BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3022A

Length=104
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15842585|ref|NP_337622.1|  PE family protein [Mycobacterium tu...   186    9e-46
gi|254365653|ref|ZP_04981698.1|  PE family protein [Mycobacterium...   185    2e-45
gi|306777325|ref|ZP_07415662.1|  putative PE family protein [Myco...   185    2e-45
gi|31794200|ref|NP_856693.1|  PE family protein [Mycobacterium bo...   184    5e-45
gi|167966626|ref|ZP_02548903.1|  PE family protein [Mycobacterium...   182    1e-44
gi|306804804|ref|ZP_07441472.1|  putative PE family protein [Myco...   182    1e-44
gi|308380551|ref|ZP_07490320.2|  putative PE family protein [Myco...   175    2e-42
gi|323718348|gb|EGB27525.1|  PE family protein [Mycobacterium tub...   167    4e-40
gi|308369801|ref|ZP_07419129.2|  PE family protein [Mycobacterium...   165    2e-39
gi|308372403|ref|ZP_07428546.2|  putative PE family protein [Myco...   162    1e-38
gi|340628015|ref|YP_004746467.1|  PE family protein [Mycobacteriu...   125    2e-27
gi|15828365|ref|NP_302628.1|  PE-family protein [Mycobacterium le...   115    2e-24
gi|145220930|ref|YP_001131608.1|  PE domain-containing protein [M...   112    2e-23
gi|118470806|ref|YP_885029.1|  PE family protein [Mycobacterium s...   110    6e-23
gi|240171484|ref|ZP_04750143.1|  PE domain-containing protein [My...   110    6e-23
gi|240169093|ref|ZP_04747752.1|  hypothetical protein MkanA1_0725...   110    8e-23
gi|118617769|ref|YP_906101.1|  PE family protein [Mycobacterium u...   109    2e-22
gi|118616921|ref|YP_905253.1|  PE family protein [Mycobacterium u...   108    2e-22
gi|108797353|ref|YP_637550.1|  PE-like protein [Mycobacterium sp....   108    3e-22
gi|15839671|ref|NP_334708.1|  PE family protein [Mycobacterium tu...   106    1e-21
gi|118467190|ref|YP_883991.1|  PE family protein [Mycobacterium a...   105    2e-21
gi|41409879|ref|NP_962715.1|  hypothetical protein MAP3781 [Mycob...   104    3e-21
gi|296167588|ref|ZP_06849913.1|  PE-family protein [Mycobacterium...   104    4e-21
gi|240168499|ref|ZP_04747158.1|  PE family protein, PE5 [Mycobact...   104    4e-21
gi|120401439|ref|YP_951268.1|  PE domain-containing protein [Myco...   103    6e-21
gi|254818902|ref|ZP_05223903.1|  PE family protein [Mycobacterium...   102    2e-20
gi|240173309|ref|ZP_04751967.1|  PE family protein [Mycobacterium...   100    9e-20
gi|118619480|ref|YP_907812.1|  PE family protein [Mycobacterium u...  98.6    3e-19
gi|15827194|ref|NP_301457.1|  PE-family protein [Mycobacterium le...  98.6    3e-19
gi|333988933|ref|YP_004521547.1|  PE family protein PE5 [Mycobact...  98.6    3e-19
gi|254777309|ref|ZP_05218825.1|  hypothetical protein MaviaA2_219...  97.4    6e-19
gi|240170992|ref|ZP_04749651.1|  hypothetical protein MkanA1_1690...  97.1    8e-19
gi|169627151|ref|YP_001700800.1|  PE family protein [Mycobacteriu...  95.1    3e-18
gi|342859231|ref|ZP_08715885.1|  hypothetical protein MCOL_10143 ...  94.0    6e-18
gi|317506395|ref|ZP_07964203.1|  PE family protein [Segniliparus ...  93.2    1e-17
gi|240173110|ref|ZP_04751768.1|  PE-family protein [Mycobacterium...  89.4    2e-16
gi|41406220|ref|NP_959056.1|  hypothetical protein MAP0122 [Mycob...  88.2    3e-16
gi|336460186|gb|EGO39090.1|  PE family protein [Mycobacterium avi...  87.0    7e-16
gi|254773162|ref|ZP_05214678.1|  PE family protein [Mycobacterium...  87.0    8e-16
gi|342860175|ref|ZP_08716827.1|  PE family protein [Mycobacterium...  85.5    2e-15
gi|169627767|ref|YP_001701416.1|  PE family protein [Mycobacteriu...  85.5    3e-15
gi|340626400|ref|YP_004744852.1|  PE family protein [Mycobacteriu...  84.0    7e-15
gi|15840844|ref|NP_335881.1|  PE family protein [Mycobacterium tu...  84.0    7e-15
gi|254364274|ref|ZP_04980320.1|  PE family protein [Mycobacterium...  82.8    1e-14
gi|240168395|ref|ZP_04747054.1|  PE family protein [Mycobacterium...  82.8    2e-14
gi|240173532|ref|ZP_04752190.1|  PE family protein [Mycobacterium...  80.9    6e-14
gi|212596236|gb|ACJ35562.1|  PE1 [Mycobacterium intracellulare AT...  80.9    6e-14
gi|183985227|ref|YP_001853518.1|  PE family protein, PE5_1 [Mycob...  80.5    8e-14
gi|254821558|ref|ZP_05226559.1|  PE family protein [Mycobacterium...  80.5    9e-14
gi|183983962|ref|YP_001852253.1|  PE-PGRS family protein [Mycobac...  79.0    2e-13


>gi|15842585|ref|NP_337622.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|148824213|ref|YP_001288967.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|289553187|ref|ZP_06442397.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|13882898|gb|AAK47436.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|148722740|gb|ABR07365.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|289437819|gb|EFD20312.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|328457658|gb|AEB03081.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|344220857|gb|AEN01488.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=137

 Score =  186 bits (472),  Expect = 9e-46, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE
Sbjct  34   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  93

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  104
            HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL
Sbjct  94   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  137


>gi|254365653|ref|ZP_04981698.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|297635651|ref|ZP_06953431.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297732649|ref|ZP_06961767.1| PE family protein [Mycobacterium tuberculosis KZN R506]
 gi|134151166|gb|EBA43211.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=107

 Score =  185 bits (470),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE
Sbjct  4    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  63

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  104
            HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL
Sbjct  64   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  107


>gi|306777325|ref|ZP_07415662.1| putative PE family protein [Mycobacterium tuberculosis SUMu001]
 gi|306973440|ref|ZP_07486101.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|307085746|ref|ZP_07494859.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|308214314|gb|EFO73713.1| putative PE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308357183|gb|EFP46034.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308364738|gb|EFP53589.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|323718352|gb|EGB27528.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
 gi|339299470|gb|AEJ51580.1| PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=105

