BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3035 Length=360 Score E Sequences producing significant alignments: (Bits) Value gi|308375970|ref|ZP_07445680.2| hypothetical protein TMGG_02576 ... 719 0.0 gi|15610172|ref|NP_217551.1| hypothetical protein Rv3035 [Mycoba... 716 0.0 gi|289575745|ref|ZP_06455972.1| conserved hypothetical protein [... 715 0.0 gi|340628027|ref|YP_004746479.1| hypothetical protein MCAN_30601... 714 0.0 gi|308232324|ref|ZP_07415677.2| hypothetical protein TMAG_03209 ... 670 0.0 gi|183981681|ref|YP_001849972.1| hypothetical protein MMAR_1667 ... 608 3e-172 gi|254552109|ref|ZP_05142556.1| hypothetical protein Mtube_16936... 607 1e-171 gi|240169567|ref|ZP_04748226.1| hypothetical protein MkanA1_0965... 601 5e-170 gi|118617503|ref|YP_905835.1| hypothetical protein MUL_1903 [Myc... 593 1e-167 gi|254776320|ref|ZP_05217836.1| hypothetical protein MaviaA2_168... 586 2e-165 gi|118462460|ref|YP_883061.1| hypothetical protein MAV_3899 [Myc... 586 2e-165 gi|336459273|gb|EGO38218.1| WD40-like repeat-containing protein ... 585 3e-165 gi|41409181|ref|NP_962017.1| hypothetical protein MAP3083 [Mycob... 584 8e-165 gi|296171172|ref|ZP_06852620.1| Pyrrolo-quinoline quinone [Mycob... 570 1e-160 gi|15827922|ref|NP_302185.1| hypothetical protein ML1720 [Mycoba... 568 7e-160 gi|254821489|ref|ZP_05226490.1| hypothetical protein MintA_16265... 567 9e-160 gi|342858122|ref|ZP_08714777.1| hypothetical protein MCOL_04591 ... 565 3e-159 gi|167970234|ref|ZP_02552511.1| hypothetical protein MtubH3_2029... 513 2e-143 gi|333991399|ref|YP_004524013.1| hypothetical protein JDM601_275... 495 5e-138 gi|118468753|ref|YP_886680.1| hypothetical protein MSMEG_2333 [M... 461 1e-127 gi|315445175|ref|YP_004078054.1| WD40-like repeat protein [Mycob... 454 1e-125 gi|120403086|ref|YP_952915.1| Pyrrolo-quinoline quinone [Mycobac... 452 4e-125 gi|145224844|ref|YP_001135522.1| Pyrrolo-quinoline quinone [Myco... 450 2e-124 gi|126434432|ref|YP_001070123.1| Pyrrolo-quinoline quinone [Myco... 440 1e-121 gi|108798831|ref|YP_639028.1| hypothetical protein Mmcs_1863 [My... 435 6e-120 gi|169630460|ref|YP_001704109.1| hypothetical protein MAB_3379 [... 399 5e-109 gi|111023417|ref|YP_706389.1| hypothetical protein RHA1_ro06456 ... 250 3e-64 gi|312140525|ref|YP_004007861.1| pyrrolo-quinoline quinone dehyd... 245 9e-63 gi|226365918|ref|YP_002783701.1| hypothetical protein ROP_65090 ... 244 1e-62 gi|325675855|ref|ZP_08155539.1| hypothetical protein HMPREF0724_... 244 1e-62 gi|229493367|ref|ZP_04387156.1| PQQ enzyme repeat domain protein... 234 1e-59 gi|226305854|ref|YP_002765814.1| hypothetical protein RER_23670 ... 232 6e-59 gi|54026254|ref|YP_120496.1| hypothetical protein nfa42830 [Noca... 215 8e-54 gi|289763211|ref|ZP_06522589.1| conserved hypothetical protein [... 211 1e-52 gi|317506035|ref|ZP_07963865.1| hypothetical protein HMPREF9336_... 211 2e-52 gi|296394665|ref|YP_003659549.1| hypothetical protein Srot_2268 ... 189 7e-46 gi|296140621|ref|YP_003647864.1| hypothetical protein Tpau_2927 ... 188 1e-45 gi|343926885|ref|ZP_08766378.1| hypothetical protein GOALK_072_0... 187 3e-45 gi|262203155|ref|YP_003274363.1| pyrrolo-quinoline quinone [Gord... 184 2e-44 gi|326381502|ref|ZP_08203196.1| pyrrolo-quinoline quinone [Gordo... 180 4e-43 gi|319949301|ref|ZP_08023379.1| hypothetical protein ES5_07756 [... 132 1e-28 gi|255034566|ref|YP_003085187.1| Pyrrolo-quinoline quinone [Dyad... 132 1e-28 gi|345004696|ref|YP_004807549.1| pyrrolo-quinoline quinone repea... 49.7 8e-04 gi|148557151|ref|YP_001264733.1| pyrrolo-quinoline quinone [Sphi... 46.6 0.006 gi|333988568|ref|YP_004521175.1| PKD domain-containing protein [... 46.2 0.008 gi|339009361|ref|ZP_08641933.1| cell surface protein [Brevibacil... 44.7 0.026 gi|297172108|gb|ADI23090.1| FOG: WD40-like repeat [uncultured ga... 43.9 0.043 gi|301057577|ref|ZP_07198657.1| PQQ enzyme repeat protein [delta... 43.5 0.048 gi|290963109|ref|YP_003494291.1| transmembrane serine/threonine ... 43.1 0.073 gi|313117324|ref|YP_004044307.1| WD-40 repeat-containing protein... 43.1 0.075 >gi|308375970|ref|ZP_07445680.2| hypothetical protein TMGG_02576 [Mycobacterium tuberculosis SUMu007] gi|308344595|gb|EFP33446.1| hypothetical protein TMGG_02576 [Mycobacterium tuberculosis SUMu007] Length=411 Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/360 (100%), Positives = 360/360 (100%), Gaps = 0/360 (0%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY Sbjct 52 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 111 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP Sbjct 112 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 171 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY Sbjct 172 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 231 Query 181 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 240 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA Sbjct 232 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 291 Query 241 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS 300 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS Sbjct 292 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS 351 Query 301 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP Sbjct 352 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 411 >gi|15610172|ref|NP_217551.1| hypothetical protein Rv3035 [Mycobacterium tuberculosis H37Rv] gi|15842599|ref|NP_337636.1| hypothetical protein MT3120 [Mycobacterium tuberculosis CDC1551] gi|31794213|ref|NP_856706.1| hypothetical protein Mb3061 [Mycobacterium bovis AF2122/97] 43 more sequence titles Length=360 Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/360 (99%), Positives = 360/360 (100%), Gaps = 0/360 (0%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 +AAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY Sbjct 1 MAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP Sbjct 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY Sbjct 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 Query 181 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 240 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA Sbjct 181 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 240 Query 241 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS 300 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS Sbjct 241 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS 300 Query 301 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP Sbjct 301 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 >gi|289575745|ref|ZP_06455972.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339633043|ref|YP_004724685.1| hypothetical protein MAF_30420 [Mycobacterium africanum GM041182] gi|289540176|gb|EFD44754.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339332399|emb|CCC28112.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=360 Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/360 (99%), Positives = 359/360 (99%), Gaps = 0/360 (0%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 +AAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY Sbjct 1 MAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP Sbjct 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSS NGTVVVSVWQPGEPAAKLVGLKY Sbjct 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSFNGTVVVSVWQPGEPAAKLVGLKY 180 Query 181 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 240 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA Sbjct 181 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 240 Query 241 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS 300 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS Sbjct 241 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS 300 Query 301 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP Sbjct 301 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 >gi|340628027|ref|YP_004746479.1| hypothetical protein MCAN_30601 [Mycobacterium canettii CIPT 140010059] gi|340006217|emb|CCC45391.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=360 Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/360 (99%), Positives = 360/360 (100%), Gaps = 0/360 (0%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 +AAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY Sbjct 1 MAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP Sbjct 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY Sbjct 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 Query 181 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 240 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA Sbjct 181 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 240 Query 241 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS 300 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS Sbjct 241 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS 300 Query 301 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 GP+HDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP Sbjct 301 GPHHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 >gi|308232324|ref|ZP_07415677.2| hypothetical protein TMAG_03209 [Mycobacterium tuberculosis SUMu001] gi|308369941|ref|ZP_07419581.2| hypothetical protein TMBG_03187 [Mycobacterium tuberculosis SUMu002] gi|308371216|ref|ZP_07424207.2| hypothetical protein TMCG_01451 [Mycobacterium tuberculosis SUMu003] 22 more sequence titles Length=335 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/335 (100%), Positives = 335/335 (100%), Gaps = 0/335 (0%) Query 26 MEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGAIISFPPTQWTRWRQPVIGM 85 MEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGAIISFPPTQWTRWRQPVIGM Sbjct 1 MEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGAIISFPPTQWTRWRQPVIGM 60 Query 86 PSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDGIDPTDATRGLADCAPARPG 145 PSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDGIDPTDATRGLADCAPARPG Sbjct 61 PSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDGIDPTDATRGLADCAPARPG 120 Query 146 CPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQLVREWTSDAVSAGVLASPVLS 205 CPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQLVREWTSDAVSAGVLASPVLS Sbjct 121 CPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQLVREWTSDAVSAGVLASPVLS 180 Query 206 ADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGGGPDTALAAF 265 ADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGGGPDTALAAF Sbjct 181 ADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGGGPDTALAAF 240 Query 266 RDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDGTPGLSLLVFDPANGHTVNS 325 RDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDGTPGLSLLVFDPANGHTVNS Sbjct 241 RDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDGTPGLSLLVFDPANGHTVNS 300 Query 326 YPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 YPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP Sbjct 301 YPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 335 >gi|183981681|ref|YP_001849972.1| hypothetical protein MMAR_1667 [Mycobacterium marinum M] gi|183175007|gb|ACC40117.1| conserved membrane protein [Mycobacterium marinum M] Length=438 Score = 608 bits (1569), Expect = 3e-172, Method: Compositional matrix adjust. Identities = 297/360 (83%), Positives = 323/360 (90%), Gaps = 0/360 (0%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAAGPALS RGYLALN QTPAGCSLMEW+N++NGRQRWCVRLVQGGGFAGPLFDGFDNLY Sbjct 78 LAAGPALSGRGYLALNSQTPAGCSLMEWENNDNGRQRWCVRLVQGGGFAGPLFDGFDNLY 137 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGAI++FP TQWTRWRQPVIGMPSTPRFLG+G LLV+THLGQ+LVFD RG +VGSP Sbjct 138 VGQPGAIVAFPVTQWTRWRQPVIGMPSTPRFLGNGHLLVATHLGQMLVFDAHRGKIVGSP 197 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLV+G+DPTD RGLADCAPAR GCPVAAAPAFS VNG VVV VWQPG PAA LVGLKY Sbjct 198 MDLVEGVDPTDPARGLADCAPARQGCPVAAAPAFSKVNGMVVVGVWQPGAPAAGLVGLKY 257 Query 181 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 240 HA+QLVREWTSDAV GVLASPVLSADG TVYVNGRD RLWAL+A DGK KWS PLGFLA Sbjct 258 HAQQLVREWTSDAVKDGVLASPVLSADGETVYVNGRDQRLWALHATDGKVKWSVPLGFLA 317 Query 241 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS 300 QTPP +TP GLIVSGGGPDT LAAFRDAGDHA+ AWRRDDVT LST+SLA VGYT+++ Sbjct 318 QTPPTVTPEGLIVSGGGPDTRLAAFRDAGDHADQAWRRDDVTPLSTSSLAAGNVGYTIVA 377 Query 301 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 GP H+G PG+SLLVF+PA+GHT+NSY LP ATGYPVGVS+ D RVVTATSDGQVYSFAP Sbjct 378 GPPHEGGPGMSLLVFNPADGHTINSYSLPAATGYPVGVSIAVDGRVVTATSDGQVYSFAP 437 >gi|254552109|ref|ZP_05142556.1| hypothetical protein Mtube_16936 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=321 Score = 607 bits (1564), Expect = 1e-171, Method: Compositional matrix adjust. Identities = 302/304 (99%), Positives = 302/304 (99%), Gaps = 0/304 (0%) Query 26 MEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGAIISFPPTQWTRWRQPVIGM 85 MEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGAIISFPPTQWTRWRQPVIGM Sbjct 1 MEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGAIISFPPTQWTRWRQPVIGM 60 Query 86 PSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDGIDPTDATRGLADCAPARPG 145 PSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDGIDPTDATRGLADCAPARPG Sbjct 61 PSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDGIDPTDATRGLADCAPARPG 120 Query 146 CPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQLVREWTSDAVSAGVLASPVLS 205 CPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQLVREWTSDAVSAGVLASPVLS Sbjct 121 CPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQLVREWTSDAVSAGVLASPVLS 180 Query 206 ADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGGGPDTALAAF 265 ADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGGGPDTALAAF Sbjct 181 ADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGGGPDTALAAF 240 Query 266 RDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDGTPGLSLLVFDPANGHTVNS 325 RDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDGTPGLSLLVFDPANGHTVNS Sbjct 241 RDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDGTPGLSLLVFDPANGHTVNS 300 Query 326 YPLP 329 Y P Sbjct 301 YRYP 304 >gi|240169567|ref|ZP_04748226.1| hypothetical protein MkanA1_09657 [Mycobacterium kansasii ATCC 12478] Length=430 Score = 601 bits (1550), Expect = 5e-170, Method: Compositional matrix adjust. Identities = 295/360 (82%), Positives = 320/360 (89%), Gaps = 0/360 (0%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAAGPALSARGYLA+N QTPAGCSLMEW+N+NNGRQRWCVRLVQGGGFAGPL DGFDNLY Sbjct 70 LAAGPALSARGYLAINAQTPAGCSLMEWENNNNGRQRWCVRLVQGGGFAGPLLDGFDNLY 129 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGA+++FP TQWTRWRQPVIGMP+TPRF+GHG LLV+THLGQ+LVFDT RG VVGSP Sbjct 130 VGQPGAMVAFPVTQWTRWRQPVIGMPTTPRFVGHGHLLVATHLGQVLVFDTHRGRVVGSP 189 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 VDLVDG+DP D RGLADCAPAR GCPVA APAFS+VNGTVV+ VWQPG P A LVGLK Sbjct 190 VDLVDGVDPADPMRGLADCAPARMGCPVADAPAFSAVNGTVVLGVWQPGAPGAGLVGLKL 249 Query 181 HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 240 +QLVREW SDAV GVLASPVLSADG+TVYVNGRD +LWAL+AADGK KWS PLGFLA Sbjct 250 RDQQLVREWASDAVKDGVLASPVLSADGTTVYVNGRDQQLWALHAADGKVKWSVPLGFLA 309 Query 241 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS 300 QTPP +TP GLIVSGGGPD L AF DAGDHA+ AWRRDDV LST+SL G VGYTV++ Sbjct 310 QTPPTVTPDGLIVSGGGPDAQLVAFHDAGDHADQAWRRDDVMPLSTSSLGGGEVGYTVVA 369 Query 301 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 GP HDG PGLSLLVF+PANGHT+NSYPLP ATGYPVGVS+G DRRVVTATSDGQVYSFAP Sbjct 370 GPPHDGGPGLSLLVFNPANGHTINSYPLPAATGYPVGVSIGYDRRVVTATSDGQVYSFAP 429 >gi|118617503|ref|YP_905835.1| hypothetical protein MUL_1903 [Mycobacterium ulcerans Agy99] gi|118569613|gb|ABL04364.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=355 Score = 593 bits (1529), Expect = 1e-167, Method: Compositional matrix adjust. Identities = 288/354 (82%), Positives = 315/354 (89%), Gaps = 0/354 (0%) Query 7 LSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGA 66 +S RGYLALN QTPAGCSLMEW+N++NGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGA Sbjct 1 MSGRGYLALNSQTPAGCSLMEWENNDNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGA 60 Query 67 IISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDG 126 I++FP TQWTRWRQPVIGMPSTPRFLG+G LLV+THLGQ+LVFD RG +VGSP+DLV+G Sbjct 61 IVAFPVTQWTRWRQPVIGMPSTPRFLGNGHLLVATHLGQMLVFDAHRGKIVGSPMDLVEG 120 Query 127 IDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQLV 186 +DPTD RGLADCAPAR GCPVAAAPAFS VNG VVV +WQPG PAA LVGLKYHA+QLV Sbjct 121 VDPTDPARGLADCAPARQGCPVAAAPAFSKVNGMVVVGIWQPGAPAAGLVGLKYHAQQLV 180 Query 187 REWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPAL 246 REWTSDAV GVLASPVLSADG TVYVNGRD RLWAL+A DGK KWS PLGFLAQTPP + Sbjct 181 REWTSDAVKDGVLASPVLSADGETVYVNGRDQRLWALHATDGKVKWSVPLGFLAQTPPTV 240 Query 247 TPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDG 306 TP GLIVSGGGPDT LAAFRDAGDHA AWRRDDV LST+SLA VGYT+++GP H+G Sbjct 241 TPEGLIVSGGGPDTRLAAFRDAGDHAYQAWRRDDVAPLSTSSLAAGNVGYTIVAGPPHEG 300 Query 307 TPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 PG+SLLVF+PA+GHT+NSY LP ATGYPVGVS+ D RVVTATSDGQVYSFAP Sbjct 301 GPGMSLLVFNPADGHTINSYSLPAATGYPVGVSIAVDGRVVTATSDGQVYSFAP 354 >gi|254776320|ref|ZP_05217836.1| hypothetical protein MaviaA2_16862 [Mycobacterium avium subsp. avium ATCC 25291] Length=423 Score = 586 bits (1510), Expect = 2e-165, Method: Compositional matrix adjust. Identities = 291/363 (81%), Positives = 318/363 (88%), Gaps = 5/363 (1%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAAGPALSARGYL LN QTPAGCSLMEW+N++NGRQRWCVRLVQGGGFAGPL DGFDNLY Sbjct 62 LAAGPALSARGYLGLNAQTPAGCSLMEWENNDNGRQRWCVRLVQGGGFAGPLLDGFDNLY 121 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGA +SFP TQWTRWRQPVIGMP+TPRFLGHG+LLV THLGQ+LVFD+ RG V GSP Sbjct 122 VGQPGAFLSFPVTQWTRWRQPVIGMPTTPRFLGHGQLLVVTHLGQVLVFDSHRGQVAGSP 181 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLVDG+DPTDATRGLADCAPARP CPV AAPAFS+ G VV+ VWQPG P+A LVGLKY Sbjct 182 LDLVDGVDPTDATRGLADCAPARPDCPVPAAPAFSAATGMVVLGVWQPGAPSAGLVGLKY 241 Query 181 HAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 H Q L REWTSDAV AGV+ASPVLSADGSTVYVNGRD RLWAL AAD K KWSAPLG Sbjct 242 HPGQSPLLTREWTSDAVGAGVIASPVLSADGSTVYVNGRDQRLWALRAADAKVKWSAPLG 301 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 FLAQTPPA+TP GLIV+GGGPDT LAAFRDAGDHA+ WRRDD+ LS++SLA GVGYT Sbjct 302 FLAQTPPAVTPQGLIVAGGGPDTRLAAFRDAGDHADQVWRRDDLIPLSSSSLA--GVGYT 359 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V+SGP +G PG+S+LVFDP +GHT+NSYPLP ATGYP+GVSVG DRRVV A SDGQVY Sbjct 360 VVSGPPANGAPGMSVLVFDPGDGHTLNSYPLPAATGYPLGVSVGTDRRVVAAISDGQVYG 419 Query 358 FAP 360 FAP Sbjct 420 FAP 422 >gi|118462460|ref|YP_883061.1| hypothetical protein MAV_3899 [Mycobacterium avium 104] gi|118163747|gb|ABK64644.1| conserved hypothetical protein [Mycobacterium avium 104] Length=423 Score = 586 bits (1510), Expect = 2e-165, Method: Compositional matrix adjust. Identities = 291/363 (81%), Positives = 317/363 (88%), Gaps = 5/363 (1%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAAGPALSARGYL LN QTPAGCSLMEW+N +NGRQRWCVRLVQGGGFAGPL DGFDNLY Sbjct 62 LAAGPALSARGYLGLNAQTPAGCSLMEWENTDNGRQRWCVRLVQGGGFAGPLLDGFDNLY 121 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGA +SFP TQWTRWRQPVIGMP+TPRFLGHG+LLV THLGQ+LVFD+ RG V GSP Sbjct 122 