BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3044 Length=359 Score E Sequences producing significant alignments: (Bits) Value gi|308232325|ref|ZP_07664057.1| Fe(III)-dicitrate-binding peripl... 718 0.0 gi|15610181|ref|NP_217560.1| FEIII-dicitrate-binding periplasmic... 718 0.0 gi|340628036|ref|YP_004746488.1| putative FeIII-dicitrate-bindin... 686 0.0 gi|15842608|ref|NP_337645.1| ABC transporter, periplasmic substr... 658 0.0 gi|339295881|gb|AEJ47992.1| ABC transporter, periplasmic substra... 657 0.0 gi|289759169|ref|ZP_06518547.1| Fe(III)-dicitrate-binding peripl... 600 1e-169 gi|240169550|ref|ZP_04748209.1| FEIII-dicitrate-binding periplas... 566 2e-159 gi|183981664|ref|YP_001849955.1| FEIII-dicitrate-binding peripla... 551 6e-155 gi|118617487|ref|YP_905819.1| FEIII-dicitrate-binding periplasmi... 548 7e-154 gi|15827928|ref|NP_302191.1| FeIII-dicitrate transporter lipopro... 540 2e-151 gi|342858111|ref|ZP_08714766.1| hypothetical protein MCOL_04536 ... 524 1e-146 gi|41409190|ref|NP_962026.1| hypothetical protein MAP3092 [Mycob... 517 1e-144 gi|336459263|gb|EGO38208.1| ABC-type Fe3+-hydroxamate transport ... 516 2e-144 gi|296171162|ref|ZP_06852610.1| iron(III) ABC superfamily ATP bi... 513 1e-143 gi|254776330|ref|ZP_05217846.1| hypothetical protein MaviaA2_169... 509 3e-142 gi|118463941|ref|YP_883072.1| periplasmic binding protein [Mycob... 506 2e-141 gi|8132043|gb|AAF73189.1|AF151098_1 FecB precursor [Mycobacteriu... 506 2e-141 gi|289571243|ref|ZP_06451470.1| Fe(III)-dicitrate-binding peripl... 476 3e-132 gi|254820791|ref|ZP_05225792.1| hypothetical protein MintA_12731... 444 2e-122 gi|333991413|ref|YP_004524027.1| FEIII-dicitrate-binding peripla... 420 2e-115 gi|120403073|ref|YP_952902.1| periplasmic binding protein [Mycob... 411 8e-113 gi|108798819|ref|YP_639016.1| periplasmic binding protein [Mycob... 404 1e-110 gi|126434420|ref|YP_001070111.1| periplasmic binding protein [My... 403 3e-110 gi|118471624|ref|YP_885437.1| periplasmic binding protein [Mycob... 389 3e-106 gi|315445188|ref|YP_004078067.1| ABC-type Fe3+-hydroxamate trans... 387 1e-105 gi|145224857|ref|YP_001135535.1| periplasmic binding protein [My... 383 2e-104 gi|169630471|ref|YP_001704120.1| FeIII-dicitrate-binding peripla... 362 5e-98 gi|226305842|ref|YP_002765802.1| ABC transporter substrate-bindi... 207 3e-51 gi|229493400|ref|ZP_04387189.1| periplasmic binding protein [Rho... 204 2e-50 gi|54026267|ref|YP_120509.1| putative transporter [Nocardia farc... 197 2e-48 gi|325675845|ref|ZP_08155529.1| iron(III) ABC superfamily ATP bi... 197 2e-48 gi|312140535|ref|YP_004007871.1| substrate-binding lipoprotein [... 197 3e-48 gi|226365906|ref|YP_002783689.1| ABC transporter substrate-bindi... 196 4e-48 gi|111023405|ref|YP_706377.1| iron ABC transporter substrate-bin... 196 6e-48 gi|291301003|ref|YP_003512281.1| periplasmic binding protein [St... 154 2e-35 gi|302866647|ref|YP_003835284.1| periplasmic binding protein [Mi... 153 4e-35 gi|271963321|ref|YP_003337517.1| hypothetical protein Sros_1784 ... 150 4e-34 gi|229492185|ref|ZP_04385994.1| periplasmic binding protein [Rho... 148 1e-33 gi|331695874|ref|YP_004332113.1| ABC transporter periplasmic sub... 145 7e-33 gi|296141788|ref|YP_003649031.1| periplasmic binding protein [Ts... 145 1e-32 gi|226303946|ref|YP_002763904.1| iron-siderophore binding protei... 145 1e-32 gi|260906070|ref|ZP_05914392.1| putative iron-siderophore uptake... 141 2e-31 gi|38233656|ref|NP_939423.1| putative iron-siderophore uptake sy... 139 5e-31 gi|108803262|ref|YP_643199.1| periplasmic binding protein [Rubro... 137 3e-30 gi|227502608|ref|ZP_03932657.1| ferric siderophore ABC superfami... 137 3e-30 gi|326381490|ref|ZP_08203184.1| periplasmic-binding protein [Gor... 135 8e-30 gi|306835175|ref|ZP_07468211.1| ferric siderophore ABC superfami... 135 1e-29 gi|343926899|ref|ZP_08766392.1| putative ABC transporter substra... 135 1e-29 gi|226363631|ref|YP_002781413.1| iron-siderophore binding protei... 132 1e-28 gi|16329185|ref|NP_439913.1| iron(III) dicitrate ABC transporter... 132 1e-28 >gi|308232325|ref|ZP_07664057.1| Fe(III)-dicitrate-binding periplasmic lipoprotein fecB [Mycobacterium tuberculosis SUMu001] gi|308369945|ref|ZP_07666829.1| Fe(III)-dicitrate-binding periplasmic lipoprotein fecB [Mycobacterium tuberculosis SUMu002] gi|308371220|ref|ZP_07667114.1| Fe(III)-dicitrate-binding periplasmic lipoprotein fecB [Mycobacterium tuberculosis SUMu003] 22 more sequence titles Length=364 Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/359 (100%), Positives = 359/359 (100%), Gaps = 0/359 (0%) Query 1 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA 60 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA Sbjct 6 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA 65 Query 61 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS 120 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS Sbjct 66 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS 125 Query 121 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT 180 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT Sbjct 126 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT 185 Query 181 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR 240 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR Sbjct 186 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR 245 Query 241 VYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCAS 300 VYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCAS Sbjct 246 VYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCAS 305 Query 301 EAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 EAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN Sbjct 306 EAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 364 >gi|15610181|ref|NP_217560.1| FEIII-dicitrate-binding periplasmic lipoprotein [Mycobacterium tuberculosis H37Rv] gi|31794222|ref|NP_856715.1| FEIII-dicitrate-binding periplasmic lipoprotein [Mycobacterium bovis AF2122/97] gi|121638928|ref|YP_979152.1| putative FeIII-dicitrate-binding periplasmic lipoprotein fecB [Mycobacterium bovis BCG str. Pasteur 1173P2] 45 more sequence titles Length=359 Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/359 (100%), Positives = 359/359 (100%), Gaps = 0/359 (0%) Query 1 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA 60 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA Sbjct 1 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA 60 Query 61 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS 120 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS Sbjct 61 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS 120 Query 121 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT 180 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT Sbjct 121 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT 180 Query 181 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR 240 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR Sbjct 181 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR 240 Query 241 VYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCAS 300 VYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCAS Sbjct 241 VYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCAS 300 Query 301 EAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 EAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN Sbjct 301 EAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 >gi|340628036|ref|YP_004746488.1| putative FeIII-dicitrate-binding periplasmic lipoprotein FECB [Mycobacterium canettii CIPT 140010059] gi|340006226|emb|CCC45400.1| putative FeIII-dicitrate-binding periplasmic lipoprotein FECB [Mycobacterium canettii CIPT 140010059] Length=347 Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/347 (99%), Positives = 344/347 (99%), Gaps = 0/347 (0%) Query 13 VIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPA 72 +IAASSGCGSDQPAHKAS+SMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPA Sbjct 1 MIAASSGCGSDQPAHKASRSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPA 60 Query 73 HNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTV 132 HNAAGVSPEMV VPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPN SSSQPSYLGTTV Sbjct 61 HNAAGVSPEMVAVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNGSSSQPSYLGTTV 120 Query 133 HDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLR 192 HDLPGVGTRSAPDL AIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLR Sbjct 121 HDLPGVGTRSAPDLGAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLR 180 Query 193 GVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVL 252 GVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR+YGANNFPASVL Sbjct 181 GVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRIYGANNFPASVL 240 Query 253 SAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILD 312 SAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILD Sbjct 241 SAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILD 300 Query 313 SDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 SDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN Sbjct 301 SDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 347 >gi|15842608|ref|NP_337645.1| ABC transporter, periplasmic substrate-binding protein [Mycobacterium tuberculosis CDC1551] gi|13882923|gb|AAK47459.1| ABC transporter, periplasmic substrate-binding protein [Mycobacterium tuberculosis CDC1551] gi|339299494|gb|AEJ51604.1| Fe(III)-dicitrate-binding periplasmic lipoprotein fecB [Mycobacterium tuberculosis CCDC5180] Length=327 Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/327 (100%), Positives = 327/327 (100%), Gaps = 0/327 (0%) Query 33 MITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRI 92 MITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRI Sbjct 1 MITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRI 60 Query 93 VVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAA 152 VVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAA Sbjct 61 VVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAA 120 Query 153 HPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAATARIAAVDALITGFA 212 HPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAATARIAAVDALITGFA Sbjct 121 HPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAATARIAAVDALITGFA 180 Query 213 EHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIE 272 EHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIE Sbjct 181 EHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIE 240 Query 273 IGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFVVND 332 IGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFVVND Sbjct 241 IGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFVVND 300 Query 333 QVWQTGEGMVAARGIVDDLRWVDAPIN 359 QVWQTGEGMVAARGIVDDLRWVDAPIN Sbjct 301 QVWQTGEGMVAARGIVDDLRWVDAPIN 327 >gi|339295881|gb|AEJ47992.1| ABC transporter, periplasmic substrate-binding protein [Mycobacterium tuberculosis CCDC5079] Length=327 Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/327 (99%), Positives = 326/327 (99%), Gaps = 0/327 (0%) Query 33 MITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRI 92 MITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRI Sbjct 1 MITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRI 60 Query 93 VVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAA 152 VVLSGDQLDALCALGLQSR VAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAA Sbjct 61 VVLSGDQLDALCALGLQSRTVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAA 120 Query 153 HPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAATARIAAVDALITGFA 212 HPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAATARIAAVDALITGFA Sbjct 121 HPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAATARIAAVDALITGFA 180 Query 213 EHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIE 272 EHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIE Sbjct 181 EHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIE 240 Query 273 IGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFVVND 332 IGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFVVND Sbjct 241 IGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFVVND 300 Query 333 QVWQTGEGMVAARGIVDDLRWVDAPIN 359 QVWQTGEGMVAARGIVDDLRWVDAPIN Sbjct 301 QVWQTGEGMVAARGIVDDLRWVDAPIN 327 >gi|289759169|ref|ZP_06518547.1| Fe(III)-dicitrate-binding periplasmic lipoprotein fecB [Mycobacterium tuberculosis T85] gi|289714733|gb|EFD78745.1| Fe(III)-dicitrate-binding periplasmic lipoprotein fecB [Mycobacterium tuberculosis T85] Length=304 Score = 600 bits (1546), Expect = 1e-169, Method: Compositional matrix adjust. Identities = 298/298 (100%), Positives = 298/298 (100%), Gaps = 0/298 (0%) Query 62 AADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSS 121 AADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSS Sbjct 7 AADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSS 66 Query 122 SSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTA 181 SSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTA Sbjct 67 SSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTA 126 Query 182 APGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRV 241 APGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRV Sbjct 127 APGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRV 186 Query 242 YGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASE 301 YGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASE Sbjct 187 YGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASE 246 Query 302 AAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 AAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN Sbjct 247 AAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 304 >gi|240169550|ref|ZP_04748209.1| FEIII-dicitrate-binding periplasmic lipoprotein FecB [Mycobacterium kansasii ATCC 12478] Length=364 Score = 566 bits (1458), Expect = 2e-159, Method: Compositional matrix adjust. Identities = 277/342 (81%), Positives = 307/342 (90%), Gaps = 0/342 (0%) Query 18 SGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAG 77 +GCG+DQ AS+SM+TPTTQIAGAGVLGN RKPDESCAR AAA DPGPPTR AHNAAG Sbjct 23 TGCGADQAPTAASRSMVTPTTQIAGAGVLGNARKPDESCAREAAATDPGPPTRQAHNAAG 82 Query 78 VSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPG 137 V+P++ QVPAE QRIVVLSGDQLDALCALGLQSR+V AALP+ SSSQPSYLG TVHDLPG Sbjct 83 VNPDVAQVPAEPQRIVVLSGDQLDALCALGLQSRVVGAALPDGSSSQPSYLGKTVHDLPG 142 Query 138 VGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAA 197 VGTR++PDLRA+AAA PDLILGS +TP LYPQLAAIAPTVFTAAPGA WE+NLRGVGAA Sbjct 143 VGTRNSPDLRAVAAARPDLILGSVAVTPNLYPQLAAIAPTVFTAAPGAAWEDNLRGVGAA 202 Query 198 TARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGV 257 TAR AAV+AL++ F + A +VG KHDATHFQASIVQLTA+TMRVYGA NFPASVLSAVGV Sbjct 203 TARSAAVEALLSAFTQRAREVGAKHDATHFQASIVQLTASTMRVYGARNFPASVLSAVGV 262 Query 258 DRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWR 317 DRP +QRFTDKAY+EIGTT ADLA+ DFSAADADIVY+SCAS A ERA ILDSD WR Sbjct 263 DRPAAQRFTDKAYLEIGTTDADLARGTDFSAADADIVYVSCASPKATERAWTILDSDSWR 322 Query 318 KLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 KLSANRDNRVFVV+D++WQTGEG+VAARGIVDDLRW++APIN Sbjct 323 KLSANRDNRVFVVDDEIWQTGEGLVAARGIVDDLRWINAPIN 364 >gi|183981664|ref|YP_001849955.1| FEIII-dicitrate-binding periplasmic lipoprotein FecB [Mycobacterium marinum M] gi|183174990|gb|ACC40100.1| FEIII-dicitrate-binding periplasmic lipoprotein FecB [Mycobacterium marinum M] Length=364 Score = 551 bits (1420), Expect = 6e-155, Method: Compositional matrix adjust. Identities = 276/355 (78%), Positives = 316/355 (90%), Gaps = 1/355 (0%) Query 5 VAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAAD 64 VAV+++ A++ S GCGS+QPA KAS+S+ TPTTQIAGAGVLGNDRK DESCAR AAA D Sbjct 11 VAVSLSVAIVMCS-GCGSNQPATKASRSVTTPTTQIAGAGVLGNDRKADESCAREAAAPD 69 Query 65 PGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQ 124 PGP TRPAHNAAGV+P++ Q+ AE QRIVVLSGDQLDALCALGLQSR+V AA P+ S+SQ Sbjct 70 PGPATRPAHNAAGVTPDVAQISAEPQRIVVLSGDQLDALCALGLQSRVVGAAFPDGSNSQ 129 Query 125 PSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPG 184 PSYLGT VHDLPGVG+R+APDL+AI AAHPDLILGS+ LTP LY QLAAIAPTVFTAAPG Sbjct 130 PSYLGTAVHDLPGVGSRTAPDLKAIDAAHPDLILGSEALTPNLYAQLAAIAPTVFTAAPG 189 Query 185 ADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGA 244 A WE+NLRGVGAATAR AAV+ L++GF + A QVGTKHDATHFQASIVQLT ++MR+YG+ Sbjct 190 AAWEDNLRGVGAATARSAAVEELLSGFTQRARQVGTKHDATHFQASIVQLTRDSMRIYGS 249 Query 245 NNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAA 304 NF ASVL+AVGVDRP SQRFTDK Y+E+GTT A+LAK PDFSAADADI+Y+SCAS AAA Sbjct 250 RNFAASVLAAVGVDRPASQRFTDKPYLEMGTTDAELAKGPDFSAADADIIYVSCASPAAA 309 Query 305 ERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 ERAA +LDS PWRKLSAN DNRV +VND++WQTGEG+VAARGIVDDLRWV+APIN Sbjct 310 ERAATVLDSGPWRKLSANHDNRVLIVNDEIWQTGEGLVAARGIVDDLRWVNAPIN 364 >gi|118617487|ref|YP_905819.1| FEIII-dicitrate-binding periplasmic lipoprotein FecB [Mycobacterium ulcerans Agy99] gi|118569597|gb|ABL04348.1| FEIII-dicitrate-binding periplasmic lipoprotein FecB [Mycobacterium ulcerans Agy99] Length=364 Score = 548 bits (1411), Expect = 7e-154, Method: Compositional matrix adjust. Identities = 274/355 (78%), Positives = 316/355 (90%), Gaps = 1/355 (0%) Query 5 VAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAAD 64 VAV+++ A++ S GCGS+QPA KAS+S+ TPTTQIAGAGVLGNDRK DESCAR AAA D Sbjct 11 VAVSLSVAIVVCS-GCGSNQPATKASRSVATPTTQIAGAGVLGNDRKADESCAREAAAPD 69 Query 65 PGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQ 124 PGP TRPAHNAAGV+P++ Q+ AE QRIVVLSGDQLDALCALGLQSR+V AA P+ S+SQ Sbjct 70 PGPATRPAHNAAGVTPDVAQISAEPQRIVVLSGDQLDALCALGLQSRVVGAAFPDGSNSQ 129 Query 125 PSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPG 184 PSYLGT VHDLPGVG+R+APDL+AI AAHPDLILGS+ LTP LY QLAAIAPTVFTAAPG Sbjct 130 PSYLGTAVHDLPGVGSRTAPDLKAIDAAHPDLILGSEALTPNLYAQLAAIAPTVFTAAPG 189 Query 185 ADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGA 244 A WE+NLRGVGAATAR AAV+ L++GF + A QVGTKHDATHFQASIVQLT ++MR+YG+ Sbjct 190 AAWEDNLRGVGAATARSAAVEELLSGFTQRARQVGTKHDATHFQASIVQLTRDSMRIYGS 249 Query 245 NNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAA 304 NF ASVL+AVGVDRP SQRFTDK Y+E+GTT A+LAK PDFSAADADI+Y+SCAS AAA Sbjct 250 RNFAASVLAAVGVDRPASQRFTDKPYLEMGTTDAELAKGPDFSAADADIIYVSCASPAAA 309 Query 305 ERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 ERAA +LDS PWRKLSAN D+RV ++ND++WQTGEG+VAARGIVDDLRWV+APIN Sbjct 310 ERAATVLDSGPWRKLSANHDSRVLIINDEIWQTGEGLVAARGIVDDLRWVNAPIN 364 >gi|15827928|ref|NP_302191.1| FeIII-dicitrate transporter lipoprotein [Mycobacterium leprae TN] gi|221230405|ref|YP_002503821.1| putative FeIII-dicitrate transporter lipoprotein [Mycobacterium leprae Br4923] gi|13093481|emb|CAC30682.1| putative FeIII-dicitrate transporter lipoprotein [Mycobacterium leprae] gi|219933512|emb|CAR71824.1| putative FeIII-dicitrate transporter lipoprotein [Mycobacterium leprae Br4923] Length=364 Score = 540 bits (1390), Expect = 2e-151, Method: Compositional matrix adjust. Identities = 262/346 (76%), Positives = 295/346 (86%), Gaps = 4/346 (1%) Query 18 SGCGSDQPAHKAS---QSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHN 74 SGCGS QP K S +S++TPTTQIAGA V+GN+R+PD++CA A DPGPPTRPAHN Sbjct 19 SGCGSGQPGSKPSSPTRSLLTPTTQIAGATVIGNERRPDQACAPEPATVDPGPPTRPAHN 78 Query 75 AAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHD 134 AGV P++VQVPAEAQRIVVL+GDQLDALCALGLQ R+ AAALPN S SQPSYLG TVH Sbjct 79 VAGVKPDVVQVPAEAQRIVVLAGDQLDALCALGLQYRVAAAALPNDSVSQPSYLGKTVHG 138 Query 135 LPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAA-PGADWENNLRG 193 LPGVGTR APDL AIAA PDLILGSQ LTPQLYPQL AIAPTVFTAA PGA WE+NLRG Sbjct 139 LPGVGTRRAPDLSAIAATQPDLILGSQELTPQLYPQLTAIAPTVFTAAAPGATWEDNLRG 