 Score =  185 bits (469),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE
Sbjct  2    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  61

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  104
            HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL
Sbjct  62   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  105


>gi|31794200|ref|NP_856693.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57117050|ref|YP_177685.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 gi|121638905|ref|YP_979129.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 19 more sequence titles
 gi|148662874|ref|YP_001284397.1| PE family protein [Mycobacterium tuberculosis H37Ra]
 gi|224991397|ref|YP_002646086.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253797881|ref|YP_003030882.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289448698|ref|ZP_06438442.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289575731|ref|ZP_06455958.1| PE family protein [Mycobacterium tuberculosis K85]
 gi|289746830|ref|ZP_06506208.1| PE family protein [Mycobacterium tuberculosis 02_1987]
 gi|339633030|ref|YP_004724672.1| PE family protein [Mycobacterium africanum GM041182]
 gi|31619795|emb|CAD96735.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|41352779|emb|CAE55543.1| PE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|121494553|emb|CAL73034.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148507026|gb|ABQ74835.1| PE family protein [Mycobacterium tuberculosis H37Ra]
 gi|224774512|dbj|BAH27318.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319384|gb|ACT23987.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289421656|gb|EFD18857.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289540162|gb|EFD44740.1| PE family protein [Mycobacterium tuberculosis K85]
 gi|289687358|gb|EFD54846.1| PE family protein [Mycobacterium tuberculosis 02_1987]
 gi|339332386|emb|CCC28099.1| PE family protein [Mycobacterium africanum GM041182]
 gi|341602944|emb|CCC65622.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
 gi|344220858|gb|AEN01489.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=104

 Score =  184 bits (466),  Expect = 5e-45, Method: Compositional matrix adjust.
 Identities = 103/104 (99%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE
Sbjct  1    MTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  104
            HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL
Sbjct  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  104


>gi|167966626|ref|ZP_02548903.1| PE family protein [Mycobacterium tuberculosis H37Ra]
Length=107

 Score =  182 bits (463),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 103/104 (99%), Positives = 103/104 (99%), Gaps = 0/104 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            VTL VVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE
Sbjct  4    VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  63

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  104
            HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL
Sbjct  64   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  107


>gi|306804804|ref|ZP_07441472.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
 gi|306808997|ref|ZP_07445665.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308372321|ref|ZP_07667351.1| PE family protein [Mycobacterium tuberculosis SUMu004]
 6 more sequence titles
 gi|308378167|ref|ZP_07668680.1| putative PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308333637|gb|EFP22488.1| PE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308344710|gb|EFP33561.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308348659|gb|EFP37510.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
 gi|308353386|gb|EFP42237.1| putative PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|339295857|gb|AEJ47968.1| PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=105

 Score =  182 bits (462),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 103/104 (99%), Positives = 103/104 (99%), Gaps = 0/104 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            VTL VVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE
Sbjct  2    VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  61

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  104
            HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL
Sbjct  62   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  105


>gi|308380551|ref|ZP_07490320.2| putative PE family protein [Mycobacterium tuberculosis SUMu011]
 gi|313659981|ref|ZP_07816861.1| PE family protein [Mycobacterium tuberculosis KZN V2475]
 gi|308361135|gb|EFP49986.1| putative PE family protein [Mycobacterium tuberculosis SUMu011]
Length=100

 Score =  175 bits (444),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  5    VVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSEHAAI  64
            +VPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSEHAAI
Sbjct  1    MVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSEHAAI  60

Query  65   AGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  104
            AGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL
Sbjct  61   AGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  100


>gi|323718348|gb|EGB27525.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=127

 Score =  167 bits (424),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE
Sbjct  34   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  93

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAA  94
            HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAA
Sbjct  94   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAA  127


>gi|308369801|ref|ZP_07419129.2| PE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308371210|ref|ZP_07424193.2| PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308373640|ref|ZP_07433147.2| putative PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308374703|ref|ZP_07437033.2| putative PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308326369|gb|EFP15220.1| PE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308329490|gb|EFP18341.1| PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308336869|gb|EFP25720.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308341019|gb|EFP29870.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
Length=104

 Score =  165 bits (417),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 94/95 (99%), Positives = 94/95 (99%), Gaps = 0/95 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            VTL VVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE
Sbjct  10   VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  69

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAA  95
            HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAA
Sbjct  70   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAA  104


>gi|308372403|ref|ZP_07428546.2| putative PE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308333337|gb|EFP22188.1| putative PE family protein [Mycobacterium tuberculosis SUMu004]
Length=102

 Score =  162 bits (411),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 92/93 (99%), Positives = 92/93 (99%), Gaps = 0/93 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            VTL VVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE
Sbjct  10   VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  69

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVA  93
            HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVA
Sbjct  70   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVA  102


>gi|340628015|ref|YP_004746467.1| PE family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006205|emb|CCC45379.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=104

 Score =  125 bits (314),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 101/104 (98%), Positives = 103/104 (99%), Gaps = 0/104 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE
Sbjct  1    MTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  104
            HAAIA EGVEELGRSGVAVGESG+GYAAGDAVAAATYLVSGGSL
Sbjct  61   HAAIAAEGVEELGRSGVAVGESGVGYAAGDAVAAATYLVSGGSL  104


>gi|15828365|ref|NP_302628.1| PE-family protein [Mycobacterium leprae TN]
 gi|221230842|ref|YP_002504258.1| PE-family protein [Mycobacterium leprae Br4923]
 gi|13093795|emb|CAC32065.1| PE-family protein [Mycobacterium leprae]
 gi|219933949|emb|CAR72633.1| PE-family protein [Mycobacterium leprae Br4923]
Length=102

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 65/97 (68%), Positives = 77/97 (80%), Gaps = 0/97 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           +TLRVVPE LAA S A++ALTARL AAHA A P + AVV PAADPVSLQ+A GFSA G E
Sbjct  1   MTLRVVPEKLAATSEAMKALTARLEAAHAAAFPCLVAVVPPAADPVSLQTAAGFSARGQE  60

Query  61  HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATY  97
           HA +A +GVEELGR+G+ VG+S   YA  DA+AA+TY
Sbjct  61  HALVAAQGVEELGRAGIGVGQSSTHYAISDALAASTY  97


>gi|145220930|ref|YP_001131608.1| PE domain-containing protein [Mycobacterium gilvum PYR-GCK]
 gi|315442100|ref|YP_004074979.1| PE family protein [Mycobacterium sp. Spyr1]
 gi|145213416|gb|ABP42820.1| PE domain protein [Mycobacterium gilvum PYR-GCK]
 gi|315260403|gb|ADT97144.1| PE family protein [Mycobacterium sp. Spyr1]
Length=102

