BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3040c Length=288 Score E Sequences producing significant alignments: (Bits) Value gi|15610177|ref|NP_217556.1| hypothetical protein Rv3040c [Mycob... 574 6e-162 gi|339633048|ref|YP_004724690.1| hypothetical protein MAF_30470 ... 573 1e-161 gi|289444603|ref|ZP_06434347.1| conserved hypothetical protein [... 572 2e-161 gi|15842604|ref|NP_337641.1| hypothetical protein MT3125 [Mycoba... 571 4e-161 gi|339295876|gb|AEJ47987.1| hypothetical protein CCDC5079_2797 [... 535 4e-150 gi|183981675|ref|YP_001849966.1| hypothetical protein MMAR_1661 ... 459 2e-127 gi|118617497|ref|YP_905829.1| hypothetical protein MUL_1898 [Myc... 457 6e-127 gi|240169561|ref|ZP_04748220.1| hypothetical protein MkanA1_0962... 453 1e-125 gi|254821936|ref|ZP_05226937.1| hypothetical protein MintA_18532... 432 2e-119 gi|296171166|ref|ZP_06852614.1| NUDIX family hydrolase [Mycobact... 428 4e-118 gi|41409186|ref|NP_962022.1| hypothetical protein MAP3088c [Myco... 427 7e-118 gi|118466372|ref|YP_883067.1| hydrolase, nudix family protein, p... 427 1e-117 gi|254776326|ref|ZP_05217842.1| hydrolase, nudix family protein,... 427 1e-117 gi|342858116|ref|ZP_08714771.1| hypothetical protein MCOL_04561 ... 425 4e-117 gi|108798825|ref|YP_639022.1| NUDIX hydrolase [Mycobacterium sp.... 379 3e-103 gi|126434426|ref|YP_001070117.1| NUDIX hydrolase [Mycobacterium ... 378 4e-103 gi|118471036|ref|YP_886673.1| nudix hydrolase [Mycobacterium sme... 375 3e-102 gi|120403080|ref|YP_952909.1| NUDIX hydrolase [Mycobacterium van... 371 7e-101 gi|315445181|ref|YP_004078060.1| NUDIX family protein [Mycobacte... 364 7e-99 gi|145224850|ref|YP_001135528.1| NUDIX hydrolase [Mycobacterium ... 363 2e-98 gi|333991407|ref|YP_004524021.1| hypothetical protein JDM601_276... 354 1e-95 gi|169630464|ref|YP_001704113.1| hypothetical protein MAB_3383c ... 304 1e-80 gi|289763216|ref|ZP_06522594.1| NTP pyrophosphohydrolase includi... 296 3e-78 gi|226365914|ref|YP_002783697.1| hypothetical protein ROP_65050 ... 248 9e-64 gi|291006620|ref|ZP_06564593.1| NUDIX hydrolase [Saccharopolyspo... 247 2e-63 gi|325675851|ref|ZP_08155535.1| NUDIX family hydrolase [Rhodococ... 246 4e-63 gi|302530877|ref|ZP_07283219.1| NUDIX hydrolase [Streptomyces sp... 245 7e-63 gi|312140529|ref|YP_004007865.1| nudix superfamily hydrolase [Rh... 244 1e-62 gi|300790646|ref|YP_003770937.1| hypothetical protein AMED_8844 ... 241 7e-62 gi|54026261|ref|YP_120503.1| hypothetical protein nfa42900 [Noca... 239 3e-61 gi|257057566|ref|YP_003135398.1| NUDIX family protein [Saccharom... 237 1e-60 gi|256374402|ref|YP_003098062.1| NUDIX hydrolase [Actinosynnema ... 236 4e-60 gi|111023413|ref|YP_706385.1| hypothetical protein RHA1_ro06452 ... 234 1e-59 gi|226305850|ref|YP_002765810.1| hypothetical protein RER_23630 ... 233 2e-59 gi|326381496|ref|ZP_08203190.1| NUDIX hydrolase [Gordonia neofel... 226 5e-57 gi|296140607|ref|YP_003647850.1| NUDIX hydrolase [Tsukamurella p... 223 2e-56 gi|72160519|ref|YP_288176.1| hypothetical protein Tfu_0115 [Ther... 219 5e-55 gi|262203164|ref|YP_003274372.1| NUDIX hydrolase [Gordonia bronc... 214 1e-53 gi|271962039|ref|YP_003336235.1| NUDIX hydrolase [Streptosporang... 214 1e-53 gi|343926892|ref|ZP_08766385.1| hypothetical protein GOALK_072_0... 214 1e-53 gi|296268195|ref|YP_003650827.1| NUDIX hydrolase [Thermobispora ... 208 1e-51 gi|269129037|ref|YP_003302407.1| NUDIX hydrolase [Thermomonospor... 205 5e-51 gi|319949158|ref|ZP_08023247.1| NUDIX superfamily hydrolase [Die... 205 5e-51 gi|294630570|ref|ZP_06709130.1| NUDIX family hydrolase [Streptom... 197 1e-48 gi|134096938|ref|YP_001102599.1| NUDIX hydrolase [Saccharopolysp... 196 3e-48 gi|337766877|emb|CCB75588.1| NUDIX hydrolase [Streptomyces cattl... 193 3e-47 gi|334563492|ref|ZP_08516483.1| NUDIX domain-containing protein ... 192 5e-47 gi|284028442|ref|YP_003378373.1| NUDIX hydrolase [Kribbella flav... 191 8e-47 gi|297159227|gb|ADI08939.1| hypothetical protein SBI_05819 [Stre... 191 1e-46 gi|345016223|ref|YP_004818577.1| NUDIX hydrolase [Streptomyces v... 190 2e-46 >gi|15610177|ref|NP_217556.1| hypothetical protein Rv3040c [Mycobacterium tuberculosis H37Rv] gi|31794218|ref|NP_856711.1| hypothetical protein Mb3066c [Mycobacterium bovis AF2122/97] gi|121638924|ref|YP_979148.1| hypothetical protein BCG_3064c [Mycobacterium bovis BCG str. Pasteur 1173P2] 66 more sequence titles Length=288 Score = 574 bits (1479), Expect = 6e-162, Method: Compositional matrix adjust. Identities = 288/288 (100%), Positives = 288/288 (100%), Gaps = 0/288 (0%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD Sbjct 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH Sbjct 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY Sbjct 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV Sbjct 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL 288 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL Sbjct 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL 288 >gi|339633048|ref|YP_004724690.1| hypothetical protein MAF_30470 [Mycobacterium africanum GM041182] gi|339332404|emb|CCC28117.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=288 Score = 573 bits (1476), Expect = 1e-161, Method: Compositional matrix adjust. Identities = 287/288 (99%), Positives = 288/288 (100%), Gaps = 0/288 (0%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD Sbjct 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH Sbjct 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY Sbjct 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DTYFFVGALPEGQR+DGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV Sbjct 181 DTYFFVGALPEGQRSDGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL 288 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL Sbjct 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL 288 >gi|289444603|ref|ZP_06434347.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289571239|ref|ZP_06451466.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289751712|ref|ZP_06511090.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289417522|gb|EFD14762.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289544993|gb|EFD48641.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289692299|gb|EFD59728.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=288 Score = 572 bits (1475), Expect = 2e-161, Method: Compositional matrix adjust. Identities = 287/288 (99%), Positives = 287/288 (99%), Gaps = 0/288 (0%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD Sbjct 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH Sbjct 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY Sbjct 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV Sbjct 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL 288 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQ RRSGGSTGWPL Sbjct 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQTRRSGGSTGWPL 288 >gi|15842604|ref|NP_337641.1| hypothetical protein MT3125 [Mycobacterium tuberculosis CDC1551] gi|13882918|gb|AAK47455.