198 Query 194 VGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLS 253 VGAATAR AV+ LI GF++ ATQ+G HDATH+Q SIVQLT NTMRVYG+NNFPA VL+ Sbjct 199 VGAATARNDAVETLINGFSQRATQIGATHDATHYQVSIVQLTTNTMRVYGSNNFPARVLT 258 Query 254 AVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDS 313 AVGVDRP SQRFTD+AYI+ G T ADLAK PDFSA DADI+Y+SC S A A+RAA +LDS Sbjct 259 AVGVDRPTSQRFTDQAYIQSGITDADLAKEPDFSAVDADIIYVSCTSPAVAKRAATVLDS 318 Query 314 DPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 PWRKLSAN DNR+F+VND+VWQTGEG++AARGIVDDLRW++APIN Sbjct 319 GPWRKLSANHDNRIFIVNDEVWQTGEGLIAARGIVDDLRWINAPIN 364 >gi|342858111|ref|ZP_08714766.1| hypothetical protein MCOL_04536 [Mycobacterium colombiense CECT 3035] gi|342133815|gb|EGT86995.1| hypothetical protein MCOL_04536 [Mycobacterium colombiense CECT 3035] Length=368 Score = 524 bits (1349), Expect = 1e-146, Method: Compositional matrix adjust. Identities = 265/353 (76%), Positives = 303/353 (86%), Gaps = 1/353 (0%) Query 8 AVAAAVIAASSGCGSDQPAHKA-SQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPG 66 AV A ++ ASSGCGSD+PA + ++ +ITPTTQIAGAGVLGNDR+PD+SCAR AA AD G Sbjct 16 AVTATLVLASSGCGSDKPAGQPPARPLITPTTQIAGAGVLGNDRRPDDSCARDAAEADAG 75 Query 67 PPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPS 126 R HNAAGV+P++VQVPA+ QRIVVLSGDQLD LCALGLQSR+V AALP+ SSSQP Sbjct 76 SAKRQVHNAAGVNPDVVQVPADPQRIVVLSGDQLDTLCALGLQSRVVGAALPDGSSSQPD 135 Query 127 YLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGAD 186 YLG VH LPGVGTRS PDL+AIA AHPDLILGSQGLTP LYPQL AIAPTVFTAAPGA Sbjct 136 YLGGAVHGLPGVGTRSHPDLKAIAGAHPDLILGSQGLTPTLYPQLTAIAPTVFTAAPGAA 195 Query 187 WENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANN 246 W++NLR VGAAT R AAVD LI+GF++ T +G +HDA+H+QASIVQLT T+RV+GANN Sbjct 196 WQDNLRAVGAATGRTAAVDGLISGFSQRTTDIGARHDASHYQASIVQLTTGTIRVFGANN 255 Query 247 FPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAER 306 FPASVL AVGVDRP SQRFTDK YIEI ADLAK+PD S ADAD+VY+SCAS AAA+R Sbjct 256 FPASVLGAVGVDRPASQRFTDKPYIEIAAGDADLAKNPDLSIADADVVYVSCASPAAADR 315 Query 307 AAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 AA ILDS+PWRKLSANRDNRV+VVND++WQTGEG++AARGIVDDLR V+APIN Sbjct 316 AATILDSNPWRKLSANRDNRVYVVNDEIWQTGEGLIAARGIVDDLRLVNAPIN 368 >gi|41409190|ref|NP_962026.1| hypothetical protein MAP3092 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398010|gb|AAS05640.1| FecB [Mycobacterium avium subsp. paratuberculosis K-10] Length=364 Score = 517 bits (1331), Expect = 1e-144, Method: Compositional matrix adjust. Identities = 259/359 (73%), Positives = 302/359 (85%), Gaps = 0/359 (0%) Query 1 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA 60 +R AV AA++ A GCGSD+PA ++S++TPTTQIAGAGVLGNDR+PDESCAR A Sbjct 6 IRPARLAAVTAALMVACGGCGSDRPAATTTRSLVTPTTQIAGAGVLGNDRRPDESCARDA 65 Query 61 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS 120 A ADPGP R HNA G P VQV A+ QRIVVL+GDQLDALCALGLQSR+V AALP+ Sbjct 66 AEADPGPAKRQVHNAPGADPAPVQVSADPQRIVVLAGDQLDALCALGLQSRVVGAALPDG 125 Query 121 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT 180 +S QP+YLG V +PGVG+RS PD++AIAAAHPDLILGSQGLTP LYPQLAAIAPTVFT Sbjct 126 ASGQPAYLGGAVRGVPGVGSRSHPDVKAIAAAHPDLILGSQGLTPALYPQLAAIAPTVFT 185 Query 181 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR 240 AAPGA W +NLR VGAATAR AVD L++GF++ A VG +HDA+HFQASIVQLT ++R Sbjct 186 AAPGAAWRDNLRAVGAATARAGAVDGLLSGFSQRAGDVGARHDASHFQASIVQLTTGSIR 245 Query 241 VYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCAS 300 V+GANNFPASVL AVGVDRP +QRFTDK Y+EIG T ADLAK+PD S ADAD+VYLSCA+ Sbjct 246 VFGANNFPASVLGAVGVDRPAAQRFTDKPYLEIGATDADLAKNPDLSVADADVVYLSCAT 305 Query 301 EAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 AAA+RAA +LDS PWRKLSANRDNRV+VVND++WQTG+G++AARGIVDDLR V+APIN Sbjct 306 PAAADRAATVLDSGPWRKLSANRDNRVYVVNDEIWQTGQGLIAARGIVDDLRLVNAPIN 364 >gi|336459263|gb|EGO38208.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component [Mycobacterium avium subsp. paratuberculosis S397] Length=360 Score = 516 bits (1330), Expect = 2e-144, Method: Compositional matrix adjust. Identities = 259/359 (73%), Positives = 302/359 (85%), Gaps = 0/359 (0%) Query 1 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA 60 +R AV AA++ A GCGSD+PA ++S++TPTTQIAGAGVLGNDR+PDESCAR A Sbjct 2 IRPARLAAVTAALMVACGGCGSDRPAATTTRSLVTPTTQIAGAGVLGNDRRPDESCARDA 61 Query 61 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS 120 A ADPGP R HNA G P VQV A+ QRIVVL+GDQLDALCALGLQSR+V AALP+ Sbjct 62 AEADPGPAKRQVHNAPGADPAPVQVSADPQRIVVLAGDQLDALCALGLQSRVVGAALPDG 121 Query 121 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT 180 +S QP+YLG V +PGVG+RS PD++AIAAAHPDLILGSQGLTP LYPQLAAIAPTVFT Sbjct 122 ASGQPAYLGGAVRGVPGVGSRSHPDVKAIAAAHPDLILGSQGLTPALYPQLAAIAPTVFT 181 Query 181 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR 240 AAPGA W +NLR VGAATAR AVD L++GF++ A VG +HDA+HFQASIVQLT ++R Sbjct 182 AAPGAAWRDNLRAVGAATARAGAVDGLLSGFSQRAGDVGARHDASHFQASIVQLTTGSIR 241 Query 241 VYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCAS 300 V+GANNFPASVL AVGVDRP +QRFTDK Y+EIG T ADLAK+PD S ADAD+VYLSCA+ Sbjct 242 VFGANNFPASVLGAVGVDRPAAQRFTDKPYLEIGATDADLAKNPDLSVADADVVYLSCAT 301 Query 301 EAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 AAA+RAA +LDS PWRKLSANRDNRV+VVND++WQTG+G++AARGIVDDLR V+APIN Sbjct 302 PAAADRAATVLDSGPWRKLSANRDNRVYVVNDEIWQTGQGLIAARGIVDDLRLVNAPIN 360 >gi|296171162|ref|ZP_06852610.1| iron(III) ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894298|gb|EFG74053.1| iron(III) ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=368 Score = 513 bits (1322), Expect = 1e-143, Method: Compositional matrix adjust. Identities = 271/343 (80%), Positives = 306/343 (90%), Gaps = 1/343 (0%) Query 18 SGCGSDQPAHK-ASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAA 76 SGCGS +P K A+ S++TPTTQIAGAGVLGNDR PDESCAR AAAADPGP TR AHNAA Sbjct 26 SGCGSGKPGAKSATPSLVTPTTQIAGAGVLGNDRHPDESCAREAAAADPGPKTRQAHNAA 85 Query 77 GVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLP 136 GV+P++VQVPAE QRIVVLSGDQLDALCALGLQSR+V AALP+ SSSQP+YLG+ VH +P Sbjct 86 GVTPDVVQVPAEPQRIVVLSGDQLDALCALGLQSRVVGAALPDGSSSQPAYLGSAVHGVP 145 Query 137 GVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGA 196 GVGTRS PD+ AIAA+HPDLILGSQGLTP LYPQL AIAPTVFTAAPGA W++NLRGVGA Sbjct 146 GVGTRSKPDVTAIAASHPDLILGSQGLTPALYPQLDAIAPTVFTAAPGAAWQDNLRGVGA 205 Query 197 ATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVG 256 ATAR AA DAL+ GF++ A +G +HDA+HFQASIVQLT +T+RVYGANNFPASVL AVG Sbjct 206 ATARGAAADALLNGFSQRAGDIGARHDASHFQASIVQLTTDTIRVYGANNFPASVLGAVG 265 Query 257 VDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPW 316 VDRP SQRFTDK Y+EIG T ADLAK+PD SAADAD+VYLSCAS AAA+RAA +LDS+PW Sbjct 266 VDRPASQRFTDKPYLEIGATDADLAKNPDLSAADADVVYLSCASPAAAQRAATVLDSNPW 325 Query 317 RKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 RKLSAN DNRV+VVND+VWQTGEG++AARGIVDDLR V+APIN Sbjct 326 RKLSANHDNRVYVVNDEVWQTGEGLIAARGIVDDLRLVNAPIN 368 >gi|254776330|ref|ZP_05217846.1| hypothetical protein MaviaA2_16912 [Mycobacterium avium subsp. avium ATCC 25291] Length=364 Score = 509 bits (1310), Expect = 3e-142, Method: Compositional matrix adjust. Identities = 253/341 (75%), Positives = 293/341 (86%), Gaps = 0/341 (0%) Query 19 GCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGV 78 GCGSD+P ++S++TPTTQIAGAGVLGNDR+PDESCAR AA ADPGP R HNAAG Sbjct 24 GCGSDRPTATTTRSLVTPTTQIAGAGVLGNDRRPDESCARDAAEADPGPAKRQVHNAAGG 83 Query 79 SPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGV 138 P VQV A+ QRIVVL+GDQLDALCALGLQSR+V AALP+ +S QP+YLG V +PGV Sbjct 84 DPAPVQVSADPQRIVVLAGDQLDALCALGLQSRVVGAALPDGASGQPAYLGGAVRGVPGV 143 Query 139 GTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAAT 198 G+RS PD++AIAAAHPDLILGSQGLTP LYPQLAAIAPTVFTAAPGA W +NLR VGAAT Sbjct 144 GSRSHPDVKAIAAAHPDLILGSQGLTPALYPQLAAIAPTVFTAAPGAAWRDNLRAVGAAT 203 Query 199 ARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVD 258 AR AVD L++GF++ A VG +HDA+HFQASIVQLT ++RV+GANNFPASVL AVGVD Sbjct 204 ARAGAVDGLLSGFSQRAGDVGARHDASHFQASIVQLTTGSIRVFGANNFPASVLGAVGVD 263 Query 259 RPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRK 318 RP +QRFTDK Y+EIG T ADLAK+PD S ADAD+VYLSCA+ AAA+RAA +LDS PWRK Sbjct 264 RPAAQRFTDKPYLEIGATDADLAKNPDLSVADADVVYLSCATPAAADRAATVLDSGPWRK 323 Query 319 LSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 LSANRDNRV+VVND++WQTG+G++AARGIVDDLR V+APIN Sbjct 324 LSANRDNRVYVVNDEIWQTGQGLIAARGIVDDLRLVNAPIN 364 >gi|118463941|ref|YP_883072.1| periplasmic binding protein [Mycobacterium avium 104] gi|118165228|gb|ABK66125.1| Periplasmic binding protein [Mycobacterium avium 104] Length=360 Score = 506 bits (1304), Expect = 2e-141, Method: Compositional matrix adjust. Identities = 252/341 (74%), Positives = 293/341 (86%), Gaps = 0/341 (0%) Query 19 GCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGV 78 GCGSD+PA ++S++TPTTQIAGAGVLGNDR+PDESCAR AA ADPGP R HNA G Sbjct 20 GCGSDRPAATTTRSLVTPTTQIAGAGVLGNDRRPDESCARDAAEADPGPAKRQVHNAPGG 79 Query 79 SPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGV 138 P VQV A+ +RIVVL+GDQLDALCALGLQSR+V AALP+ +S QP+YLG V +PGV Sbjct 80 DPAPVQVSADPRRIVVLAGDQLDALCALGLQSRVVGAALPDGASGQPAYLGGAVRGVPGV 139 Query 139 GTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAAT 198 G+RS PD++AIAAAHPDLILGSQGLTP LYPQLAAIAPTVFTAAPGA W +NLR VGAAT Sbjct 140 GSRSHPDVKAIAAAHPDLILGSQGLTPALYPQLAAIAPTVFTAAPGAAWRDNLRAVGAAT 199 Query 199 ARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVD 258 AR AVD L++GF++ A VG +HDA+HFQASIVQLT ++RV+GANNFPASVL AVGVD Sbjct 200 ARAGAVDGLLSGFSQRAGDVGARHDASHFQASIVQLTTGSIRVFGANNFPASVLGAVGVD 259 Query 259 RPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRK 318 RP +QRFTDK Y+EIG T ADLAK+PD S ADAD+VYLSCA+ AAA+RAA +LDS PWRK Sbjct 260 RPAAQRFTDKPYLEIGATDADLAKNPDLSVADADVVYLSCATPAAADRAATVLDSGPWRK 319 Query 319 LSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 LSANRDNRV+VVND++WQTG+G++AARGIVDDLR V+APIN Sbjct 320 LSANRDNRVYVVNDEIWQTGQGLIAARGIVDDLRLVNAPIN 