BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3020c Length=97 Score E Sequences producing significant alignments: (Bits) Value gi|289553189|ref|ZP_06442399.1| esat-6 like protein esxS [Mycoba... 186 7e-46 gi|15842583|ref|NP_337620.1| PE family protein [Mycobacterium tu... 186 7e-46 gi|31794198|ref|NP_856691.1| PE family protein [Mycobacterium bo... 186 1e-45 gi|242556602|pdb|3H6P|A Chain A, Crystal Structure Of Rv3019c-Rv... 186 1e-45 gi|306777319|ref|ZP_07415656.1| esat-6 like protein esxS [Mycoba... 184 3e-45 gi|183983004|ref|YP_001851295.1| EsaT-6 like protein EsxG_1 [Myc... 155 2e-36 gi|240168397|ref|ZP_04747056.1| hypothetical protein MkanA1_0374... 152 2e-35 gi|240169020|ref|ZP_04747679.1| EsaT-6 like protein EsxG_1 [Myco... 151 3e-35 gi|240172729|ref|ZP_04751388.1| hypothetical protein MkanA1_2566... 150 5e-35 gi|212596364|gb|ACJ35572.1| PPE10 [Mycobacterium intracellulare ... 146 1e-33 gi|296165973|ref|ZP_06848431.1| PE family protein [Mycobacterium... 144 5e-33 gi|41409881|ref|NP_962717.1| hypothetical protein MAP3783 [Mycob... 144 6e-33 gi|15607428|ref|NP_214801.1| hypothetical protein Rv0287 [Mycoba... 143 1e-32 gi|254821605|ref|ZP_05226606.1| hypothetical protein MintA_16847... 142 2e-32 gi|342859229|ref|ZP_08715883.1| PE family protein [Mycobacterium... 141 3e-32 gi|240173481|ref|ZP_04752139.1| hypothetical protein MkanA1_2949... 140 6e-32 gi|118465920|ref|YP_883989.1| PE family protein [Mycobacterium a... 139 1e-31 gi|126432977|ref|YP_001068668.1| hypothetical protein Mjls_0364 ... 138 2e-31 gi|15828364|ref|NP_302627.1| PE-family protein [Mycobacterium le... 138 3e-31 gi|289448695|ref|ZP_06438439.1| esat-6 like protein esxS [Mycoba... 137 5e-31 gi|294995045|ref|ZP_06800736.1| esat-6 like protein esxG [Mycoba... 134 3e-30 gi|169629315|ref|YP_001702964.1| PE family protein [Mycobacteriu... 134 3e-30 gi|118616923|ref|YP_905255.1| EsaT-6 like protein EsxG [Mycobact... 134 4e-30 gi|169627768|ref|YP_001701417.1| PE family protein [Mycobacteriu... 133 1e-29 gi|169627153|ref|YP_001700802.1| PE family protein [Mycobacteriu... 130 5e-29 gi|108797356|ref|YP_637553.1| hypothetical protein Mmcs_0376 [My... 129 1e-28 gi|289756352|ref|ZP_06515730.1| PE family protein [Mycobacterium... 127 7e-28 gi|317506270|ref|ZP_07964087.1| hypothetical protein HMPREF9336_... 127 8e-28 gi|317506396|ref|ZP_07964204.1| hypothetical protein HMPREF9336_... 126 1e-27 gi|118469490|ref|YP_885031.1| PE family protein [Mycobacterium s... 125 2e-27 gi|333988927|ref|YP_004521541.1| EsaT-6 like protein EsxG [Mycob... 125 2e-27 gi|120401442|ref|YP_951271.1| hypothetical protein Mvan_0417 [My... 124 3e-27 gi|296393172|ref|YP_003658056.1| hypothetical protein Srot_0745 ... 122 3e-26 gi|320089950|pdb|3Q4H|A Chain A, Crystal Structure Of The Mycoba... 117 5e-25 gi|240169091|ref|ZP_04747750.1| EsaT-6 like protein EsxG_1 [Myco... 108 2e-22 gi|145220928|ref|YP_001131606.1| hypothetical protein Mflv_0324 ... 108 2e-22 gi|108802520|ref|YP_642716.1| hypothetical protein Mmcs_5560 [My... 97.4 7e-19 gi|343927679|ref|ZP_08767147.1| hypothetical protein GOALK_097_0... 38.9 0.28 gi|325110649|ref|YP_004271717.1| hypothetical protein Plabr_4119... 38.5 0.32 gi|282858223|ref|ZP_06267413.1| L-serine dehydratase, iron-sulfu... 36.6 1.3 gi|326383255|ref|ZP_08204943.1| hypothetical protein SCNU_09974 ... 36.2 1.7 gi|262203517|ref|YP_003274725.1| hypothetical protein Gbro_3644 ... 