNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIV-VEWVIGNLFGVVPLLGG 299 F + + FA+ + L +A+ + I+ + W+I N+FG +P+L G Sbjct 241 FEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVLELAILSIGWIISNIFGAIPVLAG 300 Query 300 PLLGALAAAVVPGVAGL 316 PLLGALAAAVVPGVAG+ Sbjct 301 PLLGALAAAVVPGVAGV 317 >gi|240173310|ref|ZP_04751968.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=448 Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 237/440 (54%), Positives = 285/440 (65%), Gaps = 17/440 (3%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAP+W+ASPPEVHSALLSAG GP L AA+A W++LSAEYA A+EL++++AAV AG W Sbjct 1 MTAPLWMASPPEVHSALLSAGAGPAPLLAASAAWTSLSAEYAGAAEELTLILAAVQAGAW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPS E +VAA+VPYVAWL+Q SADSAA A H+ AA YV ALA MPTL ELAANH+TH Sbjct 61 QGPSVEAYVAAHVPYVAWLMQTSADSAATAAGHDTVAAAYVSALAAMPTLAELAANHVTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 VLVATNFFGINTIPIALNEADYVRMW+QAAT M YE V GAALV+TPH PAPV+VKP Sbjct 121 GVLVATNFFGINTIPIALNEADYVRMWIQAATTMGVYETVSGAALVSTPHITPAPVLVKP 180 Query 181 GANEASNAVAAA--TITPFPWHEIVQFLEETFAAYDQYLSALLS-ELPAVAWVWFQLFVD 237 G EA +A A A T+TPFPW+++ QFLE A+ Q L++ V W + L Sbjct 181 GVGEAGSAAATAGQTLTPFPWNQLHQFLELFMKAWTQIGQLLVNAAFSFVLWS-YNLIQA 239 Query 238 ILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLL 297 ++ N G + + T FAI + + L + V+D++ W+IGNLFGV LL Sbjct 240 LVNLNFWGALEAVIMLVLTETWFAIGVMLIPLLLSALVLEVVDVIGSWIIGNLFGVGSLL 299 Query 298 GGPLLGALAAAVVPGVAGLAGVAGLA------------ALPAVGAAAGAPAALVGSVAPV 345 G GALAAAVVPGVAG+AG+AGL A A A A A Sbjct 300 MGTAAGALAAAVVPGVAGVAGLAGLTAMPAAAAVAAPAAGLAAAPAVAVAAVEPAPDAAA 359 Query 346 SGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLAD-E 404 + + ARLVS V+P S ASDRGA GF GTAGKE VGQP GLT L E Sbjct 360 AAVGAAEPARLVSTVQPGSGIAPASASASDRGAATFGFAGTAGKEIVGQPGGLTALQGAE 419 Query 405 FGDGAPVPMLPGSWGPDLVG 424 +G A +PMLP +W P +G Sbjct 420 YGGAAHLPMLPATWEPSALG 439 >gi|307081148|ref|ZP_07490318.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308361137|gb|EFP49988.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] Length=290 Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 203/215 (95%), Positives = 208/215 (97%), Gaps = 0/215 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 7 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 66 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 67 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 126 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 127 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 186 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQ 215 GANEASNAVAAATITPFP+ E+ +FLE A+ + Sbjct 187 GANEASNAVAAATITPFPFGELAKFLEMAAQAFTE 221 >gi|306973438|ref|ZP_07486099.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308357185|gb|EFP46036.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] Length=299 Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 203/215 (95%), Positives = 208/215 (97%), Gaps = 0/215 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 7 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 66 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 67 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 126 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 127 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 186 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQ 215 GANEASNAVAAATITPFP+ E+ +FLE A+ + Sbjct 187 GANEASNAVAAATITPFPFGELAKFLEMAAQAFTE 221 >gi|306777323|ref|ZP_07415660.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308214316|gb|EFO73715.1| PPE family protein [Mycobacterium tuberculosis SUMu001] Length=283 Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 203/215 (95%), Positives = 208/215 (97%), Gaps = 0/215 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 7 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 66 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 67 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 126 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP Sbjct 127 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 186 Query 181 GANEASNAVAAATITPFPWHEIVQFLEETFAAYDQ 215 GANEASNAVAAATITPFP+ E+ +FLE A+ + Sbjct 187 GANEASNAVAAATITPFPFGELAKFLEMAAQAFTE 221 >gi|289448696|ref|ZP_06438440.