 Score =  112 bits (280),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 71/102 (70%), Positives = 83/102 (82%), Gaps = 0/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGL AASAAVEALTAR+AAAHA AAP +TAV+ PAAD VSLQ+A G SA G E
Sbjct  1    MTLRVVPEGLTAASAAVEALTARMAAAHAAAAPLVTAVLPPAADAVSLQTATGLSANGVE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            H +IA  GVEELGRSGV VG+S   Y +GDA+AA +YL++ G
Sbjct  61   HQSIAARGVEELGRSGVGVGDSAASYVSGDAMAATSYLIARG  102


>gi|118470806|ref|YP_885029.1| PE family protein [Mycobacterium smegmatis str. MC2 155]
 gi|118172093|gb|ABK72989.1| pe family protein [Mycobacterium smegmatis str. MC2 155]
Length=103

 Score =  110 bits (276),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 73/102 (72%), Positives = 86/102 (85%), Gaps = 0/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGL AAS+AVEALTARLAAAHA AAP I+ V+ PAAD VSLQ+A GFSA G++
Sbjct  1    MTLRVVPEGLTAASSAVEALTARLAAAHAAAAPMISTVLPPAADAVSLQTAAGFSANGAQ  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
             +A+A +GVEELGRSGV VGESG+ YA GDA AAA+YL + G
Sbjct  61   QSAVAAQGVEELGRSGVGVGESGVSYATGDAQAAASYLTARG  102


>gi|240171484|ref|ZP_04750143.1| PE domain-containing protein [Mycobacterium kansasii ATCC 12478]
Length=113

 Score =  110 bits (275),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 70/101 (70%), Positives = 77/101 (77%), Gaps = 0/101 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            VTL VVPEGL AASAA+EALT RLAAAHA A P IT V  PAADPVS+QSAV     GS 
Sbjct  12   VTLSVVPEGLIAASAAIEALTTRLAAAHAAAVPLITVVAPPAADPVSVQSAVEAGVRGSA  71

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSG  101
            HAA+A  G+E+LGRSGVAV ES   YA GDAVAA +YL +G
Sbjct  72   HAAVAARGLEDLGRSGVAVAESATTYATGDAVAAVSYLSAG  112


>gi|240169093|ref|ZP_04747752.1| hypothetical protein MkanA1_07254 [Mycobacterium kansasii ATCC 
12478]
Length=103

 Score =  110 bits (275),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 79/100 (79%), Positives = 84/100 (84%), Gaps = 0/100 (0%)

Query  3    LRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSEHA  62
            LRVVPEGLAAASAAVEALTARL AAHAGAAP ITAVV PAADPVS+ +A GFS  G  HA
Sbjct  2    LRVVPEGLAAASAAVEALTARLTAAHAGAAPLITAVVPPAADPVSVATAAGFSVQGDIHA  61

Query  63   AIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
             +A  GVEELGRSG A+GESGIGYAAGDAVAA  Y +SGG
Sbjct  62   TVAAGGVEELGRSGAALGESGIGYAAGDAVAACAYGISGG  101


>gi|118617769|ref|YP_906101.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183983006|ref|YP_001851297.1| PE family protein [Mycobacterium marinum M]
 gi|118569879|gb|ABL04630.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183176332|gb|ACC41442.1| PE family protein [Mycobacterium marinum M]
Length=101

 Score =  109 bits (272),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 72/97 (75%), Positives = 81/97 (84%), Gaps = 0/97 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           + LRVVPEGL A SAAVEALTARLAAA+A  AP ITAVV PAADPVSL++A+GFSA G E
Sbjct  1   MVLRVVPEGLVATSAAVEALTARLAAANAALAPLITAVVPPAADPVSLEAAIGFSAHGVE  60

Query  61  HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATY  97
           H A+  EG+EELGRSGV VGESG+ YA+GDA AA TY
Sbjct  61  HVAVTTEGIEELGRSGVGVGESGLSYASGDAAAALTY  97


>gi|118616921|ref|YP_905253.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183980572|ref|YP_001848863.1| PE family protein, PE5 [Mycobacterium marinum M]
 gi|118569031|gb|ABL03782.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183173898|gb|ACC39008.1| PE family protein, PE5 [Mycobacterium marinum M]
Length=102

 Score =  108 bits (270),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 78/101 (78%), Positives = 88/101 (88%), Gaps = 0/101 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGLAAASAAVEALTARLAAAHA A+P I+AVV  A DPVSLQ+A GFSA G E
Sbjct  1    MTLRVVPEGLAAASAAVEALTARLAAAHASASPVISAVVPAAVDPVSLQTAAGFSAQGIE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSG  101
            HAA+A EGVEELGR+G+ VGESG+ Y AGDAVAAATY ++G
Sbjct  61   HAAVAAEGVEELGRAGLGVGESGVSYLAGDAVAAATYGIAG  101


>gi|108797353|ref|YP_637550.1| PE-like protein [Mycobacterium sp. MCS]
 gi|119866438|ref|YP_936390.1| PE domain-containing protein [Mycobacterium sp. KMS]
 gi|126432975|ref|YP_001068666.1| PE domain-containing protein [Mycobacterium sp. JLS]
 gi|108767772|gb|ABG06494.1| PE-like protein [Mycobacterium sp. MCS]
 gi|119692527|gb|ABL89600.1| PE domain protein [Mycobacterium sp. KMS]
 gi|126232775|gb|ABN96175.1| PE domain protein [Mycobacterium sp. JLS]
Length=102

 Score =  108 bits (269),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 69/102 (68%), Positives = 82/102 (81%), Gaps = 0/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGL AASAAVEALTARLA+AHA AAP I  V+ PAAD VSLQ+A G SA G  
Sbjct  1    MTLRVVPEGLTAASAAVEALTARLASAHAAAAPLIGTVLPPAADAVSLQTAAGLSANGGR  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            H A+A +GV+ELGRSGV VG+SG  YAAGDA+ A+ Y+++ G
Sbjct  61   HEAVAAQGVQELGRSGVGVGQSGASYAAGDAMNASAYMIARG  102