35.4 2.5 >gi|289553189|ref|ZP_06442399.1| esat-6 like protein esxS [Mycobacterium tuberculosis KZN 605] gi|308374702|ref|ZP_07437032.2| hypothetical protein TMFG_04065 [Mycobacterium tuberculosis SUMu006] gi|289437821|gb|EFD20314.1| esat-6 like protein esxS [Mycobacterium tuberculosis KZN 605] gi|308341024|gb|EFP29875.1| hypothetical protein TMFG_04065 [Mycobacterium tuberculosis SUMu006] Length=98 Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA Sbjct 2 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 61 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF Sbjct 62 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 98 >gi|15842583|ref|NP_337620.1| PE family protein [Mycobacterium tuberculosis CDC1551] gi|253797883|ref|YP_003030884.1| esat-6 like protein esxS [Mycobacterium tuberculosis KZN 1435] gi|254233097|ref|ZP_04926424.1| Esat-6 like protein esxS [Mycobacterium tuberculosis C] gi|13882896|gb|AAK47434.1| PE family protein [Mycobacterium tuberculosis CDC1551] gi|124602156|gb|EAY61166.1| Esat-6 like protein esxS [Mycobacterium tuberculosis C] gi|253319386|gb|ACT23989.1| esat-6 like protein esxS [Mycobacterium tuberculosis KZN 1435] gi|339295855|gb|AEJ47966.1| PE family protein [Mycobacterium tuberculosis CCDC5079] gi|339299468|gb|AEJ51578.1| PE family protein [Mycobacterium tuberculosis CCDC5180] Length=102 Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA Sbjct 6 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 65 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF Sbjct 66 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 102 >gi|31794198|ref|NP_856691.1| PE family protein [Mycobacterium bovis AF2122/97] gi|57117047|ref|YP_177919.1| Esat-6 like protein esxS [Mycobacterium tuberculosis H37Rv] gi|121638903|ref|YP_979127.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 46 more sequence titles Length=97 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA Sbjct 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF Sbjct 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 >gi|242556602|pdb|3H6P|A Chain A, Crystal Structure Of Rv3019c-Rv3020c From Mycobacterium Tuberculosis gi|242556603|pdb|3H6P|B Chain B, Crystal Structure Of Rv3019c-Rv3020c From Mycobacterium Tuberculosis Length=111 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA Sbjct 15 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 74 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF Sbjct 75 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 111 >gi|306777319|ref|ZP_07415656.1| esat-6 like protein esxS [Mycobacterium tuberculosis SUMu001] gi|306973435|ref|ZP_07486096.1| esat-6 like protein esxS [Mycobacterium tuberculosis SUMu010] gi|307081145|ref|ZP_07490315.1| esat-6 like protein esxS [Mycobacterium tuberculosis SUMu011] gi|308214322|gb|EFO73721.1| esat-6 like protein esxS [Mycobacterium tuberculosis SUMu001] gi|308357190|gb|EFP46041.1| esat-6 like protein esxS [Mycobacterium tuberculosis SUMu010] gi|308361142|gb|EFP49993.1| esat-6 like protein esxS [Mycobacterium tuberculosis SUMu011] Length=97 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 96/97 (99%), Positives = 97/97 (100%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA Sbjct 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AAAKVNTLLDIAQANLGEAAGTY+AADAAAASSYTGF Sbjct 61 AAAKVNTLLDIAQANLGEAAGTYMAADAAAASSYTGF 97 >gi|183983004|ref|YP_001851295.1| EsaT-6 like protein EsxG_1 [Mycobacterium marinum M] gi|183176330|gb|ACC41440.1| EsaT-6 like protein EsxG_1 [Mycobacterium marinum M] Length=97 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 80/97 (83%), Positives = 85/97 (88%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHI QL+AS +AFA K GLMRHTIGQAEQ A+SAQAFH GESA AFQ AHARFV Sbjct 1 MSLLDAHIGQLVASQSAFAGKVGLMRHTIGQAEQSALSAQAFHIGESATAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AA KVNTLLD+AQANLG+AAGTYVA DAAAASSY GF Sbjct 61 AAGKVNTLLDVAQANLGDAAGTYVATDAAAASSYPGF 97 >gi|240168397|ref|ZP_04747056.1| hypothetical protein MkanA1_03742 [Mycobacterium kansasii ATCC 12478] Length=97 