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289421654|gb|EFD18855.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=327 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 224/309 (73%), Positives = 251/309 (82%), Gaps = 1/309 (0%) Query 56 GAGVWQGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAA 115 G GVWQGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAA Sbjct 8 GPGVWQGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAA 67 Query 116 NHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAP 175 NHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAP Sbjct 68 NHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAP 127 Query 176 VIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLF 235 VIVKPGANEASNAVAAATITPFP+ E+ +FLE A+ + ++ A A + +L Sbjct 128 VIVKPGANEASNAVAAATITPFPFGELAKFLEMAAQAFTEVGELIMKSAEAWAVGFVELI 187 Query 236 VDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIV-VEWVIGNLFGVV 294 ++ F + + FA+ + L +A+ + I+ + W+I N+FG + Sbjct 188 TGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVLELAILSIGWIISNIFGAI 247 Query 295 PLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQA 354 P+L GPLLGALAAAVVPGVAG+ G+AGLAA+PAVGAAAGAPAALVGSVAPVSGGVVSPQA Sbjct 248 PVLAGPLLGALAAAVVPGVAGVTGLAGLAAVPAVGAAAGAPAALVGSVAPVSGGVVSPQA 307 Query 355 RLVSAVEPA 363 RLVSAVEPA Sbjct 308 RLVSAVEPA 316 >gi|340628712|ref|YP_004747164.1| ppe family protein [Mycobacterium canettii CIPT 140010059] gi|340006902|emb|CCC46091.1| ppe family protein [Mycobacterium canettii CIPT 140010059] Length=398 Score = 295 bits (756), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 210/438 (48%), Positives = 262/438 (60%), Gaps = 48/438 (10%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAP+W ASPPEVHSALLSAGPGP SLQAAAA W++LSAEYA+ AQEL+ V+AAV G W Sbjct 1 MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 +GPSAE +VAA++PY+AWL ++SADSA A +HE Y ALA MPTL ELAANH +H Sbjct 61 EGPSAEAYVAAHLPYLAWLTKSSADSARLATQHEVMTTAYASALAAMPTLTELAANHTSH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE AAL + P T PAPV+ Sbjct 121 AVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALASAPQTTPAPVLFNG 180 Query 181 GANEASN--AVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDI 238 GA AS A++AAT+ P ++++ + + F + ++I Sbjct 181 GAGVASALPAISAATLDP---------------------ASIIGIIIEILIQLFLISLEI 219 Query 239 LGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAG--VIDIVVEWVI-GNLFGVVP 295 L F I+ + I + L+ I A + +L I G ++ I +V+ G++ V Sbjct 220 L-FAIVAYTIIIV----LILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPT 274 Query 296 LLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAP--VSGGVVSPQ 353 L L A+ V +A LA V A + A AP A+ AP V P Sbjct 275 SLSTSLSTAVPIGVGQYLADLASVDAQAIEVGLKTADVAPVAVRPGAAPPLRESAAVRPG 334 Query 354 ARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLA-DEFGDGAPVP 412 AR VSAV AS+RGAG LGF GTAGKESVG+PAGLT LA EFG VP Sbjct 335 ARPVSAV------------ASERGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGNPSVP 382 Query 413 MLPGSWGPDLVGVAGDGG 430 M+P SW LVG AG+ G Sbjct 383 MVPASW-EQLVG-AGEAG 398 >gi|581362|emb|CAA41961.1| dihydrofolate reductase [Mycobacterium tuberculosis] Length=214 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 155/194 (80%), Positives = 162/194 (84%), Gaps = 0/194 (0%) Query 160 VVGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSA 219 +VGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSA Sbjct 1 MVGAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSA 60 Query 220 LLSELPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVI 279 LLSELPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVI Sbjct 61 LLSELPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVI 120 Query 280 DIVVEWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALV 339 DIVVEWVIGNLFGV GG ++G + G + + G+ G LV Sbjct 121 DIVVEWVIGNLFGVASPFGGAVVGGVGRCCGSGCSWVGRGGGIGRSAGGGCGCWRAGGLV 180 Query 340 GSVAPVSGGVVSPQ 353 GSVAPVSGGVVSPQ Sbjct 181 GSVAPVSGGVVSPQ 194 >gi|306777322|ref|ZP_07415659.