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length=288 Score = 571 bits (1472), Expect = 4e-161, Method: Compositional matrix adjust. Identities = 287/288 (99%), Positives = 287/288 (99%), Gaps = 0/288 (0%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD Sbjct 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 DR RDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH Sbjct 61 DRXRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY Sbjct 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV Sbjct 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL 288 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL Sbjct 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL 288 >gi|339295876|gb|AEJ47987.1| hypothetical protein CCDC5079_2797 [Mycobacterium tuberculosis CCDC5079] gi|339299489|gb|AEJ51599.1| hypothetical protein CCDC5180_2762 [Mycobacterium tuberculosis CCDC5180] Length=268 Score = 535 bits (1377), Expect = 4e-150, Method: Compositional matrix adjust. Identities = 268/268 (100%), Positives = 268/268 (100%), Gaps = 0/268 (0%) Query 21 MLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAWAGPPPQ 80 MLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAWAGPPPQ Sbjct 1 MLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAWAGPPPQ 60 Query 81 WWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYGDARRAL 140 WWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYGDARRAL Sbjct 61 WWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYGDARRAL 120 Query 141 ADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEGQRADGENT 200 ADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEGQRADGENT Sbjct 121 ADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEGQRADGENT 180 Query 201 ESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVADVLAVERQIVPVQPQLARN 260 ESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVADVLAVERQIVPVQPQLARN Sbjct 181 ESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVADVLAVERQIVPVQPQLARN 240 Query 261 GDNWEIEFFDSDRYNQARRSGGSTGWPL 288 GDNWEIEFFDSDRYNQARRSGGSTGWPL Sbjct 241 GDNWEIEFFDSDRYNQARRSGGSTGWPL 268 >gi|183981675|ref|YP_001849966.1| hypothetical protein MMAR_1661 [Mycobacterium marinum M] gi|183175001|gb|ACC40111.1| conserved hypothetical protein [Mycobacterium marinum M] Length=280 Score = 459 bits (1181), Expect = 2e-127, Method: Compositional matrix adjust. Identities = 238/288 (83%), Positives = 253/288 (88%), Gaps = 8/288 (2%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 MNSP P P RPAATVMLVRD G +GL+VFLMRRHAAMDFAAGVMVFPGGGVD Sbjct 1 MNSP--PDSVPLQARPAATVMLVRD--TGLDTGLSVFLMRRHAAMDFAAGVMVFPGGGVD 56 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 DRDR+ADLG LGAWAGPPP WWAQRFGI+PDLAEALVCAAARETFEESGVLFAGP D Sbjct 57 DRDRNADLGGLGAWAGPPPLWWAQRFGIQPDLAEALVCAAARETFEESGVLFAGPADD-- 114 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 P+ IV DAS+Y ++R ALAD TLSFADFL+RE LVLR+DLLRPWANW+TPEAE TRRY Sbjct 115 --PDGIVGDASIYSESRAALADHTLSFADFLRREDLVLRADLLRPWANWITPEAERTRRY 172 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DT+FFVGALPEGQRADGENTESDRA W+LP DAIADFAAGRNFLLPPTWTQLD+LAGHTV Sbjct 173 DTFFFVGALPEGQRADGENTESDRAEWMLPRDAIADFAAGRNFLLPPTWTQLDALAGHTV 232 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL 288 ADVLAVER+IVPVQP LA GDNWEIEFFDSDRYNQAR SGGST WPL Sbjct 233 ADVLAVERKIVPVQPNLALKGDNWEIEFFDSDRYNQARISGGSTVWPL 280 >gi|118617497|ref|YP_905829.1| hypothetical protein MUL_1898 [Mycobacterium ulcerans Agy99] gi|118569607|gb|ABL04358.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=280 Score = 457 bits (1177), Expect = 6e-127, Method: Compositional matrix adjust. Identities = 237/288 (83%), Positives = 254/288 (89%), Gaps = 8/288 (2%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 MNSP +P+ P RPAATVMLVRD G +GL+VFLMRRHAAMDFAAGVMVFPGGGVD Sbjct 1 MNSPPDPV--PLQARPAATVMLVRD--TGLDTGLSVFLMRRHAAMDFAAGVMVFPGGGVD 56 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 DRDR+ADLG LGAWAGPPP WWAQRFGI+PDLAEALVCAAARETFEESGVLFAGP D Sbjct 57 DRDRNADLGGLGAWAGPPPLWWAQRFGIQPDLAEALVCAAARETFEESGVLFAGPADD-- 114 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 P+ IV DAS+Y ++R ALAD TLSFADFL+RE LVLR+DLLRPWANW+TPEAE TRRY Sbjct 115 --PDGIVGDASIYSESRAALADHTLSFADFLRRENLVLRADLLRPWANWITPEAERTRRY 172 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DT+FFVGALPEGQRADGENTESDRA W+LP DAIADFAAGRNFLLPPTWTQLD+LAGHTV Sbjct 173 DTFFFVGALPEGQRADGENTESDRAEWMLPRDAIADFAAGRNFLLPPTWTQLDALAGHTV 232 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL 288 ADVLAVER+IVPVQP LA GDN EIEFFDSDRYNQAR SGGST WPL Sbjct 233 ADVLAVERKIVPVQPNLALKGDNREIEFFDSDRYNQARISGGSTVWPL 280 >gi|240169561|ref|ZP_04748220.1| hypothetical protein MkanA1_09627 [Mycobacterium kansasii ATCC 12478] Length=278 Score = 453 bits (1166), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 238/288 (83%), Positives = 247/288 (86%), Gaps = 10/288 (3%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 MNSP E + P PRPAATVMLVRD + S +GL+VFLMRRH+AMDFAAGVMVFPGGGVD Sbjct 1 MNSPPEQV--PLVPRPAATVMLVRDAEPDSGAGLSVFLMRRHSAMDFAAGVMVFPGGGVD 58 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 DRDR+AD+ AWAGPPP WWAQRFG EPDLAEALVCAAARETFEESGVLFAGP Sbjct 59 DRDRNADI----AWAGPPPLWWAQRFGTEPDLAEALVCAAARETFEESGVLFAGPAHD-- 112 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 PNSIV DASVY + R ALADRTLSFADFL RE LVLRSDLLRPWANWVTPEAELTRRY Sbjct 113 --PNSIVRDASVYREYRAALADRTLSFADFLGREDLVLRSDLLRPWANWVTPEAELTRRY 170 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DTYFFVGALPEGQRADGENTESDRA W LP DAI DFAAGRN LLPPTWTQLD+LAG TV Sbjct 171 DTYFFVGALPEGQRADGENTESDRADWTLPQDAIDDFAAGRNILLPPTWTQLDALAGRTV 230 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL 288 ADVLAVER IVPVQP LA GDNWEIEFFDSDRYNQARRSGG T WPL Sbjct 231 ADVLAVERTIVPVQPNLALQGDNWEIEFFDSDRYNQARRSGGFTAWPL 278 >gi|254821936|ref|ZP_05226937.1| hypothetical protein MintA_18532 [Mycobacterium intracellulare ATCC 13950] Length=276 Score = 432 bits (1112), Expect = 2e-119, Method: Compositional matrix adjust. Identities = 227/286 (80%), Positives = 240/286 (84%), Gaps = 12/286 (4%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 M SP E P PRPAATVMLVRD + GL VFLMRRHA M+FAAG MVFPGGGVD Sbjct 1 MTSPEEA---PLVPRPAATVMLVRD----TGPGLGVFLMRRHAKMEFAAGTMVFPGGGVD 53 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 DRDR+AD+ AWAGPPP+WWAQRFGIEPDLAEALVCAAARETFEESGVLFAGP + Sbjct 54 DRDRNADI----AWAGPPPEWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPAGRGR 109 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 SAP+SIV DASVYGDARRALAD TLSFADFL+RE L LRSDLLRPWANWVTPEAE TRRY Sbjct 110 SAPDSIVGDASVYGDARRALADGTLSFADFLRRENLELRSDLLRPWANWVTPEAERTRRY 169 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DTYFFVGALP+GQRADGENTESDRAGW P AI DFAAGR+FLLPPTWTQLDSLAG TV Sbjct 170 DTYFFVGALPKGQRADGENTESDRAGWTTPEAAIEDFAAGRSFLLPPTWTQLDSLAGRTV 229 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGW 286 A+VLAVERQIV VQP L GDNW EFFDSDRY+QAR +GG GW Sbjct 230 AEVLAVERQIVAVQPHLEIQGDNWVFEFFDSDRYHQAREAGG-LGW 274 >gi|296171166|ref|ZP_06852614.1| NUDIX family hydrolase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894302|gb|EFG74057.1| NUDIX family hydrolase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=276 Score = 428 bits (1101), Expect = 4e-118, Method: Compositional matrix adjust. Identities = 228/286 (80%), Positives = 238/286 (84%), Gaps = 12/286 (4%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 M SP EP P PRPAATVMLVRD D G G+AVFLMRRHA M+FAAG MVFPGGGVD Sbjct 1 MTSPTEP---PLVPRPAATVMLVRD-DPG---GIAVFLMRRHAKMEFAAGTMVFPGGGVD 53 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 DRDR+ADLG +GAWAGPPPQWWA RFGIEP LAEALVCAAARETFEESGVLFAGP Sbjct 54 DRDRNADLGGIGAWAGPPPQWWAGRFGIEPGLAEALVCAAARETFEESGVLFAGPAGD-- 111 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 P+ IV DASVY DARR LAD TLSFADFL+RE L LRSDLLRPWANWVTPEAE TRRY Sbjct 112 --PDGIVGDASVYADARRELADGTLSFADFLRRENLELRSDLLRPWANWVTPEAERTRRY 169 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DTYFFVGALPEGQRADGENTESDRAGW P AI DF+AGR FLLPPTWTQLDSLAG TV Sbjct 170 DTYFFVGALPEGQRADGENTESDRAGWTTPQAAIEDFSAGRCFLLPPTWTQLDSLAGRTV 229 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGW 286 A+VLAVERQIVPVQP L GDNW EFFDSDRY+QAR +GG GW Sbjct 230 AEVLAVERQIVPVQPHLEIQGDNWVFEFFDSDRYHQAREAGG-MGW 274 >gi|41409186|ref|NP_962022.1| hypothetical protein MAP3088c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398006|gb|AAS05636.1| hypothetical protein MAP_3088c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459267|gb|EGO38212.1| NUDIX family protein [Mycobacterium avium subsp. paratuberculosis S397] Length=276 Score = 427 bits (1099), Expect = 7e-118, Method: Compositional matrix adjust. Identities = 224/286 (79%), Positives = 241/286 (85%), Gaps = 12/286 (4%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 M SP E P PRPAATVMLVRD + +GL VFLMRRH+ M+FAAGVMVFPGGGVD Sbjct 1 MTSPEEA---PLVPRPAATVMLVRD----APAGLKVFLMRRHSRMEFAAGVMVFPGGGVD 53 