360 >gi|8132043|gb|AAF73189.1|AF151098_1 FecB precursor [Mycobacterium avium] Length=364 Score = 506 bits (1304), Expect = 2e-141, Method: Compositional matrix adjust. Identities = 252/341 (74%), Positives = 293/341 (86%), Gaps = 0/341 (0%) Query 19 GCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGV 78 GCGSD+PA ++S++TPTTQIAGAGVLGNDR+PDESCAR AA ADPGP R HNA G Sbjct 24 GCGSDRPAATTTRSLVTPTTQIAGAGVLGNDRRPDESCARDAAEADPGPAKRQVHNAPGG 83 Query 79 SPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGV 138 P VQV A+ +RIVVL+GDQLDALCALGLQSR+V AALP+ +S QP+YLG V +PGV Sbjct 84 DPAPVQVSADPRRIVVLAGDQLDALCALGLQSRVVGAALPDGASGQPAYLGGAVRGVPGV 143 Query 139 GTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAAT 198 G+RS PD++AIAAAHPDLILGSQGLTP LYPQLAAIAPTVFTAAPGA W +NLR VGAAT Sbjct 144 GSRSHPDVKAIAAAHPDLILGSQGLTPALYPQLAAIAPTVFTAAPGAAWRDNLRAVGAAT 203 Query 199 ARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVD 258 AR AVD L++GF++ A VG +HDA+HFQASIVQLT ++RV+GANNFPASVL AVGVD Sbjct 204 ARAGAVDGLLSGFSQRAGDVGARHDASHFQASIVQLTTGSIRVFGANNFPASVLGAVGVD 263 Query 259 RPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRK 318 RP +QRFTDK Y+EIG T ADLAK+PD S ADAD+VYLSCA+ AAA+RAA +LDS PWRK Sbjct 264 RPAAQRFTDKPYLEIGATDADLAKNPDLSVADADVVYLSCATPAAADRAATVLDSGPWRK 323 Query 319 LSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 LSANRDNRV+VVND++WQTG+G++AARGIVDDLR V+APIN Sbjct 324 LSANRDNRVYVVNDEIWQTGQGLIAARGIVDDLRLVNAPIN 364 >gi|289571243|ref|ZP_06451470.1| Fe(III)-dicitrate-binding periplasmic lipoprotein fecB [Mycobacterium tuberculosis T17] gi|289544997|gb|EFD48645.1| Fe(III)-dicitrate-binding periplasmic lipoprotein fecB [Mycobacterium tuberculosis T17] Length=316 Score = 476 bits (1224), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 241/241 (100%), Positives = 241/241 (100%), Gaps = 0/241 (0%) Query 1 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA 60 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA Sbjct 6 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA 65 Query 61 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS 120 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS Sbjct 66 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS 125 Query 121 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT 180 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT Sbjct 126 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT 185 Query 181 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR 240 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR Sbjct 186 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR 245 Query 241 V 241 V Sbjct 246 V 246 >gi|254820791|ref|ZP_05225792.1| hypothetical protein MintA_12731 [Mycobacterium intracellulare ATCC 13950] Length=306 Score = 444 bits (1141), Expect = 2e-122, Method: Compositional matrix adjust. Identities = 229/306 (75%), Positives = 261/306 (86%), Gaps = 0/306 (0%) Query 54 ESCARAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIV 113 +SCAR AA AD G R HNAAGV P++VQVPA+ QRIVVLSGDQLDALCALGLQSR+V Sbjct 1 DSCAREAAEADAGAAKRRVHNAAGVEPDVVQVPADPQRIVVLSGDQLDALCALGLQSRVV 60 Query 114 AAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAA 173 AAALP+ S +QP+YLG VH +PG GTRS PD++AI AAHPDLILGSQGLTP LYPQLAA Sbjct 61 AAALPDGSPTQPAYLGGAVHGVPGAGTRSHPDVKAIEAAHPDLILGSQGLTPTLYPQLAA 120 Query 174 IAPTVFTAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQ 233 IAPTVFT APGA WE+NLR VGAATAR +D L+ GFA+ AT VG +HDA+HFQASIV+ Sbjct 121 IAPTVFTGAPGAGWEDNLRAVGAATARGTEMDGLLGGFAKRATDVGARHDASHFQASIVR 180 Query 234 LTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADI 293 LT +RVYGANNFPASVL +VGVDRP +QRFTDK Y+EIG T ADLAK PD S ADAD+ Sbjct 181 LTTEAIRVYGANNFPASVLGSVGVDRPATQRFTDKPYVEIGATDADLAKDPDLSIADADV 240 Query 294 VYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRW 353 VYLSCA+ AAA+RAA +LDS PWRKLSANRDNRV+VVND++WQTGEG++AARGIVDDLR Sbjct 241 VYLSCATPAAADRAATVLDSGPWRKLSANRDNRVYVVNDEIWQTGEGLIAARGIVDDLRL 300 Query 354 VDAPIN 359 V+APIN Sbjct 301 VNAPIN 306 >gi|333991413|ref|YP_004524027.1| FEIII-dicitrate-binding periplasmic lipoprotein FecB [Mycobacterium sp. JDM601] gi|333487382|gb|AEF36774.1| FEIII-dicitrate-binding periplasmic lipoprotein FecB [Mycobacterium sp. JDM601] Length=358 Score = 420 bits (1079), Expect = 2e-115, Method: Compositional matrix adjust. Identities = 217/321 (68%), Positives = 251/321 (79%), Gaps = 1/321 (0%) Query 39 QIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGD 98 +AGAGVLGNDR+PDESCA A ADPGP R HNA GV P V+VP E +RIVVLSGD Sbjct 39 MVAGAGVLGNDRRPDESCAPEPARADPGPAMRSVHNAPGVEPPGVEVPEEPERIVVLSGD 98 Query 99 QLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLIL 158 QLDALCALGLQSR+V AALP+ S +QPSYLG +H LP VG+RS PD+ AIAA HPDLIL Sbjct 99 QLDALCALGLQSRVVGAALPDDSENQPSYLGAVMHGLPAVGSRSTPDIDAIAALHPDLIL 158 Query 159 GSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQV 218 G+QGLTP Y +LA+IAPTVFT APGA WE+NLRGVGAATAR A D ++ F A + Sbjct 159 GAQGLTPG-YSELASIAPTVFTGAPGAAWEDNLRGVGAATARSGATDVVLDKFGRAAAET 217 Query 219 GTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAA 278 G DATHFQAS+V LT +RVYGA NF ASVL AVGVDRPPSQRFTD+ Y+EI + A Sbjct 218 GEAADATHFQASVVALTDAGVRVYGAANFAASVLKAVGVDRPPSQRFTDQPYVEIAASDA 277 Query 279 DLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTG 338 DLA D SAAD DIVY+S AS AA RAA + DS WR+L+ANRD+RVFVVN++VWQTG Sbjct 278 DLAGRADLSAADGDIVYVSFASTAAKARAAAVFDSVSWRRLAANRDSRVFVVNNEVWQTG 337 Query 339 EGMVAARGIVDDLRWVDAPIN 359 +G +AA G+VDDLRW++APIN Sbjct 338 QGPIAALGVVDDLRWLNAPIN 358 >gi|120403073|ref|YP_952902.1| periplasmic binding protein [Mycobacterium vanbaalenii PYR-1] gi|119955891|gb|ABM12896.1| periplasmic binding protein [Mycobacterium vanbaalenii PYR-1] Length=380 Score = 411 bits (1057), Expect = 8e-113, Method: Compositional matrix adjust. Identities = 220/353 (63%), Positives = 259/353 (74%), Gaps = 14/353 (3%) Query 18 SGCGS------DQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRP 71 +GCGS D P +A + T TT+IA AGVLGNDR+PDESCA A D GPP R Sbjct 31 TGCGSSGNDTADGPGQRAVE---TSTTRIASAGVLGNDRRPDESCAPEPARLDDGPPDRE 87 Query 72 AHNAAGVS-----PEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPS 126 NA G PE+ QV A+ QRIVVLSGD LDALCALGLQSRIV AALP S +QP+ Sbjct 88 VRNATGHGVSPPIPELTQVRADPQRIVVLSGDHLDALCALGLQSRIVGAALPEGSDAQPA 147 Query 127 YLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGAD 186 YLGT +H+LPG G+R+ PDL AI AA PDLILGS LTPQ +P+LAAIAPTVFT G+ Sbjct 148 YLGTVIHELPGAGSRTDPDLDAIRAAQPDLILGSVALTPQDHPELAAIAPTVFTGPAGSA 207 Query 187 WENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANN 246 W +NLR VGAAT R AA D LI F A + G +DA HFQAS+VQ T TMRV+G ++ Sbjct 208 WRDNLRTVGAATGRAAAADGLIEDFDRAADRTGLDNDAAHFQASVVQFTDTTMRVFGPDS 267 Query 247 FPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAER 306 FP SVL+AVGVDRP +QRFTDK Y+E+G + DL SPDFS AD D+VY+S A+ A ER Sbjct 268 FPGSVLAAVGVDRPAAQRFTDKPYVEVGISDEDLGNSPDFSIADGDLVYVSFATAEARER 327 Query 307 AAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 A +LDSD WR+LSANRD RVF VN++VWQTGEG+VAARG++ DLRWV+APIN Sbjct 328 APKVLDSDAWRRLSANRDGRVFAVNNEVWQTGEGIVAARGMLADLRWVNAPIN 380 >gi|108798819|ref|YP_639016.1| periplasmic binding protein [Mycobacterium sp. MCS] gi|119867936|ref|YP_937888.1| periplasmic binding protein [Mycobacterium sp. KMS] gi|108769238|gb|ABG07960.1| periplasmic binding protein [Mycobacterium sp. MCS] gi|119694025|gb|ABL91098.1| periplasmic binding protein [Mycobacterium sp. KMS] Length=353 Score = 404 bits (1038), Expect = 1e-110, Method: Compositional matrix adjust. Identities = 221/362 (62%), Positives = 269/362 (75%), Gaps = 12/362 (3%) Query 1 MRSTVAVAVAAAVIAASSGCGS---DQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCA 57 M +TV+ + AA++AA +GCGS D A S+IT TT +AGAGVLGN R+PDESCA Sbjct 1 MGTTVSATLVAALVAALAGCGSTDADPAASALMSSVITSTTSVAGAGVLGNQRRPDESCA 60 Query 58 RAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAAL 117 A DPGPP R +AAG + +V A+ +RIVVLSGDQLDALCALGLQSRIVAAAL Sbjct 61 AGPAPVDPGPPEREVRHAAGET----RVTADPRRIVVLSGDQLDALCALGLQSRIVAAAL 116 Query 118 PNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPT 177 P+ QPSYLG+ +HD+ GTRSAPD+ AI AA PDLILGSQ LTP+L+ L IAPT Sbjct 117 PDGRDEQPSYLGSVIHDVAPAGTRSAPDVDAIRAAAPDLILGSQALTPELFDALGQIAPT 176 Query 178 VFTAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTAN 237 VFT PGADW+ NLR VGAAT R A L+ GFA+ A + G +DA H+Q S+VQLT + Sbjct 177 VFTGPPGADWQANLRTVGAATGRFDATGGLLDGFADAARRTGLDNDAAHYQVSVVQLTED 236 Query 238 TMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLS 297 T+RVYGA NF SVL+ VG+DRP +QRFTD+ ++EIGT SPD+ ADADIVY+S Sbjct 237 TVRVYGARNFAGSVLAEVGLDRPAAQRFTDEPFVEIGT-----GDSPDYGIADADIVYVS 291 Query 298 CASEAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAP 357 AS AA E AA ILDSD WR LSA +D+RV+VVN++VWQTG+G+VAARG++ DLRWV+AP Sbjct 292 FASAAARENAATILDSDAWRALSAAQDDRVYVVNNEVWQTGQGVVAARGVLSDLRWVNAP 351 Query 358 IN 359 IN Sbjct 352 IN 353 >gi|126434420|ref|YP_001070111.1| periplasmic binding protein [Mycobacterium sp. JLS] gi|126234220|gb|ABN97620.1| periplasmic binding protein [Mycobacterium sp. JLS] Length=353 Score = 403 bits (1035), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 220/362 (61%), Positives = 267/362 (74%), Gaps = 12/362 (3%) Query 1 MRSTVAVAVAAAVIAASSGCGS---DQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCA 57 M TV+ + AA++A +GCGS D A S+IT TT +AGAGVLGN R+PDESCA Sbjct 1 MGPTVSATLVAALVAVLAGCGSTDADPAASAPMSSVITSTTSVAGAGVLGNQRRPDESCA 60 Query 58 RAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAAL 117 A DPGPP R +AAG + +V A+ +RIVVLSGDQLDALCALGLQSRIVAAAL Sbjct 61 AGPAPVDPGPPEREVRHAAGET----RVTADPRRIVVLSGDQLDALCALGLQSRIVAAAL 116 Query 118 PNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPT 177 P+ QPSYLG+ +HD+ GTRSAPD+ AI AA PDLILGSQ LTP+L+ L IAPT Sbjct 117 PDGRDEQPSYLGSVIHDVAPAGTRSAPDVDAIRAAAPDLILGSQALTPELFDALGQIAPT 176 Query 178 VFTAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTAN 237 VFT PGADW+ NLR VGAAT R A L+ GFA+ A + G +DA H+Q S+VQLT + Sbjct 177 VFTGPPGADWQANLRTVGAATGRFDATGGLLDGFADAARRTGLDNDAAHYQVSVVQLTED 236 Query 238 TMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLS 297 T+RVYGA NF SVL+ VG+DRP +QRFTD+ ++EIGT SPD+ ADADIVY+S Sbjct 237 TVRVYGARNFAGSVLAEVGLDRPAAQRFTDEPFVEIGT-----GDSPDYGIADADIVYVS 291 Query 298 CASEAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAP 357 AS AA E AA ILDSD WR LSA +D+RV+VVN++VWQTG+G+VAARG++ DLRWV+AP Sbjct 292 FASAAARENAATILDSDAWRALSAAQDDRVYVVNNEVWQTGQGVVAARGVLSDLRWVNAP 351 Query 358 IN 359 IN Sbjct 352 IN 353 >gi|118471624|ref|YP_885437.1| periplasmic binding protein [Mycobacterium smegmatis str. MC2 155] gi|118472378|ref|YP_886666.1| periplasmic binding protein [Mycobacterium smegmatis str. MC2 155] gi|118172911|gb|ABK73807.1| Periplasmic binding protein [Mycobacterium smegmatis str. MC2 155] gi|118173665|gb|ABK74561.1| Periplasmic binding protein [Mycobacterium smegmatis str. MC2 155] Length=357 Score = 389 bits (1000), Expect = 3e-106, Method: Compositional matrix adjust. Identities = 220/362 (61%), Positives = 256/362 (71%), Gaps = 11/362 (3%) Query 1 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA 60 R V A+ AA + SGCG+ SM T T+IA AGVLGN R+PDESCA Sbjct 4 FRPLVGTALIAAAASLISGCGTSGEQPVTQPSMTTSVTKIADAGVLGNQRRPDESCAPEP 63 Query 61 AAADPGPPTRPAHNAAGVSP---EMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAAL 117 AADP P R NA E +V + QRIVVLSGDQLDALCALGLQSRIVAAAL Sbjct 64 VAADPAP--RRVRNATADGADIAETTEVAGDPQRIVVLSGDQLDALCALGLQSRIVAAAL 121 Query 118 PNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPT 177 P+ S +QPSYLGT VHD+P G R+APD+ AI AA PDLILGS LTP + +L+ IAPT Sbjct 122 PDGSDAQPSYLGTVVHDVPPAGDRAAPDVAAIRAADPDLILGSAALTPGAFGELSDIAPT 181 Query 178 VFTAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTAN 237 VFT PGA W + LR VGAAT R A D LI GF + A + G +DA HFQAS+VQLT N Sbjct 182 VFTGTPGAAWRDTLRAVGAATGRAGAADDLIAGFEDAARKTGEDNDAAHFQASVVQLTEN 241 Query 238 TMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLS 297 T+RV+GA+NFP VL+AVG+DRP +QRFTDK Y EI A S DFS ADADIVY+S Sbjct 242 TVRVFGADNFPGDVLAAVGLDRPAAQRFTDKPYEEIP------ADSDDFSIADADIVYVS 295 Query 298 CASEAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAP 357 AS AA ++A +L D WRKLSANRDNRVFVVN++VWQTG+ +VAARGI+DDLRWV+AP Sbjct 296 FASPAARDKADAVLKGDAWRKLSANRDNRVFVVNNEVWQTGQNIVAARGILDDLRWVNAP 355 Query 358 IN 359 IN Sbjct 356 IN 357 >gi|315445188|ref|YP_004078067.1| ABC-type Fe3+-hydroxamate transporter, periplasmic component [Mycobacterium sp. Spyr1] gi|315263491|gb|ADU00233.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component [Mycobacterium sp. Spyr1] Length=405 Score = 387 bits (995), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 208/333 (63%), Positives = 246/333 (74%), Gaps = 8/333 (2%) Query 35 TPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNA--AGVSP---EMVQVPAEA 89 T T+IAGAGVLGNDR+PDESCA A D GPP R NA GV+P E+ V A+ Sbjct 73 TTVTRIAGAGVLGNDRRPDESCAPEPARLDDGPPDREVRNADAHGVTPPIPEVTTVRADP 132 Query 90 QRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAI 149 QRIVVLSGDQLDALCALGLQSRIVAAALP+ S QPSYLG +HDLPG GTRS PDL AI Sbjct 133 QRIVVLSGDQLDALCALGLQSRIVAAALPDGSDVQPSYLGQLIHDLPGAGTRSDPDLEAI 192 Query 150 AAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAATARIAAVDALIT 209 A PDLILGS LTP+ +P+L+ IAPTVF GA W++NLR VGAAT R AA DALI Sbjct 193 RGAEPDLILGSVALTPEEHPELSEIAPTVFEGPAGAAWKDNLRTVGAATGRAAAADALIE 252 Query 210 GFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKA 269 F A + G +DATHFQAS+VQ T TMRV+G ++F SVL+ VGVDRP +QRFTDK Sbjct 253 DFDRAADRTGIDNDATHFQASVVQFTDTTMRVFGVDSFAGSVLADVGVDRPATQRFTDKP 312 Query 270 YIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFV 329 YIE+G T DL SPD S AD D++Y+S A+ A +RA +L+SD WR+LSA RD+RVF Sbjct 313 YIEVGITDEDLGDSPDLSLADGDLIYVSFATAQARDRAPKVLESDAWRRLSATRDDRVFA 372 Query 330 VNDQVWQTGE---GMVAARGIVDDLRWVDAPIN 359 VN++VWQ + G+VAARGI+ DLRWV++PIN Sbjct 373 VNNEVWQGDQGPNGIVAARGILADLRWVNSPIN 405 >gi|145224857|ref|YP_001135535.1| periplasmic binding protein [Mycobacterium gilvum PYR-GCK] gi|145217343|gb|ABP46747.1| periplasmic binding protein [Mycobacterium gilvum PYR-GCK] Length=405 Score = 383 bits (984), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 206/333 (62%), Positives = 246/333 (74%), Gaps = 8/333 (2%) Query 35 TPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNA--AGVSP---EMVQVPAEA 89 T T+IAGAGVLGNDR+PDESCA A D GPP R NA GV+P E+ V A+ Sbjct 73 TTVTRIAGAGVLGNDRRPDESCAPEPARLDDGPPDREVRNADAHGVTPPIPEVTTVRADP 132 Query 90 QRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAI 149 QRIVVLSGDQLDALCALGLQSRIVAAALP+ S QPSYLG +HDLPG GTRS PDL AI Sbjct 133 QRIVVLSGDQLDALCALGLQSRIVAAALPDGSDVQPSYLGQLIHDLPGAGTRSDPDLEAI 192 Query 150 AAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAATARIAAVDALIT 209 A PDLILGS LTP+ + +L+ IAPTVF GA W++NLR VGAAT R AA DALI Sbjct 193 RGAEPDLILGSVALTPEEHLELSEIAPTVFEGPAGAAWKDNLRTVGAATGRAAAADALIE 252 Query 210 GFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKA 269 F + A + G +DATHFQAS+VQ T TMRV+G ++F SVL+ VGVDRP +QRFTDK Sbjct 253 DFDQAADRTGIDNDATHFQASVVQFTDTTMRVFGVDSFAGSVLADVGVDRPATQRFTDKP 312 Query 270 YIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFV 329 Y+E+G T DL SPD S AD D++Y+S A+ A +RA +L+SD WR+LSA RD+RVF Sbjct 313 YVEVGITDEDLGDSPDLSLADGDLIYVSFATAQARDRAPKVLESDAWRRLSATRDDRVFA 372 Query 330 VNDQVWQTGE---GMVAARGIVDDLRWVDAPIN 359 VN++VWQ + G+VAARGI+ DLRWV++PIN Sbjct 373 VNNEVWQGDQGPNGIVAARGILADLRWVNSPIN 405 >gi|169630471|ref|YP_001704120.1| FeIII-dicitrate-binding periplasmic lipoprotein [Mycobacterium abscessus ATCC 19977] gi|169242438|emb|CAM63466.1| Probable FeIII-dicitrate-binding periplasmic lipoprotein [Mycobacterium abscessus] Length=346 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 196/355 (56%), Positives = 249/355 (71%), Gaps = 18/355 (5%) Query 6 AVAVAAAVIAAS-SGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAAD 64 A A++AA++ A+ SGC +++P ++ ++ T TT+IA AGVLGN RKPDESCA+ AAA D Sbjct 9 AAAISAALVTATVSGC-TEKPTNETPSTLATSTTKIASAGVLGNARKPDESCAKDAAAVD 67 Query 65 PGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQ 124 P P R +A G + +VP +A+RIVVL +D LCALGLQ RIV AL + +++ Sbjct 68 PSAP-REVRHAQGET----EVPEDAKRIVVLDAGAIDTLCALGLQDRIVGVALADQAAAP 122 Query 125 PSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPG 184 PSYLGTTVH+LP +G ++PDL I AA PDLIL S G Y L+AIAPTV + G Sbjct 123 PSYLGTTVHNLPSIGPMASPDLAKIGAAKPDLILSSAG-EQNSYLDLSAIAPTVIVS--G 179 Query 185 ADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGA 244 D ++R VG AT R A D L TGF + A +VG ++DA HFQASIVQ T T+RVYGA Sbjct 180 HDLAEHVRLVGKATRRTADTDKLWTGFVDAAKKVGRENDAAHFQASIVQFTDQTVRVYGA 239 Query 245 NNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAA 304 NNFPASVL+ VG+DRP +QRFTD +IEIGT DFSAA+ DI+Y+S S +A Sbjct 240 NNFPASVLATVGLDRPATQRFTDTPFIEIGT--------EDFSAAEGDIIYVSFTSSSAK 291 Query 305 ERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAPIN 359 +RAA I S PW L A RDNRVF VN++VWQTG+G+VA RGI+DDL+WV+APIN Sbjct 292 DRAARIFGSKPWMALGATRDNRVFAVNNEVWQTGDGIVAGRGILDDLQWVNAPIN 346 >gi|226305842|ref|YP_002765802.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] gi|226184959|dbj|BAH33063.1| putative ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] Length=364 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 136/351 (39%), Positives = 188/351 (54%), Gaps = 19/351 (5%) Query 5 VAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESC---ARAAA 61 V++ AA + GC SD AS +++ TT IAGAGV+G +R +C +A Sbjct 22 VSILGIAATMLVLGGCSSDSSDDPAS-TIVRTTTSIAGAGVMGIERDTATACPTPTQADP 80 Query 62 AADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSS 121 A PG R H A +VP++ QRIVVL +DA+CALGL R+V AA Sbjct 81 GAGPGVKRRVVHTAG-----ETEVPSDPQRIVVLDSVSMDAVCALGLWERVVGAAT-GVD 134 Query 122 SSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTA 181 S QPSYLG + ++P VG SAPD+ A+ AA PDLILGS + LY QL AIAPTVF Sbjct 135 SPQPSYLGFGISEIPSVGPVSAPDVNAVKAAAPDLILGSSPASDGLYGQLDAIAPTVFAG 194 Query 182 APGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRV 241 A W+ G A R +A + + + Q+G +A+ QAS+V+ + +++ Sbjct 195 ADPVYWKAQFALAGQALGRSSAAATELDRYQQDVVQLGDALNASQTQASVVRFGSKDLQI 254 Query 242 YGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASE 301 G +F +LS VGV RPP+QR TD I + D SAA+ D++Y+ Sbjct 255 EGPASFAGQILSDVGVRRPPAQRLTDATTAPI--------PADDLSAAEGDLIYVLFDGP 306 Query 302 AAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 I+ SD W+ L+A D RVFV D++W G GM AAR ++ DL+ Sbjct 307 NGRTYGTEIMKSDQWQDLAAATDRRVFVAEDEIWN-GNGMTAARAVLADLK 356 >gi|229493400|ref|ZP_04387189.1| periplasmic binding protein [Rhodococcus erythropolis SK121] gi|229319716|gb|EEN85548.1| periplasmic binding protein [Rhodococcus erythropolis SK121] Length=364 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 134/351 (39%), Positives = 188/351 (54%), Gaps = 19/351 (5%) Query 5 VAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESC---ARAAA 61 V++ AA + GC SD AS +++ TT IAGAGV+G +R +C +A Sbjct 22 VSILGIAATMLVLGGCSSDSSDDPAS-TIVRTTTSIAGAGVMGIERDTATACPTPTQADP 80 Query 62 AADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSS 121 A PG R H A +VP++ QRIVVL +DA+CALGL R+V AA Sbjct 81 GAGPGVKRRVVHTAG-----ETEVPSDPQRIVVLDSVSMDAVCALGLWERVVGAAT-GVD 134 Query 122 SSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTA 181 S QPSYLG + ++P VG SAPD+ A+ AA PDLILGS + LY QL AIAPTVF Sbjct 135 SPQPSYLGFGISEIPSVGPVSAPDVNAVKAAAPDLILGSSPASDGLYGQLDAIAPTVFAG 194 Query 182 APGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRV 241 + W+ G A R +A + + + Q+G +A+ QAS+V+ + +++ Sbjct 195 SDPVYWKAQFALAGQALGRSSAAATELDRYQQDVVQLGDALNASQTQASVVRFGSKDLQI 254 Query 242 YGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASE 301 G +F +LS VGV RPP+QR TD I + D SAA+ D++Y+ Sbjct 255 EGPASFAGQILSDVGVRRPPAQRLTDATTAPI--------PADDLSAAEGDLIYVLFDGP 306 Query 302 AAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 ++ SD W+ L+A D RVFV D +W +G GM AAR ++ DL+ Sbjct 307 NGRTYGTEVMKSDQWQDLAAATDRRVFVAEDDIW-SGNGMTAARAVLADLK 356 >gi|54026267|ref|YP_120509.1| putative transporter [Nocardia farcinica IFM 10152] gi|54017775|dbj|BAD59145.1| putative transporter [Nocardia farcinica IFM 10152] Length=355 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 132/335 (40%), Positives = 178/335 (54%), Gaps = 20/335 (5%) Query 18 SGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAG 77 +GCG A AS S++ TT IAGAGV+G +R +C +A D TR +AAG Sbjct 32 TGCGDR--ADDAS-SIVRTTTNIAGAGVVGLERDTTYACP-LPSAPDQASGTRAVTHAAG 87 Query 78 VSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPG 137 VS +VPA+ QRIVVL+ LDA CALGL R+V A + QP YLGT V ++P Sbjct 88 VS----EVPADPQRIVVLTTSALDATCALGLWERVVGAVAVDGPRPQPQYLGTGVLEIPV 143 Query 138 VGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAA 197 VG+ + PDL AIA PD+I+G + L AIAPTV +P W+ A Sbjct 144 VGSAAEPDLAAIAGLRPDVIIGETPSGAATFDALRAIAPTVLVGSP-TGWQAEFAAFAAG 202 Query 198 TARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGV 257 R A A + + + A + GT AT QAS+V+ TA+TMRV GA++F VL+ GV Sbjct 203 LGREQAAAAALRSYRDEARETGTAIAATESQASVVRFTADTMRVQGADSFAGGVLADAGV 262 Query 258 DRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWR 317 RP +QR + D+A + D++Y+ A E E ++ W+ Sbjct 263 QRPAAQR----------GASFDVAAGRYQEQVEGDLIYVILAGEQGKEYGESVMRGREWK 312 Query 318 KLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 L A D+RVF V D VW G G+ AAR ++ DLR Sbjct 313 DLGAVSDHRVFAVEDSVWHGG-GLTAARALLTDLR 346 >gi|325675845|ref|ZP_08155529.1| iron(III) ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] gi|325553816|gb|EGD23494.1| iron(III) ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] Length=334 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 124/335 (38%), Positives = 175/335 (53%), Gaps = 33/335 (9%) Query 18 SGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAG 77 +GCGSD A AS +++ TT+IAGAGV+ +R +CA + A DPG Sbjct 26 AGCGSDT-ADDAS-TIVRTTTKIAGAGVVNVERDTGNACAEPSPA-DPGA---------- 72 Query 78 VSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPG 137 A+ QRIVVL LDA+CALGLQ R+V P+ + QPSYLG V LPG Sbjct 73 ---------ADPQRIVVLDTAALDAVCALGLQGRVVGTVTPDGADRQPSYLGPGVAALPG 123 Query 138 VGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAA 197 +G APD+ +A + PDLI+G+ P L +L A+APT F A W+N G A Sbjct 124 IGPARAPDVDLVAKSGPDLIVGAAPADPVLADRLRALAPTAFVGADAVFWKNRFLATGEA 183 Query 198 TARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGV 257 R A + + A ++G A QAS+V+ A+++ + G +F VL+ GV Sbjct 184 LGRSGAARQALDAYTADAARIGNDLAARQTQASVVRFGADSLAITGPGSFSGQVLADAGV 243 Query 258 DRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWR 317 RP QR +E+ K+ D A+ D++Y+S E ++DSD W Sbjct 244 QRPAYQR------LEVAAE-----KTDDLGTAEGDVIYVSFDGPDGLEHGKSVMDSDEWY 292 Query 318 KLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 L A D RVF V+D++W G G+VAAR ++ DL+ Sbjct 293 ALGAVPDKRVFAVDDEIWNGGNGIVAARAVLADLQ 327 >gi|312140535|ref|YP_004007871.1| substrate-binding lipoprotein [Rhodococcus equi 103S] gi|311889874|emb|CBH49191.1| putative substrate binding lipoprotein [Rhodococcus equi 103S] Length=334 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 124/335 (38%), Positives = 174/335 (52%), Gaps = 33/335 (9%) Query 18 SGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAG 77 +GCGSD A AS +++ TT+IAGAGV+ +R +CA + A DPG Sbjct 26 AGCGSDT-ADDAS-TIVRTTTKIAGAGVVNVERDTGNACAEPSPA-DPGA---------- 72 Query 78 VSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPG 137 A+ QRIVVL LDA+CALGLQ R+V P+ + QPSYLG V LPG Sbjct 73 ---------ADPQRIVVLDTAALDAVCALGLQGRVVGTVTPDGADGQPSYLGPGVAALPG 123 Query 138 VGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAA 197 +G APD+ +A + PDLI+G+ P L +L A+APT F A W+N G A Sbjct 124 IGPAGAPDVDLVAKSAPDLIVGAAPADPVLADRLRALAPTAFVGADAVFWKNRFLATGEA 183 Query 198 TARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGV 257 R A + + A ++G A QAS+V+ A+++ + G +F VL+ GV Sbjct 184 LGRSGAARQALDAYTADAARIGNDLAARQTQASVVRFGADSLAITGPGSFSGQVLADAGV 243 Query 258 DRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWR 317 RP QR +E+ D D A+ D++Y+S E ++DSD W Sbjct 244 QRPAYQR------LEVAAEEID-----DLGTAEGDVIYVSFDGPDGLEHGKSVMDSDEWY 292 Query 318 KLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 L A D RVF V+D++W G G+VAAR ++ DL+ Sbjct 293 ALGAVPDKRVFAVDDEIWNGGNGIVAARAVLADLQ 327 >gi|226365906|ref|YP_002783689.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226244396|dbj|BAH54744.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length=355 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 132/339 (39%), Positives = 172/339 (51%), Gaps = 24/339 (7%) Query 21 GSDQPAHK-ASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGVS 79 G QPA + S++ TTQIAGAGV+G +R +CA GP A AAG + Sbjct 26 GCSQPADDDPAASIVRTTTQIAGAGVVGIERDTTTACA--------GPAPVDAALAAGST 77 Query 80 PEMVQ------VPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVH 133 +V VP++ QRIVVL LDA+CALGL +V AA + S QP YLGT V Sbjct 78 HRVVHTKGESDVPSDPQRIVVLDSAALDAVCALGLWENVVGAATLDGDSPQPGYLGTGVS 137 Query 134 DLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRG 193 ++P VG APD+ IA A PDLILGS + QLY L+ IAPTVF + W+ Sbjct 138 EIPSVGPADAPDVNRIAQADPDLILGSSPASEQLYGALSPIAPTVFVGSDPVYWKAQFLL 197 Query 194 VGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLS 253 G A R A A + + + A Q+G DA QAS+V+ A++M V G F VL+ Sbjct 198 AGNALGRADAATAALEKYQQDAKQLGIDIDAAQTQASVVRFDADSMEVEGPATFAGQVLT 257 Query 254 AVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDS 313 GV RP AY + + D A+ D++Y E A ++ Sbjct 258 DAGVRRP--------AYQNLEGVVTEPISDADIDQAEGDLIYAVLDGEEGTAHAEDVMSG 309 Query 314 DPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 + W L A RD RVF V VW G G+VAAR ++ DLR Sbjct 310 ESWEDLEAVRDKRVFAVEGDVW-GGNGVVAARAMLTDLR 347 >gi|111023405|ref|YP_706377.1| iron ABC transporter substrate-binding protein [Rhodococcus jostii RHA1] gi|110822935|gb|ABG98219.1| ABC Fe(3+) transporter, substrate binding component [Rhodococcus jostii RHA1] Length=354 Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 132/336 (40%), Positives = 172/336 (52%), Gaps = 18/336 (5%) Query 21 GSDQPAHK-ASQSMITPTTQIAGAGVLGNDRKPDESCARAA---AAADPGPPTRPAHNAA 76 G QP+ + S++ TTQIAGAGV+G +R +CA A AA G R H Sbjct 25 GCSQPSDDDPAASIVRTTTQIAGAGVVGIERDTTTACAEPAPVDAALAAGSTHRVVHTKG 84 Query 77 GVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLP 136 VP++ QRIVVL LDA+CALGL +V AA + S QP YLGT + ++P Sbjct 85 -----ESDVPSDPQRIVVLDSAALDAVCALGLWKNVVGAATVDGDSPQPGYLGTGISEIP 139 Query 137 GVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGA 196 VG+ APD+ IA A PDLILGS + QLY L+ IAPTVF + W+ G Sbjct 140 SVGSVDAPDVNKIAQADPDLILGSSPASDQLYGALSPIAPTVFVGSDPVYWKAQFLLAGN 199 Query 197 ATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVG 256 A R A A + + + ATQ+G DA QAS+V+ A++M V G F VL+ G Sbjct 200 ALGRADAATAALEQYQQDATQLGVDIDAAQTQASVVRFDADSMEVEGPATFAGQVLTDAG 259 Query 257 VDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPW 316 V RP Q D A E T + D A+ D++Y E A ++ + W Sbjct 260 VRRPAYQNL-DGAVTEPITES-------DIDQAEGDLIYAVLDGEEGTAHAEDVMSGEAW 311 Query 317 RKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 L A D RVF V VW G G+VAAR ++ DLR Sbjct 312 EDLEAASDKRVFAVEGDVW-GGNGVVAARAMLTDLR 346 >gi|291301003|ref|YP_003512281.1| periplasmic binding protein [Stackebrandtia nassauensis DSM 44728] gi|290570223|gb|ADD43188.1| periplasmic binding protein [Stackebrandtia nassauensis DSM 44728] Length=310 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/291 (34%), Positives = 153/291 (53%), Gaps = 20/291 (6%) Query 66 GPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQP 125 G TR +A G + ++P + +++VVL D++D + +LG++ +AAA P+ + P Sbjct 31 GGKTRTIEHAMGST----EIPVKPKKVVVLDTDKIDTVMSLGVKP--IAAARPDEAE-LP 83 Query 126 SYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGA 185 YLG + D+ VGT +APD AI +PDLILG++ + Y +L+ IAPTVFT A G Sbjct 84 KYLGD-LSDVKVVGTLTAPDTEAIDKLNPDLILGTKFRQEEFYDELSEIAPTVFTEAVGT 142 Query 186 DWENNLRGVGAATARIAAVDALITGFAEHATQVGTK-HDATHFQASIVQLTANTMRVYGA 244 W+ N G A + L+ + A G K DA+ SI++ + +R+YG Sbjct 143 TWKENFLLDGDAIGKRDKAKDLLDEYETRAKDFGEKLGDASKTTVSIIRFMPDHIRMYGP 202 Query 245 NNFPASVLSAVGVDRPPSQRF---TDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASE 301 ++F V+ G+ RP Q+ DK + E+ + D ADAD+++ E Sbjct 203 DSFSGIVVGDTGLARPELQQLKDAKDKRFAELSSEKLD--------EADADVLFYCAYGE 254 Query 302 AAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 AAA+ A W+K+S +D V+D++W TG G+ AA I+DDL Sbjct 255 AAAKAQAESTGGSLWKKMSVVKDGNDHEVDDEIWMTGIGVTAANLILDDLE 305 >gi|302866647|ref|YP_003835284.1| periplasmic binding protein [Micromonospora aurantiaca ATCC 27029] gi|315503055|ref|YP_004081942.1| periplasmic binding protein [Micromonospora sp. L5] gi|302569506|gb|ADL45708.1| periplasmic binding protein [Micromonospora aurantiaca ATCC 27029] gi|315409674|gb|ADU07791.1| periplasmic binding protein [Micromonospora sp. L5] Length=314 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 97/286 (34%), Positives = 146/286 (52%), Gaps = 13/286 (4%) Query 69 TRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYL 128 TR ++ G + +VPAE +R+VVL D++D +LG+ V AA + S P+Y Sbjct 35 TREITHSMGTT----KVPAEPKRVVVLDTDKIDTALSLGVTP--VGAATAGEAKSWPTYF 88 Query 129 GT-TVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADW 187 G + + VG + PDL AI A +PDLILGS+ + Y +L+ IAPTVFT G W Sbjct 89 GADKLAGITEVGVLTEPDLEAINALNPDLILGSKFRQEKFYDELSKIAPTVFTEKVGVTW 148 Query 188 ENNLRGVGAATARIAAVDALITGFAEHATQVGTK-HDATHFQASIVQLTANTMRVYGANN 246 + N GAA + L+ + + A G K DA+ + SIV+ +R+YG ++ Sbjct 149 KENFLLDGAALGKEQQAKDLLAEYEKRAKDFGAKLGDASSRKVSIVRFMPTEIRLYGPDS 208 Query 247 FPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAER 306 F V+ G+ RP Q K + D + AD D+V+++ E AA Sbjct 209 FSGIVVGDTGLGRPERQMLAGKEDKRM-----DRVSPERIAEADGDVVFVTAYGEKAAAE 263 Query 307 AAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 A + W+ LSA + + VV+D++W TG G+ AA I+DDL Sbjct 264 QAKVTGGTLWKGLSAVKAGKAHVVSDEIWMTGIGVGAANKILDDLE 309 >gi|271963321|ref|YP_003337517.1| hypothetical protein Sros_1784 [Streptosporangium roseum DSM 43021] gi|270506496|gb|ACZ84774.