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308214317|gb|EFO73716.1| PPE family protein [Mycobacterium tuberculosis SUMu001] Length=263 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 178/263 (68%), Positives = 206/263 (79%), Gaps = 1/263 (0%) Query 165 LVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSEL 224 +VATPHTGPAPVIVKPGANEASNAVAAATITPFP+ E+ +FLE A+ + ++ Sbjct 1 MVATPHTGPAPVIVKPGANEASNAVAAATITPFPFGELAKFLEMAAQAFTEVGELIMKSA 60 Query 225 PAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIV-V 283 A A + +L ++ F + + FA+ + L +A+ + I+ + Sbjct 61 EAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVLELAILSI 120 Query 284 EWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVA 343 W+I N+FG +P+L GPLLGALAAAVVPGVAG+ G+AGLAA+PAVGAAAGAPAALVGSVA Sbjct 121 GWIISNIFGAIPVLAGPLLGALAAAVVPGVAGVTGLAGLAAVPAVGAAAGAPAALVGSVA 180 Query 344 PVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLAD 403 PVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLAD Sbjct 181 PVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLAD 240 Query 404 EFGDGAPVPMLPGSWGPDLVGVA 426 EFGDGAPVPMLPGSWGPDLVGVA Sbjct 241 EFGDGAPVPMLPGSWGPDLVGVA 263 >gi|289448692|ref|ZP_06438436.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289421650|gb|EFD18851.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=182 Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 173/176 (99%), Positives = 174/176 (99%), Gaps = 1/176 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPV 176 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALV T HTGPAPV Sbjct 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVHT-HTGPAPV 175 >gi|323718354|gb|EGB27529.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=144 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 143/144 (99%), Positives = 144/144 (100%), Gaps = 0/144 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNEADYV 144 AVLVATNFFGINTIPIALNEADYV Sbjct 121 AVLVATNFFGINTIPIALNEADYV 144 >gi|308380548|ref|ZP_07669214.1| hypothetical protein TMKG_04105 [Mycobacterium tuberculosis SUMu011] gi|308361145|gb|EFP49996.1| hypothetical protein TMKG_04105 [Mycobacterium tuberculosis SUMu011] Length=151 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 139/142 (98%), Positives = 139/142 (98%), Gaps = 0/142 (0%) Query 162 GAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALL 221 GAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALL Sbjct 1 GAALVATPHTGPAPVIVKPGANEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALL 60 Query 222 SELPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDI 281 SELPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDI Sbjct 61 SELPAVAWVWFQLFVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDI 120 Query 282 VVEWVIGNLFGVVPLLGGPLLG 303 VVEWVIGNLFGVVPLLGG G Sbjct 121 VVEWVIGNLFGVVPLLGGRCWG 142 >gi|240171402|ref|ZP_04750061.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=442 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 193/438 (45%), Positives = 251/438 (58%), Gaps = 46/438 (10%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 V+APVW+A PPEVHSALLSAGPGP SL AAA WS+LSAEY AVA EL+ VVAA+ W Sbjct 28 VSAPVWMAFPPEVHSALLSAGPGPASLIAAAQAWSSLSAEYGAVADELAPVVAALRTEAW 87 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 +G +AE VAAYVPY+AW++Q SAD A A HE AA Y ALA MPTL ELAANH TH Sbjct 88 RGTAAECCVAAYVPYLAWVMQESADCAQVAAVHEITAAAYQAALAAMPTLGELAANHATH 147 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVL+ATNFFG+N