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 +RDR+ADLG LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGP Sbjct 54 ERDRNADLGGLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPA---- 109 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 AP+SIV DASVY DARRALAD TLSFADFL+ EKL LRSDLLRPWANWVTPEAE TRRY Sbjct 110 GAPDSIVGDASVYRDARRALADGTLSFADFLRTEKLELRSDLLRPWANWVTPEAERTRRY 169 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DTYFFVGALP+GQRADG+NTESDRAGW P A+ DF+AGR FLLPPTWTQLDSLAG TV Sbjct 170 DTYFFVGALPQGQRADGQNTESDRAGWTTPEAALEDFSAGRTFLLPPTWTQLDSLAGRTV 229 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGW 286 ADVLAV+RQI PVQP + GDNW EFFDSDRY++AR +GG GW Sbjct 230 ADVLAVQRQIAPVQPHVEIRGDNWVFEFFDSDRYHRAREAGG-LGW 274 >gi|118466372|ref|YP_883067.1| hydrolase, nudix family protein, putative [Mycobacterium avium 104] gi|118167659|gb|ABK68556.1| hydrolase, nudix family protein, putative [Mycobacterium avium 104] Length=276 Score = 427 bits (1098), Expect = 1e-117, Method: Compositional matrix adjust. Identities = 223/286 (78%), Positives = 241/286 (85%), Gaps = 12/286 (4%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 M SP E P PRPAATVMLVR+ + +GL VFLMRRH+ M+FAAGVMVFPGGGVD Sbjct 1 MTSPEEA---PLVPRPAATVMLVRE----APTGLKVFLMRRHSRMEFAAGVMVFPGGGVD 53 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 +RDR+ADLG LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGP Sbjct 54 ERDRNADLGGLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPA---- 109 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 AP+SIV DASVY DARRALAD TLSFADFL+ EKL LRSDLLRPWANWVTPEAE TRRY Sbjct 110 GAPDSIVGDASVYRDARRALADGTLSFADFLRTEKLELRSDLLRPWANWVTPEAERTRRY 169 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DTYFFVGALP+GQRADG+NTESDRAGW P A+ DF+AGR FLLPPTWTQLDSLAG TV Sbjct 170 DTYFFVGALPQGQRADGQNTESDRAGWTTPEAALEDFSAGRTFLLPPTWTQLDSLAGRTV 229 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGW 286 ADVLAV+RQI PVQP + GDNW EFFDSDRY++AR +GG GW Sbjct 230 ADVLAVQRQIAPVQPHVEIRGDNWVFEFFDSDRYHRAREAGG-LGW 274 >gi|254776326|ref|ZP_05217842.1| hydrolase, nudix family protein, putative [Mycobacterium avium subsp. avium ATCC 25291] Length=276 Score = 427 bits (1098), Expect = 1e-117, Method: Compositional matrix adjust. Identities = 223/286 (78%), Positives = 242/286 (85%), Gaps = 12/286 (4%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 M SP E P PRPAATVMLVR+ + +GL VFLMRRH+ M+FAAGVMVFPGGGVD Sbjct 1 MTSPEEA---PLVPRPAATVMLVRE----APAGLKVFLMRRHSRMEFAAGVMVFPGGGVD 53 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 +RDR+ADLG LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGP Sbjct 54 ERDRNADLGGLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPA---- 109 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 AP+SIV DASVY DARRALAD TLSFADFL+ EKL LRSDLLRPWANWVTPEAE TRRY Sbjct 110 GAPDSIVGDASVYRDARRALADGTLSFADFLRTEKLELRSDLLRPWANWVTPEAERTRRY 169 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV 240 DTYFFVGALP+GQRADG+NTESDRAGW P A+ DF+AGR+FLLPPTWTQLDSLAG TV Sbjct 170 DTYFFVGALPQGQRADGQNTESDRAGWTTPEAALEDFSAGRSFLLPPTWTQLDSLAGRTV 229 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGW 286 ADVLAV+RQI PVQP + GDNW EFFDSDRY++AR +GG GW Sbjct 230 ADVLAVQRQIAPVQPHVEIRGDNWVFEFFDSDRYHRAREAGG-LGW 274 >gi|342858116|ref|ZP_08714771.1| hypothetical protein MCOL_04561 [Mycobacterium colombiense CECT 3035] gi|342133820|gb|EGT87000.1| hypothetical protein MCOL_04561 [Mycobacterium colombiense CECT 3035] Length=276 Score = 425 bits (1092), Expect = 4e-117, Method: Compositional matrix adjust. Identities = 227/287 (80%), Positives = 243/287 (85%), Gaps = 14/287 (4%) Query 1 MNSPRE-PLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGV 59 M SP E PLV RPAATVMLVRD SGLAVFLMRRHA M+FAAG +VFPGGGV Sbjct 1 MTSPDEIPLVA----RPAATVMLVRD----DPSGLAVFLMRRHAKMEFAAGTVVFPGGGV 52 Query 60 DDRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQD 119 DDRDR+AD+ AWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGP Q Sbjct 53 DDRDRNADI----AWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPAGQG 108 Query 120 HSAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRR 179 SAP+SIV DASVYGDARRALA+R+LSFADFL++E LVLRSDLLRPWANWVTPEAE TRR Sbjct 109 LSAPDSIVGDASVYGDARRALAERSLSFADFLRQENLVLRSDLLRPWANWVTPEAERTRR 168 Query 180 YDTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHT 239 YDTYFFVGALP GQRADGENTESD AGW+ P AI +F AGR FLLPPTWTQLDSLAG T Sbjct 169 YDTYFFVGALPRGQRADGENTESDLAGWMTPRAAIDEFEAGRCFLLPPTWTQLDSLAGRT 228 Query 240 VADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGW 286 VA+VLAVERQIVPVQP+L GDNW EFFDSDRY++AR +GG GW Sbjct 229 VAEVLAVERQIVPVQPRLEIQGDNWVFEFFDSDRYHRAREAGG-LGW 274 >gi|108798825|ref|YP_639022.1| NUDIX hydrolase [Mycobacterium sp. MCS] gi|119867942|ref|YP_937894.1| NUDIX hydrolase [Mycobacterium sp. KMS] gi|108769244|gb|ABG07966.1| NUDIX hydrolase [Mycobacterium sp. MCS] gi|119694031|gb|ABL91104.1| NUDIX hydrolase [Mycobacterium sp. KMS] Length=275 Score = 379 bits (972), Expect = 3e-103, Method: Compositional matrix adjust. Identities = 198/279 (71%), Positives = 223/279 (80%), Gaps = 10/279 (3%) Query 1 MNSPREPLVPPP-TPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGV 59 M P + P P PRPAATVML+R G VFLMRRHA MDF AGVMVFPGGGV Sbjct 1 MTEPAQKSTPDPLVPRPAATVMLIRSA-RGVPETNEVFLMRRHAGMDFVAGVMVFPGGGV 59 Query 60 DDRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQD 119 DDRDR+AD+ AWAGP PQWWA+R G++ LAEALVCAAARETFEE GVLFAG D Sbjct 60 DDRDRNADI----AWAGPGPQWWAERLGVDEHLAEALVCAAARETFEECGVLFAGAADD- 114 Query 120 HSAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRR 179 P+ +V DASVY ++R ALA+R+LSFADFL+ EKLVLR+DLLRPWANWVTPE E TRR Sbjct 115 ---PDVLVDDASVYRESRLALANRSLSFADFLRTEKLVLRADLLRPWANWVTPEEERTRR 171 Query 180 YDTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHT 239 YDTYFFVGALP+GQ ADGENTE+D+AGWV P +A+ DFA GR+FLLPPTWTQLD+LAG T Sbjct 172 YDTYFFVGALPDGQLADGENTETDQAGWVTPEEALRDFADGRSFLLPPTWTQLDALAGRT 231 Query 240 VADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQAR 278 VA+VLAVER+I PVQP LA + NWEIEFFDSDRYN AR Sbjct 232 VAEVLAVERRIEPVQPTLAAHNGNWEIEFFDSDRYNAAR 270 >gi|126434426|ref|YP_001070117.1| NUDIX hydrolase [Mycobacterium sp. JLS] gi|126234226|gb|ABN97626.1| NUDIX hydrolase [Mycobacterium sp. JLS] Length=275 Score = 378 bits (971), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 198/279 (71%), Positives = 222/279 (80%), Gaps = 10/279 (3%) Query 1 MNSPREPLVPPP-TPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGV 59 M P + P P PRPAATVML+R G VFLMRRHA MDF AGVMVFPGGGV Sbjct 1 MTEPAQKSTPDPLVPRPAATVMLIRSA-RGVPETNEVFLMRRHAGMDFVAGVMVFPGGGV 59 Query 60 DDRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQD 119 DDRDR AD+ AWAGP PQWWA+R G++ LAEALVCAAARETFEE GVLFAG D Sbjct 60 DDRDRKADI----AWAGPGPQWWAERLGVDEHLAEALVCAAARETFEECGVLFAGAADD- 114 Query 120 HSAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRR 179 P+ +V DASVY ++R ALA+R+LSFADFL+ EKLVLR+DLLRPWANWVTPE E TRR Sbjct 115 ---PDVLVDDASVYRESRLALANRSLSFADFLRTEKLVLRADLLRPWANWVTPEEERTRR 171 Query 180 YDTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHT 239 YDTYFFVGALP+GQ ADGENTE+D+AGWV P +A+ DFA GR+FLLPPTWTQLD+LAG T Sbjct 172 YDTYFFVGALPDGQLADGENTETDQAGWVTPEEALRDFADGRSFLLPPTWTQLDALAGRT 231 Query 240 VADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQAR 278 VA+VLAVER+I PVQP LA + NWEIEFFDSDRYN AR Sbjct 232 VAEVLAVERRIEPVQPTLAAHNGNWEIEFFDSDRYNAAR 270 >gi|118471036|ref|YP_886673.1| nudix hydrolase [Mycobacterium smegmatis str. MC2 155] gi|118473609|ref|YP_885444.1| nudix hydrolase [Mycobacterium smegmatis str. MC2 155] gi|118172323|gb|ABK73219.1| nudix hydrolase [Mycobacterium smegmatis str. MC2 155] gi|118174896|gb|ABK75792.1| nudix hydrolase [Mycobacterium smegmatis str. MC2 155] Length=273 Score = 375 bits (964), Expect = 3e-102, Method: Compositional matrix adjust. Identities = 191/269 (72%), Positives = 215/269 (80%), Gaps = 6/269 (2%) Query 11 PPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGR 70 P P PAATVML+RD + L VFLMRRHAAMDF