>gi|15839671|ref|NP_334708.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31791464|ref|NP_853957.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57116715|ref|YP_177710.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 81 more sequence titles
 gi|121636200|ref|YP_976423.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148660051|ref|YP_001281574.1| PE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148821483|ref|YP_001286237.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|167967059|ref|ZP_02549336.1| PE family protein [Mycobacterium tuberculosis H37Ra]
 gi|224988673|ref|YP_002643360.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253797212|ref|YP_003030213.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|254230659|ref|ZP_04923986.1| PE family protein [Mycobacterium tuberculosis C]
 gi|254363260|ref|ZP_04979306.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|254549231|ref|ZP_05139678.1| PE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289441665|ref|ZP_06431409.1| PE family protein [Mycobacterium tuberculosis T46]
 gi|289445824|ref|ZP_06435568.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289552541|ref|ZP_06441751.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289568199|ref|ZP_06448426.1| PE family protein [Mycobacterium tuberculosis T17]
 gi|289572870|ref|ZP_06453097.1| PE family protein [Mycobacterium tuberculosis K85]
 gi|289748056|ref|ZP_06507434.1| predicted protein [Mycobacterium tuberculosis 02_1987]
 gi|289748767|ref|ZP_06508145.1| PE family protein [Mycobacterium tuberculosis T92]
 gi|289752318|ref|ZP_06511696.1| predicted protein [Mycobacterium tuberculosis EAS054]
 gi|289756350|ref|ZP_06515728.1| predicted protein [Mycobacterium tuberculosis T85]
 gi|289760396|ref|ZP_06519774.1| PE family protein [Mycobacterium tuberculosis GM 1503]
 gi|294995043|ref|ZP_06800734.1| PE family protein [Mycobacterium tuberculosis 210]
 gi|297632773|ref|ZP_06950553.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297729748|ref|ZP_06958866.1| PE family protein [Mycobacterium tuberculosis KZN R506]
 gi|298523756|ref|ZP_07011165.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306774382|ref|ZP_07412719.1| PE family protein [Mycobacterium tuberculosis SUMu001]
 gi|306779126|ref|ZP_07417463.1| PE family protein [Mycobacterium tuberculosis SUMu002]
 gi|306782912|ref|ZP_07421234.1| PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|306787281|ref|ZP_07425603.1| PE family protein [Mycobacterium tuberculosis SUMu004]
 gi|306791835|ref|ZP_07430137.1| PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|306795879|ref|ZP_07434181.1| PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|306801880|ref|ZP_07438548.1| PE family protein [Mycobacterium tuberculosis SUMu008]
 gi|306806090|ref|ZP_07442758.1| PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|306966288|ref|ZP_07478949.1| PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|306970486|ref|ZP_07483147.1| PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|307078211|ref|ZP_07487381.1| PE family protein [Mycobacterium tuberculosis SUMu011]
 gi|307082764|ref|ZP_07491877.1| PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|313657075|ref|ZP_07813955.1| PE family protein [Mycobacterium tuberculosis KZN V2475]
 gi|339630360|ref|YP_004722002.1| PE family protein [Mycobacterium africanum GM041182]
 gi|340625323|ref|YP_004743775.1| PE family protein [Mycobacterium canettii CIPT 140010059]
 gi|7478571|pir||C70836 probable PE protein - Mycobacterium tuberculosis (strain H37RV)
 gi|13879792|gb|AAK44522.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31617050|emb|CAD93157.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|38490166|emb|CAE55265.1| PE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|121491847|emb|CAL70310.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599718|gb|EAY58728.1| PE family protein [Mycobacterium tuberculosis C]
 gi|134148774|gb|EBA40819.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|148504203|gb|ABQ72012.1| PE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148720010|gb|ABR04635.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|224771786|dbj|BAH24592.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253318715|gb|ACT23318.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289414584|gb|EFD11824.1| PE family protein [Mycobacterium tuberculosis T46]
 gi|289418782|gb|EFD15983.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289437173|gb|EFD19666.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289537301|gb|EFD41879.1| PE family protein [Mycobacterium tuberculosis K85]
 gi|289541952|gb|EFD45601.1| PE family protein [Mycobacterium tuberculosis T17]
 gi|289688584|gb|EFD56072.1| predicted protein [Mycobacterium tuberculosis 02_1987]
 gi|289689354|gb|EFD56783.1| PE family protein [Mycobacterium tuberculosis T92]
 gi|289692905|gb|EFD60334.1| predicted protein [Mycobacterium tuberculosis EAS054]
 gi|289707902|gb|EFD71918.1| PE family protein [Mycobacterium tuberculosis GM 1503]
 gi|289711914|gb|EFD75926.1| predicted protein [Mycobacterium tuberculosis T85]
 gi|298493550|gb|EFI28844.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308217028|gb|EFO76427.1| PE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308327903|gb|EFP16754.1| PE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308332260|gb|EFP21111.1| PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308336028|gb|EFP24879.1| PE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308339632|gb|EFP28483.1| PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308343643|gb|EFP32494.1| PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308347414|gb|EFP36265.1| PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308351358|gb|EFP40209.1| PE family protein [Mycobacterium tuberculosis SUMu008]
 gi|308355990|gb|EFP44841.1| PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308359936|gb|EFP48787.1| PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308363846|gb|EFP52697.1| PE family protein [Mycobacterium tuberculosis SUMu011]
 gi|308367516|gb|EFP56367.1| PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|323721321|gb|EGB30375.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
 gi|326906040|gb|EGE52973.1| PE family protein [Mycobacterium tuberculosis W-148]
 gi|328457000|gb|AEB02423.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|339293344|gb|AEJ45455.1| PE family protein [Mycobacterium tuberculosis CCDC5079]
 gi|339296992|gb|AEJ49102.1| PE family protein [Mycobacterium tuberculosis CCDC5180]
 gi|339329716|emb|CCC25359.1| PE family protein [Mycobacterium africanum GM041182]
 gi|340003513|emb|CCC42634.1| PE family protein [Mycobacterium canettii CIPT 140010059]
 gi|341600216|emb|CCC62886.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
 gi|344218106|gb|AEM98736.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=102

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 82/102 (81%), Positives = 86/102 (85%), Gaps = 0/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            HA +  EGVEELGR+GV VGESG  Y AGDA AAATY V GG
Sbjct  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102


>gi|118467190|ref|YP_883991.1| PE family protein [Mycobacterium avium 104]
 gi|118168477|gb|ABK69374.1| pe family protein [Mycobacterium avium 104]
 gi|212595842|gb|ACJ35527.1| PE11 [Mycobacterium avium subsp. avium]
Length=102

 Score =  105 bits (263),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 77/101 (77%), Positives = 88/101 (88%), Gaps = 0/101 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGLAA SAAVEALTARLAAAHA AAPAITAVV PAADPVSLQ+A+GFSA G E
Sbjct  1    MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSG  101
            H+A+A +GVEELGR+GV VGE+G  Y AGD  AAAT+ ++G
Sbjct  61   HSAVAAQGVEELGRAGVGVGEAGASYLAGDTAAAATFGIAG  101


>gi|41409879|ref|NP_962715.1| hypothetical protein MAP3781 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398711|gb|AAS06331.1| hypothetical protein MAP_3781 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=102

 Score =  104 bits (260),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 76/101 (76%), Positives = 88/101 (88%), Gaps = 0/101 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGLAA SAAVEALTARLAAAHA AAPAITAVV PAADPVSLQ+A+GFSA G E
Sbjct  1    MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSG  101
            H+A+A +GVEELGR+GV VG++G  Y AGD  AAAT+ ++G
Sbjct  61   HSAVAAQGVEELGRAGVGVGQAGASYLAGDTAAAATFGIAG  101