IPIA NEADY RMW+QAAT+M+ YE A+ +TPHT PAP I+KP Sbjct 148 AVLLATNFFGVNAIPIAFNEADYARMWMQAATIMNVYETTSSPAVASTPHTPPAPAIIKP 207 Query 181 GANEASNAVAAATITPFPWHEIVQ-FLEETFAAYDQYLSALLSELPAVAWVWFQLFVDIL 239 GA NA+ TITPFP +I+Q L+ +L++ + A+ ++ + + ++ Sbjct 208 GAGLV-NAI-ETTITPFPIWQILQILLDAVVGVLHCIRESLVATVLALLFIPLCVLLAVI 265 Query 240 GF---------NIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNL 290 +GFI+ LA + +F + A ++ + +A + ++V+ W +GNL Sbjct 266 ALLTGHVAMAEQFLGFIVNLAI---IPFQFFLEAGWI---FIVGLADICELVIAWFLGNL 319 Query 291 FGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALV---GSVAPVSG 347 +GGP +V +A ++G AAL VGA G AL S A ++ Sbjct 320 ----GFVGGP-------GLVTQLATTTALSGGAAL-GVGALKGTTVALELAPASFAAMAV 367 Query 348 GVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAGLTVLA-DEFG 406 G A SAV PA G +GF GT +V Q GLT L+ Sbjct 368 GADGSLATAGSAVSPA------------ELGGPVGFAGTITNGTVPQAGGLTTLSGHTCC 415 Query 407 DGAPVPMLPGSWGPDLVG 424 DG VPMLP W + G Sbjct 416 DGVQVPMLPSGWAQHVCG 433 >gi|306777316|ref|ZP_07415653.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308214318|gb|EFO73717.1| PPE family protein [Mycobacterium tuberculosis SUMu001] Length=140 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 139/140 (99%), Positives = 140/140 (100%), Gaps = 0/140 (0%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW Sbjct 1 MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH Sbjct 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 Query 121 AVLVATNFFGINTIPIALNE 140 AVLVATNFFGINTIPIALNE Sbjct 121 AVLVATNFFGINTIPIALNE 140 >gi|240168396|ref|ZP_04747055.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=429 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 216/448 (49%), Positives = 268/448 (60%), Gaps = 45/448 (10%) Query 4 PVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGP 63 P+W+A PPE+HSALLSAGPGP L AAAA WS+LSA+YA A+ELS+V+AAV AG WQGP Sbjct 4 PIWMACPPELHSALLSAGPGPAPLVAAAAQWSSLSAQYADTAEELSMVLAAVAAGAWQGP 63 Query 64 SAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVL 123 SAEL AAY PY+AWL+QAS D+A AA HEAAA Y ALA MPTL ELAANH THAVL Sbjct 64 SAELCAAAYAPYLAWLMQASTDTAGAAAAHEAAATAYTTALATMPTLGELAANHTTHAVL 123 Query 124 VATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGAN 183 +ATNFFGINTIPIALNE DYVRMW+QAA MS Y+ V AAL A PH PAPVI+KPG + Sbjct 124 LATNFFGINTIPIALNEVDYVRMWIQAAAAMSVYDEVSAAALAAAPHANPAPVILKPG-S 182 Query 184 EASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVWFQLFVDILGFNI 243 A A A +TPFP+ EI+ + ET ++ E W FV + I Sbjct 183 MAVAAAAQTALTPFPFLEILNLIVET----------IIGEAVMFVLFWASAFVLL----I 228 Query 244 IGFIITLASNAQLLTEFAINASYVAV----GLLYAIAGV-------------IDIVVEWV 286 ++ A A LL ++ + A +A+ ++ AI G + +++ W+ Sbjct 229 SPLLLVAAGAAVLLGDYTVAAYLLALPIAAPIIMAIMGTFFFLNPVLVFFQGVMLIINWI 288 Query 287 IGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVS 346 IGNL L GP AL+ G+A A A +A + A A V +V PV+ Sbjct 289 IGNL-----ALAGP---ALSTYFASGLAIPAAAASASAAVQLAEVAPVSAVAVDAVLPVA 340 Query 347 GG-VVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPA-GLTVLADE 404 G V QA+L SAV A + SVSV A ++ A +GF GT G PA GL + E Sbjct 341 GAPAVVSQAQLASAVS-AQSGASVSVTAGNQAANGIGFAGTL-TNGAGMPATGLAAIGAE 398 Query 405 FGDGAPVPMLPGSWGPDLVGVAGDGGLV 432 G GA +PMLP SW +VG GDGGL+ Sbjct 399 CG-GAQIPMLPASWEHGVVGALGDGGLI 425 >gi|183983621|ref|YP_001851912.1| PPE family protein [Mycobacterium marinum M] gi|183176947|gb|ACC42057.1| PPE family protein [Mycobacterium marinum M] Length=453 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 185/454 (41%), Positives = 247/454 (55%), Gaps = 46/454 (10%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TA VW+ASPPEVHSALLSAGPGPG L AA W+ALSAE+A+VA+EL+ ++ A W Sbjct 1 MTASVWMASPPEVHSALLSAGPGPGPLYEAATAWTALSAEHASVAEELTTLLGG-AAATW 59 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 +G SA+ +V A+ PY+AWL SAD AA A EHE AA Y ALA MPTL ELA NH TH Sbjct 60 EGTSAQSYVDAHAPYLAWLTTTSADYAATAAEHEVAAGAYTSALATMPTLAELAVNHTTH 