AGVMVFPGGGVDDRDR+AD+ Sbjct 5 PLVPLPAATVMLIRDVHREGRADLEVFLMRRHAAMDFVAGVMVFPGGGVDDRDRNADI-- 62 Query 71 LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDA 130 AW GP P WWAQR G++ LAEALVCAAARETFEESGVLFAGP Q+ I++DA Sbjct 63 --AWYGPEPSWWAQRLGVDEGLAEALVCAAARETFEESGVLFAGP--QNGPGDPGIIADA 118 Query 131 SVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALP 190 SVYGDAR ALA+ +LSFADFL+ EKLVLR+DLLRPWANWVTP+ E TRRYDTYFFV ALP Sbjct 119 SVYGDARAALANHSLSFADFLRDEKLVLRADLLRPWANWVTPKEERTRRYDTYFFVAALP 178 Query 191 EGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVADVLAVERQI 250 EGQRADGENTE+DRA W P + DF AG FLLPPTWTQLDSL G TVA+VLAVER+I Sbjct 179 EGQRADGENTETDRAFWCTPKAGLDDFEAGNTFLLPPTWTQLDSLDGRTVAEVLAVERKI 238 Query 251 VPVQPQLARNGDNWEIEFFDSDRYNQARR 279 V ++P L+ G+NWEIE+FDS RYN AR+ Sbjct 239 VTIEPSLSTEGNNWEIEYFDSGRYNAARK 267 >gi|120403080|ref|YP_952909.1| NUDIX hydrolase [Mycobacterium vanbaalenii PYR-1] gi|119955898|gb|ABM12903.1| NUDIX hydrolase [Mycobacterium vanbaalenii PYR-1] Length=277 Score = 371 bits (953), Expect = 7e-101, Method: Compositional matrix adjust. Identities = 191/277 (69%), Positives = 224/277 (81%), Gaps = 13/277 (4%) Query 11 PPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGR 70 P PRPAATVMLVRD + G+ VFLMRRH+AMDF AGVMVFPGGGVDDRDR+AD+ Sbjct 6 PLVPRPAATVMLVRD----TPEGIKVFLMRRHSAMDFVAGVMVFPGGGVDDRDRNADV-- 59 Query 71 LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDA 130 AW GP QWWA+RFG++ +LAEALVCAAARETFEESGVLFAG D P+ +V DA Sbjct 60 --AWHGPDRQWWAERFGVDVELAEALVCAAARETFEESGVLFAGAADD----PDLLVDDA 113 Query 131 SVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALP 190 SVY D R AL +++LSF +FL+ EKL+LR+DLLRPWANWVTP+ E TRRYDTYFFVGALP Sbjct 114 SVYRDQRAALENKSLSFGEFLRSEKLMLRADLLRPWANWVTPKEERTRRYDTYFFVGALP 173 Query 191 EGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVADVLAVERQI 250 +GQRADG+NTE+D+AGWV P A+ DFA GR+FLLPPTWTQLD+L G TVA+VLAVER+I Sbjct 174 QGQRADGDNTETDQAGWVTPQAALDDFADGRSFLLPPTWTQLDALNGRTVAEVLAVERKI 233 Query 251 VPVQPQL-ARNGDNWEIEFFDSDRYNQARRSGGSTGW 286 V V+P L A+ G NWEIEFF+SDRYN+AR G+ Sbjct 234 VAVEPSLAAQKGGNWEIEFFNSDRYNEARNRRSPQGY 270 >gi|315445181|ref|YP_004078060.1| NUDIX family protein [Mycobacterium sp. Spyr1] gi|315263484|gb|ADU00226.1| NUDIX family protein [Mycobacterium sp. Spyr1] Length=283 Score = 364 bits (935), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 187/277 (68%), Positives = 218/277 (79%), Gaps = 13/277 (4%) Query 11 PPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGR 70 P PRPAATVMLVRD + G+ +FLMRRH+AMDF AGVMVFPGGGVDDRDR+AD+ Sbjct 12 PLVPRPAATVMLVRD----TPEGIKIFLMRRHSAMDFVAGVMVFPGGGVDDRDRNADV-- 65 Query 71 LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDA 130 AW GP WWA+R G++ +LAEALVCAAARETFEESGVLFAG D P+ +V DA Sbjct 66 --AWHGPDRHWWAERLGVDAELAEALVCAAARETFEESGVLFAGAADD----PDLLVDDA 119 Query 131 SVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALP 190 SVY D R AL +++LSF +FL+ EKL+LR+DLLRPWANWVTP+ E TRRYDTYFFVGALP Sbjct 120 SVYRDQRAALENKSLSFGEFLRSEKLMLRADLLRPWANWVTPKEERTRRYDTYFFVGALP 179 Query 191 EGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVADVLAVERQI 250 +GQRADG+NTE+D+A WV P A+ DFA GR+FLLPPTWTQLD+L G TVA+VLAVER+I Sbjct 180 QGQRADGDNTETDKADWVTPQAALDDFAEGRSFLLPPTWTQLDALNGRTVAEVLAVERRI 239 Query 251 VPVQPQL-ARNGDNWEIEFFDSDRYNQARRSGGSTGW 286 V V+P L A G NWEIEFFD DRYN AR G+ Sbjct 240 VAVEPSLAATKGGNWEIEFFDGDRYNAARNRRAPQGY 276 >gi|145224850|ref|YP_001135528.1| NUDIX hydrolase [Mycobacterium gilvum PYR-GCK] gi|145217336|gb|ABP46740.1| NUDIX hydrolase [Mycobacterium gilvum PYR-GCK] Length=283 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 187/277 (68%), Positives = 217/277 (79%), Gaps = 13/277 (4%) Query 11 PPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGR 70 P PRPAATVMLVRD + G+ +FLMRRH+AMDF AGVMVFPGGGVDDRDR+AD+ Sbjct 12 PLVPRPAATVMLVRD----TPEGIKIFLMRRHSAMDFVAGVMVFPGGGVDDRDRNADV-- 65 Query 71 LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDA 130 AW GP WWA R G++ +LAEALVCAAARETFEESGVLFAG D P+ +V DA Sbjct 66 --AWHGPDRHWWAGRLGVDAELAEALVCAAARETFEESGVLFAGAADD----PDLLVDDA 119 Query 131 SVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALP 190 SVY D R AL +++LSF +FL+ EKL+LR+DLLRPWANWVTP+ E TRRYDTYFFVGALP Sbjct 120 SVYRDQRAALENKSLSFGEFLRSEKLMLRADLLRPWANWVTPKEERTRRYDTYFFVGALP 179 Query 191 EGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVADVLAVERQI 250 +GQRADG+NTE+D+A WV P A+ DFA GR+FLLPPTWTQLD+L G TVA+VLAVER+I Sbjct 180 QGQRADGDNTETDKADWVTPQAALDDFAEGRSFLLPPTWTQLDALNGRTVAEVLAVERKI 239 Query 251 VPVQPQL-ARNGDNWEIEFFDSDRYNQARRSGGSTGW 286 V V+P L A G NWEIEFFD DRYN AR G+ Sbjct 240 VAVEPSLAATKGGNWEIEFFDGDRYNAARNRRAPQGY 276 >gi|333991407|ref|YP_004524021.1| hypothetical protein JDM601_2767 [Mycobacterium sp. JDM601] gi|333487375|gb|AEF36767.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=272 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 193/262 (74%), Positives = 215/262 (83%), Gaps = 9/262 (3%) Query 17 AATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAWAG 76 AATVMLVR+ ++G L VFLMRRHAAM+FAAGVMVFPGGGVD+RDR A++ AW G Sbjct 14 AATVMLVRNGESGRGP-LDVFLMRRHAAMEFAAGVMVFPGGGVDERDRSAEV----AWFG 68 Query 77 PPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYGDA 136 P P WWAQRFG+E DLA ALVCAA RETFEESGVLFAGP D +V+DASVY DA Sbjct 69 PEPAWWAQRFGVEIDLAAALVCAAVRETFEESGVLFAGPADDSRR----VVADASVYADA 124 Query 137 RRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEGQRAD 196 RRAL+ LSFADFL+ E LVL ++LLRPWANWVTPEAE TRRYDTYFFV ALP GQRAD Sbjct 125 RRALSVGELSFADFLRTENLVLHAELLRPWANWVTPEAERTRRYDTYFFVAALPVGQRAD 184 Query 197 GENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVADVLAVERQIVPVQPQ 256 GENTESDRAGW+ P AI DFAAGR+FLLPPTWTQLDSLAG +V DVLA+ER+IV QP Sbjct 185 GENTESDRAGWLTPEAAIEDFAAGRSFLLPPTWTQLDSLAGRSVEDVLALEREIVVTQPG 244 Query 257 LARNGDNWEIEFFDSDRYNQAR 278 LAR GDNW+IEFF+S+RYN AR Sbjct 245 LARVGDNWQIEFFNSERYNAAR 266 >gi|169630464|ref|YP_001704113.1| hypothetical protein MAB_3383c [Mycobacterium abscessus ATCC 19977] gi|169242431|emb|CAM63459.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=275 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 163/271 (61%), Positives = 194/271 (72%), Gaps = 17/271 (6%) Query 11 PPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGR 70 PP P+PAATV+L+RD A G+ FLMRR AM FA G+ VFPGGGVD RD AD+ Sbjct 6 PPEPKPAATVVLIRD----GAVGVEAFLMRRDNAMAFAGGMTVFPGGGVDSRDMHADV-- 59 Query 71 LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDA 130 W GP WWAQ+FG+ P+LA ALVCAAARETFEE GVLFAG ++ NSIV DA Sbjct 60 --PWLGPDVDWWAQQFGVTPELASALVCAAARETFEECGVLFAG------TSENSIVEDA 111 Query 131 SVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALP 190 +VY AR+ L+D+TLSFA+FLQRE L LR+DLLRPWANW+TPEAE RRYDT+FFV ALP Sbjct 112 AVYHQARKDLSDKTLSFAEFLQREGLQLRADLLRPWANWITPEAE-PRRYDTFFFVAALP 170 Query 191 EGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSL--AGHTVADVLAVER 248 GQ ADG NTE+ +GW PA AIA F R+FLLPPTW+QLD++ AG +VA+VL V R Sbjct 171 AGQDADGNNTEAVASGWQTPAAAIAAFTERRSFLLPPTWSQLDAVSSAGASVAEVLGVAR 230 Query 249 QIVPVQPQLARNGDNWEIEFFDSDRYNQARR 279 I P+ P L W ++F D DRY AR+ Sbjct 231 SIAPIMPILTEQDGRWFVQFDDVDRYEAARQ 261 >gi|289763216|ref|ZP_06522594.1| NTP pyrophosphohydrolase including oxidative damage repair enzyme [Mycobacterium tuberculosis GM 1503] gi|289710722|gb|EFD74738.1| NTP pyrophosphohydrolase including oxidative damage repair enzyme [Mycobacterium tuberculosis GM 1503] Length=279 Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 194/264 (74%), Positives = 202/264 (77%), Gaps = 7/264 (2%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD Sbjct 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVC-AAARETFEESGVLFAGPVDQD 119 DRDRDADLGRLGAWAGPPPQWWAQRFGIEP+LAEALV +TFEESGVLFAGPVDQD Sbjct 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPELAEALVWRGGPGKTFEESGVLFAGPVDQD 120 Query 120 HSAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLR-SDLLRPWANWVTPEAELTR 178 HSA + S VYGDARR + + LVLR P AN P Sbjct 121 HSA-RTASSRMLVYGDARRDWRPDAVLCGLSAAGKNLVLRIPPCYGPGANLGPPRRPKLA 179 