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length=309 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 96/290 (34%), Positives = 143/290 (50%), Gaps = 14/290 (4%) Query 68 PTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSY 127 PTR +A G + +VP +R++VL D+LD + +LGL V AA + + P Y Sbjct 34 PTRTIKHAMGET----KVPEAPKRVIVLDTDKLDTMASLGLTP--VGAAQAAENQAWPKY 87 Query 128 LGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADW 187 LG+ + VGT AP+L AI A PDLILG++ Q Y +L+ IAPTVFT G W Sbjct 88 LGSALDATKPVGTLQAPNLEAITALKPDLILGTKFRQEQFYDKLSRIAPTVFTEKVGITW 147 Query 188 ENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNF 247 + NL A + A + L+ A++ T+ G+ + + SIV+ +R+YG +F Sbjct 148 KENLLLDADALGKKAQAEKLL---ADYRTRAGSLGGSDAVEVSIVRFMPTQIRMYGPESF 204 Query 248 PASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERA 307 V+ G RP QR D D + S AD D+++ S + AA+ Sbjct 205 SGIVVGDAGFGRPEPQRLADAQDRRF-----DELSQENLSQADGDVLFYSAYGDQAAQSQ 259 Query 308 AVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLRWVDAP 357 A + W+ L +D + V+D+ W G G+ AA I+DDL P Sbjct 260 ATVTGGPLWKNLPVVKDGKAHGVDDETWMLGIGVTAAGKILDDLEKFATP 309 >gi|229492185|ref|ZP_04385994.1| periplasmic binding protein [Rhodococcus erythropolis SK121] gi|229320973|gb|EEN86785.1| periplasmic binding protein [Rhodococcus erythropolis SK121] Length=343 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/353 (33%), Positives = 175/353 (50%), Gaps = 26/353 (7%) Query 2 RSTVAVA-VAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA 60 R++V VA VA A + A++ CGS A+ + T +A G L + D A+ Sbjct 10 RTSVRVAMVALATVFAATACGSSDAGGNANGN-----TDVATGGKLFS--TADTETAKLG 62 Query 61 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS 120 + A PG R +A G + + A+ R+VVL +LD + +LG+ V A P S Sbjct 63 SDAAPGEFPRTITHALGET----TLEAKPTRVVVLDSGELDEVLSLGITP--VGIASPES 116 Query 121 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT 180 ++ QPSYL + +P VGT + +L AI A PDLILGS+ +LYPQLAAIAPTVF+ Sbjct 117 AAGQPSYLADKLVGVPDVGTTNNLNLEAITALQPDLILGSKLRQDKLYPQLAAIAPTVFS 176 Query 181 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR 240 PG W+ N G A + ++ + EHA +V D + S+V+ + +R Sbjct 177 IRPGFPWKENFLLAGDALGEETKAEQVLNDYQEHADKVRESIDGSP-TVSLVRFMSGKLR 235 Query 241 VYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPD-FSAADADIVYLSCA 299 +YG +F +L VG+ RP Q D+ +E+ SP+ + A+ D ++ S Sbjct 236 LYGNLSFIGVILKDVGLPRPAIQDI-DELAVEV---------SPETITEAEGDRIFYSSY 285 Query 300 SEAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 A ++ W + A ++ R V+D+ W G G A ++DDL+ Sbjct 286 GNPADTGQTTVVAGPLWASMDAVKEGRATEVSDETWFLGLGPTGAGLVLDDLQ 338 >gi|331695874|ref|YP_004332113.1| ABC transporter periplasmic subunit [Pseudonocardia dioxanivorans CB1190] gi|326950563|gb|AEA24260.1| ABC-type transporter, periplasmic subunit [Pseudonocardia dioxanivorans CB1190] Length=342 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 107/300 (36%), Positives = 153/300 (51%), Gaps = 17/300 (5%) Query 53 DESCARAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRI 112 DE+ A +A PG R +AAG + ++ + QRI VL +LD + ALGL + Sbjct 56 DEATAAFSADVAPGVFPRTITHAAGTT----RLEKKPQRIAVLDSGELDDVIALGLTPVV 111 Query 113 VAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLA 172 +A N +++ PSYL G + +L AIAAA PDLILGS+ QLY +L+ Sbjct 112 MA----NPNNTPPSYLAEKTAGTATAGDTNNLNLEAIAAARPDLILGSKLRADQLYDRLS 167 Query 173 AIAPTVFTAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIV 232 AIAPTVF+ PG W+ N VGAAT A ++ + A +V ++ A S+V Sbjct 168 AIAPTVFSIRPGFPWKENFLLVGAATGEEDAAVRILNDYQHRADEVRSEVAAAPPTISMV 227 Query 233 QLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADAD 292 + +R+YG +F +LS VG+ RP +Q F D+ EI D AD D Sbjct 228 RFMPGRIRLYGNLSFIGVILSDVGLPRPKTQNF-DELAAEISAERID--------QADGD 278 Query 293 IVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 ++ S +LDS W+ LSA R + V V+D+VW G G V A ++DDL+ Sbjct 279 RIFYSSYGPPEQTAQPAVLDSALWKGLSAVRADHVRPVDDEVWFLGLGPVGAGKVLDDLQ 338 >gi|296141788|ref|YP_003649031.1| periplasmic binding protein [Tsukamurella paurometabola DSM 20162] gi|296029922|gb|ADG80692.1| periplasmic binding protein [Tsukamurella paurometabola DSM 20162] Length=346 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/301 (34%), Positives = 145/301 (49%), Gaps = 19/301 (6%) Query 53 DESCARAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRI 112 D A+ A PG R +AAGV+ ++P + +RIVVL +LD++ +LGL+ Sbjct 57 DAETAKLGTDAKPGVFPRTVRHAAGVT----EIPKKPERIVVLDTGELDSVLSLGLKP-- 110 Query 113 VAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLA 172 V SSS P+YL V + VG ++ AIA PDLILGS+ +LYPQL+ Sbjct 111 VGMVETEGSSSVPTYLADKVQGVERVGKIQNVNVEAIARLKPDLILGSKLRVDKLYPQLS 170 Query 173 AIAPTVFTAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIV 232 AIAPTVF+ PG W+ N R +GAAT + +A++A + + T S++ Sbjct 171 AIAPTVFSIRPGFPWKENFRLIGAATGEETKTVEQLNRYADNARALSARFTGTKPTISLL 230 Query 233 QLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADAD 292 + MRVY + +L G+ RP Q D+ +EI + S AD D Sbjct 231 RFMPGKMRVYADKSLIGVILQDAGLPRPAGQN-VDELAVEISME--------NLSKADGD 281 Query 293 IVYLSCAS--EAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDD 350 ++ S E E AA+ W +L A + + F V+D VW G G A IV Sbjct 282 YLFYSSYGKPENTGETAAIT--GPAWSQLGAVQRGKAFRVDDDVWYLGLGPTGASLIVQQ 339 Query 351 L 351 L Sbjct 340 L 340 >gi|226303946|ref|YP_002763904.1| iron-siderophore binding protein [Rhodococcus erythropolis PR4] gi|226183061|dbj|BAH31165.1| putative iron-siderophore binding protein [Rhodococcus erythropolis PR4] Length=343 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 112/353 (32%), Positives = 174/353 (50%), Gaps = 26/353 (7%) Query 2 RSTVAVA-VAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAA 60 R++V VA VA A + A++ CGS A+ + T +A G L + D A+ Sbjct 10 RTSVRVAMVALATVFAATACGSSDAGGNANGN-----TDVATGGKLFS--TADTETAKLG 62 Query 61 AAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNS 120 + A PG R +A G + + A+ R+VVL +LD + +LG+ V A P S Sbjct 63 SDAAPGEFPRTITHALGET----TLEAKPTRVVVLDSGELDEVLSLGITP--VGIASPES 116 Query 121 SSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFT 180 ++ QPSYL + +P VGT + +L AI A PDLILGS+ +LYPQL+AIAPTVF+ Sbjct 117 AAGQPSYLADKLVGVPDVGTTNNLNLEAITALQPDLILGSKLRQDKLYPQLSAIAPTVFS 176 Query 181 AAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMR 240 PG W+ N G A + ++ + HA QV D + S+V+ + +R Sbjct 177 IRPGFPWKENFLLAGDALGEETKAEQVLNDYQAHADQVRESIDGSP-TISLVRFMSGKLR 235 Query 241 VYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPD-FSAADADIVYLSCA 299 +YG +F +L VG+ RP Q + A +E+ SP+ + A+ D ++ S Sbjct 236 LYGNLSFIGVILKDVGLPRPAIQDINELA-VEV---------SPETITEAEGDRIFYSSY 285 Query 300 SEAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 A ++ W + A ++ R V+D+ W G G A ++DDL+ Sbjct 286 GNPADTGQTTVVAGPLWASMDAVKEGRATEVSDETWFLGLGPTGAGLVLDDLQ 338 >gi|260906070|ref|ZP_05914392.1| putative iron-siderophore uptake system exported solute-binding component [Brevibacterium linens BL2] Length=326 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/303 (34%), Positives = 146/303 (49%), Gaps = 22/303 (7%) Query 53 DESCARAAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRI 112 DE A+ + ADPG R +A G + + + QR+VVL +LD + +LG+ Sbjct 38 DEETAKLGSDADPGAFPRSIEHANGTT----DIAEKPQRVVVLDTGELDDVLSLGITP-- 91 Query 113 VAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLA 172 V ++ PSYL V + VGT + DL AIAA PDLILGSQ QLY +L Sbjct 92 VGMVTTEGANPVPSYLADRVKGVDTVGTINELDLEAIAALEPDLILGSQLRADQLYDELD 151 Query 173 AIAPTVFTAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQV--GTKHDATHFQAS 230 +IAPTVF+ PG W+ N VG A ++ G+A ++ G + + T S Sbjct 152 SIAPTVFSIRPGFPWKENFMLVGEALGMETEATDVLNGYATATDELDDGVEGNPT---IS 208 Query 231 IVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPD-FSAA 289 +V+ +R+YG + +L G+ RP +Q + A +EI SP+ A Sbjct 209 LVRFMPQRLRLYGNKSLIGVILDDAGLARPKAQDVEELA-VEI---------SPENLDQA 258 Query 290 DADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVD 349 D V+ + + A L W+ LSA D+R F V+D VW G G + A IVD Sbjct 259 GGDYVFYTSYGDPDATGETAALSGSQWKSLSAVEDDRAFRVDDDVWFLGLGPIGAGQIVD 318 Query 350 DLR 352 DL Sbjct 319 DLE 321 >gi|38233656|ref|NP_939423.1| putative iron-siderophore uptake system exported solute-binding component [Corynebacterium diphtheriae NCTC 13129] gi|38199917|emb|CAE49585.1| Putative iron-siderophore uptake system exported solute-binding component [Corynebacterium diphtheriae] Length=347 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 109/353 (31%), Positives = 168/353 (48%), Gaps = 26/353 (7%) Query 1 MRSTVAVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDR--KPDESCAR 58 MR +A+A A ++ + + C S + +Q T +A +G R D+ A+ Sbjct 12 MRPFLALATATVMMLSLAACSSSDNSSTNAQG----NTDVA----VGGQRFSTADQETAK 63 Query 59 AAAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALP 118 + A PG R +AAG + ++ + +R+VVL +LD++ +LG+ V Sbjct 64 LGSDAQPGQFPRTVVHAAGTT----EITTKPERVVVLDTGELDSVLSLGITP--VGMTTT 117 Query 119 NSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTV 178 ++ PSYL V D+ VGT + ++ AIAA PDLI+GSQ +LYPQL+ IAPTV Sbjct 118 KGANPVPSYLADKVKDVERVGTINELNIEAIAALKPDLIIGSQLRADKLYPQLSDIAPTV 177 Query 179 FTAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANT 238 F+ PG+ W+ N VG A + + +A+ ++ + + + S+V+ N Sbjct 178 FSIRPGSPWKENFLLVGEALGMEKEAEEKLNEYADRVAEL-KNNVPQNTEVSLVRFMPNK 236 Query 239 MRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSC 298 +R+YG + VL+ G+ RP Q D A +EI D AA + I Y S Sbjct 237 LRLYGNKSLIGVVLADAGLARPEKQNVDDLA-VEISPENID-------QAAGSVIFYTSY 288 Query 299 ASEAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDL 351 A AV+ + W+ L A + VND VW G G A IV DL Sbjct 289 GKPDATGETAVV-EGPAWKNLEAVAAGKAHRVNDDVWFLGLGPTGAMEIVSDL 340 >gi|108803262|ref|YP_643199.1| periplasmic binding protein [Rubrobacter xylanophilus DSM 