>gi|296167588|ref|ZP_06849913.1| PE-family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897131|gb|EFG76742.1| PE-family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=102

 Score =  104 bits (260),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 77/97 (80%), Positives = 85/97 (88%), Gaps = 0/97 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           +TLRVVPEGLAA SAAVEALTARLAAAHA AAPAITAVV PA DPVS+Q+AVGFSA GSE
Sbjct  1   MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSVQTAVGFSAQGSE  60

Query  61  HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATY  97
           HAA+A +GVEELGR+GV VGE+G  Y AGD  AAAT+
Sbjct  61  HAAVAAQGVEELGRAGVGVGEAGASYLAGDTAAAATF  97


>gi|240168499|ref|ZP_04747158.1| PE family protein, PE5 [Mycobacterium kansasii ATCC 12478]
Length=104

 Score =  104 bits (259),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 83/102 (82%), Positives = 87/102 (86%), Gaps = 0/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGLAAASAAVEALTARLAAA A AAP ITAVV PAADPVSLQ+A GFS  G E
Sbjct  1    MTLRVVPEGLAAASAAVEALTARLAAAQAAAAPLITAVVPPAADPVSLQTAAGFSGQGVE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            HAAI  EGVEELGRSGV VGE+G+ YA GDA AAATYL SGG
Sbjct  61   HAAIVAEGVEELGRSGVGVGEAGVSYAVGDAAAAATYLASGG  102


>gi|120401439|ref|YP_951268.1| PE domain-containing protein [Mycobacterium vanbaalenii PYR-1]
 gi|119954257|gb|ABM11262.1| PE domain protein [Mycobacterium vanbaalenii PYR-1]
Length=102

 Score =  103 bits (258),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 71/102 (70%), Positives = 86/102 (85%), Gaps = 0/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGL AA AAVEALTAR+AAAHA AAP +TAV+ PAAD VSLQ+A GFSA  +E
Sbjct  1    MTLRVVPEGLTAAGAAVEALTARMAAAHAAAAPVVTAVLPPAADVVSLQAATGFSARAAE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            H ++A +GVEELGRSG+AVGES   YA GDA+AA++YL++ G
Sbjct  61   HQSVAAQGVEELGRSGIAVGESAASYAGGDAMAASSYLIARG  102


>gi|254818902|ref|ZP_05223903.1| PE family protein [Mycobacterium intracellulare ATCC 13950]
 gi|212596327|gb|ACJ35569.1| PE11 [Mycobacterium intracellulare ATCC 13950]
Length=102

 Score =  102 bits (253),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 75/101 (75%), Positives = 87/101 (87%), Gaps = 0/101 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPEGLAA SAAVEALTARLAAAHA AAPAITAVV PA DPVSLQ+A+GFSA G E
Sbjct  1    MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSLQTAMGFSAQGQE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSG  101
            H+A+A +GVEELGR+G+ VGE+G  Y AGD  AAAT+ ++G
Sbjct  61   HSAMAVQGVEELGRAGLGVGEAGASYLAGDTAAAATFGIAG  101


>gi|240173309|ref|ZP_04751967.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=104

 Score =  100 bits (248),  Expect = 9e-20, Method: Compositional matrix adjust.
 Identities = 77/102 (76%), Positives = 85/102 (84%), Gaps = 0/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TL+VVPEGLAAAS AVEALTARLAAAHA A PAITAVV PAADPVS+Q+A GFS  GS 
Sbjct  1    MTLQVVPEGLAAASGAVEALTARLAAAHAAALPAITAVVPPAADPVSIQTAAGFSTHGSA  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            HAA+  EG+EELGRSG+ V ESG+ YAAGDA AA TY  SGG
Sbjct  61   HAAVVAEGIEELGRSGIGVAESGVSYAAGDAAAAVTYSASGG  102


>gi|118619480|ref|YP_907812.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|118571590|gb|ABL06341.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=104

 Score = 98.6 bits (244),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 65/86 (76%), Positives = 75/86 (88%), Gaps = 0/86 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           V LRV+PEGLA ASAAV  LTARLAAAHA AAPAITAV+ PAADPVS+++A GFSA+G E
Sbjct  2   VMLRVIPEGLAGASAAVAGLTARLAAAHAVAAPAITAVIPPAADPVSVRNAAGFSAVGVE  61

Query  61  HAAIAGEGVEELGRSGVAVGESGIGY  86
           H+A+A EG+EELGRSGV VGE+GI Y
Sbjct  62  HSAMATEGIEELGRSGVGVGEAGISY  87


>gi|15827194|ref|NP_301457.1| PE-family protein [Mycobacterium leprae TN]
 gi|221229672|ref|YP_002503088.1| PE-family protein [Mycobacterium leprae Br4923]
 gi|13092742|emb|CAC30046.1| PE-family protein [Mycobacterium leprae]
 gi|219932779|emb|CAR70631.1| PE-family protein [Mycobacterium leprae Br4923]
Length=102

 Score = 98.6 bits (244),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 56/104 (54%), Positives = 69/104 (67%), Gaps = 2/104 (1%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TL V+PEGL  ASA +EALTA LA  HA AAP I  V+ P +  VS+Q+ VGF+  G +
Sbjct  1    MTLGVIPEGLEGASAVIEALTAHLATVHAEAAPFIMEVIPPGSGSVSVQNQVGFNVHGCQ  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGGSL  104
            + A+   G EELGR GV V ESG+ YA  DA A A+YL  GG L
Sbjct  61   YVAMTAHGAEELGRWGVGVAESGVSYALRDAFAVASYL--GGGL  102


>gi|333988933|ref|YP_004521547.1| PE family protein PE5 [Mycobacterium sp. JDM601]
 gi|333484901|gb|AEF34293.1| PE family protein PE5 [Mycobacterium sp. JDM601]
Length=103

 Score = 98.6 bits (244),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 74/99 (75%), Positives = 83/99 (84%), Gaps = 0/99 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           +TL VVPEGLAAASAAVEALTARLAAA A AAP ITAVV PAADPVSLQ+A GFSA G+E
Sbjct  1   MTLNVVPEGLAAASAAVEALTARLAAAQAAAAPLITAVVPPAADPVSLQTAAGFSAQGTE  60

Query  61  HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLV  99
           HAA+A +G  ELGR+GV VGESG+ YAAGDA  A+ Y +
Sbjct  61  HAAVAAQGATELGRAGVGVGESGVNYAAGDAAGASRYFM  99


>gi|254777309|ref|ZP_05218825.1| hypothetical protein MaviaA2_21931 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=98

 Score = 97.4 bits (241),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 73/97 (76%), Positives = 84/97 (87%), Gaps = 0/97 (0%)