Query 179 RYDTYFFV--GALPEGQ-RADGENTESDRAGWVLPA-DAIADFAAGRNFLLPPTWTQLDS 234 R + + GALPE Q ENTES RAGWV P+ IADFAAGRNFLLPPTWTQLDS Sbjct 180 RALRHLLLLWGALPESQPPPTAENTESGRAGWVFPSPPPIADFAAGRNFLLPPTWTQLDS 239 Query 235 LAGHTVADVLAVERQIVPVQPQLA 258 LAGHTVADVLAVERQIVPVQPQLA Sbjct 240 LAGHTVADVLAVERQIVPVQPQLA 263 >gi|226365914|ref|YP_002783697.1| hypothetical protein ROP_65050 [Rhodococcus opacus B4] gi|226244404|dbj|BAH54752.1| hypothetical protein [Rhodococcus opacus B4] Length=280 Score = 248 bits (632), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 137/266 (52%), Positives = 175/266 (66%), Gaps = 13/266 (4%) Query 14 PRPAATVMLVRDPDAGSA-SGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLG 72 P+ A+TV+L+RD +AG+A SG+ VFL+RR M FA G+ VFPGGGVD D +A++ Sbjct 17 PKDASTVILIRDAEAGAAASGIEVFLLRRVKGMAFAGGMTVFPGGGVDPSDAEAEVD--- 73 Query 73 AWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASV 132 WAGP WWA RF + A+ALVCAA RETFEE GVL AGP +++V+D S Sbjct 74 -WAGPSVDWWAGRFSTDAARAKALVCAAVRETFEECGVLLAGPT------ADTVVADTSR 126 Query 133 YGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEG 192 Y AR L R LSF+DFL+RE LVLR+DLLRPWANW+TP E RRYDT FFV A P+G Sbjct 127 YAQARTQLETRELSFSDFLRRENLVLRADLLRPWANWITPVGE-GRRYDTRFFVAAAPQG 185 Query 193 QRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TVADVLAVERQIV 251 Q ADG +E++ W PA A+A + G + LLPPTW+QL +L + +VADVLA E +I Sbjct 186 QIADGATSEAEEVQWQSPAAALAHWQGGGSILLPPTWSQLTALGAYGSVADVLAAEPEIP 245 Query 252 PVQPQLARNGDNWEIEFFDSDRYNQA 277 + P L + +EF D Y +A Sbjct 246 VILPTLITGEEQLRVEFPGQDGYYEA 271 >gi|291006620|ref|ZP_06564593.1| NUDIX hydrolase [Saccharopolyspora erythraea NRRL 2338] Length=280 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 142/264 (54%), Positives = 167/264 (64%), Gaps = 16/264 (6%) Query 4 PREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRD 63 P P PP TP+ AATV+L+RD AG VFL RR M FA G+ VFPGGGVD RD Sbjct 19 PESPPDPPVTPKDAATVLLLRDGTAGPE----VFLQRRVKGMPFAGGMTVFPGGGVDPRD 74 Query 64 RDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAP 123 D + AW GP PQWWA++ G +LA ALVCAA RETFEESGVL AG + P Sbjct 75 ADTSV----AWNGPSPQWWARQLGCTEELARALVCAAVRETFEESGVLLAG------ADP 124 Query 124 NSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTY 183 ++VSD + + D R AL R LS A FL LVLRSDLLRPW+NWVTPEAE RRYDT Sbjct 125 GTVVSDTAAFADVRAALVSRELSLAGFLAGAGLVLRSDLLRPWSNWVTPEAE-PRRYDTR 183 Query 184 FFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLA-GHTVAD 242 FFV ALPEGQRAD +E+ A W P A+ D+ GR LLPPTW L +A +VA+ Sbjct 184 FFVAALPEGQRADAATSEASDAYWRTPRAALDDWRQGRCGLLPPTWVTLTEIAECGSVAE 243 Query 243 VLAVERQIVPVQPQLARNGDNWEI 266 L+ ER + V P+LAR W + Sbjct 244 ALSTERVLTKVVPKLARRDGRWHV 267 >gi|325675851|ref|ZP_08155535.1| NUDIX family hydrolase [Rhodococcus equi ATCC 33707] gi|325553822|gb|EGD23500.1| NUDIX family hydrolase [Rhodococcus equi ATCC 33707] Length=288 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 135/248 (55%), Positives = 166/248 (67%), Gaps = 16/248 (6%) Query 12 PTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRL 71 P P+ A+TVMLVRD D G+ VFL+RR A M FA G+ VFPGGGVD D AD+ Sbjct 31 PAPKDASTVMLVRDGD----DGVEVFLLRRVAGMAFAGGMTVFPGGGVDPSDGTADV--- 83 Query 72 GAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDAS 131 W+GP P WWA+RFG++ A+ALVCAA RETFEE GVL AGP + +++V+D + Sbjct 84 -RWSGPSPAWWAERFGVDEARAKALVCAAVRETFEECGVLLAGPTE------DTVVADTA 136 Query 132 VYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPE 191 Y +ARR L R LSFADFL RE LVLR+DLLRPWANW+TP E RRYDT FFV LPE Sbjct 137 GYAEARRQLESRELSFADFLTRENLVLRADLLRPWANWITPVQE-GRRYDTRFFVAVLPE 195 Query 192 GQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVAD-VLAVERQI 250 GQ ADGE +E+ W P A+ D+ R+ LLPPTW QL +L D +LA E +I Sbjct 196 GQNADGETSEAAEVAWRTPTAAVDDWRQRRSVLLPPTWRQLATLGEFDGVDAILAAEPEI 255 Query 251 VPVQPQLA 258 P+ P+L+ Sbjct 256 SPILPELS 263 >gi|302530877|ref|ZP_07283219.1| NUDIX hydrolase [Streptomyces sp. AA4] gi|302439772|gb|EFL11588.1| NUDIX hydrolase [Streptomyces sp. AA4] Length=274 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 140/258 (55%), Positives = 169/258 (66%), Gaps = 17/258 (6%) Query 10 PPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLG 69 PP TP+ AATV+L+RD + SG+ VFL R M FA G+ VFPGGGVD RD DA + Sbjct 26 PPATPKDAATVILLRD----APSGVEVFLQHRVMGMAFAGGMTVFPGGGVDPRDADASV- 80 Query 70 RLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSD 129 AWAGPPP WWA++F + LA ALVCAA RETFEESGVL AG D S+V+D Sbjct 81 ---AWAGPPPSWWAEQFTCDESLARALVCAAVRETFEESGVLLAGTED-------SVVAD 130 Query 130 ASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGAL 189 + Y +AR+AL R +S A FL L LR+DLL P+A+WVTP E RRYDT FFV L Sbjct 131 VAPYHEARKALESREISLAGFLADAGLTLRADLLHPYAHWVTPPQE-QRRYDTRFFVAKL 189 Query 190 PEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVAD-VLAVER 248 PEGQRADG +E+ AGW PA+A+AD GR L+PPTW L LA + AD VLA R Sbjct 190 PEGQRADGATSEAAAAGWQPPAEAVADAREGRRTLMPPTWLTLVELAEFSEADAVLAEPR 249 Query 249 QIVPVQPQLARNGDNWEI 266 +IV P L R+G+N + Sbjct 250 EIVKTVPTLVRDGENIRV 267 >gi|312140529|ref|YP_004007865.1| nudix superfamily hydrolase [Rhodococcus equi 103S] gi|311889868|emb|CBH49185.1| putative NUDIX superfamily hydrolase [Rhodococcus equi 103S] Length=288 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 134/248 (55%), Positives = 165/248 (67%), Gaps = 16/248 (6%) Query 12 PTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRL 71 P P+ A+TVMLVRD D G+ VFL+RR A M FA G+ VFPGGGVD D AD+ Sbjct 31 PAPKDASTVMLVRDGD----DGVEVFLLRRVAGMAFAGGMTVFPGGGVDPSDGTADV--- 83 Query 72 GAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDAS 131 W+GP P WWA+R G++ A+ALVCAA RETFEE GVL AGP + +++V+D + Sbjct 84 -RWSGPSPAWWAERLGVDEARAKALVCAAVRETFEECGVLLAGPTE------DTVVADTA 136 Query 132 VYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPE 191 Y +ARR L R LSFADFL RE LVLR+DLLRPWANW+TP E RRYDT FFV LPE Sbjct 137 GYAEARRQLESRELSFADFLTRENLVLRADLLRPWANWITPVQE-GRRYDTRFFVAVLPE 195 Query 192 GQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVAD-VLAVERQI 250 GQ ADGE +E+ W P A+ D+ R+ LLPPTW QL +L D +LA E +I Sbjct 196 GQNADGETSEAAEVAWRTPTAAVDDWRQRRSVLLPPTWRQLATLGEFDGVDAILAAEPEI 255 Query 251 VPVQPQLA 258 P+ P+L+ Sbjct 256 SPILPELS 263 >gi|300790646|ref|YP_003770937.1| hypothetical protein AMED_8844 [Amycolatopsis mediterranei U32] gi|299800160|gb|ADJ50535.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340532336|gb|AEK47541.1| hypothetical protein RAM_45380 [Amycolatopsis mediterranei S699] Length=272 Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 136/258 (53%), Positives = 160/258 (63%), Gaps = 17/258 (6%) Query 10 PPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLG 69 PP TP+ AATV+LVRD A G+ VFL R M FA G+ VFPGGGVD RD D + Sbjct 26 PPATPKDAATVILVRD----GADGVEVFLQHRVKGMPFAGGMTVFPGGGVDRRDADTSV- 80 Query 70 RLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSD 129 AWAGP P WWA RFG + LA AL CAA RETFEESGVL AG D ++++D Sbjct 81 ---AWAGPDPSWWASRFGCDDALARALTCAAVRETFEESGVLLAGSAD-------AVLTD 130 Query 130 ASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGAL 189 + Y AR+AL R +S A FL L LR+DLLRPWA+W+TPE E RRYDT F+V L Sbjct 131 VTPYAAARQALETREVSLAGFLAGAGLTLRADLLRPWAHWITPEQE-PRRYDTRFYVAKL 189 Query 190 PEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTVA-DVLAVER 248 PEGQ ADG +E+ +GW P DAIAD GR L+PPTW L LA A DVL R Sbjct 190 PEGQEADGATSEASSSGWQRPEDAIADAREGRRMLMPPTWLTLSELAKFATADDVLNAPR 249 Query 249 QIVPVQPQLARNGDNWEI 266 +IV + P L R D + Sbjct 250 EIVRIAPTLVRENDQVRV 267 >gi|54026261|ref|YP_120503.1| hypothetical protein nfa42900 [Nocardia farcinica IFM 10152] gi|54017769|dbj|BAD59139.