119 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 LVATNFFG+NTIPI LNEADY RMW+QAAT MSAY+ + G L + PHT PAP ++K Sbjct 120 TALVATNFFGLNTIPITLNEADYARMWIQAATTMSAYQVISGTTLASMPHTTPAPPVLKA 179 Query 181 GANEASNAVAAATITP--FPWHEIVQFLEETFAAYDQYLSALLSELPA--VAWVWFQLFV 236 + A++ A + F W I+ + A +++ +SEL A +A Q + Sbjct 180 EIGTLAGALSDALVPAPLFLWETILAII-AFIAKLAEFIYLFVSELIALLIAGELLQALM 238 Query 237 DILGF--------------NIIGFI----------ITLASNAQLLTEFAINASYVAVGLL 272 ++G NII + + LA + FA+ + G Sbjct 239 FVIGTVAFVVWALATVVIENIIPIMIALLAAAIAPVPLALAVAASSPFAVATACALTGTE 298 Query 273 YAIAGVIDIVVEWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAA 332 ++ DI + NL ++ L P + V P AGLA A+ V A Sbjct 299 RGLSAAFDIDIA---QNLPFLLSLYAQP----ASVGVPPADAGLAT----ASAKPVAAHT 347 Query 333 GAPAALVGSVAPVSGG----VVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAG 388 GA S A S G V+P+ARLV+ A +T+ + +A + + A GF GT Sbjct 348 GAKPLWDSSSAVASAGDGPPSVAPEARLVATSTLAHPNTTATTVACQQDSKAPGFAGTLS 407 Query 389 KESVGQPAGLTVL-ADEFGDGAPVPMLPGSWGPD 421 +S PAG+TVL +++F D +PMLP SW D Sbjct 408 AKSHASPAGVTVLESNDFSDSPRLPMLPNSWDTD 441 >gi|240168498|ref|ZP_04747157.1| PPE family protein, PPE4 [Mycobacterium kansasii ATCC 12478] Length=420 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 135/226 (60%), Positives = 166/226 (74%), Gaps = 3/226 (1%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVW+ASPPEVHS+LLS+GPGPG L AAA W+++SAEYA+VA+EL+ ++ V G W Sbjct 1 MTAPVWIASPPEVHSSLLSSGPGPGPLLVAAASWTSISAEYASVAEELTALLGGVQIGAW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 +GPSAE+F AA+VPY+AWL++ASADSA A +HE AA Y ALA MPTLPELAANH H Sbjct 61 RGPSAEVFAAAHVPYLAWLLRASADSAGVAAQHEVAATAYTGALAAMPTLPELAANHAVH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVL+ATNFFGINTIPIALNE DY+RMW+QAAT MS Y A V AL + PH PAP +VKP Sbjct 121 AVLLATNFFGINTIPIALNEGDYLRMWIQAATAMSIYHAAVDTALASVPHATPAPPLVKP 180 Query 181 GANEASNAVAAAT---ITPFPWHEIVQFLEETFAAYDQYLSALLSE 223 G A +A A + + PW+ I L+E AY + +L E Sbjct 181 GVGSAGDAAATSVQSAVGDIPWNLIWALLKEVAEAYLAFNVWVLKE 226 >gi|289748258|ref|ZP_06507636.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289688845|gb|EFD56274.1| PPE family protein [Mycobacterium tuberculosis T92] Length=410 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 131/198 (67%), Positives = 154/198 (78%), Gaps = 2/198 (1%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAP+W ASPPEVHSALLSAGPGP SLQAAAA W++LSAEYA+ AQEL+ V+AAV G W Sbjct 1 MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 +GPSAE +VAA++PY+AWL ++SADSA A +HE Y ALA MPTL ELAANH +H Sbjct 61 EGPSAEAYVAAHLPYLAWLTKSSADSARLATQHEVMTTAYASALAAMPTLTELAANHTSH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE AAL + P T PAPV+ Sbjct 121 AVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALASAPQTTPAPVLFNG 180 Query 181 GANEASN--AVAAATITP 196 GA AS A++AAT+ P Sbjct 181 GAGVASALPAISAATLDP 198 >gi|240169845|ref|ZP_04748504.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=430 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 211/439 (49%), Positives = 255/439 (59%), Gaps = 41/439 (9%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +T P W A+PPEVHSALL AGPGPGSL AA W+ LSA YA+VA+EL+ V+A + AG+W Sbjct 1 MTTPGWSAAPPEVHSALLCAGPGPGSLLVAAETWTTLSAAYASVAEELTAVLAGMQAGMW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 GP+AE VAAY PY AWL+QASADSA AA HEAAA YV ALA MPTL ELAANH TH Sbjct 61 DGPTAECCVAAYAPYAAWLLQASADSAQAAAAHEAAATAYVSALATMPTLAELAANHATH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVLVATNFFG+NTIPIALNEADYVRMWVQAAT MS YE A L + P T PAPVIVKP Sbjct 121 AVLVATNFFGLNTIPIALNEADYVRMWVQAATTMSVYEMSTAALLSSVPCTSPAPVIVKP 180 Query 181 GANEASNAVAAATITPFPWHE---------IVQFLEETFAAYDQYLSALLSELPAVAWVW 231 GA A N VA A P P + ++ A ++ +L L + +W Sbjct 181 GAAIAGN-VARAAALPDPIDRLLNELLLLIVSEWFNSVLAIFESFLLILWGPEFFIKALW 239 Query 232 FQL-------FVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVIDIVVE 284 F L V + + +I + L+ Q+LT+ I +AG