Query  5    VVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSEHAAI  64
            +VPEGLAA SAAVEALTARLAAAHA AAPAITAVV PAADPVSLQ+A+GFSA G EH+A+
Sbjct  1    MVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQEHSAV  60

Query  65   AGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSG  101
            A +GVEELGR+GV VGE+G  Y AGD  AAAT+ ++G
Sbjct  61   AAQGVEELGRAGVGVGEAGASYLAGDTAAAATFGIAG  97


>gi|240170992|ref|ZP_04749651.1| hypothetical protein MkanA1_16900 [Mycobacterium kansasii ATCC 
12478]
Length=104

 Score = 97.1 bits (240),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 81/102 (80%), Positives = 88/102 (87%), Gaps = 0/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TL VVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+ +G SALG+E
Sbjct  1    MTLWVVPEGLAAASAAVEALTARLAAAHAAAAPVITAVVPPAADPVSLQTGIGLSALGNE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            H A+A E VEELGRSGV VGESG+ YAAGDA AA TYL +GG
Sbjct  61   HVAMAAEAVEELGRSGVGVGESGVSYAAGDAAAAGTYLGAGG  102


>gi|169627151|ref|YP_001700800.1| PE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169629317|ref|YP_001702966.1| PE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169239118|emb|CAM60146.1| Probable PE family protein [Mycobacterium abscessus]
 gi|169241284|emb|CAM62312.1| Hypothetical PE family protein [Mycobacterium abscessus]
Length=102

 Score = 95.1 bits (235),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 66/102 (65%), Positives = 77/102 (76%), Gaps = 0/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            + L VVPEGL A SAAVEALTARLAAAHA AAP I AVV PAADPVSL++A GFSA G E
Sbjct  1    MNLNVVPEGLTATSAAVEALTARLAAAHAAAAPVIGAVVPPAADPVSLETAAGFSARGIE  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            H+ +A + VEELGR+G+ V ES   Y  GD  AAA Y+++ G
Sbjct  61   HSGVAAQAVEELGRAGLGVSESAASYTTGDMQAAAAYMIARG  102


>gi|342859231|ref|ZP_08715885.1| hypothetical protein MCOL_10143 [Mycobacterium colombiense CECT 
3035]
 gi|342133472|gb|EGT86675.1| hypothetical protein MCOL_10143 [Mycobacterium colombiense CECT 
3035]
Length=98

 Score = 94.0 bits (232),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 71/97 (74%), Positives = 82/97 (85%), Gaps = 0/97 (0%)

Query  5    VVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSEHAAI  64
            +VPEGLAA SAAVEALTARLAAAHA AAPAITAVV PA DPVSLQ+A GFSA G EH+A+
Sbjct  1    MVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSLQTAAGFSAQGQEHSAM  60

Query  65   AGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSG  101
            A +GVEELGR+GV VG++G  Y AGD  AAAT+ ++G
Sbjct  61   AAQGVEELGRAGVGVGQAGASYLAGDTAAAATFGIAG  97


>gi|317506395|ref|ZP_07964203.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
 gi|316255311|gb|EFV14573.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
Length=102

 Score = 93.2 bits (230),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 66/97 (69%), Positives = 73/97 (76%), Gaps = 0/97 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           + L+VVPEGL AASA VEALTARLAAA A AAP I AVV PAADPVSLQ+A GFSA GS 
Sbjct  1   MILKVVPEGLMAASAEVEALTARLAAAQAAAAPVIGAVVPPAADPVSLQAAAGFSARGSS  60

Query  61  HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATY  97
           H A+A E VEELGRSG+ V E+   YA GD   AA +
Sbjct  61  HTAVAAEAVEELGRSGLGVAETAESYAVGDLQGAAVF  97


>gi|240173110|ref|ZP_04751768.1| PE-family protein [Mycobacterium kansasii ATCC 12478]
Length=102

 Score = 89.4 bits (220),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 69/90 (77%), Positives = 75/90 (84%), Gaps = 0/90 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           +TLRVVPEGLAAASAAVEALTARLAAAHA AAP+I AVV PA DPVSLQ+A  FS  G E
Sbjct  1   MTLRVVPEGLAAASAAVEALTARLAAAHAAAAPSIVAVVPPAVDPVSLQTAAEFSVQGQE  60

Query  61  HAAIAGEGVEELGRSGVAVGESGIGYAAGD  90
           HA +A +GVEELGR+GV VGESG  Y AGD
Sbjct  61  HAVVATQGVEELGRAGVGVGESGASYLAGD  90


>gi|41406220|ref|NP_959056.1| hypothetical protein MAP0122 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118464188|ref|YP_879413.1| PE family protein [Mycobacterium avium 104]
 gi|41394568|gb|AAS02439.1| PE_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118165475|gb|ABK66372.1| PE family protein [Mycobacterium avium 104]
 gi|336458087|gb|EGO37073.1| PE family protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=101

 Score = 88.2 bits (217),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 62/101 (62%), Positives = 80/101 (80%), Gaps = 0/101 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRV+PEGLAA SAAV+A+TA+LAA HA AAP ++ VV PAADPVSL +A  FS  GS+
Sbjct  1    MTLRVIPEGLAATSAAVDAITAQLAAVHAAAAPVVSVVVPPAADPVSLAAAAVFSERGSQ  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSG  101
            H+A A +GVE LGR+G+ V  +G+ Y AGDA +A+TYL +G
Sbjct  61   HSAAATKGVEVLGRAGLGVSLAGVNYVAGDAASASTYLSAG  101


>gi|336460186|gb|EGO39090.1| PE family protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=80

 Score = 87.0 bits (214),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 66/80 (83%), Positives = 73/80 (92%), Gaps = 0/80 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           +TLRVVPEGLAA SAAVEALTARLAAAHA AAPAITAVV PAADPVSLQ+A+GFSA G E
Sbjct  1   MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE  60

Query  61  HAAIAGEGVEELGRSGVAVG  80
           H+A+A +GVEELGR+GV VG
Sbjct  61  HSAVAAQGVEELGRAGVGVG  80


>gi|254773162|ref|ZP_05214678.1| PE family protein [Mycobacterium avium subsp. avium ATCC 25291]
 gi|212595728|gb|ACJ35519.1| PE1 [Mycobacterium avium subsp. avium]
Length=101

 Score = 87.0 bits (214),  Expect = 8e-16, Method: Compositional matrix adjust.
 Identities = 61/101 (61%), Positives = 79/101 (79%), Gaps = 0/101 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRV+PEGLAA SAAV+ +TA+LAA HA AAP ++ VV PAADPVSL +A  FS  GS+
Sbjct  1    MTLRVIPEGLAATSAAVDVITAQLAAVHAAAAPVVSVVVPPAADPVSLAAAAVFSERGSQ  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSG  101
            H+A A +GVE LGR+G+ V  +G+ Y AGDA +A+TYL +G
Sbjct  61   HSAAATKGVEVLGRAGLGVSLAGVNYVAGDAASASTYLSAG  101