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/97 (88%), Positives = 90/97 (93%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQL+AS +AFAAKAGLMRHTI AEQ AMSAQAFHQGESAAAFQ +HARFV Sbjct 1 MSLLDAHIPQLVASQSAFAAKAGLMRHTISSAEQSAMSAQAFHQGESAAAFQASHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AAAKVN LLDIAQANLG+AAGTYVAADAAAAS+YTGF Sbjct 61 AAAKVNALLDIAQANLGDAAGTYVAADAAAASAYTGF 97 >gi|240169020|ref|ZP_04747679.1| EsaT-6 like protein EsxG_1 [Mycobacterium kansasii ATCC 12478] Length=97 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 82/96 (86%), Positives = 90/96 (94%), Gaps = 0/96 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQL++S +AFAAKAGLMRHTI QAEQ AMSAQAFHQGESA AFQGAHAR++ Sbjct 1 MSLLDAHIPQLVSSQSAFAAKAGLMRHTISQAEQSAMSAQAFHQGESALAFQGAHARYME 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTG 96 AA+KVN LLDIAQANLG+AAGTYVAADAAAAS+YTG Sbjct 61 AASKVNALLDIAQANLGDAAGTYVAADAAAASTYTG 96 >gi|240172729|ref|ZP_04751388.1| hypothetical protein MkanA1_25667 [Mycobacterium kansasii ATCC 12478] Length=97 Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 85/97 (88%), Positives = 90/97 (93%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQL+AS +AF AKA LMRHTIGQAEQ AMSAQAFHQGESAAAFQGAHARFV Sbjct 1 MSLLDAHIPQLVASQSAFGAKAALMRHTIGQAEQAAMSAQAFHQGESAAAFQGAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AAA+VN LLDIAQANLG+AAGTYVAAD+AAASSYT F Sbjct 61 AAARVNALLDIAQANLGDAAGTYVAADSAAASSYTAF 97 >gi|212596364|gb|ACJ35572.1| PPE10 [Mycobacterium intracellulare ATCC 13950] Length=97 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 79/97 (82%), Positives = 88/97 (91%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MS+LDAHIPQL+AS +AF+AKA L+R TI QAEQ+AMSAQAFHQGES+AAFQ AHARFV Sbjct 1 MSMLDAHIPQLVASQSAFSAKAALLRSTISQAEQEAMSAQAFHQGESSAAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AA+VNTLLDIAQANLG+AAGTYVAADAAAAS YT F Sbjct 61 VAARVNTLLDIAQANLGDAAGTYVAADAAAASGYTAF 97 >gi|296165973|ref|ZP_06848431.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898675|gb|EFG78223.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=97 Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 78/97 (81%), Positives = 88/97 (91%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MS+LDAHIPQL+A+ +AF+AKA LMR TI QAEQ+AMSAQAFHQGE++ AFQ AHARFV Sbjct 1 MSMLDAHIPQLVAAQSAFSAKAALMRSTISQAEQEAMSAQAFHQGEASVAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AAA+VNTLLDIAQANLG+AAGTYVAADAAAAS YT F Sbjct 61 AAARVNTLLDIAQANLGDAAGTYVAADAAAASGYTAF 97 >gi|41409881|ref|NP_962717.1| hypothetical protein MAP3783 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398713|gb|AAS06333.1| hypothetical protein MAP_3783 [Mycobacterium avium subsp. paratuberculosis K-10] gi|212596870|gb|ACJ35613.1| PE10 [Mycobacterium avium subsp. avium] gi|336460258|gb|EGO39161.1| hypothetical protein MAPs_42860 [Mycobacterium avium subsp. paratuberculosis S397] Length=97 Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 78/97 (81%), Positives = 88/97 (91%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MS+LDAHIPQL+A+ +AF+AKA LMR TI QAEQ+A+SAQAFHQGES+AAFQ AHARFV Sbjct 1 MSMLDAHIPQLVAAQSAFSAKAALMRSTISQAEQEAVSAQAFHQGESSAAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AA+VNTLLDIAQANLG+AAGTYVAADAAAAS YT F Sbjct 61 VAARVNTLLDIAQANLGDAAGTYVAADAAAASGYTAF 97 >gi|15607428|ref|NP_214801.1| hypothetical protein Rv0287 [Mycobacterium tuberculosis H37Rv] gi|15839673|ref|NP_334710.1| PE family protein [Mycobacterium tuberculosis CDC1551] gi|31791466|ref|NP_853959.1| hypothetical protein Mb0295 [Mycobacterium bovis AF2122/97] 72 more sequence titles Length=97 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 89/97 (92%), Positives = 94/97 (97%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQL+AS +AFAAKAGLMRHTIGQAEQ AMSAQAFHQGES+AAFQ AHARFVA Sbjct 1 MSLLDAHIPQLVASQSAFAAKAGLMRHTIGQAEQAAMSAQAFHQGESSAAFQAAHARFVA 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AAAKVNTLLD+AQANLGEAAGTYVAADAAAAS+YTGF Sbjct 61 AAAKVNTLLDVAQANLGEAAGTYVAADAAAASTYTGF 97 >gi|254821605|ref|ZP_05226606.1| hypothetical protein MintA_16847 [Mycobacterium intracellulare ATCC 13950] Length=95 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 77/95 (82%), Positives = 86/95 (91%), Gaps = 0/95 (0%) Query 3 LLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAA 62 +LDAHIPQL+AS +AF+AKA L+R TI QAEQ+AMSAQAFHQGES+AAFQ AHARFV A Sbjct 1 MLDAHIPQLVASQSAFSAKAALLRSTISQAEQEAMSAQAFHQGESSAAFQAAHARFVEVA 60 Query 63 AKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 A+VNTLLDIAQANLG+AAGTYVAADAAAAS YT F Sbjct 61 ARVNTLLDIAQANLGDAAGTYVAADAAAASGYTAF 95 >gi|342859229|ref|ZP_08715883.1| PE family protein [Mycobacterium colombiense CECT 3035] gi|342133470|gb|EGT86673.1| PE family protein [Mycobacterium colombiense CECT 3035] Length=95 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 77/95 (82%), Positives = 86/95 (91%), Gaps = 0/95 (0%) Query 3 LLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAA 62 +LDAHIPQL+A+ +AF+AKA LMR TI QAEQ+AMSAQAFHQGES+AAFQ AHARFV A Sbjct 1 MLDAHIPQLVAAQSAFSAKAALMRSTISQAEQEAMSAQAFHQGESSAAFQAAHARFVEVA 60 Query 63 AKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 A+VNTLLDIAQANLG+AAGTYVAADAAAAS YT F Sbjct 61 ARVNTLLDIAQANLGDAAGTYVAADAAAASGYTAF 95 >gi|240173481|ref|ZP_04752139.1| hypothetical protein MkanA1_29491 [Mycobacterium kansasii ATCC 12478] Length=97 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 86/97 (89%), Positives = 90/97 (93%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQL+AS +AFAAKAGLMRHTIG AEQ AMSAQAFHQGESAAAFQ AHARFV Sbjct 1 MSLLDAHIPQLVASQSAFAAKAGLMRHTIGSAEQSAMSAQAFHQGESAAAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AA +VN LLDIAQANLG+AAGTYVAADAAAASSYTGF Sbjct 61 AAGRVNALLDIAQANLGDAAGTYVAADAAAASSYTGF 97 >gi|118465920|ref|YP_883989.1| PE family protein [Mycobacterium avium 104] gi|254777306|ref|ZP_05218822.1| PE family protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118167207|gb|ABK68104.1| pe family protein [Mycobacterium avium 104] Length=95 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/95 (80%), Positives = 86/95 (91%), Gaps = 0/95 (0%) Query 3 LLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAA 62 +LDAHIPQL+A+ +AF+AKA LMR TI QAEQ+A+SAQAFHQGES+AAFQ AHARFV A Sbjct 1 MLDAHIPQLVAAQSAFSAKAALMRSTISQAEQEAVSAQAFHQGESSAAFQAAHARFVEVA 60 Query 63 AKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 A+VNTLLDIAQANLG+AAGTYVAADAAAAS YT F Sbjct 61 ARVNTLLDIAQANLGDAAGTYVAADAAAASGYTAF 95 >gi|126432977|ref|YP_001068668.1| hypothetical protein Mjls_0364 [Mycobacterium sp. JLS] gi|126232777|gb|ABN96177.1| hypothetical protein Mjls_0364 [Mycobacterium sp. JLS] Length=97 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/95 (74%), Positives = 79/95 (84%), Gaps = 0/95 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MS+LDAHIPQLIAS AF AKA LMR T+ QAEQ A S+QAFH GES+AAFQ AHARF+ Sbjct 1 MSMLDAHIPQLIASEAAFGAKAALMRSTMAQAEQAAQSSQAFHMGESSAAFQAAHARFIE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYT 95 +AK+N LLDIAQ NLG+AAGTYVA DAAAA +YT Sbjct 61 VSAKINALLDIAQVNLGDAAGTYVAEDAAAAGTYT 95 >gi|15828364|ref|NP_302627.1| PE-family protein [Mycobacterium leprae TN] gi|221230841|ref|YP_002504257.1| PE-family protein [Mycobacterium leprae Br4923] gi|13093794|emb|CAC32063.1| PE-family protein [Mycobacterium leprae] gi|219933948|emb|CAR72631.1| PE-family protein [Mycobacterium leprae Br4923] Length=98 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 71/95 (75%), Positives = 80/95 (85%), Gaps = 0/95 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLD HIPQL+AS +AFAAKA LMR I QAE +A+SAQAFHQGES+AAFQ AHA+FV Sbjct 1 MSLLDVHIPQLVASESAFAAKAALMRSQINQAECEAISAQAFHQGESSAAFQSAHAQFVT 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYT 95 AA K+N LLDIAQ +LGEAA TYVA DA AAS+YT Sbjct 61 AAEKINALLDIAQQHLGEAAETYVATDATAASTYT 95 >gi|289448695|ref|ZP_06438439.1| esat-6 like protein esxS [Mycobacterium tuberculosis CPHL_A] gi|289421653|gb|EFD18854.1| esat-6 like protein esxS [Mycobacterium tuberculosis CPHL_A] Length=73 Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 72/73 (99%), Positives = 72/73 (99%), Gaps = 0/73 (0%) Query 25 MRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTYV 84 MRHTI QAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTYV Sbjct 1 MRHTIAQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTYV 60 Query 85 AADAAAASSYTGF 97 AADAAAASSYTGF Sbjct 61 AADAAAASSYTGF 73 >gi|294995045|ref|ZP_06800736.1| esat-6 like protein esxG [Mycobacterium tuberculosis 210] Length=94 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 84/94 (90%), Positives = 90/94 (96%), Gaps = 0/94 (0%) Query 4 LDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAA 63 +DAHIPQL+AS +AFAAKAGLMRHTIGQAEQ MSAQAFHQGES+AAFQ AHARFVAAAA Sbjct 1 MDAHIPQLVASQSAFAAKAGLMRHTIGQAEQAPMSAQAFHQGESSAAFQAAHARFVAAAA 60 Query 64 KVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 KVNTLLD+AQANLGEAAGTYVAADAAAAS+YTGF Sbjct 61 KVNTLLDVAQANLGEAAGTYVAADAAAASTYTGF 94 >gi|169629315|ref|YP_001702964.1| PE family protein [Mycobacterium abscessus ATCC 19977] gi|169241282|emb|CAM62310.1| Hypothetical PE family protein [Mycobacterium abscessus] Length=97 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 70/96 (73%), Positives = 75/96 (79%), Gaps = 0/96 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIP L+A+ FAAK LMR TI QAE A+SAQAFH GES+ AFQ AHARFV Sbjct 1 MSLLDAHIPALVAAEGTFAAKTALMRSTISQAESAALSAQAFHVGESSVAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTG 96 AAKVN LLDIAQ NLG+AA TYVA DAAAAS Y G Sbjct 61 VAAKVNALLDIAQVNLGDAAATYVAEDAAAASRYVG 96 >gi|118616923|ref|YP_905255.1| EsaT-6 like protein EsxG [Mycobacterium ulcerans Agy99] gi|183980574|ref|YP_001848865.1| EsaT-6 like protein EsxG [Mycobacterium marinum M] gi|118569033|gb|ABL03784.1| EsaT-6 like protein EsxG [Mycobacterium ulcerans Agy99] gi|183173900|gb|ACC39010.1| EsaT-6 like protein EsxG [Mycobacterium marinum M] Length=97 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 87/97 (90%), Positives = 91/97 (94%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQL+AS AF AKAGLMRHTI QAEQ A+SAQAFHQGESAA+FQ AHARFVA Sbjct 1 MSLLDAHIPQLVASQAAFGAKAGLMRHTISQAEQAALSAQAFHQGESAASFQAAHARFVA 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 AAAKVNTLLDIAQANLGEAAGTYVAADAAAAS+YTGF Sbjct 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASAYTGF 97 >gi|169627768|ref|YP_001701417.1| PE family protein [Mycobacterium abscessus ATCC 19977] gi|169239735|emb|CAM60763.1| PE family protein [Mycobacterium abscessus] Length=97 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/96 (72%), Positives = 74/96 (78%), Gaps = 0/96 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIP L+A+ F AK LMR TI QAE A+SAQAFH GES+ AFQ AHARFV Sbjct 1 MSLLDAHIPALVAAEGTFGAKTALMRSTISQAESAALSAQAFHVGESSVAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTG 96 AAKVN LLDIAQ NLG+AA TYVA DAAAAS Y G Sbjct 61 VAAKVNALLDIAQVNLGDAAATYVAEDAAAASRYVG 96 >gi|169627153|ref|YP_001700802.1| PE family protein [Mycobacterium abscessus ATCC 19977] gi|169239120|emb|CAM60148.1| Probable PE family protein [Mycobacterium abscessus] Length=97 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 68/96 (71%), Positives = 73/96 (77%), Gaps = 0/96 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIP L+A+ F AK LMR TI AE A+SAQAFH GES+ AFQ AHARFV Sbjct 1 MSLLDAHIPALVAAEGTFGAKTALMRSTISPAESAALSAQAFHVGESSVAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTG 96 AAKVN LLDIAQ NLG+AA TYVA DAAAAS Y G Sbjct 61 VAAKVNALLDIAQVNLGDAAATYVAEDAAAASRYVG 96 >gi|108797356|ref|YP_637553.1| hypothetical protein Mmcs_0376 [Mycobacterium sp. MCS] gi|119866440|ref|YP_936392.1| hypothetical protein Mkms_0385 [Mycobacterium sp. KMS] gi|108767775|gb|ABG06497.