I +E Sbjct 240 FLLTGHFGAALVLLENYLLIWYFFPLSLAWQVLTDPLI------------VAGAI---LE 284 Query 285 WVIGNL-FGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSVA 343 W++G FG++P L + G +A + A + VA L A PA G A G L G+ A Sbjct 285 WILGGAGFGLIPALSTSVAGGMALSTATLAAADSSVAALTAAPAAGGAVGTLGPLAGASA 344 Query 344 PVSGGVVSPQARLVSAVEPAPA-STSVSVLASDRGAGALGFVGTAGKESVGQPAGL-TVL 401 V PQA LVSAV A S SV A+D+GA +GF GT + AGL T+ Sbjct 345 ------VLPQAPLVSAVTTGGAPGISASVAAADQGAAVMGFAGTVPAGAAVPAAGLATIG 398 Query 402 ADEFGDGAPVPMLPGSWGP 420 E GA VPMLP W P Sbjct 399 GAESAGGARVPMLPTGWEP 417 >gi|183985228|ref|YP_001853519.1| PPE family protein, PPE46 [Mycobacterium marinum M] gi|183178554|gb|ACC43664.1| PPE family protein, PPE46 [Mycobacterium marinum M] Length=428 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 187/442 (43%), Positives = 235/442 (54%), Gaps = 45/442 (10%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +T P+W+A PPEVHSALL AGPGPG + A+A W AL A YA A EL ++A V AG W Sbjct 1 MTMPIWIALPPEVHSALLYAGPGPGPIVASAQSWQALGASYAEEAAELEALLATVQAGPW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGPSA FV AY PY+AWL ASAD A A HEA AAGYV ALA MPTL EL ANH+ H Sbjct 61 QGPSAASFVGAYGPYLAWLTAASADCMARAATHEATAAGYVSALAAMPTLVELEANHVIH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 VL+ATNFFGINTIPIALNE+DY RMW+QAAT MS Y+A AA+ ATPHT AP I+KP Sbjct 121 GVLLATNFFGINTIPIALNESDYARMWIQAATTMSVYDAASAAAVAATPHTNHAPPILKP 180 Query 181 GA--NEASNAVAAATITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVW-FQL--- 234 GA + + W Q L+ Q +S L SE+ + AW + F L Sbjct 181 GASSLTSLPPPPSPPWWSIMW----QLLQTLADIVSQTVSQLASEVASFAWQFVFYLGQI 236 Query 235 --------------FVDILGFNIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAGVID 280 + IL I I+ QL+ + A+ ++ +A ++ Sbjct 237 VVAYGVMLLGYALQMMKILNLLIADLIVLALDQVQLVLMYLYITLRGAIAMVTLVADFLN 296 Query 281 IVVEWV---IGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAA 337 V+ + + + + LLG A A G GV+ L LP A AP Sbjct 297 KVLTTLSLGVEHAIAAIAQAIRELLGGAAMAFQAG-----GVSPL--LPQASALGNAPTG 349 Query 338 LVGSVAPVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGKESVGQPAG 397 +G P A LVSAV+ L+S A GF GTA ++S+ QP G Sbjct 350 AIGLAHSGVAAAALPNAHLVSAVQ----------LSSSGSMTAAGFAGTAPQQSIAQPVG 399 Query 398 LTVL-ADEFGDGAPVPMLPGSW 418 L+ L A FG AP+P+LP +W Sbjct 400 LSTLSAGSFGADAPLPLLPSTW 421 >gi|289445339|ref|ZP_06435083.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289418297|gb|EFD15498.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=410 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 130/198 (66%), Positives = 153/198 (78%), Gaps = 2/198 (1%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAP+W ASPPEVHSAL SAGPGP SLQAAAA W++LSAEYA+ AQEL+ V+AAV G W Sbjct 1 MTAPIWFASPPEVHSALRSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 +GPSAE +VAA++PY+AWL ++SADSA A +HE Y ALA MPTL ELAANH +H Sbjct 61 EGPSAEAYVAAHLPYLAWLTKSSADSARLATQHEVMTTAYASALAAMPTLTELAANHTSH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 AVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE AAL + P T PAPV+ Sbjct 121 AVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALASAPQTTPAPVLFNG 180 Query 181 GANEASN--AVAAATITP 196 GA AS A++AAT+ P Sbjct 181 GAGVASALPAISAATLDP 198 >gi|289441176|ref|ZP_06430920.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289414095|gb|EFD11335.1| PPE family protein [Mycobacterium tuberculosis T46] Length=427 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 130/196 (67%), Positives = 152/196 (78%), Gaps = 2/196 (1%) Query 3 APVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQG 62 AP+W ASPPEVHSALLSAGPGP SLQAAAA W++LSAEYA+ AQEL+ V+AAV G W+G Sbjct 20 APIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAWEG 79 Query 63 PSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAV 122 PSAE +VAA++PY+AWL ++SADSA A +HE Y ALA MPTL ELAANH +HAV Sbjct 80 PSAEAYVAAHLPYLAWLTKSSADSARLATQHEVMTTAYASALAAMPTLTELAANHTSHAV 139 Query 123 LVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGA 182 L+ TNFFGINTIPIALNEADY RMW+QAAT MS YE AAL + P T PAPV+ GA Sbjct 140 LLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALASAPQTTPAPVLFNGGA 199 Query 183 NEASN--AVAAATITP 196 AS A++AAT+ P Sbjct 200 GVASALPAISAATLDP 215 >gi|240168963|ref|ZP_04747622.