>gi|342860175|ref|ZP_08716827.1| PE family protein [Mycobacterium colombiense CECT 3035]
 gi|342132553|gb|EGT85782.1| PE family protein [Mycobacterium colombiense CECT 3035]
Length=101

 Score = 85.5 bits (210),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 62/101 (62%), Positives = 79/101 (79%), Gaps = 0/101 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRV+PEGLAA SAAV+A+TA+LAA HA AAP ++ VV PAADPVSL +A  FS  GS+
Sbjct  1    MTLRVLPEGLAATSAAVDAITAQLAAVHAAAAPVVSVVVPPAADPVSLVAAAVFSERGSQ  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSG  101
            H+A A +GVE LGR+G+ V  +G+ Y AGDA  A+TYL +G
Sbjct  61   HSAAAAKGVEVLGRAGLGVSLAGVNYVAGDAAGASTYLGAG  101


>gi|169627767|ref|YP_001701416.1| PE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169239734|emb|CAM60762.1| PE family protein [Mycobacterium abscessus]
Length=102

 Score = 85.5 bits (210),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 61/98 (63%), Positives = 67/98 (69%), Gaps = 0/98 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           ++L VVPEGL AASAAVEALTARLAA +A AAP I AV+ PAADPVS+QSA  FSA G E
Sbjct  1   MSLNVVPEGLTAASAAVEALTARLAAVNAAAAPVIGAVMPPAADPVSMQSAALFSAHGLE  60

Query  61  HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYL  98
                     ELGRSGV   E+   Y  GD  AAATYL
Sbjct  61  RTGAGARAAYELGRSGVGATEAAASYTVGDIQAAATYL  98


>gi|340626400|ref|YP_004744852.1| PE family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004590|emb|CCC43734.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=102

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 71/102 (70%), Positives = 83/102 (82%), Gaps = 1/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS  GS+
Sbjct  1    MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            H A+A +GVEELGRSGV V ESG  YAAGDA+AAA+YL SGG
Sbjct  61   HVAMAAQGVEELGRSGVGVAESGASYAAGDALAAASYL-SGG  101


>gi|15840844|ref|NP_335881.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31792580|ref|NP_855073.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57116857|ref|YP_177805.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 76 more sequence titles
 gi|121637316|ref|YP_977539.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148661177|ref|YP_001282700.1| PE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148822606|ref|YP_001287360.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|167966849|ref|ZP_02549126.1| PE family protein [Mycobacterium tuberculosis H37Ra]
 gi|224989791|ref|YP_002644478.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253799565|ref|YP_003032566.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|254231634|ref|ZP_04924961.1| PE family protein [Mycobacterium tuberculosis C]
 gi|254550399|ref|ZP_05140846.1| PE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289442829|ref|ZP_06432573.1| PE family protein [Mycobacterium tuberculosis T46]
 gi|289446981|ref|ZP_06436725.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289554824|ref|ZP_06444034.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289569401|ref|ZP_06449628.1| PE family protein [Mycobacterium tuberculosis T17]
 gi|289574052|ref|ZP_06454279.1| PE family protein [Mycobacterium tuberculosis K85]
 gi|289749940|ref|ZP_06509318.1| PE family protein [Mycobacterium tuberculosis T92]
 gi|289753466|ref|ZP_06512844.1| PE family protein [Mycobacterium tuberculosis EAS054]
 gi|289757492|ref|ZP_06516870.1| PE family protein [Mycobacterium tuberculosis T85]
 gi|289761544|ref|ZP_06520922.1| PE family protein [Mycobacterium tuberculosis GM 1503]
 gi|294994946|ref|ZP_06800637.1| PE family protein [Mycobacterium tuberculosis 210]
 gi|297633939|ref|ZP_06951719.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297730928|ref|ZP_06960046.1| PE family protein [Mycobacterium tuberculosis KZN R506]
 gi|298524891|ref|ZP_07012300.1| pe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306775567|ref|ZP_07413904.1| PE family protein [Mycobacterium tuberculosis SUMu001]
 gi|306780715|ref|ZP_07419052.1| PE family protein [Mycobacterium tuberculosis SUMu002]
 gi|306784115|ref|ZP_07422437.1| PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|306788483|ref|ZP_07426805.1| PE family protein [Mycobacterium tuberculosis SUMu004]
 gi|306792807|ref|ZP_07431109.1| PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|306797208|ref|ZP_07435510.1| PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|306803089|ref|ZP_07439757.1| PE family protein [Mycobacterium tuberculosis SUMu008]
 gi|306807285|ref|ZP_07443953.1| PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|306967483|ref|ZP_07480144.1| PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|306971676|ref|ZP_07484337.1| PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|307079387|ref|ZP_07488557.1| PE family protein [Mycobacterium tuberculosis SUMu011]
 gi|307083955|ref|ZP_07493068.1| PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|313658261|ref|ZP_07815141.1| PE family protein [Mycobacterium tuberculosis KZN V2475]
 gi|339631453|ref|YP_004723095.1| PE family protein [Mycobacterium africanum GM041182]
 gi|61229780|sp|P0A682.1|PE15_MYCTU RecName: Full=Uncharacterized PE family protein PE15; Flags: 
Precursor
 gi|61229781|sp|P0A683.1|PE15_MYCBO RecName: Full=Uncharacterized PE family protein PE15; Flags: 
Precursor
 gi|13881042|gb|AAK45695.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31618169|emb|CAD94282.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|38490263|emb|CAE55383.1| PE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|121492963|emb|CAL71434.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124600693|gb|EAY59703.1| PE family protein [Mycobacterium tuberculosis C]
 gi|148505329|gb|ABQ73138.1| PE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148721133|gb|ABR05758.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|224772904|dbj|BAH25710.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321068|gb|ACT25671.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289415748|gb|EFD12988.1| PE family protein [Mycobacterium tuberculosis T46]
 gi|289419939|gb|EFD17140.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289439456|gb|EFD21949.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289538483|gb|EFD43061.1| PE family protein [Mycobacterium tuberculosis K85]
 gi|289543155|gb|EFD46803.1| PE family protein [Mycobacterium tuberculosis T17]
 gi|289690527|gb|EFD57956.1| PE family protein [Mycobacterium tuberculosis T92]
 gi|289694053|gb|EFD61482.1| PE family protein [Mycobacterium tuberculosis EAS054]
 gi|289709050|gb|EFD73066.1| PE family protein [Mycobacterium tuberculosis GM 1503]
 gi|289713056|gb|EFD77068.1| PE family protein [Mycobacterium tuberculosis T85]
 gi|298494685|gb|EFI29979.1| pe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308215947|gb|EFO75346.1| PE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308326459|gb|EFP15310.1| PE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308331182|gb|EFP20033.1| PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308334937|gb|EFP23788.1| PE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308338769|gb|EFP27620.1| PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308342468|gb|EFP31319.1| PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308346309|gb|EFP35160.1| PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308350237|gb|EFP39088.1| PE family protein [Mycobacterium tuberculosis SUMu008]
 gi|308354880|gb|EFP43731.1| PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308358821|gb|EFP47672.1| PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308362743|gb|EFP51594.1| PE family protein [Mycobacterium tuberculosis SUMu011]
 gi|308366388|gb|EFP55239.1| PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|323720139|gb|EGB29243.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
 gi|326903008|gb|EGE49941.1| PE family protein [Mycobacterium tuberculosis W-148]
 gi|328459313|gb|AEB04736.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|339294365|gb|AEJ46476.1| PE family protein [Mycobacterium tuberculosis CCDC5079]
 gi|339298002|gb|AEJ50112.1| PE family protein [Mycobacterium tuberculosis CCDC5180]
 gi|339330809|emb|CCC26480.1| PE family protein [Mycobacterium africanum GM041182]
 gi|341601335|emb|CCC64008.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
 gi|344219216|gb|AEM99846.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=102