VGQPGAFLSFPVTQWTRWRQPVIGMPTTPRFLGHGQLLVVTHLGQVLVFDSHRGQVAGSP 181 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLVDG+DPTDATRGLADCAPARP CPV AAPAFS+ G VV+ VWQPG P+A LVGLKY Sbjct 182 LDLVDGVDPTDATRGLADCAPARPDCPVPAAPAFSAATGMVVLGVWQPGAPSAGLVGLKY 241 Query 181 HAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 H Q L REWTSDAV AGV+ASPVLSADGSTVYVNGRD RLWAL AAD K KWSAPLG Sbjct 242 HPGQSPLLTREWTSDAVGAGVIASPVLSADGSTVYVNGRDQRLWALRAADAKVKWSAPLG 301 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 FLAQTPPA+TP GLIV+GGGPDT LAAFRDAGDHA+ WRRDD+ LS++SLA GVGYT Sbjct 302 FLAQTPPAVTPQGLIVAGGGPDTRLAAFRDAGDHADQVWRRDDLIPLSSSSLA--GVGYT 359 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V+SGP +G PG+S+LVFDP +GHT+NSYPLP ATGYP+GVSVG DRRVV A SDGQVY Sbjct 360 VVSGPPANGAPGMSVLVFDPGDGHTLNSYPLPAATGYPLGVSVGTDRRVVAAISDGQVYG 419 Query 358 FAP 360 FAP Sbjct 420 FAP 422 >gi|336459273|gb|EGO38218.1| WD40-like repeat-containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=423 Score = 585 bits (1508), Expect = 3e-165, Method: Compositional matrix adjust. Identities = 291/363 (81%), Positives = 317/363 (88%), Gaps = 5/363 (1%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAAGPALSARGYL LN QTPAGCSLMEW+N +NGRQRWCVRLVQGGGFAGPL DGFDNLY Sbjct 62 LAAGPALSARGYLGLNAQTPAGCSLMEWENTDNGRQRWCVRLVQGGGFAGPLLDGFDNLY 121 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGA +SFP TQWTRWRQPVIGMP+TPRFLGHG+LLV THLGQ+LVFD+ RG V GSP Sbjct 122 VGQPGAFLSFPVTQWTRWRQPVIGMPTTPRFLGHGQLLVVTHLGQVLVFDSHRGQVAGSP 181 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLVDG+DPTDATRGLADCAPARP CPV AAPAFS+ G VV+ VWQPG P+A LVGLKY Sbjct 182 LDLVDGVDPTDATRGLADCAPARPDCPVPAAPAFSAATGMVVLGVWQPGAPSAGLVGLKY 241 Query 181 HAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 H Q L REWTSDAV AGV+ASPVLSADGSTVYVNGRD RLWAL AAD K KWSAPLG Sbjct 242 HPGQSPLLTREWTSDAVGAGVIASPVLSADGSTVYVNGRDQRLWALRAADAKVKWSAPLG 301 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 FLAQTPPA+TP GLIV+GGGPDT LAAFRDAGDHA+ WRRDD+ LS++SLA GVGYT Sbjct 302 FLAQTPPAVTPQGLIVAGGGPDTRLAAFRDAGDHADQVWRRDDLIPLSSSSLA--GVGYT 359 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V+SGP +G PG+S+LVFDP +GHT+NSYPLP ATGYP+GVSVG DRRVV A SDGQVY Sbjct 360 VVSGPPANGAPGMSVLVFDPGDGHTLNSYPLPAATGYPLGVSVGTDRRVVAAISDGQVYG 419 Query 358 FAP 360 FAP Sbjct 420 FAP 422 >gi|41409181|ref|NP_962017.1| hypothetical protein MAP3083 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398001|gb|AAS05631.1| hypothetical protein MAP_3083 [Mycobacterium avium subsp. paratuberculosis K-10] Length=372 Score = 584 bits (1505), Expect = 8e-165, Method: Compositional matrix adjust. Identities = 291/363 (81%), Positives = 317/363 (88%), Gaps = 5/363 (1%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAAGPALSARGYL LN QTPAGCSLMEW+N +NGRQRWCVRLVQGGGFAGPL DGFDNLY Sbjct 11 LAAGPALSARGYLGLNAQTPAGCSLMEWENTDNGRQRWCVRLVQGGGFAGPLLDGFDNLY 70 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGA +SFP TQWTRWRQPVIGMP+TPRFLGHG+LLV THLGQ+LVFD+ RG V GSP Sbjct 71 VGQPGAFLSFPVTQWTRWRQPVIGMPTTPRFLGHGQLLVVTHLGQVLVFDSHRGQVAGSP 130 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLVDG+DPTDATRGLADCAPARP CPV AAPAFS+ G VV+ VWQPG P+A LVGLKY Sbjct 131 LDLVDGVDPTDATRGLADCAPARPDCPVPAAPAFSAATGMVVLGVWQPGAPSAGLVGLKY 190 Query 181 HAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 H Q L REWTSDAV AGV+ASPVLSADGSTVYVNGRD RLWAL AAD K KWSAPLG Sbjct 191 HPGQSPLLTREWTSDAVGAGVIASPVLSADGSTVYVNGRDQRLWALRAADAKVKWSAPLG 250 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 FLAQTPPA+TP GLIV+GGGPDT LAAFRDAGDHA+ WRRDD+ LS++SLA GVGYT Sbjct 251 FLAQTPPAVTPQGLIVAGGGPDTRLAAFRDAGDHADQVWRRDDLIPLSSSSLA--GVGYT 308 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V+SGP +G PG+S+LVFDP +GHT+NSYPLP ATGYP+GVSVG DRRVV A SDGQVY Sbjct 309 VVSGPPANGAPGMSVLVFDPGDGHTLNSYPLPAATGYPLGVSVGTDRRVVAAISDGQVYG 368 Query 358 FAP 360 FAP Sbjct 369 FAP 371 >gi|296171172|ref|ZP_06852620.1| Pyrrolo-quinoline quinone [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894308|gb|EFG74063.1| Pyrrolo-quinoline quinone [Mycobacterium parascrofulaceum ATCC BAA-614] Length=452 Score = 570 bits (1469), Expect = 1e-160, Method: Compositional matrix adjust. Identities = 288/363 (80%), Positives = 319/363 (88%), Gaps = 3/363 (0%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAAGPA+SARGYL LN QTPAGCSLMEW+ND+NGRQRWCVRLVQGGGFAGPL DGFDN+Y Sbjct 89 LAAGPAMSARGYLVLNAQTPAGCSLMEWENDDNGRQRWCVRLVQGGGFAGPLLDGFDNVY 148 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGA +SFP TQWTRWR+PVIGMP+TPRFLGHG+LLV+THLGQ+LVF++ RG VVGSP Sbjct 149 VGQPGAFVSFPVTQWTRWRRPVIGMPATPRFLGHGQLLVATHLGQVLVFESHRGAVVGSP 208 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLV+G+DPTDATRGLADCAPAR GCPVAAAPAFS+ + V+ VWQPG PAA LVGLKY Sbjct 209 LDLVEGVDPTDATRGLADCAPARQGCPVAAAPAFSAASQMAVLGVWQPGAPAAGLVGLKY 268 Query 181 HAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 H Q L +EWTSDA+ AGV+ASPVLSADGSTVYVNGRD RLWAL+AADGK KWSAPLG Sbjct 269 HPGQTPLLSKEWTSDAIQAGVIASPVLSADGSTVYVNGRDQRLWALHAADGKVKWSAPLG 328 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 FLAQTPPA+TP GLIVSGGGPDT L AF+DAGDHA+ AWRRDDV LS++SLAG GVGYT Sbjct 329 FLAQTPPAVTPAGLIVSGGGPDTRLVAFKDAGDHADQAWRRDDVAPLSSSSLAGAGVGYT 388 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 ++S +G PG+SLLVFDP GHT SYPLP ATGYPVGVSVG DRRVV ATSDGQVY Sbjct 389 IVSTTAANGAPGMSLLVFDPGTGHTQGSYPLPAATGYPVGVSVGADRRVVAATSDGQVYG 448 Query 358 FAP 360 FAP Sbjct 449 FAP 451 >gi|15827922|ref|NP_302185.1| hypothetical protein ML1720 [Mycobacterium leprae TN] gi|221230399|ref|YP_002503815.1| hypothetical protein MLBr_01720 [Mycobacterium leprae Br4923] gi|13093475|emb|CAC30673.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933506|emb|CAR71815.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=364 Score = 568 bits (1463), Expect = 7e-160, Method: Compositional matrix adjust. Identities = 275/363 (76%), Positives = 312/363 (86%), Gaps = 3/363 (0%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 +AAGPALSARGYLA+N QT AGCSLMEW+N++NGRQRWCVRLVQGGGF GPLFDGF+NLY Sbjct 1 MAAGPALSARGYLAMNAQTQAGCSLMEWENNDNGRQRWCVRLVQGGGFGGPLFDGFENLY 60 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VG+PG I SFP TQWTRWRQPVIGMPSTPRFLG+G+LLV+THLGQ+LVFD RGMVVGSP Sbjct 61 VGEPGTIFSFPMTQWTRWRQPVIGMPSTPRFLGNGQLLVTTHLGQVLVFDAHRGMVVGSP 120 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLVDG++PTD TRGLADC A+ GCPVA+APA+S + TVV+ +WQPG P A L+GLKY Sbjct 121 LDLVDGVNPTDPTRGLADCVSAQRGCPVASAPAYSPASQTVVLDIWQPGAPTAGLIGLKY 180 Query 181 HAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 H+ Q L R WTSDA+ AGVLASPVLSADGSTVYVNGRD LWAL+AA+GK KWS PL Sbjct 181 HSRQTPLLARAWTSDAIGAGVLASPVLSADGSTVYVNGRDQHLWALHAANGKPKWSVPLE 240 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 FLAQTPP +TP GLIVSGGGPDT LAAF+DAGDHA+ WRRDD+T LST+SLAG VGYT Sbjct 241 FLAQTPPTVTPQGLIVSGGGPDTRLAAFKDAGDHAQQIWRRDDLTPLSTSSLAGVSVGYT 300 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V+S PG+SLL FDP NGHT+NSYPLP ATGYPVGVS+ N+RRV+T TSDGQ+YS Sbjct 301 VVSSSPAADAPGMSLLAFDPRNGHTLNSYPLPAATGYPVGVSIANNRRVITVTSDGQLYS 360 Query 358 FAP 360 FAP Sbjct 361 FAP 363 >gi|254821489|ref|ZP_05226490.1| hypothetical protein MintA_16265 [Mycobacterium intracellulare ATCC 13950] Length=458 Score = 567 bits (1462), Expect = 9e-160, Method: Compositional matrix adjust. Identities = 286/363 (79%), Positives = 312/363 (86%), Gaps = 3/363 (0%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAAGPALSARGYLALN QT AGCSLMEW+N++NGRQRWCVRL QGGGF GPL DGFDNLY Sbjct 95 LAAGPALSARGYLALNAQTSAGCSLMEWENNHNGRQRWCVRLFQGGGFGGPLLDGFDNLY 154 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGA +SFP TQWTRWRQPVIGMP+TPRFLG G LLV+THLGQ+LVFD+ RG VV SP Sbjct 155 VGQPGAFLSFPVTQWTRWRQPVIGMPTTPRFLGSGELLVATHLGQVLVFDSHRGQVVSSP 214 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLVDGIDPTDATRGLADCAPAR GCPVAAAPAFS+ NG V+ VWQPG PAA LVGLKY Sbjct 215 LDLVDGIDPTDATRGLADCAPARQGCPVAAAPAFSAANGMAVLGVWQPGAPAAVLVGLKY 274 Query 181 HAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 H Q L +EWTSDAV AG +ASPVLSADGSTVYVNGRD RLWAL AD K KWSAPLG Sbjct 275 HPGQTPLLTKEWTSDAVGAGAIASPVLSADGSTVYVNGRDERLWALRTADAKVKWSAPLG 334 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 FLAQTPPA+TP GLIVSGGGPDT L AF+D GDHA+ WRRDD LS++SLAG GVGYT Sbjct 335 FLAQTPPAITPQGLIVSGGGPDTRLVAFKDTGDHADQVWRRDDAVPLSSSSLAGAGVGYT 394 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V+ GP +G PG+S+LVFDP +GHT+NSYPLP ATGYP+GV+VG DRRVV ATSDGQVY Sbjct 395 VVGGPPANGAPGMSVLVFDPGDGHTLNSYPLPAATGYPLGVAVGTDRRVVAATSDGQVYG 454 Query 358 FAP 360 FAP Sbjct 455 FAP 457 >gi|342858122|ref|ZP_08714777.1| hypothetical protein MCOL_04591 [Mycobacterium colombiense CECT 3035] gi|342133826|gb|EGT87006.1| hypothetical protein MCOL_04591 [Mycobacterium colombiense CECT 3035] Length=424 Score = 565 bits (1457), Expect = 3e-159, Method: Compositional matrix adjust. Identities = 287/363 (80%), Positives = 313/363 (87%), Gaps = 3/363 (0%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAAGPALSARGYLALN QT AGCSLMEW+N++NGRQRWCVRL QGGGF GPL DGFDNLY Sbjct 61 LAAGPALSARGYLALNAQTSAGCSLMEWENNDNGRQRWCVRLAQGGGFGGPLLDGFDNLY 120 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGA++SFP TQWTRWRQPVIGMP+TPRF+G G LLV+THLGQ+LVFD+ RG V GSP Sbjct 121 VGQPGALLSFPVTQWTRWRQPVIGMPTTPRFVGPGALLVATHLGQVLVFDSHRGQVAGSP 180 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLVDG+DPTDA RGL DC PAR GCPVAAAPAFS+ NG VV+ VWQPG PAA LVGLKY Sbjct 181 LDLVDGVDPTDAARGLPDCVPARQGCPVAAAPAFSAANGMVVLGVWQPGAPAAGLVGLKY 240 Query 181 HAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 H Q L REWTSDAV AGV+ASPVLSADGSTVYVNGRD RLWAL AAD K KWS PLG Sbjct 241 HPGQTPLLTREWTSDAVGAGVIASPVLSADGSTVYVNGRDQRLWALRAADAKVKWSVPLG 300 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 FLAQTPPA+TP GLIV+GGGPDT LAAF+DAGDHA+ WRRDDV LST+SLAG GVGYT Sbjct 301 FLAQTPPAVTPQGLIVAGGGPDTKLAAFKDAGDHADQVWRRDDVLPLSTSSLAGDGVGYT 360 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V SGP +G PG+SLL+FDP +G T+ SYP+P ATGYPVGVSVG DRRVV ATSDGQVY Sbjct 361 VASGPPANGAPGMSLLIFDPGSGRTLGSYPMPAATGYPVGVSVGTDRRVVAATSDGQVYG 420 Query 358 FAP 360 FAP Sbjct 421 FAP 423 >gi|167970234|ref|ZP_02552511.1| hypothetical protein MtubH3_20298 [Mycobacterium tuberculosis H37Ra] Length=262 Score = 513 bits (1322), Expect = 2e-143, Method: Compositional matrix adjust. Identities = 261/262 (99%), Positives = 262/262 (100%), Gaps = 0/262 (0%) Query 99 VSTHLGQLLVFDTRRGMVVGSPVDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVN 158 +STHLGQLLVFDTRRGMVVGSPVDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVN Sbjct 1 MSTHLGQLLVFDTRRGMVVGSPVDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVN 60 Query 159 GTVVVSVWQPGEPAAKLVGLKYHAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDH 218 GTVVVSVWQPGEPAAKLVGLKYHAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDH Sbjct 61 GTVVVSVWQPGEPAAKLVGLKYHAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDH 120 Query 219 RLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRR 278 RLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRR Sbjct 121 RLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRR 180 Query 279 DDVTALSTASLAGTGVGYTVISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGV 338 DDVTALSTASLAGTGVGYTVISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGV Sbjct 181 DDVTALSTASLAGTGVGYTVISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGV 240 Query 339 SVGNDRRVVTATSDGQVYSFAP 360 SVGNDRRVVTATSDGQVYSFAP Sbjct 241 SVGNDRRVVTATSDGQVYSFAP 262 >gi|333991399|ref|YP_004524013.1| hypothetical protein JDM601_2759 [Mycobacterium sp. JDM601] gi|333487367|gb|AEF36759.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=424 Score = 495 bits (1275), Expect = 5e-138, Method: Compositional matrix adjust. Identities = 258/363 (72%), Positives = 296/363 (82%), Gaps = 5/363 (1%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 L AGPA+ A G+L LN QT GCSLM+W+N +GRQRWC RL QGGGF GPL DGFDN+Y Sbjct 63 LGAGPAVGAHGWLVLNAQTEDGCSLMQWENAEHGRQRWCTRLHQGGGFFGPLIDGFDNVY 122 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGA++SFPPTQW RWR PVIGMPSTPR LG G LLV THLGQ+LVFD RG VVG+P Sbjct 123 VGQPGAMLSFPPTQWIRWRAPVIGMPSTPRILGDGLLLVVTHLGQVLVFDAHRGAVVGTP 182 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLVDG+DPTD RGL+DC ARP CPVAAAPAFS+ + TVVVS+WQPG + LVG+KY Sbjct 183 LDLVDGVDPTDFRRGLSDCDAARPDCPVAAAPAFSAASNTVVVSLWQPGADESGLVGIKY 242 Query 181 H---AEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 H L +EWTSDAV+AGVLASPVLSADG+T Y+NGRD RLWA+NAADGKAKWS PL Sbjct 243 HPGGTPLLTQEWTSDAVAAGVLASPVLSADGATAYINGRDQRLWAINAADGKAKWSVPLK 302 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 FLAQTPPA+TP GLIV+GGGP+T L AF D GD+AE WRRDDVT LS++SLAG VGYT Sbjct 303 FLAQTPPAVTPGGLIVAGGGPETELVAFADRGDYAEQVWRRDDVTPLSSSSLAGK-VGYT 361 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V +G + G GLSLLVFDP +GH+VNSYPLP + G+P+GVSVG D+RVV TS GQV+S Sbjct 362 VAAGTSV-GPAGLSLLVFDPDDGHSVNSYPLPESRGFPLGVSVGRDQRVVVTTSAGQVFS 420 Query 358 FAP 360 FAP Sbjct 421 FAP 423 >gi|118468753|ref|YP_886680.1| hypothetical protein MSMEG_2333 [Mycobacterium smegmatis str. MC2 155] gi|118472970|ref|YP_885451.1| hypothetical protein MSMEG_1053 [Mycobacterium smegmatis str. MC2 155] gi|118170040|gb|ABK70936.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] gi|118174257|gb|ABK75153.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=427 Score = 461 bits (1185), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 233/358 (66%), Positives = 273/358 (77%), Gaps = 8/358 (2%) Query 6 ALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPG 65 AL + GYLA+N Q+ GCSLM W+ DNNGRQRWC RLVQGGG++GPLFDGFDN+YVGQPG Sbjct 74 ALGSAGYLAVNAQSAGGCSLMVWEADNNGRQRWCTRLVQGGGWSGPLFDGFDNVYVGQPG 133 Query 66 AIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVD 125 A++SFPPTQW RWR+PVIGMP+TPR L G+LLV THLGQ+LVFD+ RG V G+P+DLV Sbjct 134 AMLSFPPTQWIRWRKPVIGMPTTPRLLADGQLLVVTHLGQVLVFDSHRGTVEGTPLDLVS 193 Query 126 GIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQ- 184 G+DPTD+ RGLADC AR CPVAAAPAFS VV+S+WQPG A LVGL Y Q Sbjct 194 GVDPTDSERGLADCPLARSRCPVAAAPAFSGQTNIVVLSLWQPGAEAPVLVGLNYRPGQK 253 Query 185 --LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQT 242 L + WTSDA G LASPVLSADG TVYV+GRD +LWALN+ADG KWS PL +LAQT Sbjct 254 PLLTQAWTSDAAGRGPLASPVLSADGQTVYVSGRDEQLWALNSADGTVKWSVPLDYLAQT 313 Query 243 PPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGP 302 PP++ P GLIV+GGGPD L A RD GD E W RDDV L+T+S +G VGY V Sbjct 314 PPSVAPDGLIVAGGGPDAKLTAVRDEGDRGEIVWTRDDVAPLTTSSRSGN-VGYAVARQG 372 Query 303 NHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 H G +LLVFD +G T+ ++PLP ATG+PVGVS+G+D RVVTATSDGQVY F+P Sbjct 373 GH----GQALLVFDTGDGRTLQTHPLPEATGWPVGVSIGHDGRVVTATSDGQVYGFSP 426 >gi|315445175|ref|YP_004078054.1| WD40-like repeat protein [Mycobacterium sp. Spyr1] gi|315263478|gb|ADU00220.1| WD40-like repeat protein [Mycobacterium sp. Spyr1] Length=429 Score = 454 bits (1168), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 227/363 (63%), Positives = 271/363 (75%), Gaps = 6/363 (1%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAA AL + YLA+N QT GCSLM W+ DN RQRWC RLVQGGG A PLFDGFDNLY Sbjct 69 LAAQAALGSGNYLAVNAQTEGGCSLMVWEVDNRARQRWCTRLVQGGGIASPLFDGFDNLY 128 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 +GQPG + SFP TQW RWR+PVIG+P T R + GR+L THLGQ+LVFD RG V G+ Sbjct 129 IGQPGLLQSFPTTQWVRWRKPVIGLPLTARLVAPGRVLAVTHLGQVLVFDAHRGTVTGNS 188 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLV G+DP D+ RGLADC ARP CP+AAAPA+S NG VV+++W+PG LVGL+Y Sbjct 189 LDLVAGLDPRDSERGLADCRQARPECPIAAAPAYSESNGMVVLTLWEPGADKPVLVGLRY 248 Query 181 ---HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 QL REWTSDAV G LASPVLS DG+TVYVNGRD RLWA+N ADG AKWS PL Sbjct 249 QQGQTPQLTREWTSDAVGGGPLASPVLSHDGATVYVNGRDERLWAINTADGSAKWSVPLS 308 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 +LAQTPP++TP GL+++GGGP + L A RD D E W RDDV L+T+SLA G+GY Sbjct 309 YLAQTPPSVTPDGLVIAGGGPGSRLVAIRDTADDGEELWTRDDVAPLTTSSLA--GLGYA 366 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V+ + D + GL+L +F +G TVN+YPLP A+G+PVGVS+G+D RVVTATSDGQVY Sbjct 367 VVRDGDGD-SAGLALTIFTLGDGSTVNTYPLPNASGWPVGVSIGHDGRVVTATSDGQVYG 425 Query 358 FAP 360 FAP Sbjct 426 FAP 428 >gi|120403086|ref|YP_952915.1| Pyrrolo-quinoline quinone [Mycobacterium vanbaalenii PYR-1] gi|119955904|gb|ABM12909.1| Pyrrolo-quinoline quinone [Mycobacterium vanbaalenii PYR-1] Length=429 Score = 452 bits (1163), Expect = 4e-125, Method: Compositional matrix adjust. Identities = 231/363 (64%), Positives = 271/363 (75%), Gaps = 6/363 (1%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAA AL + YLA+NGQT AGCSLM W+ DN RQRWC RLVQGGG + PLFD FDNLY Sbjct 69 LAAQVALGSGNYLAVNGQTGAGCSLMVWETDNRARQRWCTRLVQGGGLSSPLFDDFDNLY 128 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 +GQPGA++SFPPTQW RWR+PVIGMP T R L G LLV THLGQ+LVFD RG V G+ Sbjct 129 IGQPGAVLSFPPTQWIRWRRPVIGMPMTARILTPGNLLVVTHLGQVLVFDAHRGTVTGTS 188 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLVDG+DPTD+ RGL DC A P CPVA+APA+S+ G VV+++W+P LVGL+Y Sbjct 189 LDLVDGVDPTDSERGLDDCRLAGPRCPVASAPAYSAATGMVVLTLWEPNADKPVLVGLRY 248 Query 181 ---HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 QL REWTSDAV G LASPVLSADGSTVYVNGRD LWA+N DG KWS PL Sbjct 249 RPGQTPQLTREWTSDAVGGGPLASPVLSADGSTVYVNGRDESLWAINVDDGSEKWSVPLQ 308 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 +LAQTPP++TP GL+++GGGP + L A RD E W RDD + L+T+SLA GVGY Sbjct 309 YLAQTPPSVTPGGLVIAGGGPGSRLTAVRDTASEGEVLWTRDDTSPLTTSSLA--GVGYA 366 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V+ + DG G +L VF+ +G TVN+YPLP ATG+PVGVSVG+D RVVTATSDGQVY Sbjct 367 VVPDDSGDGA-GFALTVFNLGDGGTVNTYPLPRATGWPVGVSVGHDGRVVTATSDGQVYG 425 Query 358 FAP 360 FAP Sbjct 426 FAP 428 >gi|145224844|ref|YP_001135522.1| Pyrrolo-quinoline quinone [Mycobacterium gilvum PYR-GCK] gi|145217330|gb|ABP46734.1| Pyrrolo-quinoline quinone [Mycobacterium gilvum PYR-GCK] Length=429 Score = 450 bits (1157), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 225/363 (62%), Positives = 271/363 (75%), Gaps = 6/363 (1%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 LAA AL + YLA+N QT GCSLM W+ DN RQRWC RLVQGGG A PLFDGFDNLY Sbjct 69 LAAQAALGSGNYLAVNAQTEGGCSLMVWEVDNRARQRWCTRLVQGGGIASPLFDGFDNLY 128 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 +GQPG + SFP TQW RWR+PVIG+P T R + GR+L THLGQ+LVFD RG V G+ Sbjct 129 IGQPGLLQSFPTTQWVRWRKPVIGLPLTARLVAPGRVLAVTHLGQVLVFDAHRGTVTGNS 188 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLV G+DP D+ RGLADC ARP CP+AAAPA+S NG VV+++W+PG LVGL+Y Sbjct 189 LDLVAGLDPRDSERGLADCRQARPECPIAAAPAYSDSNGMVVLTLWEPGADKPVLVGLRY 248 Query 181 ---HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 QL REWTSDAV G LASPVLS DG+TVYVNGRD RLWA+N ADG KWS PLG Sbjct 249 QQGQTPQLTREWTSDAVGGGPLASPVLSHDGATVYVNGRDERLWAINTADGSEKWSVPLG 308 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 +LAQTPP++TP GL+++GGGP + L A RD D E W R++V L+T+SLA G+GY Sbjct 309 YLAQTPPSVTPDGLVIAGGGPGSRLVAIRDTADDGEELWTREEVAPLTTSSLA--GLGYA 366 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V+ + + + GL+L VF +G TVN+YPLP A+G+PVGVS+G+D RVVTATSDGQVY Sbjct 367 VVRDGDGE-SAGLALRVFTLGDGTTVNTYPLPNASGWPVGVSIGHDGRVVTATSDGQVYG 425 Query 358 FAP 360 FAP Sbjct 426 FAP 428 >gi|126434432|ref|YP_001070123.1| Pyrrolo-quinoline quinone [Mycobacterium sp. JLS] gi|126234232|gb|ABN97632.1| Pyrrolo-quinoline