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=443 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 212/449 (48%), Positives = 263/449 (59%), Gaps = 40/449 (8%) Query 3 APVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQG 62 APVWLASPPEVHSALLSAGPG L AAAA W++L +YA+VA+EL+ V+ A+ G WQG Sbjct 11 APVWLASPPEVHSALLSAGPGAAPLLAAAAEWASLGVDYASVAEELTAVLGALRTGAWQG 70 Query 63 PSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAV 122 P+AE+ AY PYVAWLVQAS+DSAA + H+A AA YV A+A MPTLPELAANH THAV Sbjct 71 PTAEMCAGAYGPYVAWLVQASSDSAAVSAAHQAVAAAYVSAVAAMPTLPELAANHATHAV 130 Query 123 LVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGA 182 L+ATNFFGINTIPIALNEADYVRMW+QAAT MS Y+AV AA+ + PHT PAP+I+KPGA Sbjct 131 LLATNFFGINTIPIALNEADYVRMWIQAATTMSIYDAVTAAAMASMPHTPPAPIIIKPGA 190 Query 183 NEASNAVAAA----TITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVA-WVWFQLFVD 237 A VA A + PFP I Q L + + A +PA+A + F Sbjct 191 GLAGEIVAGAAHAISYEPFP---IWQILWDLIKVVGTEILA----VPALAIFTLMMAFYT 243 Query 238 ILGFNIIGFIITLASNAQLLTE--FAINASYVAVGLL------------YAIAG-VIDIV 282 + +G+++ L N L E + +++ VG+ Y + VI + Sbjct 244 PIVLLFVGYLL-LIGNTHLALEALTYLELAWLTVGIETFATVFLPFVFGYEVGNLVIQWI 302 Query 283 VEWVIGNLFGVVPLLGGPLLGALAAAVVPGVAGLAGVAGLAALPAVGAAAGAPAALVGSV 342 +W++G G++P L GP+ A A V A + VAGL A P G A A Sbjct 303 SQWIMGLNLGMLPTLLGPVAAATALPVSAAAANSSAVAGLVAPPVAGVAVSA-------- 354 Query 343 APVSGGVVSPQARLVSAVEPAPASTS-VSVLASDRGAGALGFVGTAGKESVGQPAGLTVL 401 V V PQA+LVS S + V V ASD GAGALGF G A AGL L Sbjct 355 --VEPSAVLPQAQLVSVATAGSCSQAPVPVAASDHGAGALGFAGNAPSGGAAHAAGLATL 412 Query 402 -ADEFGDGAPVPMLPGSWGPDLVGVAGDG 429 +E G G +PMLP W LVG+ G Sbjct 413 GGNESGSGPQLPMLPNCWNASLVGLTNVG 441 >gi|240168835|ref|ZP_04747494.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=392 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 179/421 (43%), Positives = 229/421 (55%), Gaps = 39/421 (9%) Query 13 VHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGPSAELFVAAY 72 +HSALLS+G GPG L AAA W+ALS EYA+VA+EL+ V+A V AG WQGPS + A+ Sbjct 1 MHSALLSSGAGPGPLHEAAAAWTALSDEYASVAEELTAVLATVEAGAWQGPSGRWYADAH 60 Query 73 VPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVLVATNFFGIN 132 +PY+AWLV+ S D A A +HE AA YV AL MPT ELA NH HAVLVATNFFGIN Sbjct 61 LPYLAWLVETSVDGARLAAQHEVVAAAYVSALDAMPTPAELAGNHAMHAVLVATNFFGIN 120 Query 133 TIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGANEASNAVAAA 192 TIPIALNEADY RMW QAAT M YEAV G AL + P PAPV+VKP + A A+A Sbjct 121 TIPIALNEADYARMWAQAATTMCVYEAVAGTALASVPPATPAPVVVKPDVVSGAEAAASA 180 Query 193 TITPFPWHEIVQFLEETFAAYDQYLSALLSELPAVAWVW-FQLFVDILGFNIIGFIITLA 251 + PWH + + + ++ L ++ A W F V ++ ++ I Sbjct 181 AVG-VPWHLLEAVVMDLMRVWE------LCQVCTDADTWSFHEAVMLMVHPVVNKI---- 229 Query 252 SNAQLLTEFAINASYVAVGLLYAIAGVIDIVVEWVIGNLFGVVPLLGGPLLGALAAAVVP 311 N L+ FA + +LY++A F P+LG + GA ++ Sbjct 230 -NDLLVDPFATFLKWAP--MLYSLA-----------YQAFQTWPMLGAVIAGATGGSIAL 275 Query 312 GVAGLAGVAGLAALPAVGAAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPAPASTSVSV 371 AG+ LPA+G AAG A A + PQ ++ + P + S+SV Sbjct 276 PFGLSAGM-----LPAIGFAAGL-GAFPAVGAVAAPAAAIPQLGALAGLVPGASGASLSV 329 Query 372 LASDRGAGALGFVGTAGKESVGQPAGLT-----VLADEFGDGAPVPMLPGSWGPDLVGVA 426 +A GAG GF GT G + PAGLT V+ DEFG PMLP +W VG A Sbjct 330 VAP--GAGTSGFAGTHGTVASSSPAGLTHYASQVVGDEFGASTRAPMLPATWDAQGVGAA 387 Query 427 G 427 G Sbjct 388 G 388 >gi|296167589|ref|ZP_06849914.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897132|gb|EFG76743.