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 70/102 (69%), Positives = 82/102 (81%), Gaps = 1/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS  GS+
Sbjct  1    MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            H A+A +GVEELGRSGV V ESG  YAA DA+AAA+YL SGG
Sbjct  61   HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGG  101


>gi|254364274|ref|ZP_04980320.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|134149788|gb|EBA41833.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=102

 Score = 82.8 bits (203),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 69/102 (68%), Positives = 81/102 (80%), Gaps = 1/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRVVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ + V FS  GS+
Sbjct  1    MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNTVEFSVHGSQ  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            H A+A +GVEELGRSGV V ESG  YAA DA+AAA+YL SGG
Sbjct  61   HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGG  101


>gi|240168395|ref|ZP_04747054.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=104

 Score = 82.8 bits (203),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 64/90 (72%), Positives = 72/90 (80%), Gaps = 0/90 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           +TL VVPEGL  A+AAVEAL+ARLAAAHA AAP IT VVAPAADPVSL++A G SA G  
Sbjct  1   MTLWVVPEGLTGAAAAVEALSARLAAAHAAAAPLITGVVAPAADPVSLRTAAGLSACGVH  60

Query  61  HAAIAGEGVEELGRSGVAVGESGIGYAAGD  90
           H  IA EGVEEL RSGV +GE+G+ Y AGD
Sbjct  61  HVGIATEGVEELARSGVGIGEAGVSYTAGD  90


>gi|240173532|ref|ZP_04752190.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=108

 Score = 80.9 bits (198),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 70/101 (70%), Positives = 80/101 (80%), Gaps = 0/101 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            VTL VVPEGLA A+AAVEAL+ARLAAAHA AAP I+AVVAP ADPVSL +A GFSA G E
Sbjct  5    VTLWVVPEGLAGAAAAVEALSARLAAAHAAAAPMISAVVAPXADPVSLSTAAGFSAGGIE  64

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSG  101
            H  +A E VEEL RSG  +G +GI YAAGD+ AA TY ++G
Sbjct  65   HVGVATEAVEELTRSGAGLGTAGISYAAGDSAAALTYGLAG  105


>gi|212596236|gb|ACJ35562.1| PE1 [Mycobacterium intracellulare ATCC 13950]
Length=105

 Score = 80.9 bits (198),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 68/102 (67%), Positives = 82/102 (81%), Gaps = 0/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRV+PEGLAA SAAVEA+TA+LAAAHA AAP ++AVV PAADPVSL +A  FS  GS+
Sbjct  4    MTLRVLPEGLAATSAAVEAITAQLAAAHAAAAPVVSAVVPPAADPVSLGAAAVFSGRGSQ  63

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            H A A +GVE LGR+G+ V  +G+GYAA DA  AATYL +GG
Sbjct  64   HTAAAAKGVEVLGRAGLGVSLAGVGYAAQDAADAATYLGAGG  105


>gi|183985227|ref|YP_001853518.1| PE family protein, PE5_1 [Mycobacterium marinum M]
 gi|183178553|gb|ACC43663.1| PE family protein, PE5_1 [Mycobacterium marinum M]
Length=103

 Score = 80.5 bits (197),  Expect = 8e-14, Method: Compositional matrix adjust.
 Identities = 65/86 (76%), Positives = 76/86 (89%), Gaps = 0/86 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           + LRV+PEGLA ASAAV ALTARLAAAHA AAPAITAV+ PAADPVS+++A GFSA+G E
Sbjct  1   MMLRVIPEGLAGASAAVAALTARLAAAHAVAAPAITAVIPPAADPVSVRNAAGFSAVGVE  60

Query  61  HAAIAGEGVEELGRSGVAVGESGIGY  86
           H+A+A EG+EELGRSGV VGE+GI Y
Sbjct  61  HSAMATEGIEELGRSGVGVGEAGISY  86


>gi|254821558|ref|ZP_05226559.1| PE family protein [Mycobacterium intracellulare ATCC 13950]
Length=102

 Score = 80.5 bits (197),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 68/102 (67%), Positives = 82/102 (81%), Gaps = 0/102 (0%)

Query  1    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
            +TLRV+PEGLAA SAAVEA+TA+LAAAHA AAP ++AVV PAADPVSL +A  FS  GS+
Sbjct  1    MTLRVLPEGLAATSAAVEAITAQLAAAHAAAAPVVSAVVPPAADPVSLGAAAVFSGRGSQ  60

Query  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102
            H A A +GVE LGR+G+ V  +G+GYAA DA  AATYL +GG
Sbjct  61   HTAAAAKGVEVLGRAGLGVSLAGVGYAAQDAADAATYLGAGG  102


>gi|183983962|ref|YP_001852253.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183177288|gb|ACC42398.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=103

 Score = 79.0 bits (193),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 60/83 (73%), Positives = 69/83 (84%), Gaps = 0/83 (0%)

Query  1   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60
           +TL+VVPEGL AASAAV+A+TARLAAAHA AAPAI+AVV PA DPVSLQ+AV FSA G E
Sbjct  1   MTLQVVPEGLLAASAAVQAITARLAAAHAAAAPAISAVVPPAVDPVSLQTAVVFSAQGGE  60

Query  61  HAAIAGEGVEELGRSGVAVGESG  83
            A +  +GV+EL RSGV V ESG
Sbjct  61  RALVGVQGVDELARSGVGVAESG  83



Lambda     K      H
   0.311    0.125    0.331 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 127350764394


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40