quinone [Mycobacterium sp. JLS] Length=427 Score = 440 bits (1132), Expect = 1e-121, Method: Compositional matrix adjust. Identities = 232/363 (64%), Positives = 272/363 (75%), Gaps = 8/363 (2%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 L A AL GYLA N Q+PAGCSLM W+ DN+ RQRWC RLVQGGG A PL DGFDNLY Sbjct 69 LGAAVALGTGGYLAANAQSPAGCSLMVWEADNDARQRWCSRLVQGGGGASPLLDGFDNLY 128 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGAI++FP TQW RWR+PVIG P+TPR + G+LLV THLGQ+LVFD RG V G+P Sbjct 129 VGQPGAILAFPRTQWIRWRKPVIGAPTTPRIMAPGQLLVITHLGQVLVFDAHRGTVEGTP 188 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLV G+DP ++ RGLADC +RP CPVAAAPAFS+ VV+S+W+PG LVGL+Y Sbjct 189 IDLVSGVDPRNSERGLADCRLSRPECPVAAAPAFSAAGAIVVLSLWEPGADKPVLVGLRY 248 Query 181 HAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 Q L REWTSDAV G LASPV+SADGSTVYVNGRD RLWAL+ ADG AKWS PL Sbjct 249 RPGQTPLLAREWTSDAVEKGPLASPVISADGSTVYVNGRDERLWALDTADGAAKWSVPLD 308 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 +L QTPP+++P G I++GGGP L A RD+GD E W R+DV L+T+S AG +GY Sbjct 309 YLPQTPPSVSPDGSIIAGGGPGAKLTAIRDSGDRGEVVWTREDVVPLTTSSRAGR-LGYA 367 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V+ P+ G L VFD A+G TVNSYPLP ATG+PVGVS+G+D RVV ATSDGQVY Sbjct 368 VVEAPDG----GQDLTVFDTADGRTVNSYPLPEATGWPVGVSLGHDGRVVAATSDGQVYG 423 Query 358 FAP 360 FAP Sbjct 424 FAP 426 >gi|108798831|ref|YP_639028.1| hypothetical protein Mmcs_1863 [Mycobacterium sp. MCS] gi|119867948|ref|YP_937900.1| Pyrrolo-quinoline quinone [Mycobacterium sp. KMS] gi|108769250|gb|ABG07972.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119694037|gb|ABL91110.1| Pyrrolo-quinoline quinone [Mycobacterium sp. KMS] Length=427 Score = 435 bits (1119), Expect = 6e-120, Method: Compositional matrix adjust. Identities = 231/363 (64%), Positives = 272/363 (75%), Gaps = 8/363 (2%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 L A AL GYLA N Q+PAGCSLM W+ +N+ RQRWC RLVQGGG A PL DGFDNLY Sbjct 69 LGAAVALGTGGYLAANAQSPAGCSLMVWEAENDARQRWCSRLVQGGGGASPLLDGFDNLY 128 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VGQPGAI++FP TQW RWR+PVIG P+TPR + G+LLV THLGQ+LVFD RG V G+P Sbjct 129 VGQPGAILAFPRTQWIRWRKPVIGAPTTPRIMAPGQLLVITHLGQVLVFDAHRGTVEGTP 188 Query 121 VDLVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY 180 +DLV G+DP ++ RGLADC +RP CPVAAAPAFS+ VV+S+W+PG LVGL+Y Sbjct 189 IDLVSGVDPRNSERGLADCRLSRPECPVAAAPAFSAAGAIVVLSLWEPGADKPVLVGLRY 248 Query 181 HAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLG 237 Q L REWTSDAV G LASPV+SADGSTVYVNGRD RLWAL+ ADG AKWS PL Sbjct 249 RPGQTPLLAREWTSDAVEKGPLASPVISADGSTVYVNGRDERLWALDTADGAAKWSVPLD 308 Query 238 FLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYT 297 +L QTPP+++P G I++GGGP L A RD+GD E W R+DV L+T+S AG +GY Sbjct 309 YLPQTPPSVSPDGSIIAGGGPGAKLTAIRDSGDRGEVVWTREDVVPLTTSSRAGR-LGYA 367 Query 298 VISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYS 357 V+ P DG L+ VFD A+G TVNSYPLP ATG+PVGVS+G+D VV ATSDGQVY Sbjct 368 VVEAP--DGAQDLT--VFDTADGRTVNSYPLPEATGWPVGVSLGHDGSVVAATSDGQVYG 423 Query 358 FAP 360 FAP Sbjct 424 FAP 426 >gi|169630460|ref|YP_001704109.1| hypothetical protein MAB_3379 [Mycobacterium abscessus ATCC 19977] gi|169242427|emb|CAM63455.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=430 Score = 399 bits (1024), Expect = 5e-109, Method: Compositional matrix adjust. Identities = 183/358 (52%), Positives = 252/358 (71%), Gaps = 7/358 (1%) Query 6 ALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPG 65 A+ ++A++ TP+GC+LMEW+++ RQRWC R++ G ++GPL DG++NLYVGQPG Sbjct 75 AIGIDNFIAVSADTPSGCTLMEWEDNRAARQRWCTRMITGSPWSGPLADGYNNLYVGQPG 134 Query 66 AIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVD 125 A++SFPPTQW RWR+PVIG P+TP+ + GRLL+ THLGQ+L+FD +RG VVG+P+DL++ Sbjct 135 AVVSFPPTQWIRWRKPVIGAPTTPKIVEPGRLLIVTHLGQILIFDAQRGEVVGTPMDLLE 194 Query 126 GIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAE-- 183 G+DP D RGL DC PARP CP++A+PA+ GT+V ++WQP +P L+G+ Y A+ Sbjct 195 GVDPADPRRGLEDCEPARPKCPISASPAYDPATGTIVTTLWQPDKPVPVLLGITYDADGK 254 Query 184 -QLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQT 242 L +W S + GV+ SPV+S DG TVY+N R L A++ DG KWS PLGF A T Sbjct 255 VTLKHKWASKIIDEGVIGSPVMSNDGETVYINDRKGSLHAMHTFDGSQKWSLPLGFNATT 314 Query 243 PPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGP 302 PP++ P G I++G G L +D+G E AWRRDD+ LST+S A VGY V+ Sbjct 315 PPSVAPDGTIIAGTGDKATLVGIKDSGAKGEIAWRRDDLVPLSTSSQAAGNVGYAVV--- 371 Query 303 NHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 DG GL+L+VF+ +G T+N YPLP ATG+PVG+S+G D+RV+ S+G VY F P Sbjct 372 -RDGDKGLALVVFNTPDGATINRYPLPDATGFPVGISIGPDQRVIVTLSEGLVYGFRP 428 >gi|111023417|ref|YP_706389.1| hypothetical protein RHA1_ro06456 [Rhodococcus jostii RHA1] gi|110822947|gb|ABG98231.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=435 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 145/362 (41%), Positives = 201/362 (56%), Gaps = 16/362 (4%) Query 6 ALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPG 65 +++A G + + +T GC+L +Q D+ GR+RWC +L G + P+ DG N+YVG+ G Sbjct 76 SVAASGQIFITARTEKGCNLFSYQMDS-GRKRWCRQLAPGVVASTPIVDGAANVYVGENG 134 Query 66 AIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLV- 124 AI SF RWR PV+G P + +F G G LL T LGQ+ V DT+ G V +P DLV Sbjct 135 AINSFNEYGQLRWRTPVVGTPLSAQFTGDGNLLFITQLGQINVVDTQTGQKVVAPYDLVP 194 Query 125 -------DGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVG 177 +D +GL+ C P CPVA PA +G + + PG PAA+LV Sbjct 195 PPSVAEGANVDILPDDKGLSGCFFGAPDCPVANMPAIDLESGKFYFTFFAPGAPAAELVS 254 Query 178 LKYHAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSA 234 +KY + +EW+SDA+ G +SP LSADGS VY N LWA+++A G KWS Sbjct 255 MKYSGGDNPAITQEWSSDALPGGSASSPDLSADGSVVYTNDNWGTLWAIDSATGDPKWSY 314 Query 235 PLGFLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGV 294 +G+ A P+ + GLI+ GG D L A +D GDHAE W R D+ L + Sbjct 315 DIGYAAAGSPSTSADGLIIPAGGLDGHLLALQDKGDHAELVWERKDLLQLGVPAQTAGST 374 Query 295 GYTVISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQ 354 GY V+ +GT GL++L FD G T++ LPGA G+ VG SVG V+T T G+ Sbjct 375 GYAVV----REGTDGLAMLTFDTGTGETLDQETLPGAKGFTVGTSVGPKGEVLTPTLLGE 430 Query 355 VY 356 ++ Sbjct 431 LF 432 >gi|312140525|ref|YP_004007861.1| pyrrolo-quinoline quinone dehydrogenase [Rhodococcus equi 103S] gi|311889864|emb|CBH49181.1| putative secreted pyrrolo-quinoline quinone dehydrogenase [Rhodococcus equi 103S] Length=436 Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 140/362 (39%), Positives = 195/362 (54%), Gaps = 16/362 (4%) Query 6 ALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPG 65 +++A G + L T AGC++ +Q D GR+RWC R+ G + P+ D N+YVG+ G Sbjct 77 SVAANGQVFLTAATDAGCNVFSFQVDT-GRKRWCARVGPGAALSTPVVDRATNMYVGEDG 135 Query 66 AIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLV- 124 A++SF RWR PV G P + +F G G LL T LGQ+ V D + G V +P DL+ Sbjct 136 AMLSFDERGQLRWRTPVTGTPLSAQFTGDGNLLFVTQLGQVNVVDPQTGRTVAAPYDLIP 195 Query 125 -------DGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVG 177 IDP G+ DC P CPVA +PA NG +VV+ W+PG P A LV Sbjct 196 PASYPQGANIDPLPNDLGVQDCLAGGPLCPVATSPAIDLDNGRIVVTFWRPGAPQADLVA 255 Query 178 LKY---HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSA 234 L+Y ++ EW++ ++AG ++PVLS DG TVY N LWAL+A G +W Sbjct 256 LRYGDGERPRITEEWSTGTLAAGSASAPVLSRDGKTVYANDNAGHLWALDAESGAVRWQY 315 Query 235 PLGFLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGV 294 LG+ + P+++ G I+ G + L A RD GD AE W R DV + + Sbjct 316 DLGYAVRGGPSVSGSGAIIPAGAENGRLLALRDRGDRAEVLWERADVVQRGAPAQTSSST 375 Query 295 GYTVISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQ 354 YTV+ DG GL+LL FD G T++ LPGA+G G SVG V+T T G+ Sbjct 376 AYTVV----RDGNNGLALLTFDTTTGETLDQDALPGASGSTAGTSVGPGGEVLTPTLIGE 431 Query 355 VY 356 ++ Sbjct 432 LF 433 >gi|226365918|ref|YP_002783701.1| hypothetical protein ROP_65090 [Rhodococcus opacus B4] gi|226244408|dbj|BAH54756.1| hypothetical protein [Rhodococcus opacus B4] Length=395 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 145/364 (40%), Positives = 202/364 (56%), Gaps = 20/364 (5%) Query 6 ALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPG 65 +++A G + + +T GC+L +Q D+ GR+RWC +L G + P+ DG N+YVG+ G Sbjct 36 SVAASGQIFVTARTEKGCNLFSYQMDS-GRKRWCRQLAPGVVASTPVVDGAANVYVGEDG 94 Query 66 AIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLV- 124 AI SF RWR PV+G P + +F G G LL T LGQ+ V +T+ G V +P DLV Sbjct 95 AINSFNEYGQLRWRTPVVGTPLSAQFTGDGNLLFITQLGQINVVNTQNGQKVVAPYDLVP 154 Query 125 -----DGID----PTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKL 175 DG D P D +GL C P CPVA PA +G +++ PG A+L Sbjct 155 PPSFADGADVDILPDD--KGLRGCFFGAPDCPVANMPAIDLESGKFYFTLFAPGASQAEL 212 Query 176 VGLKYHAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKW 232 V +KY + +EW+SD + G +SP LSADGS VY N +WA+++A G KW Sbjct 213 VAMKYSGGDNPAITQEWSSDTLPGGSASSPDLSADGSVVYANDNWGTMWAIDSATGDPKW 272 Query 233 SAPLGFLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGT 292 S +G+ A P+ + GLI+ GGPD L A +D GDHAE W R D+ L + Sbjct 273 SYDIGYAAAGSPSTSADGLIIPAGGPDGHLLALQDKGDHAELVWERKDLLQLGVPAQTAG 332 Query 293 GVGYTVISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSD 352 GY V+ +GT GL++L FD G T++ LPGA G+ VG SVG V+T T Sbjct 333 STGYAVV----REGTDGLAMLTFDTGTGETLDQDTLPGAKGFTVGTSVGPKGEVLTPTLL 388 Query 353 GQVY 356 G+++ Sbjct 389 GELF 392 >gi|325675855|ref|ZP_08155539.1| hypothetical protein HMPREF0724_13321 [Rhodococcus equi ATCC 33707] gi|325553826|gb|EGD23504.1| hypothetical protein HMPREF0724_13321 [Rhodococcus equi ATCC 33707] Length=435 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 141/362 (39%), Positives = 196/362 (55%), Gaps = 16/362 (4%) Query 6 ALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPG 65 +++A G + L T AGC++ +Q D GR+RWC R+ G + P+ D N+YVG+ G Sbjct 76 SVAANGQVFLTAATDAGCNVFSFQVDT-GRKRWCARVGPGAALSTPVVDRATNMYVGEDG 134 Query 66 AIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLV- 124 A++SF RWR PV G P + +F G G LL T LGQ+ V D + G V +P DL+ Sbjct 135 AMLSFDERGQLRWRTPVTGTPLSAQFTGDGNLLFVTQLGQVNVVDPQTGRTVAAPYDLIP 194 Query 125 -------DGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVG 177 IDP G+ DC P CPVA +PA NG +VV+ W+PG P A LV Sbjct 195 PASYPQGANIDPLPNDLGVQDCFAGGPLCPVATSPAIDLDNGRIVVTFWRPGAPQADLVA 254 Query 178 LKY---HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSA 234 L+Y ++ EW++ ++AG ++PVLS DG TVY N LWAL+A G +W Sbjct 255 LRYGDGERPRITEEWSTSTLAAGSASAPVLSRDGRTVYANDNAGHLWALDAESGSVRWQY 314 Query 235 PLGFLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGV 294 LG+ + P+++ G I+ G + L A RD GD AE W R DV + Sbjct 315 DLGYAVRGGPSVSGSGAIIPAGAENGRLLALRDRGDRAEVLWERADVVQRGAPAQTSGST 374 Query 295 GYTVISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQ 354 YTV+ DG GL+LL FD A+G T++ LPGA+G G SVG V+T T G+ Sbjct 375 AYTVV----RDGDNGLALLTFDTASGETLDQDALPGASGSTAGTSVGPGGEVLTPTLIGE 430 Query 355 VY 356 ++ Sbjct 431 LF 432 >gi|229493367|ref|ZP_04387156.1| PQQ enzyme repeat domain protein [Rhodococcus erythropolis SK121] gi|229319683|gb|EEN85515.1| PQQ enzyme repeat domain protein [Rhodococcus erythropolis SK121] Length=435 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 140/369 (38%), Positives = 194/369 (53%), Gaps = 16/369 (4%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 +AA +++A G + +T GC+L +Q D GR++WC RL G + P+ D N+Y Sbjct 71 VAAYASVAANGQSFVTARTENGCNLFSFQMDT-GRKKWCARLNDGVVASTPIVDTATNVY 129 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VG+ GA++SF T RWR V+G P + +F G G LL T LGQ+ V D + G V Sbjct 130 VGESGAMMSFTETGQLRWRTLVVGTPLSSQFTGDGNLLFITQLGQINVLDPQTGAKVLPS 189 Query 121 VDLVD--GIDP------TDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPA 172 DL+ ID +GL +C GCPVA PA G + + P A Sbjct 190 FDLIPPPSIDQGANAELIPDNKGLNECFLGTAGCPVANTPAVDLGTGKFYFTFYGPSSQA 249 Query 173 AKLVGLKY---HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGK 229 A LV +KY + REW++DA+ G +SP LS DG TVY + LWA+NA G Sbjct 250 ADLVAMKYTGGDNPSITREWSTDALPGGTASSPDLSKDGKTVYATDNNGSLWAVNAETGD 309 Query 230 AKWSAPLGFLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASL 289 +WS +GF + + + GLI+ GG L A RD GDHAE AW R D+ L + Sbjct 310 TRWSYDIGFNSAGSASTSDDGLIIPAGGDKGHLLAVRDEGDHAELAWERKDLLQLGVPAQ 369 Query 290 AGTGVGYTVISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTA 349 GYTV+ +G GLSL+ FD G TV+ LPGA G+ VG S+G V+T Sbjct 370 TAGNTGYTVV----REGENGLSLITFDTETGETVDQDTLPGAVGFTVGTSIGPKGEVLTP 425 Query 350 TSDGQVYSF 358 ++ G+++ F Sbjct 426 SAIGELFVF 434 >gi|226305854|ref|YP_002765814.1| hypothetical protein RER_23670 [Rhodococcus erythropolis PR4] gi|226184971|dbj|BAH33075.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=436 Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 139/369 (38%), Positives = 192/369 (53%), Gaps = 16/369 (4%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 +AA +++A G + +T GC L +Q D GR++WC RL G + P+ D N+Y Sbjct 72 VAAYASVAANGQSFVTARTENGCDLFSFQMDT-GRKKWCARLNDGVVASTPVVDTATNVY 130 Query 61 VGQPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSP 120 VG+ GA++SF T RWR V+G P + +F G G LL T LGQ+ V D + G V Sbjct 131 VGESGAMMSFTETGQLRWRTLVVGTPLSSQFTGDGNLLFITQLGQINVLDPQTGAKVVPS 190 Query 121 VDLVD--GIDP------TDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPA 172 DL+ ID +GL +C GCPVA PA G + + P A Sbjct 191 FDLIPPPSIDQGANAELIPDNKGLNECFLGTSGCPVANTPAVDLGTGKFYFTFYGPSSQA 250 Query 173 AKLVGLKY---HAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGK 229 A LV +KY + REW++DA+ G +SP LS DG TVY + LWA+NA G Sbjct 251 ADLVAMKYTGGDNPSITREWSTDALPGGTASSPDLSKDGKTVYATDNNGSLWAVNAETGD 310 Query 230 AKWSAPLGFLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASL 289 +WS +GF + + + GLI+ GG L A RD GDHAE W R D+ L + Sbjct 311 TRWSYDIGFNSAGSASTSDDGLIIPAGGDKGHLLAVRDEGDHAELVWERKDLLQLGVPAQ 370 Query 290 AGTGVGYTVISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTA 349 GYTV+ +G GLSL+ FD G TV+ LPGA G+ VG S+G V+T Sbjct 371 TAGNTGYTVV----REGENGLSLITFDTETGETVDQDTLPGAVGFTVGTSIGPKGEVLTP 426 Query 350 TSDGQVYSF 358 ++ G+++ F Sbjct 427 SAIGELFVF 435 >gi|54026254|ref|YP_120496.1| hypothetical protein nfa42830 [Nocardia farcinica IFM 10152] gi|54017762|dbj|BAD59132.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=415 Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 138/356 (39%), Positives = 186/356 (53%), Gaps = 15/356 (4%) Query 13 LALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGAIISFPP 72 + L +T +GC+++ Q GR+R+C RL + DG N+Y G GA+ S+ Sbjct 65 IFLTTRTASGCAILSLQM-PTGRKRFCDRLGPNTISSPTAVDGGTNVYFGDDGAVNSYNL 123 Query 73 TQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLV---DGIDP 129 RWR PV G+P + +F G G +L T GQ+ V + + G V L+ D ++ Sbjct 124 LGQPRWRTPVAGVPVSVQFTGDGHVLTITQSGQVDVLERQTGKRVVPTTQLLGEPDFLEH 183 Query 130 TDATR-----GLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQ 184 D TR GL DCA P CP+A A +G V+VWQPGEPAA LV ++Y ++ Sbjct 184 PDLTRPASGNGLEDCATGGPQCPIATVSAIDESSGRFFVTVWQPGEPAADLVAMRYADQR 243 Query 185 LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPP 244 L REW++ ++ G SP LSADG TVYV RL AL+ ADG+ KW L F Sbjct 244 LHREWSAQLLTGGSATSPALSADGGTVYVGDNSGRLLALDTADGRTKWVHQLAFTPAGAI 303 Query 245 ALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNH 304 ++ GLIV G + L A RD GD E AW R D+ G+GYT + Sbjct 304 SVAADGLIVP-AGDEGYLMALRDTGDGVETAWERKDLALRGLPVQTAGGIGYTTAA---- 358 Query 305 DGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 GL+L+ FD A G T++S LPGA G G SVG VV AT G+V++F P Sbjct 359 -IGAGLNLVTFDTATGATIDSDVLPGAQGSTTGTSVGPKGEVVVATRIGEVFAFEP 413 >gi|289763211|ref|ZP_06522589.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289710717|gb|EFD74733.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=108 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 107/108 (99%), Positives = 108/108 (100%), Gaps = 0/108 (0%) Query 253 VSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDGTPGLSL 312 +SGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDGTPGLSL Sbjct 1 MSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDGTPGLSL 60 Query 313 LVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 LVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP Sbjct 61 LVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 108 >gi|317506035|ref|ZP_07963865.1| hypothetical protein HMPREF9336_00234 [Segniliparus rugosus ATCC BAA-974] gi|316255693|gb|EFV14933.1| hypothetical protein HMPREF9336_00234 [Segniliparus rugosus ATCC BAA-974] Length=417 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 128/330 (39%), Positives = 180/330 (55%), Gaps = 11/330 (3%) Query 3 AGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVG 62 A P++S+RG++ + T +GC+ + + +GR+RWC+R G + PL D FD Y+G Sbjct 66 AQPSVSSRGFVGVTALTESGCNTFSF-DLADGRKRWCLRRYLGVELSTPLVDQFDTTYLG 124 Query 63 QPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVD 122 Q G + + +W PV+G P F G G LLV THLGQ+ V DT G P++ Sbjct 125 QAGTVAALAQNDSVKWSDPVLGTPVGSAFTGDGNLLVVTHLGQIEVLDTVNGRTTSPPIE 184 Query 123 LVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHA 182 LV + D+ +GLADCA P CPVAA A+ S +G V+S W PG AA+LVG++Y A Sbjct 185 LVPVSNRADSAQGLADCAVRGPRCPVAAPAAYDSRSGRFVLSFWPPGAEAAQLVGMRYDA 244 Query 183 --EQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 240 + L +W + A +G +PV+SADG+ V +L A G WSAP G Sbjct 245 AGKSLWVDWRATAEHSGPFGTPVISADGAAVVAVDGGGQLSAYRMDSGAKLWSAPTGRAG 304 Query 241 QTPPALTPHGLIVSGGGPD-TALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVI 299 + PA+ P G + G G D ALAA+ D G W+RDD+ LS +L G G+ +I Sbjct 305 TSVPAMAPDGTTILGAGSDPAALAAYTDKGQL----WKRDDLRCLSPVTLTGASDGFVLI 360 Query 300 SGPNHDGTPGLSLLVFDPANGHTVNSYPLP 329 + P G G +LL FD G T ++ LP Sbjct 361 ASP---GGTGSALLRFDAGTGATRSTTELP 387 >gi|296394665|ref|YP_003659549.1| hypothetical protein Srot_2268 [Segniliparus rotundus DSM 44985] gi|296181812|gb|ADG98718.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=419 Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 127/350 (37%), Positives = 179/350 (52%), Gaps = 10/350 (2%) Query 3 AGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVG 62 A P++S+RG++ + +T +GC+ + + GR+RWC+R G + PL D FD +Y+G Sbjct 66 AQPSVSSRGFVGVAARTESGCNTFSF-DIEAGRKRWCLRRFFGVELSTPLVDQFDTVYLG 124 Query 63 QPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVD 122 Q G I +F +W PV+G P G LLV THLGQ+ V ++ G +V PV+ Sbjct 125 QAGLIAAFAQNDSVKWSDPVLGTPIGSALTSDGNLLVVTHLGQIEVVNSINGQIVSPPVE 184 Query 123 LVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHA 182 LV D DA GLADCA P CPVA+ PA+ +G V S W PG PAA+LVG++Y+A Sbjct 185 LVPVADRADAAHGLADCASRGPQCPVASQPAYDPGSGRFVFSFWPPGAPAAQLVGMRYNA 244 Query 183 --EQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLA 240 + L +W + A G L P ++ADGS L A +DG W P G Sbjct 245 ADKTLRVDWRAPAAHPGPLGMPAITADGSAAIAIDAAGVLSAHRLSDGTQLWRTPTGAAG 304 Query 241 QTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVIS 300 + A P+G +V G G A A WRRDD+ LS A+L G ++ Sbjct 305 TSVLAAAPNGTVVIGAGSAAAPLAAYTGTGQ---LWRRDDLRCLSPATLTAEHDGLVLVV 361 Query 301 GPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYP-VGVSVGNDRRVVTA 349 + G+ +L+ FD G T + LPG P G+SV ++V A Sbjct 362 SADGKGS---ALVRFDAETGATRETTELPGLPPAPSAGISVAPGGQLVFA 408 >gi|296140621|ref|YP_003647864.1| hypothetical protein Tpau_2927 [Tsukamurella paurometabola DSM 20162] gi|296028755|gb|ADG79525.