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=311 Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 143/262 (55%), Positives = 178/262 (68%), Gaps = 13/262 (4%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAPVW+ASPPEVHS LLSAGPGPG L AAA W++LSAEYA A EL+ V+ AG W Sbjct 1 MTAPVWMASPPEVHSTLLSAGPGPGPLLAAAGAWTSLSAEYATAAAELTGVLGETQAGAW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 QGP+ ++AA+VPY+AWL QASADSA A +HE AAA Y ALA MPTL ELAANH H Sbjct 61 QGPTGAQYLAAHVPYLAWLQQASADSAGVAAQHEVAAAAYTAALAAMPTLGELAANHAVH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 VLVATNFFG+NTIPIA+NEADY RMWVQAATVM AY+A GAAL + P + PAP IV+P Sbjct 121 GVLVATNFFGVNTIPIAVNEADYARMWVQAATVMGAYQATSGAALASAPRSTPAPSIVRP 180 Query 181 GANEASNAVAAATITPFPW-----HEIVQFLEETFAAYDQYLSALLSELPA--------V 227 G + + + A TP W ++ +FL++ F Q L + LPA + Sbjct 181 GGDANTLSANTAQNTPGNWWQNLIQQLSKFLQDFFQNIQQMLQNFSANLPAFLAANGPLL 240 Query 228 AWVWFQLFVDILGFNIIGFIIT 249 +V +Q+F + +G+ G I+T Sbjct 241 FFVAYQVFFNAVGWPTWGAILT 262 >gi|240171575|ref|ZP_04750234.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=425 Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 204/447 (46%), Positives = 257/447 (58%), Gaps = 56/447 (12%) Query 1 VTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW 60 +TAP+W ASPPEVHSALLSAGPGP SL AAAAGWS+LSAEYA+VA+ELS V+ A+ A W Sbjct 1 MTAPIWFASPPEVHSALLSAGPGPSSLLAAAAGWSSLSAEYASVAEELSTVLGAIQAEAW 60 Query 61 QGPSAELFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTH 120 +GPS+ + V AY PYVAWL+QASADSAAAA HE+AA Y ALA MPT+ ELAANH TH Sbjct 61 RGPSSGICVGAYAPYVAWLMQASADSAAAAAAHESAAGAYATALASMPTMGELAANHATH 120 Query 121 AVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKP 180 A+LV TNFFGINTIPI LNEADYVRMW+QAAT MS YE AAL + PH PAPVI+K Sbjct 121 ALLVTTNFFGINTIPITLNEADYVRMWIQAATTMSVYEGFSAAALASAPHAPPAPVIIKS 180 Query 181 GANEASNAVAAAT---ITPFPWHEIVQFLEETFAAYD---QYLSALLSELPAVAWVWFQL 234 EASN A PFP ++ L ET + + + + ++ +W Sbjct 181 RTGEASNIAAIGQELGYDPFPLWSLLWGLVETMLIEIIGVPFFTLFVISVIILSPLWLFA 240 Query 235 FV--DILGF-----NIIGFIITLASNAQLLTEFAINASYVAVGLLYAIAG--VIDIVVEW 285 FV ++LG+ NI+ ++ LT FAI +A ++ + G + + V+ W Sbjct 241 FVLAELLGYSAFAANILQYLS--------LTWFAIAVMALAFMMMPFVLGYDIANAVIYW 292 Query 286 VIGNLFGVVPLLGGPL----------------LGALAAAVVPGVAGLAGVAGLAALPAVG 329 + G+V L PL ++AAV V G A V G+ L + Sbjct 293 ITHLSAGIVSTLASPLAAETALSASVAAAATNASTMSAAVAAPVTG-AAVGGVEPLTVMS 351 Query 330 AAAGAPAALVGSVAPVSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALGFVGTAGK 389 A++ A +A SGG SP + EPA +A++RG G GF GT K Sbjct 352 ASSAAT-----PMASASGG--SPGHHISGIAEPA--------MATERGVGTPGFAGTVSK 396 Query 390 ESVGQPAGL-TVLADEFGDGAPVPMLP 415 V Q AGL TV E G+ VPMLP Sbjct 397 GVVAQAAGLATVGGGELGEPPRVPMLP 423 >gi|342859230|ref|ZP_08715884.1| hypothetical protein MCOL_10138 [Mycobacterium colombiense CECT 3035] gi|342133471|gb|EGT86674.1| hypothetical protein MCOL_10138 [Mycobacterium colombiense CECT 3035] Length=488 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 137/256 (54%), Positives = 167/256 (66%), Gaps = 13/256 (5%) Query 7 LASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVWQGPSAE 66 +ASPPEVHSALLSAGPGPG L AAA W++LS +YA+ A ELS ++ AG W+GPSAE Sbjct 1 MASPPEVHSALLSAGPGPGPLLAAAGAWTSLSTQYASAAAELSGLLGEAQAGAWEGPSAE 60 Query 67 LFVAAYVPYVAWLVQASADSAAAAGEHEAAAAGYVCALAEMPTLPELAANHLTHAVLVAT 126 +VAA++PY+AWL QAS DSA AA + E AA Y ALA MPTL ELA NH HAVLV T Sbjct 61 QYVAAHLPYLAWLQQASVDSAGAAAQQEVAATAYTAALAAMPTLAELATNHTVHAVLVGT 120 Query 127 NFFGINTIPIALNEADYVRMWVQAATVMSAYEAVVGAALVATPHTGPAPVIVKPGANEAS 186 NFFGINTIPIA+NEADY RMWVQAAT M Y+AV G+AL A P T AP IV PG S Sbjct 121 NFFGINTIPIAVNEADYARMWVQAATTMGTYQAVSGSALAAAPRTMAAPAIVNPGGQINS 180 Query 187 NAVAAATITPFPW-----HEIVQFLEETFAAYDQYLSALLSELPA--------VAWVWFQ 233 A A +P W ++ +F ++ F Q L S LPA + +V +Q Sbjct 181 LASNATQNSPGDWWQNFIQQLSKFFQDFFQNIQQMLQNFFSNLPAFLAANGPLLFFVAYQ 240 Query 234 LFVDILGFNIIGFIIT 249 +F + +G+ G I+T Sbjct 241 VFFNAVGWPTWGAILT 256 Lambda K H 0.318 0.132 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 885232741974 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40