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692529|gb|ABL89602.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=97 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/87 (74%), Positives = 72/87 (83%), Gaps = 0/87 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MS+LDAHIPQLIAS AF AKA LMR T+ QAEQ A S+QAFH GES+AAFQ AHARF+ Sbjct 1 MSMLDAHIPQLIASEAAFGAKAALMRSTMAQAEQAAQSSQAFHMGESSAAFQAAHARFIE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAAD 87 +AK+N LLDIAQ NLG+AAGTYVA D Sbjct 61 VSAKINALLDIAQVNLGDAAGTYVAED 87 >gi|289756352|ref|ZP_06515730.1| PE family protein [Mycobacterium tuberculosis T85] gi|289711916|gb|EFD75928.1| PE family protein [Mycobacterium tuberculosis T85] Length=93 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 81/89 (92%), Positives = 86/89 (97%), Gaps = 0/89 (0%) Query 9 PQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTL 68 PQL+AS +AFAAKAGLMRHTIGQAEQ AMSAQAFHQGES+AAFQ AHARFVAAAAKVNTL Sbjct 5 PQLVASQSAFAAKAGLMRHTIGQAEQAAMSAQAFHQGESSAAFQAAHARFVAAAAKVNTL 64 Query 69 LDIAQANLGEAAGTYVAADAAAASSYTGF 97 LD+AQANLGEAAGTYVAADAAAAS+YTGF Sbjct 65 LDVAQANLGEAAGTYVAADAAAASTYTGF 93 >gi|317506270|ref|ZP_07964087.1| hypothetical protein HMPREF9336_00456 [Segniliparus rugosus ATCC BAA-974] gi|316255436|gb|EFV14689.1| hypothetical protein HMPREF9336_00456 [Segniliparus rugosus ATCC BAA-974] Length=97 Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 64/94 (69%), Positives = 74/94 (79%), Gaps = 0/94 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQL+AS AF AK LMR T+ QAE A+ AQAFH GES+ AFQ AHARFV Sbjct 1 MSLLDAHIPQLVASEAAFGAKTALMRSTMAQAESAALGAQAFHVGESSLAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSY 94 AAAKVN LLD+AQANL +A+G+YVA D A +S + Sbjct 61 AAAKVNVLLDVAQANLADASGSYVAEDVAGSSGF 94 >gi|317506396|ref|ZP_07964204.1| hypothetical protein HMPREF9336_00574 [Segniliparus rugosus ATCC BAA-974] gi|317509556|ref|ZP_07967144.1| hypothetical protein HMPREF9336_03518 [Segniliparus rugosus ATCC BAA-974] gi|316252147|gb|EFV11629.1| hypothetical protein HMPREF9336_03518 [Segniliparus rugosus ATCC BAA-974] gi|316255312|gb|EFV14574.1| hypothetical protein HMPREF9336_00574 [Segniliparus rugosus ATCC BAA-974] Length=99 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/94 (69%), Positives = 75/94 (80%), Gaps = 0/94 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 +SLLDAHIPQL+AS AF AKA LMR T+ QAE A+ AQAFH GES+ AFQ AHARFV Sbjct 3 VSLLDAHIPQLVASEAAFGAKAALMRSTMAQAESAALGAQAFHVGESSLAFQAAHARFVE 62 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSY 94 AAAKVN LLD+AQANL +A+G+YVA D A +S + Sbjct 63 AAAKVNVLLDVAQANLADASGSYVAEDVAGSSGF 96 >gi|118469490|ref|YP_885031.1| PE family protein [Mycobacterium smegmatis str. MC2 155] gi|118170777|gb|ABK71673.1| pe family protein [Mycobacterium smegmatis str. MC2 155] Length=97 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/97 (75%), Positives = 80/97 (83%), Gaps = 0/97 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQLIAS F AKA LMR TI QAEQ AMS+QAFH GE++AAFQ AHARFV Sbjct 1 MSLLDAHIPQLIASEANFGAKAALMRSTIAQAEQAAMSSQAFHMGEASAAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 +AKVN LLDIAQ N+G+AA +YVA DAAAAS+YTG Sbjct 61 VSAKVNALLDIAQLNIGDAASSYVAQDAAAASTYTGI 97 >gi|333988927|ref|YP_004521541.1| EsaT-6 like protein EsxG [Mycobacterium sp. JDM601] gi|333988935|ref|YP_004521549.1| EsaT-6 like protein EsxG [Mycobacterium sp. JDM601] gi|333484895|gb|AEF34287.1| EsaT-6 like protein EsxG [Mycobacterium sp. JDM601] gi|333484903|gb|AEF34295.1| EsaT-6 like protein EsxG [Mycobacterium sp. JDM601] Length=95 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/94 (75%), Positives = 80/94 (86%), Gaps = 0/94 (0%) Query 3 LLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAA 62 +LDAHIPQL+AS +AF AKA LMR T+ QAEQ A+SAQAFH GE+AAAFQG+HARFVA A Sbjct 1 MLDAHIPQLVASESAFGAKAALMRSTMAQAEQAALSAQAFHVGEAAAAFQGSHARFVAMA 60 Query 63 AKVNTLLDIAQANLGEAAGTYVAADAAAASSYTG 96 A+VN LLD+AQ NL +A TYVAADAAAAS YTG Sbjct 61 ARVNALLDMAQVNLADAGSTYVAADAAAASGYTG 94 >gi|120401442|ref|YP_951271.1| hypothetical protein Mvan_0417 [Mycobacterium vanbaalenii PYR-1] gi|119954260|gb|ABM11265.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=97 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 71/95 (75%), Positives = 82/95 (87%), Gaps = 0/95 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MS+LDAHIPQL+AS AF AKAGLMR TI QAEQ A SAQAFH GES+AAFQ AHARFV Sbjct 1 MSMLDAHIPQLVASEAAFGAKAGLMRSTIAQAEQAAQSAQAFHMGESSAAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYT 95 A+AK+N LLD+AQAN+G+AA +YVA DA+AAS+YT Sbjct 61 ASAKINALLDVAQANIGDAAASYVAEDASAASNYT 95 >gi|296393172|ref|YP_003658056.1| hypothetical protein Srot_0745 [Segniliparus rotundus DSM 44985] gi|296180319|gb|ADG97225.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=97 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/95 (73%), Positives = 80/95 (85%), Gaps = 0/95 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQL+AS AF AKAGLMR T+ QAE A+ AQAFH+GE+A AFQ AHARFV Sbjct 1 MSLLDAHIPQLVASEGAFGAKAGLMRSTMAQAESAALGAQAFHRGEAAVAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYT 95 AA+VN LLD+AQANL +A+G+YVA DAAAASSY+ Sbjct 61 VAARVNVLLDMAQANLADASGSYVAQDAAAASSYS 95 >gi|320089950|pdb|3Q4H|A Chain A, Crystal Structure Of The Mycobacterium Smegmatis Esxgh Complex (Msmeg_0620-Msmeg_0621) gi|320089952|pdb|3Q4H|C Chain C, Crystal Structure Of The Mycobacterium Smegmatis Esxgh Complex (Msmeg_0620-Msmeg_0621) Length=98 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 69/96 (72%), Positives = 77/96 (81%), Gaps = 0/96 (0%) Query 2 SLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAA 61 SLLDAHIPQLIAS F AKA L R TI QAEQ A S+QAFH GE++AAFQ AHARFV Sbjct 3 SLLDAHIPQLIASEANFGAKAALXRSTIAQAEQAAXSSQAFHXGEASAAFQAAHARFVEV 62 Query 62 AAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF 97 +AKVN LLDIAQ N+G+AA +YVA DAAAAS+YTG Sbjct 63 SAKVNALLDIAQLNIGDAASSYVAQDAAAASTYTGI 98 >gi|240169091|ref|ZP_04747750.1| EsaT-6 like protein EsxG_1 [Mycobacterium kansasii ATCC 12478] Length=73 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/73 (80%), Positives = 63/73 (87%), Gaps = 0/73 (0%) Query 25 MRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTYV 84 MRH I QAEQ A +AQAFH G+SAAAFQ AHARFVAA A+VN LLDIAQANLG+AAGT V Sbjct 1 MRHRIDQAEQSATAAQAFHVGQSAAAFQSAHARFVAAVAQVNALLDIAQANLGDAAGTCV 60 Query 85 AADAAAASSYTGF 97 AAD AAAS+YTGF Sbjct 61 AADGAAASTYTGF 73 >gi|145220928|ref|YP_001131606.1| hypothetical protein Mflv_0324 [Mycobacterium gilvum PYR-GCK] gi|315442102|ref|YP_004074981.1| hypothetical protein Mspyr1_04340 [Mycobacterium sp. Spyr1] gi|145213414|gb|ABP42818.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315260405|gb|ADT97146.1| hypothetical protein Mspyr1_04340 [Mycobacterium sp. Spyr1] Length=97 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/94 (78%), Positives = 79/94 (85%), Gaps = 0/94 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDAHIPQ+IAS AF AKAGLMR TI QAEQ A SAQAFH GESA AFQ AHARFV Sbjct 1 MSLLDAHIPQMIASEAAFGAKAGLMRSTIAQAEQAAQSAQAFHMGESAGAFQAAHARFVE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSY 94 +AK+N LLDIAQAN+G+AAG YVA DAAAAS+Y Sbjct 61 TSAKINALLDIAQANVGDAAGAYVAEDAAAASTY 94 >gi|108802520|ref|YP_642716.1| hypothetical protein Mmcs_5560 [Mycobacterium sp. MCS] gi|119855349|ref|YP_935952.1| hypothetical protein Mkms_5963 [Mycobacterium sp. KMS] gi|108772939|gb|ABG11660.