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=279 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 141/274 (52%), Positives = 167/274 (61%), Gaps = 16/274 (5%) Query 2 NSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDD 61 NS P P P+ A+TVMLVRD SA G VFL RR M FAAG+ VFPGGGVD Sbjct 5 NSAGAPASQAPQPKDASTVMLVRD----SARGPEVFLQRRVGGMAFAAGMTVFPGGGVDP 60 Query 62 RDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHS 121 D AD+ AWAGP P WWA+RF +ALVCAA RETFEE GVL AGP Sbjct 61 SDATADI----AWAGPEPAWWARRFDTTEPRVKALVCAAVRETFEECGVLLAGPT----- 111 Query 122 APNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYD 181 +++V D + Y +AR L R LS A FL EKLVLR+DLLRPWANW+TP E RRYD Sbjct 112 -ADTVVGDTAAYREARGKLERRELSLAAFLAEEKLVLRADLLRPWANWITPVIE-PRRYD 169 Query 182 TYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TV 240 T FFV LP GQRADG +E+ W PA+ + + G + LLPPTW QLD+LA + Sbjct 170 TRFFVAVLPSGQRADGATSEAAEVHWRTPAEELDRWREGVDILLPPTWAQLDALAAFGST 229 Query 241 ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRY 274 A++LA E I P+ P LA ++ F D RY Sbjct 230 AEILAAEPVIEPIMPVLAPADGAQKLTFPDGARY 263 >gi|257057566|ref|YP_003135398.1| NUDIX family protein [Saccharomonospora viridis DSM 43017] gi|256587438|gb|ACU98571.1| NUDIX family protein [Saccharomonospora viridis DSM 43017] Length=281 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 136/255 (54%), Positives = 163/255 (64%), Gaps = 15/255 (5%) Query 15 RPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAW 74 + +ATV+LVRD + GS G+ VFL RR +M FAAG+ VFPGGGVD RD DA +G W Sbjct 40 KDSATVVLVRDVEDGS--GVEVFLQRRVRSMAFAAGMTVFPGGGVDQRDADASIG----W 93 Query 75 AGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYG 134 GPPP WA+ F LA ALVCA RE FEESGVL AG +S+V+D Y Sbjct 94 VGPPPAEWARWFSCSEPLARALVCAVVREAFEESGVLLAG-------TESSVVADTGAYA 146 Query 135 DARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEGQR 194 DAR AL LS A FL LVLR+DLLRPWANWVTPE E RRYD FFV ALPEGQ Sbjct 147 DARAALTSGELSLASFLAESGLVLRADLLRPWANWVTPEEE-PRRYDARFFVAALPEGQV 205 Query 195 ADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAG-HTVADVLAVERQIVPV 253 ADG TE + A W P DAIAD AGR L+PPTW L ++ +VA+VLA ER+I + Sbjct 206 ADGATTEVESAHWQRPEDAIADAEAGRVGLMPPTWCTLSEISRFSSVAEVLACERRIRRI 265 Query 254 QPQLARNGDNWEIEF 268 P+ ++G+ ++ Sbjct 266 MPRFVQDGERIVVKL 280 >gi|256374402|ref|YP_003098062.1| NUDIX hydrolase [Actinosynnema mirum DSM 43827] gi|255918705|gb|ACU34216.1| NUDIX hydrolase [Actinosynnema mirum DSM 43827] Length=279 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 138/244 (57%), Positives = 162/244 (67%), Gaps = 16/244 (6%) Query 15 RPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAW 74 R AA+V+LVRD + GL VFL RR M FA G+ VFPGGGVD RD D + W Sbjct 39 RDAASVLLVRDGE----RGLEVFLQRRVLGMAFAGGMTVFPGGGVDPRDADTSV----EW 90 Query 75 AGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYG 134 AGPPP WWA RFG ++A ALVCAA RETFEESGVL AGP + + +V+DAS Y Sbjct 91 AGPPPSWWAGRFGCGEEVARALVCAAVRETFEESGVLLAGP------SASEVVADASAYF 144 Query 135 DARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEGQR 194 RRAL R LS A FL +LVLR+DLLRPWANWVTP E RRYDT FF ALP+GQ Sbjct 145 AERRALERRELSLAAFLAGARLVLRADLLRPWANWVTP-VEEPRRYDTRFFTAALPDGQL 203 Query 195 ADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAG-HTVADVLAVERQIVPV 253 ADG +E+ A W P++AIAD+ GR LLPPTW L LA +VA+ LAVER++ V Sbjct 204 ADGVTSEASDAVWQRPSEAIADWEEGRRLLLPPTWVALADLAELGSVAEALAVEREVDRV 263 Query 254 QPQL 257 P+L Sbjct 264 IPKL 267 >gi|111023413|ref|YP_706385.1| hypothetical protein RHA1_ro06452 [Rhodococcus jostii RHA1] gi|110822943|gb|ABG98227.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=280 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 134/266 (51%), Positives = 174/266 (66%), Gaps = 13/266 (4%) Query 14 PRPAATVMLVRDPDAGSAS-GLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLG 72 P+ A+TV+L+RD A +A+ G+ VFL+RR M FA G+ VFPGGGVD D DA++ Sbjct 17 PKDASTVILIRDAAADAAAPGIEVFLLRRVKGMAFAGGMTVFPGGGVDPSDADAEVD--- 73 Query 73 AWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASV 132 WAGP WWA RF + A+ALVCAA RETFEE GVL AGP + +++V+D S Sbjct 74 -WAGPSVDWWAARFSTDAARAKALVCAAVRETFEECGVLLAGP------SADTVVADTSR 126 Query 133 YGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEG 192 Y +R L R LSF+DFL+RE LVLR+DLLRPWANW+TP E RRYDT FFV A P G Sbjct 127 YAQSRTQLEKRELSFSDFLKRENLVLRADLLRPWANWITPVGE-GRRYDTRFFVAAAPHG 185 Query 193 QRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TVADVLAVERQIV 251 Q ADG +E++ W PA A+A + G + LLPPTW+QL +L+ +VA+VLA E +I Sbjct 186 QIADGATSEAEEVRWQSPAAALAHWQGGGSILLPPTWSQLTALSAFGSVAEVLAAEPEIP 245 Query 252 PVQPQLARNGDNWEIEFFDSDRYNQA 277 + P L + + +EF D Y +A Sbjct 246 VILPTLITDEEQLRVEFPGQDGYYEA 271 >gi|226305850|ref|YP_002765810.1| hypothetical protein RER_23630 [Rhodococcus erythropolis PR4] gi|229493412|ref|ZP_04387201.1| nudix hydrolase [Rhodococcus erythropolis SK121] gi|226184967|dbj|BAH33071.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] gi|229319728|gb|EEN85560.1| nudix hydrolase [Rhodococcus erythropolis SK121] Length=272 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/267 (49%), Positives = 170/267 (64%), Gaps = 16/267 (5%) Query 12 PTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRL 71 P P+ A+TV+LVRD + SG+ +FL++R M FA G+ VFPGGGVD D A++ Sbjct 10 PEPKDASTVILVRDAE----SGIEIFLLQRVQGMAFAGGMTVFPGGGVDKSDATAEV--- 62 Query 72 GAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDAS 131 WAGP +WWA+RF + A+ALV AA RETFEE GVL AGP +++V+D + Sbjct 63 -EWAGPSVEWWAERFSTDVARAKALVLAAVRETFEECGVLLAGPT------ADTVVADTA 115 Query 132 VYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPE 191 Y R AL LSF+DFL++E LVLR+DLLRPWANW+TP E TRRYDT FFV A P Sbjct 116 GYAQDRVALEKHELSFSDFLKKENLVLRTDLLRPWANWITPVGE-TRRYDTRFFVAASPT 174 Query 192 GQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAG-HTVADVLAVERQI 250 GQ ADG +E+ W P DA+A + G + LLPPTW+QL LA +VA++LA E +I Sbjct 175 GQIADGVTSEAAEVRWQSPQDALAHWREGGSILLPPTWSQLTELAKFSSVAEILAAEPEI 234 Query 251 VPVQPQLARNGDNWEIEFFDSDRYNQA 277 + P L + + +EF + D Y A Sbjct 235 PVILPTLITDEETLRVEFPNQDGYYVA 261 >gi|326381496|ref|ZP_08203190.1| NUDIX hydrolase [Gordonia neofelifaecis NRRL B-59395] gi|326199743|gb|EGD56923.1| NUDIX hydrolase [Gordonia neofelifaecis NRRL B-59395] Length=275 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 126/265 (48%), Positives = 167/265 (64%), Gaps = 17/265 (6%) Query 11 PPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGR 70 P R A+TV+LVRD SA G+ VFL RR M FA G+ VFPGGGVD RDRDA++ Sbjct 9 PAPVRDASTVVLVRD----SADGIEVFLQRRVKQMAFAGGMTVFPGGGVDHRDRDAEI-- 62 Query 71 LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDA 130 AW GP QWWA RF + + A ALV AA RETFEE GVL AG D + P S+ + Sbjct 63 --AWVGPEVQWWADRFATDTESARALVSAAVRETFEECGVLLAGSADAVYPDPASLAGE- 119 Query 131 SVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALP 190 R L ++ +SFA FL L LR+DLL P ++W+TP+ E+ RRYDT FF+ LP Sbjct 120 ------RERLVNKEISFAQFLSEHDLALRADLLAPLSHWITPKNEV-RRYDTRFFLAELP 172 Query 191 EGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TVADVLAVERQ 249 +GQ ADGE +E+ W A A+AD+ G++FLLPPTW+QL +A + TVA++++ + + Sbjct 173 DGQAADGETSEAADTKWQTAAAALADWNEGKHFLLPPTWSQLRVIAANSTVAELMSADHR 232 Query 250 IVPVQPQLARNGDNWEIEFFDSDRY 274 I P++P +A + F DSD Y Sbjct 233 IEPIEPSIADASGLAGLRFADSDEY 257 >gi|296140607|ref|YP_003647850.1| NUDIX hydrolase [Tsukamurella paurometabola DSM 20162] gi|296028741|gb|ADG79511.1| NUDIX hydrolase [Tsukamurella paurometabola DSM 20162] Length=272 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 138/275 (51%), Positives = 170/275 (62%), Gaps = 17/275 (6%) Query 1 MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD 60 M+S + PP P+ AATV+LVRD + VFL RR M FA G+ VFPGGGVD Sbjct 1 MSSNVDTPTAPPHPKAAATVVLVRD----GVDEVEVFLQRRVQQMAFAGGMTVFPGGGVD 56 Query 61 DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH 120 RD + D+ AW GP P WWA+RFG A LVCAA RETFEE GVL A Sbjct 57 PRDAEIDI----AWQGPEPSWWAERFGTVESNARQLVCAAVRETFEECGVLLA------- 105 Query 121 SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 S P+ SDA+ AR AL R A+FL+ + LVLR+DLLRP A+W+TPE E RRY Sbjct 106 SEPDGASSDATALAPARAALEAREFGLAEFLREQNLVLRADLLRPLAHWITPENE-KRRY 164 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-T 239 DT FF+ ALP+GQ AD +E D A W + A+AD++ G+ FLLPPTW+QL S+A + T Sbjct 165 DTRFFLAALPDGQEADDRTSEVDEAYWRTASGALADWSDGKCFLLPPTWSQLRSVAAYGT 224 Query 240 VADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRY 274 VA++LA ER I PVQP L G + F D+ Y Sbjct 225 VAELLAAERTIEPVQPDLPPGGGIETLSFGDAAEY 