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=444 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 119/364 (33%), Positives = 179/364 (50%), Gaps = 13/364 (3%) Query 3 AGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVG 62 A PA+S RG +++ + GC+ + GR+ +C R G P+ D F+ Y+G Sbjct 73 AQPAISNRGVISVTARPDTGCTTFSLEL-TVGRKTYCRRDAPGADLQAPVVDQFEYTYLG 131 Query 63 QPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVD 122 PG + +F P RWR P G P + G +L THLGQ+++ ++ G G+ + Sbjct 132 VPGWLYTFNPDSQVRWRYPTAGTPLWIKLAGDNTVLAITHLGQMVLVNSHDGDAAGAAIG 191 Query 123 LVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHA 182 LV + D G+ DCA PGC V PA + + V V PG P +K++ + Y Sbjct 192 LVPKVSANDNGAGIEDCATNGPGCLVTGPPAVDTASERAFVVVAPPGAP-SKVMAVDYGK 250 Query 183 E------QLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPL 236 + L W ++ GV+ SP LSAD T+YVN R +L AL+AA G KW+ L Sbjct 251 KDGSSRHDLRYAWERKDIADGVIGSPALSADRKTLYVNLRSKKLAALDAATGATKWTHDL 310 Query 237 GFLAQTPPALTPHGLIVSG--GGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGV 294 G+ PP+++P G I+ G + A +D GD ++R DV +S A+ G+ Sbjct 311 GYQTSVPPSVSPDGTIIPAAPGLQRGSFVALQDQGDSVREVFKRTDVAMVSPATQIRGGI 370 Query 295 GYTVISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQ 354 GY V T L+ F G T+ ++ LP GVS+G D +VT ++G Sbjct 371 GYAVTRSWAGVQT---QLIEFRTDTGTTLRTFDLPDGIKSTSGVSIGPDGELVTVGNEGD 427 Query 355 VYSF 358 VY+F Sbjct 428 VYAF 431 >gi|343926885|ref|ZP_08766378.1| hypothetical protein GOALK_072_01070 [Gordonia alkanivorans NBRC 16433] gi|343763245|dbj|GAA13304.1| hypothetical protein GOALK_072_01070 [Gordonia alkanivorans NBRC 16433] Length=445 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 112/356 (32%), Positives = 182/356 (52%), Gaps = 9/356 (2%) Query 7 LSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGA 66 +S +G + + GC+++ + +GR+ +C + G L D +D Y+G+ Sbjct 88 ISGKGNVGVTSNATQGCNVLVL-DGRSGRKNFCKDMRAGVEVNAMLVDQYDQPYLGEEAT 146 Query 67 IISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDG 126 ++F RWR VIG+P + +F +LV+T GQ+L+ DT+R +V V L D Sbjct 147 FLAFNAGGAIRWRAGVIGVPLSAKFAAPNEVLVTTTQGQILLIDTQRNELVAPEVKLRDD 206 Query 127 IDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQLV 186 DP + G DC P C + A A + ++ + G ++++ +KY+ Sbjct 207 ADPEEPLLGFGDCVRNGPQCAIPAPAAVDTDRERFYLNFFPQGAASSQIRAMKYNKVAGK 266 Query 187 RE----WTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQT 242 RE W +D V +GV+ +P LSADG+T+Y RD ++ ALN +G KW+ +G Sbjct 267 REVRTAWQTD-VPSGVIGTPTLSADGATLYAFSRDGKIVALNTENGSTKWTQDIGGHGFA 325 Query 243 PPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGP 302 ++P GLI+ G L +RDAGD AE W+R D+ +S ++L +TV+ Sbjct 326 TMTVSPDGLIIPTGSLGAPLTLYRDAGDRAEKVWQRTDLATVSLSALTQQKTAWTVVRDA 385 Query 303 NHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSF 358 D LSL+ +G T + PLP ++G+ GVSV ++ TAT+ G+VY F Sbjct 386 GKD---TLSLVEVSTDDGATKRTLPLPNSSGFATGVSVSYWGQIATATNLGEVYFF 438 >gi|262203155|ref|YP_003274363.1| pyrrolo-quinoline quinone [Gordonia bronchialis DSM 43247] gi|262086502|gb|ACY22470.1| Pyrrolo-quinoline quinone [Gordonia bronchialis DSM 43247] Length=447 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 117/356 (33%), Positives = 183/356 (52%), Gaps = 9/356 (2%) Query 7 LSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGA 66 +S R +A+ +T GC+ + + +GR+ +C R+ +G + L D +D Y+G+ Sbjct 89 VSTRSNVAVTSRTENGCNTFVF-DPTSGRKNFCKRMREGVEVSALLIDQYDQPYIGEQTT 147 Query 67 IISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDG 126 ++F RWR PV+G+P + +F LV T GQ+ +FDT+ +V + L Sbjct 148 FLAFNAGGAIRWRAPVLGVPLSAKFAAPNIALVVTTQGQIQLFDTQTAALVAPELLLRPD 207 Query 127 IDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYH----A 182 DP D G +C P C V A PA + + ++VW PG A+++ YH Sbjct 208 ADPADPLFGFGECVDNGPRCVVPAPPAVDAAHERFFLNVWPPGAIASQVRAFTYHQVDGK 267 Query 183 EQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQT 242 + W +D V GV+ +SADG+TVY R ++ AL+AA GK +W+ G Sbjct 268 RTVAEAWHAD-VPGGVVGPATVSADGATVYAFSRLGQIVALDAATGKTRWTFDNGGYGFA 326 Query 243 PPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGP 302 A++P GLI+ G P L RD GD AE W+RDD+ ++S ++L +G +TV+ P Sbjct 327 TMAVSPDGLIMPTGVPGAPLTLLRDKGDRAELVWKRDDLASVSLSTLTSSGTAWTVVRDP 386 Query 303 NHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSF 358 G LSL+ A+G + PLP + G+ GV+V ++ AT G+VY F Sbjct 387 ---GAQTLSLVEVSTADGAPKRTLPLPESVGFATGVAVSPSGQIAVATHIGEVYFF 439 >gi|326381502|ref|ZP_08203196.1| pyrrolo-quinoline quinone [Gordonia neofelifaecis NRRL B-59395] gi|326199749|gb|EGD56929.1| pyrrolo-quinoline quinone [Gordonia neofelifaecis NRRL B-59395] Length=437 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 119/355 (34%), Positives = 181/355 (51%), Gaps = 12/355 (3%) Query 11 GYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGAIISF 70 G + ++ +TP GC++M + GR+ +C R+ G L D F Y+G+PG ++F Sbjct 88 GDVMVSARTPNGCNMMAL-DYRAGRKNFCKRMADGFWGNSALIDQFSQPYIGEPGRFLAF 146 Query 71 PPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDGIDPT 130 RWR+ V G P++ +F G GR+LV+T LGQ+L+ +++ G P + Sbjct 147 TGGGAIRWRKDVSGAPTSAKFAGPGRVLVTTSLGQVLMLNSQNGDDA-MPERRLWSNPAA 205 Query 131 DATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY----HAEQLV 186 D GL DC GC ++A PA + V+ + G ++L L Y E +V Sbjct 206 DPLTGLGDCVTGAAGCAISAPPAVDWSHQRFFVNFFPQGAKQSQLKALGYGQRGAGETIV 265 Query 187 REWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPAL 246 W +D + GV+ P +SADG+TVY GRD RL+AL+AA G KWS G ++ Sbjct 266 DLWATD-LPGGVVGPPTVSADGATVYAFGRDGRLYALDAASGAIKWSFDTGGYGFGTMSV 324 Query 247 TPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVI-SGPNHD 305 +P G+IV G L RD GD AE RR D+ ++L G +TV+ +G + Sbjct 325 SPDGVIVPAGTIGAPLVVVRDTGDKAEEVVRRTDLQTTGLSTLTAAGTLWTVVRTGADQQ 384 Query 306 GTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 L L+ D +G T + P+P A G+ G++V R+ AT+ G VY + P Sbjct 385 ----LELMELDTRSGATKRTLPMPEAKGFATGIAVSPTGRLAVATNIGAVYYYNP 435 >gi|319949301|ref|ZP_08023379.1| hypothetical protein ES5_07756 [Dietzia cinnamea P4] gi|319437039|gb|EFV92081.1| hypothetical protein ES5_07756 [Dietzia cinnamea P4] Length=443 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 112/357 (32%), Positives = 158/357 (45%), Gaps = 22/357 (6%) Query 22 GCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQPGAIISFPPTQWTRWRQP 81 GC+L D+ GR+RWC RL G DG +L+V G + + RW Sbjct 88 GCNLFALTADD-GRKRWCSRLPTDGPRITATVDGRGSLFVPAYGGVAAVAAEGENRWFAA 146 Query 82 VIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDGIDPTDATRGLADCAP 141 G+P+T + + LL+ +HLG V + G+ V + + I D GL CA Sbjct 147 TRGVPTTVTLMDNRHLLLVSHLGVARVVNAHTGLDVTPELRITGDIATDDPAYGLPWCAT 206 Query 142 ARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKY---HAEQLVREWTSDAVSAGV 198 GCPV A A + T ++ W PG +LV ++ A L W ++ G Sbjct 207 GARGCPVPATAAVDTDAATAYLTAWTPGAAEPELVAVRLVGDDAPALEVLWRV-PLTEGR 265 Query 199 LASP-VLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGG- 256 L P VLS D VYV+ D L A AADG A WSAP+G+ PAL P G +V+ G Sbjct 266 LGVPVVLSGDRDEVYVHAADGALAAYRAADGTALWSAPVGYRPDASPALLPDGTLVTAGR 325 Query 257 ------GPDTA---------LAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISG 301 GPD + A R WRRDD+ L+ + G + Sbjct 326 TTTVWRGPDDEHDDDAGPAPVVAVRPVDGTGREVWRRDDLQQLTNPAATPDGQVIVAVRA 385 Query 302 PNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSF 358 PG+++ V D +G TV+ +P A+G G+SV + R+ T+ G VY F Sbjct 386 GGGGDEPGIAVHVLDGGDGRTVHRLEVPAASGPVSGLSVDAEGRIALTTAMGAVYMF 442 >gi|255034566|ref|YP_003085187.1| Pyrrolo-quinoline quinone [Dyadobacter fermentans DSM 18053] gi|254947322|gb|ACT92022.1| Pyrrolo-quinoline quinone [Dyadobacter fermentans DSM 18053] Length=421 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/367 (28%), Positives = 153/367 (42%), Gaps = 21/367 (5%) Query 4 GPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGP-LFDGFDNLYVG 62 GP + G++ L T AG + + G+ WC V A L D LY+ Sbjct 64 GPTIGKDGHVYLT--TNAGDCHLYALDPQTGKTIWCSEEVNQFAVASSALVDEQGRLYIA 121 Query 63 QPGAIISFPPTQWTRWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVD 122 A+ +F W + G P + +F GRL+ TH+G + V D G ++ P Sbjct 122 DNEAMHAFDVAGNLLWETKIKGFPLSAQFTHTGRLIFITHIGIIYVLDRTNGAMMLDPHP 181 Query 123 LVDGI------DPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLV 176 L + DP RG ADC P A A G + W PG A L Sbjct 182 LSAELPPDPDFDPRACMRGTADC-------PCANTLAVDQETGRFFFTYWAPGAAQAGLR 234 Query 177 GLKYHAEQ---LVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWS 233 + Y ++ L W + ++ G +SP +S DGS +YVN + L A+ AA G W+ Sbjct 235 AMVYSEKKGPSLKPLWENTSLPGGSASSPDISVDGSRIYVNDNEGGLHAIEAATGANIWT 294 Query 234 APLGFLAQTPPALTPHGLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTG 293 +G+ + +P GLI+ GG L +D G A W+ D + L G Sbjct 295 FAIGYEPGGSQSTSPEGLIMPAGGGTAPLMCIQDVGPEARMVWKNDSLNHLGLPMQTGGH 354 Query 294 VGYTVISGPNHDGTPGLSLLVFDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDG 353 + + ++G L+V D G ++ P PG T + VG ++G + V DG Sbjct 355 LAFATVAGSPTKARK--DLVVVDTRTGEVLDRVPFPGKTLFTVGTTIGAEGNVYVPGFDG 412 Query 354 QVYSFAP 360 +++F P Sbjct 413 TLFAFRP 419 >gi|345004696|ref|YP_004807549.1| pyrrolo-quinoline quinone repeat-containing protein [halophilic archaeon DL31] gi|344320322|gb|AEN05176.1| Pyrrolo-quinoline quinone repeat-containing protein [halophilic archaeon DL31] Length=418 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/64 (52%), Positives = 38/64 (60%), Gaps = 3/64 (4%) Query 189 WTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTP 248 WT V AG+ A+PV+ DG TVYV D RL AL+AA G WS LG TPPALT Sbjct 258 WTR-TVDAGIQAAPVVQ-DG-TVYVQANDGRLLALDAATGTEAWSTRLGQRGATPPALTS 314 Query 249 HGLI 252 L+ Sbjct 315 DWLV 318 >gi|148557151|ref|YP_001264733.1| pyrrolo-quinoline quinone [Sphingomonas wittichii RW1] gi|148502341|gb|ABQ70595.1| Pyrrolo-quinoline quinone [Sphingomonas wittichii RW1] Length=630 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 76/279 (28%), Positives = 109/279 (40%), Gaps = 47/279 (16%) Query 8 SARG--YLALNGQTPAGCSLMEW--QNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLYVGQ 63 SARG + L+ P G L E Q D +G + GF P+ D ++Y+G Sbjct 103 SARGRTFSNLHAIGPDGKILWEAPPQRDRDGLDAFA-------GFNAPVLDHDGDVYIGD 155 Query 64 PGAIISFPPTQWTRW--RQP------VIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGM 115 + +F P +W R P V + S ++G T G +L FD G Sbjct 156 SNQLWAFHPDGRRKWVARLPEGSGSFVYQVISRQGYVGG-----ITTEGWVLFFDRTSGS 210 Query 116 VVGSPVDLVDGIDPTDATR-------GLADCAPARP--------GCPVAAAPAFSSVNGT 160 P L G P GL D + G VA APA G Sbjct 211 PAVKPFRLPQGEAPATGPHLPGLWQGGLVDHDAGKLFEKIAFGFGVQVANAPAVHPTTGR 270 Query 161 VVVSVWQPGE---PAAKLVGLKYHAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRD 217 + ++ P E + +L GL + V+ S + G SP +S DG VY G D Sbjct 271 IFITAAGPKEGDRYSGRLYGLDI-VDGEVKIGFSTRMDGGSGTSPSISPDGRYVYCAGED 329 Query 218 HRLWALNAADGKAKWSAP-LGFLAQTPPALTPHGLIVSG 255 + A++A G +WSA G L+ P+L G I++G Sbjct 330 GVILAIDADSGAVRWSAQGEGLLS---PSLAADGTILTG 365 >gi|333988568|ref|YP_004521175.1| PKD domain-containing protein [Methanobacterium sp. SWAN-1] gi|333826712|gb|AEG19374.1| PKD domain containing protein [Methanobacterium sp. SWAN-1] Length=880 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 44/163 (27%), Positives = 71/163 (44%), Gaps = 13/163 (7%) Query 204 LSADGSTVYVNGRDH-RLWALNAADGKAKWSAPLGFLA-----QTPPALTPHGLIVSGGG 257 +S+DG T+YV L+ALN ADG KWS G + Q+ P + G I Sbjct 210 ISSDGKTLYVGSYGAVALYALNTADGTLKWSYSTGTSSSKGGIQSTPVIGSDGTIYVATY 269 Query 258 PDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDGTPGLSLLVFDP 317 L A D GDHA W ++ +++ G T+ G G++ + Sbjct 270 GTGILYAITDNGDHATVKWNTTIGSSYGNIAISSNG---TIYVGCFK---TGVNFYAVNS 323 Query 318 ANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSFAP 360 ++G + + L AT V +G+D + T++G +Y+ P Sbjct 324 SDGSILYNCSLTKATSVSTPV-IGSDGTIYIGTTNGILYALNP 365 >gi|339009361|ref|ZP_08641933.1| cell surface protein [Brevibacillus laterosporus LMG 15441] gi|338773839|gb|EGP33370.1| cell surface protein [Brevibacillus laterosporus LMG 15441] Length=395 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 64/284 (23%), Positives = 119/284 (42%), Gaps = 41/284 (14%) Query 1 LAAGPALSARGYLALNGQTPAGCSLMEWQNDNNGRQRWCVRLVQGGGFAGPLFDGFDNLY 60 + + P ++A G + + T G +QN GR W L G + +Y Sbjct 89 IKSSPVVTANGTIYV---TSNGGEFYAYQN---GRINWKTLL--KGDLTSSVIGKDGTIY 140 Query 61 VGQPGAII-SFPPTQWTRWRQPVIGMPSTPRFLGH-GRLLVSTHLGQLLVFD-------- 110 G ++ + P+ +W + +G +T LG G + V T G+L F+ Sbjct 141 TGSTEHLLFAVYPSGVKKWEKRTVGEVTTSPALGSDGTIYVGTGDGKLQAFNENGSEKWT 200 Query 111 -TRRGMVVGSPV---DLVDGIDPTDATRGLADCAPARP------GCPVAAAPAFSSVNGT 160 + + V +P+ D V + +D A + P+ +P + +GT Sbjct 201 FSSKAPVTTAPIISKDQVVYVGNSDGKLYAVHAASGKSKWTLALNAPMKQSPVIGN-DGT 259 Query 161 VVVSVWQPGEPAAKLVGLKYHAEQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRL 220 + + G K+ + + ++ +W S +V + +SP + ++G T+YV Sbjct 260 LYL-----GTEDGKIYAIASNGKE---KW-STSVGKKITSSPAIDSNG-TLYVGTDSGMF 309 Query 221 WALNAADGKAKWSAPLGFLAQTPPALTPHGLI--VSGGGPDTAL 262 +AL++ +GK KWS G ++ P L +G+I V+G G AL Sbjct 310 FALDSKNGKTKWSYNGGHQIESAPILDANGVIYMVTGNGVLRAL 353 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 65/264 (25%), Positives = 97/264 (37%), Gaps = 51/264 (19%) Query 85 MPSTPRFLGHGRLLVSTHLGQLLVFDTRR----GMVVGSPVDLVDGIDPTDATRGLADCA 140 + S+P +G + V+++ G+ + R ++ G V G D T T Sbjct 89 IKSSPVVTANGTIYVTSNGGEFYAYQNGRINWKTLLKGDLTSSVIGKDGTIYTGSTEHLL 148 Query 141 PA-----------RPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQLVREW 189 A R V +PA S +GT+ V G KL + + +W Sbjct 149 FAVYPSGVKKWEKRTVGEVTTSPALGS-DGTIYV-----GTGDGKLQAFNENGSE---KW 199 Query 190 TSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTPH 249 T + A V +P++S D VYV D +L+A++AA GK+KW+ L + P + Sbjct 200 TFSS-KAPVTTAPIISKD-QVVYVGNSDGKLYAVHAASGKSKWTLALNAPMKQSPVIGND 257 Query 250 GLIVSGGGPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHD---- 305 G + G D + A G W T VG + S P D Sbjct 258 GTLYL-GTEDGKIYAIASNGKE---KWS--------------TSVGKKITSSPAIDSNGT 299 Query 306 ---GTPGLSLLVFDPANGHTVNSY 326 GT D NG T SY Sbjct 300 LYVGTDSGMFFALDSKNGKTKWSY 323 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 48/165 (30%), Positives = 68/165 (42%), Gaps = 19/165 (11%) Query 197 GVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGG 256 G L S V+ DG T+Y +H L+A+ + G KW T PAL G I G Sbjct 126 GDLTSSVIGKDG-TIYTGSTEHLLFAVYPS-GVKKWEKRTVGEVTTSPALGSDGTIYVGT 183 Query 257 GPDTALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGPNHDGTPGLSLLVFD 316 G D L AF + G W ++TA + V+ N DG L Sbjct 184 G-DGKLQAFNENGSEK---WTFSSKAPVTTAPIISKD---QVVYVGNSDG----KLYAVH 232 Query 317 PANGHTVNSYPLPGATGYPVGVS--VGNDRRVVTATSDGQVYSFA 359 A+G + + L P+ S +GND + T DG++Y+ A Sbjct 233 AASGKSKWTLALNA----PMKQSPVIGNDGTLYLGTEDGKIYAIA 273 >gi|297172108|gb|ADI23090.1| FOG: WD40-like repeat [uncultured gamma proteobacterium HF0770_07M15] Length=385 Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust. Identities = 59/224 (27%), Positives = 89/224 (40%), Gaps = 25/224 (11%) Query 143 RPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQLVREWTSDAVSAGVLASP 202 G PV + PA + +GTV V G K+ L + ++W + + + SP Sbjct 38 ETGAPVISFPALGA-DGTVYV-----GSADGKVYAL--DGKTGAKKWELETGKSNWVYSP 89 Query 203 VLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGF--LAQTPPALTPHGLIVSGGGPDT 260 L ADG TVYV R ++++AL+ G KW G L AL G++ G G + Sbjct 90 TLGADG-TVYVGSRFNKVYALDGKTGAKKWEFETGKSNLGVRSTALGADGILYVGSGDNK 148 Query 261 ALAAFRDAGDHAEGAWRRDDVTALSTASLAGTGVGYTVISGP------NHDGTPGLSLLV 314 A R G W + + + +L G+ TV G DG G + Sbjct 149 VYALDRKTGAK---KWEFETGAEVRSTAL---GLDGTVYMGSWDKKVYALDGKTGAKIWA 202 Query 315 FDPANGHTVNSYPLPGATGYPVGVSVGNDRRVVTATSDGQVYSF 358 F G V+S P GA G S N + + +++ F Sbjct 203 F--VTGGIVSSSPALGADGILYVGSRDNKVYALDGKTGAKIWEF 244 Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust. Identities = 38/114 (34%), Positives = 55/114 (49%), Gaps = 16/114 (14%) Query 145 GCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHAEQLVREW---TSDAVSAGVLAS 201 G V +PA + NGTV V W K+ L + V++W T D VS+ S Sbjct 248 GGGVTFSPALGA-NGTVYVGSWDK-----KVYAL--DGKTGVKKWEFVTGDRVSS----S 295 Query 202 PVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSG 255 P L ADG +YV D++++AL+ G KW G ++ PAL G++ G Sbjct 296 PTLGADG-ILYVGSEDNKVYALDGKTGIKKWEFETGEEVRSSPALGLGGILYVG 348 >gi|301057577|ref|ZP_07198657.1| PQQ enzyme repeat protein [delta proteobacterium NaphS2] gi|300448301|gb|EFK11986.1| PQQ enzyme repeat protein [delta proteobacterium NaphS2] Length=497 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 24/77 (32%), Positives = 39/77 (51%), Gaps = 1/77 (1%) Query 187 REWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPAL 246 ++W D G+ +SP + ADG+ + G D L+A+N DG KW+ G + + PA+ Sbjct 230 KKWVFDTEGFGIQSSPAVGADGTVYILGGSDGNLYAVN-PDGSKKWAFKTGSGSASSPAI 288 Query 247 TPHGLIVSGGGPDTALA 263 G++ G G A Sbjct 289 GSDGVVYVGSGDKNIYA 305 >gi|290963109|ref|YP_003494291.1| transmembrane serine/threonine protein kinase D [Streptomyces scabiei 87.22] gi|260652635|emb|CBG75768.1| TRANSMEMBRANE SERINE/THREONINE-PROTEIN KINASE D PKND (PROTEIN KINASE D) (STPK D) [Streptomyces scabiei 87.22] Length=754 Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust. Identities = 28/67 (42%), Positives = 37/67 (56%), Gaps = 2/67 (2%) Query 198 VLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPALTPHGLIVSGGG 257 + ++PVLS D T+YV RD L+AL+AA G KWS G + PA+ + SG G Sbjct 607 IESAPVLSGD--TLYVGSRDETLYALDAATGAEKWSVASGDWQGSAPAVVGDTVYASGEG 664 Query 258 PDTALAA 264 AL A Sbjct 665 ELMALHA 671 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 43/122 (36%), Positives = 58/122 (48%), Gaps = 13/122 (10%) Query 123 LVDGIDPTDATRGLADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLKYHA 182 L DGID D+ G A G V +AP S +GTV V+ K+ L A Sbjct 423 LYDGIDGEDSPTGGNRWTFATTGA-VKSAPVVS--DGTVYVT-----SNDRKVYALD--A 472 Query 183 EQLVREWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQT 242 R+W A + ASP +S G TVYV RD +++AL+AA G KW+ G ++ Sbjct 473 ATGDRKWAYRTGEA-IEASPFVS--GGTVYVGSRDGKVYALDAATGDKKWAYTTGAGVES 529 Query 243 PP 244 P Sbjct 530 TP 531 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 33/87 (38%), Positives = 43/87 (50%), Gaps = 6/87 (6%) Query 187 REWTSDAVSAGVLASPVLSADGSTVYVNGRDHRLWALNAADGKAKWSAPLGFLAQTPPAL 246 R+W S V PV+S DG TVYV D +++AL+ A G KW+ P ++ P L Sbjct 557 RKW-SHRTEGAVETRPVVS-DG-TVYVGSGDSKVYALDTATGDEKWTYPTRDWIESAPVL 613 Query 247 TPHGLIVSGGGPDTALAAFRDAGDHAE 273 + L V G D L A DA AE Sbjct 614 SGDTLYV--GSRDETLYAL-DAATGAE 637 >gi|313117324|ref|YP_004044307.1| WD-40 repeat-containing protein [Halogeometricum borinquense DSM 11551] gi|312294215|gb|ADQ68646.1| WD-40 repeat-containing protein [Halogeometricum borinquense DSM 11551] Length=411 Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust. Identities = 64/220 (30%), Positives = 96/220 (44%), Gaps = 35/220 (15%) Query 77 RWRQPVIGMPSTPRFLGHGRLLVSTHLGQLLVFDTRRGMVVGSPVDLVDGIDPTDATRGL 136 +WR + G S R L GR +V+ H +L+ D + G +V R L Sbjct 107 QWRTTLGGKDSNGRVLVGGRFIVA-HDSRLVALDPQNGDIVWQ--------------RSL 151 Query 137 ADCAPARPGCPVAAAPAFSSVNGTVVVSVWQPGEPAAKLVGLK-YHAEQLVREWTSDAVS 195 A P+ G A A +GTV+V P + GLK + AE R W + ++ Sbjct 152 AGLEPSGLGSS-AELLAADERSGTVIV-------PYSD--GLKAFQAEDGQRRWETGEIT 201 Query 196 AGVLASPVLSADGSTVYVNGRDH---RLWALNAADGKAKWSAPLGFLAQTPPALTPHGLI 252 G L +P + DG TVY GR L AL DG +W+ L + P T G++ Sbjct 202 -GQLNTPAIY-DG-TVYTIGRVDGVDSLVALALDDGTIRWTTALEDPSDGDPVATDQGVL 258 Query 253 VSGGGPDTALAAFRDAGD-HAEGAWRRDDVTALSTASLAG 291 V G +T + R+ GD +E D++ +L+T + G Sbjct 259 VVDG--NTLVVHDRETGDRRSEIELVSDELGSLTTIAADG 296 Lambda K H 0.318 0.136 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 672876525450 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40