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119698066|gb|ABL95137.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=106 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 52/95 (55%), Positives = 62/95 (66%), Gaps = 0/95 (0%) Query 1 MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVA 60 MSLLDA P + ++ F ++ +MR + AE A AQAFHQGESA AFQ AHARF+ Sbjct 1 MSLLDAQTPAIFSASANFTDQSAMMRSALHSAESTAQQAQAFHQGESAVAFQSAHARFIE 60 Query 61 AAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYT 95 A+AK+N LLDIA AN EA TY AADA A Y Sbjct 61 ASAKINQLLDIAAANQNEAGTTYNAADAEGAEGYN 95 >gi|343927679|ref|ZP_08767147.1| hypothetical protein GOALK_097_01010 [Gordonia alkanivorans NBRC 16433] gi|343762320|dbj|GAA14073.1| hypothetical protein GOALK_097_01010 [Gordonia alkanivorans NBRC 16433] Length=104 Score = 38.9 bits (89), Expect = 0.28, Method: Compositional matrix adjust. Identities = 23/70 (33%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 25 MRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTYV 84 M+ TIG ++ A + QG++ AAF G H + A +N LLD +A + Y Sbjct 33 MKETIGVIQKHAANTTPTWQGKAGAAFDGTHTDWNKEANTLNQLLDQIKAQMTNGFAGYE 92 Query 85 AADAAAASSY 94 D+AAA + Sbjct 93 DQDSAAAGHF 102 >gi|325110649|ref|YP_004271717.1| hypothetical protein Plabr_4119 [Planctomyces brasiliensis DSM 5305] gi|324970917|gb|ADY61695.1| hypothetical protein Plabr_4119 [Planctomyces brasiliensis DSM 5305] Length=324 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 17/54 (32%), Positives = 25/54 (47%), Gaps = 0/54 (0%) Query 30 GQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTY 83 G + Q M ++H+G + H RF++ V L D+A N GE G Y Sbjct 271 GNSTQALMGPHSYHRGGAQILLCDGHVRFISENIDVELLRDLATRNGGEVVGEY 324 >gi|282858223|ref|ZP_06267413.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Pyramidobacter piscolens W5455] gi|282583954|gb|EFB89332.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Pyramidobacter piscolens W5455] Length=227 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/56 (40%), Positives = 31/56 (56%), Gaps = 3/56 (5%) Query 1 MSLLDAHIPQLI---ASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQG 53 MSLLD P +I +SHTA A + G+M + E+ SA+ F +G AA + G Sbjct 1 MSLLDIIGPVMIGPSSSHTAGAVRIGMMARRLWGWERPLRSAKLFLRGSFAATYWG 56 >gi|326383255|ref|ZP_08204943.1| hypothetical protein SCNU_09974 [Gordonia neofelifaecis NRRL B-59395] gi|326198005|gb|EGD55191.1| hypothetical protein SCNU_09974 [Gordonia neofelifaecis NRRL B-59395] Length=103 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/72 (30%), Positives = 37/72 (52%), Gaps = 0/72 (0%) Query 25 MRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTYV 84 M+ IGQ ++ A+S ++ G++++AF+ H + + A K+ LD ++ L Y Sbjct 25 MQRIIGQIQKSAVSGKSGWDGKASSAFETTHTDWHSIATKLQGALDDIESKLTTGFRGYD 84 Query 85 AADAAAASSYTG 96 DA A TG Sbjct 85 DEDATVAGQLTG 96 >gi|262203517|ref|YP_003274725.1| hypothetical protein Gbro_3644 [Gordonia bronchialis DSM 43247] gi|262086864|gb|ACY22832.1| hypothetical protein Gbro_3644 [Gordonia bronchialis DSM 43247] Length=112 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/72 (31%), Positives = 33/72 (46%), Gaps = 0/72 (0%) Query 25 MRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTYV 84 M+ TIG + A +A G + AF G H + AA +N LLD + L Y Sbjct 36 MKDTIGVIARHASNATPTWLGRAGVAFDGTHTDWNKAALTMNNLLDQIRTQLSAGFTGYE 95 Query 85 AADAAAASSYTG 96 D++A+ + G Sbjct 96 DQDSSASQGFGG 107 Lambda K H 0.318 0.122 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130655526400 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40