259 >gi|72160519|ref|YP_288176.1| hypothetical protein Tfu_0115 [Thermobifida fusca YX] gi|71914251|gb|AAZ54153.1| conserved hypothetical protein [Thermobifida fusca YX] Length=310 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 129/256 (51%), Positives = 163/256 (64%), Gaps = 18/256 (7%) Query 9 VPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADL 68 V P PR AATV+LVR D GL V+L+RR A+M FA G+ FPGG VD RD D + Sbjct 55 VTPVRPRDAATVLLVRQAD----RGLEVYLLRRVASMRFAPGMYAFPGGSVDPRDSDHTI 110 Query 69 GRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVS 128 W+GPPP+ WA+ FG + LA ALVCAA RETFEESGVL AGP + N +V+ Sbjct 111 ----RWSGPPPREWARAFGADEALARALVCAAVRETFEESGVLLAGPSE------NEVVA 160 Query 129 DASV--YGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFV 186 D + + R+AL +R+LS A+ L R LVLRSDLL PWA W+TP E RRYDT FFV Sbjct 161 DTRGDDWEEDRQALLNRSLSLAELLDRRGLVLRSDLLCPWARWITPAME-PRRYDTRFFV 219 Query 187 GALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TVADVLA 245 LPEGQ+ E+D W+ P +A+ + AG+ +LPPT L SL G+ T +VLA Sbjct 220 AVLPEGQQPRDVGGEADHVTWMSPEEAVRQWRAGQLAMLPPTVANLKSLIGYATPEEVLA 279 Query 246 VERQIVPVQPQLARNG 261 ER+IVPVQP+ ++ Sbjct 280 AEREIVPVQPEFRKSA 295 >gi|262203164|ref|YP_003274372.1| NUDIX hydrolase [Gordonia bronchialis DSM 43247] gi|262086511|gb|ACY22479.1| NUDIX hydrolase [Gordonia bronchialis DSM 43247] Length=274 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 126/261 (49%), Positives = 163/261 (63%), Gaps = 18/261 (6%) Query 15 RPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAW 74 R AATV+L RD D G+ VFL RR M FA G+ VFPGGGVD RD DADL AW Sbjct 17 RDAATVVLARDSD----DGIEVFLQRRVKQMAFAGGMTVFPGGGVDPRDSDADL----AW 68 Query 75 AGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYG 134 GP P WWA +F +LA+ALVCAA RETFEE GVL A +D P+S+ +D Sbjct 69 TGPEPSWWAHQFSTSVELAQALVCAAVRETFEECGVLLAS-AGEDFPDPSSLRAD----- 122 Query 135 DARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEGQR 194 R AL D+++SFADFL+ +L LR+DLLRP A+W+TP E RRYDT FF+ A+P GQ Sbjct 123 --RDALVDKSISFADFLRARQLTLRADLLRPLAHWITPVNE-KRRYDTRFFLAAVPAGQE 179 Query 195 ADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TVADVLAVERQIVPV 253 D +E++ A W A+ ++AG++FLLPPTW QL +A TV ++LA +R I + Sbjct 180 PDDSTSEAEVARWAGAQGALDAWSAGKHFLLPPTWAQLTEVARFATVDELLAAQRTIEAI 239 Query 254 QPQLARNGDNWEIEFFDSDRY 274 +P ++ + F SD Y Sbjct 240 EPSVSAGKGLAGLAFQRSDDY 260 >gi|271962039|ref|YP_003336235.1| NUDIX hydrolase [Streptosporangium roseum DSM 43021] gi|270505214|gb|ACZ83492.1| NUDIX hydrolase [Streptosporangium roseum DSM 43021] Length=275 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 133/256 (52%), Positives = 163/256 (64%), Gaps = 26/256 (10%) Query 8 LVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDAD 67 LVP P R AATV+++R+ G+ V+L+RR A+M FAAG VFPGG VD RD D Sbjct 22 LVPVPA-RDAATVVILRE-------GVEVYLLRRKASMAFAAGAYVFPGGSVDPRDADHA 73 Query 68 LGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIV 127 + AWAGP P W F + +A LVCAA RETFEESGVL AGP +P S+V Sbjct 74 I----AWAGPSPAEWGAVFRADERIARGLVCAAVRETFEESGVLLAGP------SPESVV 123 Query 128 SDASVYGDA----RRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTY 183 +D + GD R AL DR+LSFADFL LVLRSDLLRPWA+W+TPE E RR+DT Sbjct 124 ADTT--GDDWEADRLALIDRSLSFADFLDGRGLVLRSDLLRPWAHWITPEVE-HRRFDTR 180 Query 184 FFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TVAD 242 FFV ALP GQR E+D+ W PADA+ G+ FL+PPT+ L L + TVA+ Sbjct 181 FFVAALPPGQRTRDVGGEADQVAWARPADAVDQAKNGQIFLMPPTYRTLGELRDYRTVAE 240 Query 243 VLAVERQIVPVQPQLA 258 VLA ER+IV + P +A Sbjct 241 VLAAEREIVSLMPGIA 256 >gi|343926892|ref|ZP_08766385.1| hypothetical protein GOALK_072_01140 [Gordonia alkanivorans NBRC 16433] gi|343763252|dbj|GAA13311.1| hypothetical protein GOALK_072_01140 [Gordonia alkanivorans NBRC 16433] Length=274 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 124/261 (48%), Positives = 161/261 (62%), Gaps = 17/261 (6%) Query 15 RPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAW 74 R AATV+LVRD SA G+ VFL RR M FA G+ VFPGGGVD RD A + AW Sbjct 16 RDAATVVLVRD----SADGIEVFLQRRVKQMAFAGGMTVFPGGGVDKRDAGAHV----AW 67 Query 75 AGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYG 134 GP WWA++F + +LA+ALVCAA RETFEE GVL A D + P ++ D Sbjct 68 TGPQAAWWAEQFNTDDELAQALVCAAVRETFEECGVLLATTADGSFADPGALADD----- 122 Query 135 DARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEGQR 194 R+ L +++LSFA+FL L LR+DLL P A+W+TP E RRYDT FF+ A+PEGQ+ Sbjct 123 --RQQLVEKSLSFAEFLTARGLTLRADLLSPLAHWITPVNE-KRRYDTRFFLAAMPEGQQ 179 Query 195 ADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TVADVLAVERQIVPV 253 AD E TE++ A WV AI +A G++FL+PPTW QL ++G +V ++LA ER + + Sbjct 180 ADAETTEAEVARWVNARVAIDAWAEGKHFLMPPTWAQLHYVSGFPSVDELLAAERSVECI 239 Query 254 QPQLARNGDNWEIEFFDSDRY 274 P + F SD Y Sbjct 240 LPNTTPGAGLAGLGFPGSDEY 260 >gi|296268195|ref|YP_003650827.1| NUDIX hydrolase [Thermobispora bispora DSM 43833] gi|296090982|gb|ADG86934.1| NUDIX hydrolase [Thermobispora bispora DSM 43833] Length=295 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 132/256 (52%), Positives = 157/256 (62%), Gaps = 27/256 (10%) Query 5 REPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDR 64 R P+VP R AATV+L+RD L FL+RR + FAAG VFPGG VD RD Sbjct 20 RAPVVPA---RDAATVVLLRD------DPLETFLLRRKQTLAFAAGAYVFPGGAVDPRDA 70 Query 65 DADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPN 124 D + AWAGP P WA+ + A LVCAA RETFEESGVL AGP Sbjct 71 DHAI----AWAGPSPAEWAEVLRTDERTARGLVCAAVRETFEESGVLLAGP------DTG 120 Query 125 SIVSDASVYGDA----RRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY 180 S+V+D S GD RRAL DRTLSFA+FL+R +LVLRSDLL+ WA+W+TPE E RRY Sbjct 121 SVVADTS--GDDWEADRRALVDRTLSFAEFLERRRLVLRSDLLKAWAHWITPEVE-PRRY 177 Query 181 DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAG-HT 239 DT FFV ALP GQR ESD W+ P A+A AAG L+PPT L +A T Sbjct 178 DTRFFVAALPAGQRTRDVGGESDGVVWMEPKTALARAAAGEMHLMPPTLRTLTEIAAFET 237 Query 240 VADVLAVERQIVPVQP 255 +++VLA ER+IV + P Sbjct 238 ISEVLAHEREIVTIMP 253 >gi|269129037|ref|YP_003302407.1| NUDIX hydrolase [Thermomonospora curvata DSM 43183] gi|268313995|gb|ACZ00370.1| NUDIX hydrolase [Thermomonospora curvata DSM 43183] Length=285 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 124/251 (50%), Positives = 156/251 (63%), Gaps = 21/251 (8%) Query 11 PPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGR 70 PP R AATV+++RD GL F++RR A+M FA G VFPGG VD RD +A +G Sbjct 28 PPPVRHAATVVVLRD---HPEQGLQAFMLRRVASMAFAPGAYVFPGGSVDPRDGEASIG- 83 Query 71 LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDA 130 W GP P+ W + FG + +A LVCAA RETFEE+ VL AGP + ++V D Sbjct 84 ---WVGPSPRQWGEAFGADETVARELVCAAVRETFEETQVLLAGPTAE------TVVDDT 134 Query 131 SVYGDA----RRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFV 186 GD R+AL DR+ S A+FL R L+LR+DLLRPW +W+TP E TRRYDT FFV Sbjct 135 R--GDDWEADRKALVDRSQSLAEFLNRRGLLLRADLLRPWGHWITPVVE-TRRYDTRFFV 191 Query 187 GALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TVADVLA 245 A+P GQRA +TE+D+ WV PA+A+ G LLPPT L LA + TVADVLA Sbjct 192 AAIPAGQRARDVSTEADKVAWVRPAEAVQRALRGEWALLPPTLATLSELAEYDTVADVLA 251 Query 246 VERQIVPVQPQ 256 ER I +P+ Sbjct 252 AERTISVREPR 262 >gi|319949158|ref|ZP_08023247.1| NUDIX superfamily hydrolase [Dietzia cinnamea P4] gi|319437144|gb|EFV92175.1| NUDIX superfamily hydrolase [Dietzia cinnamea P4] Length=271 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 133/273 (49%), Positives = 159/273 (59%), Gaps = 19/273 (6%) Query 13 TPRP---AATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLG 69 T RP A+TVM++RD DAG VF+ RR M FA G+ VFPGGGVD AD Sbjct 8 TARPVKDASTVMVIRDSDAGPE----VFVARRVKGMAFAGGMTVFPGGGVDA----ADDD 59 Query 70 RLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSD 129 AW GP P WWA+R G + A LVCAAARETFEE GVL A D AP VSD Sbjct 60 PDLAWTGPAPAWWAERLGCDEPRARRLVCAAARETFEECGVLLA---DHRDGAP---VSD 113 Query 130 ASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGAL 189 A Y AR L LSF+ FL RE+L L +D LRP+ +W+TP E RRYDT FF+ AL Sbjct 114 AGRYHAARTELEAHELSFSAFLAREELSLAADRLRPFDHWITPSVE-PRRYDTRFFLAAL 172 Query 