9941] gi|108764505|gb|ABG03387.1| periplasmic binding protein [Rubrobacter xylanophilus DSM 9941] Length=319 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 82/269 (31%), Positives = 127/269 (48%), Gaps = 11/269 (4%) Query 84 QVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSA 143 +VP +R+VVL +LD+ LG++ A+P P YLG + VGT Sbjct 50 EVPERPERVVVLDTGELDSAITLGVKPVGAVEAVPGMGL--PEYLGEKTRGIELVGTIEQ 107 Query 144 PDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAATARIAA 203 P+L IAA PDLIL S+ ++Y QL+ IAPTVFT G W+ N A R Sbjct 108 PNLEKIAALDPDLILSSKLRHEKIYDQLSEIAPTVFTETTGVTWKQNFELHARALGRTER 167 Query 204 VDALITGFAEHATQVGTKHDATHF-QASIVQLTANTMRVYGANNFPASVLSAVGVDRPPS 262 + + + H ++ + + + S+V+ R+Y NF +VL VG+ RP S Sbjct 168 AEEVKREYRRHIRELRDELGEKPWPEVSVVRFVPGDTRIYQKENFIGTVLEDVGLPRPES 227 Query 263 QRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSAN 322 Q + A + + A D+++++ I++ WR+L A Sbjct 228 QDVEEFALLNVSKEA--------IPKMGGDVIFVTVYGNEEDTAKQEIMNDPLWRQLEAV 279 Query 323 RDNRVFVVNDQVWQTGEGMVAARGIVDDL 351 R+ RV+ V+D +W G G AA G++DDL Sbjct 280 REGRVYEVSDDLWMLGIGYTAANGVLDDL 308 >gi|227502608|ref|ZP_03932657.1| ferric siderophore ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium accolens ATCC 49725] gi|227076648|gb|EEI14611.1| ferric siderophore ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium accolens ATCC 49725] Length=345 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/355 (29%), Positives = 174/355 (50%), Gaps = 31/355 (8%) Query 1 MRSTVAVAVAAAV-IAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARA 59 + S++A AVA A+ ++A S +D+ + ++ + + G DE A+ Sbjct 11 LLSSMAAAVAIALSLSACSAAENDESKGGSGNESVSHSGERFGTA--------DEETAKL 62 Query 60 AAAADPGPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPN 119 A+PG R +A G + ++ + +R+VVL +LD++ +LG++ V Sbjct 63 GTDAEPGQFPRTIKHANGET----EIKEKPERVVVLDMGELDSVLSLGIKP--VGMVTSK 116 Query 120 SSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVF 179 ++ P YL V D+P VGT ++ IA PDLI+GSQ LY QL+ IAPTV Sbjct 117 GANPVPDYLADKVKDVPSVGTIQEVNVEKIAELKPDLIVGSQLRVDDLYGQLSDIAPTVL 176 Query 180 TAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTK--HDATHFQASIVQLTAN 237 PG W+ + R +G A ++ +A+ Q+ K D T S+++ + Sbjct 177 AIRPGYPWKEDFRLIGDALGEEEKTVDILNDYADTLAQIKEKMPKDTT---VSMLRFMPD 233 Query 238 TMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPD-FSAADADIVYL 296 +R+Y + +L G+DRP +Q +I AA++ SP+ S AD D ++ Sbjct 234 KIRLYANKSLIGVILRDAGLDRPENQ--------DIDELAAEI--SPESISEADGDYLFY 283 Query 297 SCASEAAAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDL 351 S + +A I++S+ ++ LSA ++ + F V+D +W G G A+ I ++L Sbjct 284 SSYGDPSATGEDKIVESEQFKNLSAVKEGKAFRVSDDLWFLGLGPTGAKKIAEEL 338 >gi|326381490|ref|ZP_08203184.1| periplasmic-binding protein [Gordonia neofelifaecis NRRL B-59395] gi|326199737|gb|EGD56917.1| periplasmic-binding protein [Gordonia neofelifaecis NRRL B-59395] Length=340 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 92/273 (34%), Positives = 135/273 (50%), Gaps = 25/273 (9%) Query 87 AEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDL 146 A+ RIVV LDALCALG+ +++ A P + S P YLG +P +G PD Sbjct 77 ADVTRIVVTDPALLDALCALGMGAQVKGLAAP--AGSVPEYLGPQFTSIPTLG--DTPDA 132 Query 147 RAIAAAHPDLILGSQGLTPQLYPQLAAIAPT-------VFTAAPGADWENNLRGVGAATA 199 A+ A P+++L S P+ +L A+ T T P DW+ R V A Sbjct 133 TAVKKAAPEVVLSS----PETADRLTALRATGALGTARTVTVDPAGDWQQAFRDVAAGMN 188 Query 200 RIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVDR 259 R A A + F A +VG DA H + S+V+ T + + G ++F A +++ +GV R Sbjct 189 RTGAATARLAEFTAEAHRVGRVMDAPHSEVSLVRFTPDAEMIEGTSSFGAQIMAIIGVAR 248 Query 260 PPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKL 319 P QR D A A +FS ADAD++Y+S E ER +L SD W+ + Sbjct 249 PAPQRTPD----------AVPATDANFSDADADLIYVSYQGEKGLERGKDVLLSDRWKDM 298 Query 320 SANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 A NRV V+D VW G+ AA +++D++ Sbjct 299 GAPTWNRVLSVDDTVWYETSGLAAAWLVLNDVK 331 >gi|306835175|ref|ZP_07468211.1| ferric siderophore ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium accolens ATCC 49726] gi|304568930|gb|EFM44459.1| ferric siderophore ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium accolens ATCC 49726] Length=345 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/349 (29%), Positives = 168/349 (49%), Gaps = 31/349 (8%) Query 6 AVAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADP 65 AVA+A ++ A S+ D ++S+ + A DE A+ A+P Sbjct 18 AVAIALSLSACSAAENDDSKGGPGNESVSHSGERFGTA---------DEETAKLGTDAEP 68 Query 66 GPPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQP 125 G R +A G + ++ + +R+VVL +LD++ +LG++ V ++ P Sbjct 69 GQFPRTIKHANGET----EIKEKPERVVVLDMGELDSVLSLGIKP--VGMVTSKGANPVP 122 Query 126 SYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGA 185 YL V D+P VGT ++ IA PDLI+GSQ LY QL+ IAPTV PG Sbjct 123 DYLADKVKDVPSVGTIQEVNVEKIAELKPDLIVGSQLRVDDLYGQLSDIAPTVLAIRPGY 182 Query 186 DWENNLRGVGAATARIAAVDALITGFAEHATQVGTK--HDATHFQASIVQLTANTMRVYG 243 W+ + R +G A ++ +A+ +V K D T S+++ + +R+Y Sbjct 183 PWKEDFRLIGDALGEEEKTVDILNDYADTLAEVKEKMPKDTT---VSMLRFMPDKIRLYA 239 Query 244 ANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPD-FSAADADIVYLSCASEA 302 + +L G+DRP +Q +I AA++ SP+ S AD D ++ S + Sbjct 240 NKSLIGVILRDAGLDRPENQ--------DIDELAAEI--SPESISEADGDYLFYSSYGDP 289 Query 303 AAERAAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDL 351 +A I++S+ ++ LSA ++ + F V+D +W G G A+ I ++L Sbjct 290 SATGEDKIVESEQFKNLSAVKEGKAFRVSDDLWFLGLGPTGAKKIAEEL 338 >gi|343926899|ref|ZP_08766392.1| putative ABC transporter substrate-binding protein [Gordonia alkanivorans NBRC 16433] gi|343763259|dbj|GAA13318.1| putative ABC transporter substrate-binding protein [Gordonia alkanivorans NBRC 16433] Length=325 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/334 (30%), Positives = 151/334 (46%), Gaps = 39/334 (11%) Query 20 CGSDQPAHKASQSMITPT-TQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAAGV 78 C D+P S I+ T T++A ++ DR ++C PT PA +AA Sbjct 23 CSGDEPLTTPDGSTISTTVTRVAEVNIVSADRDFSKTCL---------APT-PADDAA-- 70 Query 79 SPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGV 138 + RIVV LDALCALG+ ++ A + + S P+YLG + +P + Sbjct 71 --------TDPTRIVVTDPALLDALCALGIGDKVTA--VTAAPGSVPAYLGPRLSSVPAI 120 Query 139 GTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAAT 198 GT APD A++ A DL+L LTP+ P DW+ + V A Sbjct 121 GT--APDAAAVSQADADLVL----LTPETAASSKPFGSVRSATIPAGDWQEQFQAVADAV 174 Query 199 ARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVD 258 R A + F A + G + DA+H Q S+V+ ++ + G + F VL +GV Sbjct 175 GRSEAGRQRLAEFTTEAAKTGRRMDASHTQVSLVRFGEDSETIAGMDTFAGQVLGEIGVQ 234 Query 259 RPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRK 318 RP QR D + S +F A+ D++Y+S E E +L SD W Sbjct 235 RPGPQRVPDSFPV----------TSENFREAEGDLIYVSFEGEKGQEHGEEVLLSDEWLG 284 Query 319 LSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 L A+ RV V+D VW G+ AA +++D++ Sbjct 285 LGASMWKRVLAVDDAVWYDSSGLAAAWLVLNDVK 318 >gi|226363631|ref|YP_002781413.1| iron-siderophore binding protein [Rhodococcus opacus B4] gi|226242120|dbj|BAH52468.1| putative iron-siderophore binding protein [Rhodococcus opacus B4] Length=335 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 103/346 (30%), Positives = 162/346 (47%), Gaps = 27/346 (7%) Query 7 VAVAAAVIAASSGCGSDQPAHKASQSMITPTTQIAGAGVLGNDRKPDESCARAAAAADPG 66 VA+A+ +AA CG+ A T +A G L D A+ A+PG Sbjct 12 VALASVFLAA---CGTTDTGSTAGN------TDVATGGRLF--ATADAETAKLGTDAEPG 60 Query 67 PPTRPAHNAAGVSPEMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPS 126 R +A G E V + + +R++VL G +LD + +LG+ V A P S++ QPS Sbjct 61 VFPRTITHALG---ETV-IEKKPERVIVLDGGELDDVLSLGITP--VGLASPESAAGQPS 114 Query 127 YLGTTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGAD 186 YL + +P VGT + +L AI+A PDLILGS+ +LYPQL++IAPTVF PG Sbjct 115 YLADKLTGVPDVGTTNNLNLEAISALQPDLILGSKLRADKLYPQLSSIAPTVFGIRPGFP 174 Query 187 WENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANN 246 W+ N V A + ++ + A +V + S+V+ + +R+YG + Sbjct 175 WKENFLLVADALGEETKAEDVLNAYQTRAGEV-RESITGEPTISLVRFMSGKIRLYGNLS 233 Query 247 FPASVLSAVGVDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAER 306 F +L VG+ RP Q D+ +E+ ADAD ++ S Sbjct 234 FIGVILQDVGLPRPAVQN-VDELAVEV--------SQETIGEADADRIFYSSYGAPETTD 284 Query 307 AAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 + ++ W ++ A +D + V+D+ W G A ++DDL Sbjct 285 ESTVVGGPLWNQMQAVKDGKSVHVSDETWFLALGPTGAMLVLDDLE 330 >gi|16329185|ref|NP_439913.1| iron(III) dicitrate ABC transporter permease [Synechocystis sp. PCC 6803] gi|1651665|dbj|BAA16593.1| iron(III) dicitrate transport system permease protein; FecB [Synechocystis sp. PCC 6803] gi|339272276|dbj|BAK48763.1| iron(III) dicitrate transport system permeaseprotein [Synechocystis sp. PCC 6803] Length=315 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 90/272 (34%), Positives = 132/272 (49%), Gaps = 14/272 (5%) Query 85 VPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAP 144 VP E QRIVVL+ + D + ALG+ V A S YL + +P VG P Sbjct 49 VPNEPQRIVVLTNEATDMVLALGVTP--VGAVKSWSGDPYYEYLAKDMLGVPIVGDEMQP 106 Query 145 DLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVFTAAPGADWENNLRGVGAATARIAAV 204 +L I A PDLI+GS+ Q+Y L+AIAPTVF+ G W++NLR G A R A Sbjct 107 NLEKIVALQPDLIIGSRLRQGQIYKSLSAIAPTVFSETIGESWQDNLRLYGQALDREAEA 166 Query 205 DALITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQR 264 + L+ + Q+ K A S+V+ R+Y N+FP +L AVG++RP SQ Sbjct 167 EQLLNDWDTRVAQMRQKLSAKDLTISLVRFMPRGARIYLQNSFPGQILQAVGLERPASQ- 225 Query 265 FTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAERAAVI----LDSDPWRKLS 320 + + E + P ADA + Y ++ + I L+ W++L Sbjct 226 -ANHGFAE----HVSFEQIPQME-ADA-LFYFIYTGDSGDQTPGSITNPWLNHPLWQQLE 278 Query 321 ANRDNRVFVVNDQVWQTGEGMVAARGIVDDLR 352 + + + V+D VW T G+ AA ++DDL Sbjct 279 VVQSGKAYAVSDVVWTTAGGIQAAHLLLDDLE 310 Lambda K H 0.315 0.128 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 669804029900 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40