190 PEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TVADVLAVER 248 P GQ D + TE D W P D +ADF AG + LLPPTWTQL L+ VA LA ER Sbjct 173 PVGQEPDDQTTEVDLTMWARPVDLLADFRAGHSMLLPPTWTQLRHLSEFPDVAAALAAER 232 Query 249 QIVPVQPQLARNGDNWEIEFFDSDRYNQARRSG 281 I P++P++ + + F SD Y ++G Sbjct 233 TISPIEPEIIEHRGGIRVGFDGSDEYWADHQAG 265 >gi|294630570|ref|ZP_06709130.1| NUDIX family hydrolase [Streptomyces sp. e14] gi|292833903|gb|EFF92252.1| NUDIX family hydrolase [Streptomyces sp. e14] Length=292 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/230 (52%), Positives = 143/230 (63%), Gaps = 18/230 (7%) Query 8 LVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDAD 67 L P P PR AATVML+RD + G AV ++RR A+M FAAG +PGGGVD RD D Sbjct 23 LTPVP-PRRAATVMLLRD----TGDGPAVHMLRRRASMAFAAGAYAYPGGGVDPRDDD-- 75 Query 68 LGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIV 127 R WAGP WWA R G++ A+A+VCAA RET+EE+GVL AGP P+S+V Sbjct 76 --RTIRWAGPTRAWWADRLGVDETTAQAIVCAAVRETYEEAGVLLAGP------GPDSVV 127 Query 128 SDASV--YGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFF 185 D + + R AL R LSFA+FL R L LRSDLL W W+TPE E RRYDT+FF Sbjct 128 GDTTGEDWEADRAALVARELSFAEFLDRRGLTLRSDLLGAWTRWITPEFE-PRRYDTWFF 186 Query 186 VGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSL 235 V ALPEGQR +TE+DR W+ P DA A + G ++PPT L L Sbjct 187 VAALPEGQRTRNASTEADRTVWIRPQDAAAGYDRGELVMMPPTIATLRQL 236 >gi|134096938|ref|YP_001102599.1| NUDIX hydrolase [Saccharopolyspora erythraea NRRL 2338] gi|133909561|emb|CAL99673.1| NUDIX hydrolase [Saccharopolyspora erythraea NRRL 2338] Length=202 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 107/195 (55%), Positives = 127/195 (66%), Gaps = 8/195 (4%) Query 73 AWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASV 132 AW GP PQWWA++ G +LA ALVCAA RETFEESGVL AG + P ++VSD + Sbjct 2 AWNGPSPQWWARQLGCTEELARALVCAAVRETFEESGVLLAG------ADPGTVVSDTAA 55 Query 133 YGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEG 192 + D R AL R LS A FL LVLRSDLLRPW+NWVTPEAE RRYDT FFV ALPEG Sbjct 56 FADVRAALVSRELSLAGFLAGAGLVLRSDLLRPWSNWVTPEAE-PRRYDTRFFVAALPEG 114 Query 193 QRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLA-GHTVADVLAVERQIV 251 QRAD +E+ A W P A+ D+ GR LLPPTW L +A +VA+ L+ ER + Sbjct 115 QRADAATSEASDAYWRTPRAALDDWRQGRCGLLPPTWVTLTEIAECGSVAEALSTERVLT 174 Query 252 PVQPQLARNGDNWEI 266 V P+LAR W + Sbjct 175 KVVPKLARRDGRWHV 189 >gi|337766877|emb|CCB75588.1| NUDIX hydrolase [Streptomyces cattleya NRRL 8057] Length=344 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 129/281 (46%), Positives = 163/281 (59%), Gaps = 25/281 (8%) Query 11 PPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGR 70 P PR AATV+L+RD + G + L+RR A+M F AG +PGGGVD RD R Sbjct 59 PVEPRRAATVLLLRD----APGGPQLHLLRRSASMAFGAGAYAYPGGGVDPRDE-----R 109 Query 71 LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDA 130 WAGP + W G++P A+A+VCAA RETFEESGVL AGP D S S+V+D Sbjct 110 PVRWAGPEREVWGGLLGLDPVSAQAVVCAAVRETFEESGVLLAGP---DAS---SVVADT 163 Query 131 SVYGDA----RRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFV 186 S GD RRAL R LSFADFL R LVLRSDLL PWA W+TPE E RRYDT+FF+ Sbjct 164 S--GDGWEADRRALVGRELSFADFLARRDLVLRSDLLGPWARWITPEFE-ERRYDTWFFL 220 Query 187 GALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TVADVLA 245 ALP GQR + E+DR W+ A+A + G ++PPT L +L + TVAD A Sbjct 221 AALPAGQRTRDVSGEADRVAWLSAGAAVAGYDRGELLMMPPTIATLRALLPYATVADAFA 280 Query 246 --VERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGST 284 R + PV + GD + + + + + GG+T Sbjct 281 SCAGRDMTPVLARAELVGDEVVLRWPGHEEFTRHVERGGAT 321 >gi|334563492|ref|ZP_08516483.1| NUDIX domain-containing protein [Corynebacterium bovis DSM 20582] Length=344 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 108/234 (47%), Positives = 140/234 (60%), Gaps = 17/234 (7%) Query 8 LVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDAD 67 L+ P PR A+TV+L+RD + SG V++ R + M F A + VFPGGGVD RD D Sbjct 53 LLGPVAPRHASTVILLRD----TLSGPEVYVQERASTMRFCADMTVFPGGGVDSRDLPGD 108 Query 68 LGRLGA------WAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHS 121 + G W GP WWA+R G PD++ ALVCAA RETFEE+G L AG Sbjct 109 VDGDGRDSPDIRWRGPDVDWWAERLGTTPDMSRALVCAAVRETFEETGTLLAG------H 162 Query 122 APNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYD 181 A +V++ + Y + R L + L+F DF+ R LVLR+DLLRPWANWVTPE E RYD Sbjct 163 AGGGVVAETAPYREERALLENHRLAFTDFMDRHDLVLRTDLLRPWANWVTPE-EQPIRYD 221 Query 182 TYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSL 235 T FFV LPEGQ G+ E+ GW P+ + + + + +L+PPTW QL L Sbjct 222 TAFFVARLPEGQDTSGDTREATSTGWFRPSTLLDGWRSRKIYLMPPTWAQLKLL 275 >gi|284028442|ref|YP_003378373.1| NUDIX hydrolase [Kribbella flavida DSM 17836] gi|283807735|gb|ADB29574.1| NUDIX hydrolase [Kribbella flavida DSM 17836] Length=272 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 126/260 (49%), Positives = 161/260 (62%), Gaps = 18/260 (6%) Query 11 PPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGR 70 P PRPA+TV+L+RD D G V+L+RR +M FAAG+ VFPGG VD D Sbjct 26 PVEPRPASTVILLRDGDGGPE----VYLLRRQRSMAFAAGMTVFPGGRVDPTDSTI---- 77 Query 71 LGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSI--VS 128 + +W+GPPP+W+ QR G + + A A V AA RETFEESGVL AGP SA + + Sbjct 78 VDSWSGPPPEWFGQRLGCDAETAAAYVAAAVRETFEESGVLLAGP-----SAETVVGDTT 132 Query 129 DASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGA 188 DA D R AL R L FADFL R LVLR+DLL PWA+W+TPE E +RYDT FFV A Sbjct 133 DADWEAD-RVALESRELGFADFLHRRGLVLRADLLGPWAHWITPEYE-PKRYDTRFFVAA 190 Query 189 LPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH-TVADVLAVE 247 LP GQ +ESD+ W+ PADA+A AG +LPPT+ L + +VA+ LA + Sbjct 191 LPAGQVTRDVTSESDQVAWLRPADAVAAVDAGEMLMLPPTYLCCRDLTAYGSVAEALAAD 250 Query 248 RQIVPVQPQLARNGDNWEIE 267 R+I P+ P + +GD +E Sbjct 251 REIRPILPTVRVDGDQAYLE 270 >gi|297159227|gb|ADI08939.1| hypothetical protein SBI_05819 [Streptomyces bingchenggensis BCW-1] Length=301 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 116/230 (51%), Positives = 143/230 (63%), Gaps = 21/230 (9%) Query 11 PPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGR 70 P TPR AATV+L+RD A G AV ++RR +M FAAG +PGG VD RD R Sbjct 27 PVTPRRAATVLLLRD----GAEGPAVHMLRRRTSMAFAAGAYAYPGGSVDPRDE-----R 77 Query 71 LGAWAGPPPQWWAQRFGIEPD---LAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIV 127 AWAGP + WA+R G+ D A+A+VCAA RETFEE+GVL AGP P+++V Sbjct 78 GMAWAGPSRREWARRLGLSADDETAAQAIVCAAVRETFEEAGVLLAGPT------PHTVV 131 Query 128 SDAS--VYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFF 185 +D + + R AL R LSFADFL R LVLRSDLL WA W+TPE E RRYDT+FF Sbjct 132 ADTTGEEWDADRAALVARELSFADFLDRRGLVLRSDLLGCWARWITPEFE-PRRYDTWFF 190 Query 186 VGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSL 235 V ALP GQR +TE+D W+ PA+A A + G ++PPT L L Sbjct 191 VAALPHGQRTRNASTEADHTVWIRPAEAAAGYDRGELLMMPPTIATLREL 240 >gi|345016223|ref|YP_004818577.1| NUDIX hydrolase [Streptomyces violaceusniger Tu 4113] gi|344042572|gb|AEM88297.1| NUDIX hydrolase [Streptomyces violaceusniger Tu 4113] Length=355 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 111/218 (51%), Positives = 137/218 (63%), Gaps = 21/218 (9%) Query 28 AGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAWAGPPPQWWAQRFG 87 AG A GLAV+++RR A+M FA G +PGG VD RD R+ WAGP WA+R G Sbjct 100 AGGADGLAVYMLRRRASMAFAGGAYAYPGGSVDPRDE-----RMVTWAGPSRAQWARRLG 154 Query 88 IEPD---LAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYGDA----RRAL 140 ++P A+A+VCAA RETFEE+GVL AGP P+++V+D + GD R AL Sbjct 155 LDPSEATQAQAIVCAAVRETFEEAGVLLAGPT------PHTVVADTT--GDDWEADRAAL 206 Query 141 ADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRYDTYFFVGALPEGQRADGENT 200 R LSFA+FL R LVLRSDLL WA W+TPE E RRYDT+FFV ALP GQR +T Sbjct 207 VARDLSFAEFLDRRGLVLRSDLLGCWARWITPEFE-PRRYDTWFFVAALPRGQRTRNAST 265 Query 201 ESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGH 238 E+DR W+ PADA + G ++PPT L LA H Sbjct 266 EADRTVWIRPADAADGYDRGELLMMPPTIATLRQLAAH 303 Lambda K H 0.319 0.136 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 467727525600 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40