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<TITLE>BLAST Search Results</TITLE>
<BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
<PRE>
<b>BLASTP 2.2.25+</b>
<b><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Retrieve&list_uids=9254694&dopt=Citation">Reference</a>:</b>
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
<b><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Retrieve&list_uids=11452024&dopt=Citation">Reference for composition-based statistics</a>:</b>
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
<b>Query=</b> Rv3047c
Length=94
Score E
Sequences producing significant alignments: (Bits) Value
<a title="Show report for NP_217563.1" href="http://www.ncbi.nlm.nih.gov/protein/15610184?report=genbank&log$=prottop&blast_rank=1&RID=" >gi|15610184|ref|NP_217563.1|</a> hypothetical protein Rv3047c [Mycob... <a href=#15610184> 191</a> 4e-47
<a title="Show report for ZP_06506233.1" href="http://www.ncbi.nlm.nih.gov/protein/289746855?report=genbank&log$=prottop&blast_rank=2&RID=" >gi|289746855|ref|ZP_06506233.1|</a> conserved hypothetical protein [... <a href=#289746855> 189</a> 1e-46
<a title="Show report for YP_004746491.1" href="http://www.ncbi.nlm.nih.gov/protein/340628039?report=genbank&log$=prottop&blast_rank=3&RID=" >gi|340628039|ref|YP_004746491.1|</a> hypothetical protein MCAN_30721... <a href=#340628039> 182</a> 1e-44
<a title="Show report for XP_001734798.1" href="http://www.ncbi.nlm.nih.gov/protein/167378432?report=genbank&log$=prottop&blast_rank=4&RID=" >gi|167378432|ref|XP_001734798.1|</a> NMDA receptor-regulated protein... <a href=#167378432>37.0</a> 0.95
<a title="Show report for XP_648732.1" href="http://www.ncbi.nlm.nih.gov/protein/67465095?report=genbank&log$=prottop&blast_rank=5&RID=" >gi|67465095|ref|XP_648732.1|</a> hypothetical protein [Entamoeba his... <a href=#67465095>37.0</a> 0.95
<script src="blastResult.js"></script>><a title="Show report for NP_217563" href="http://www.ncbi.nlm.nih.gov/protein/15610184?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|15610184|ref|NP_217563.1|</a><a name=15610184></a> hypothetical protein Rv3047c [Mycobacterium tuberculosis H37Rv]
<a title="Show report for NP_337649" href="http://www.ncbi.nlm.nih.gov/protein/15842612?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|15842612|ref|NP_337649.1|</a><a name=15842612></a> hypothetical protein MT3132 [Mycobacterium tuberculosis CDC1551]
<a title="Show report for NP_856718" href="http://www.ncbi.nlm.nih.gov/protein/31794225?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|31794225|ref|NP_856718.1|</a><a name=31794225></a> hypothetical protein Mb3073c [Mycobacterium bovis AF2122/97]
<a href="javascript:ReverseDisplay('info_31794225')" title="Other sequence titles" onmouseover="showInfo(this)" class="resArrowLinkW mdl hiding" id="31794225">52 more sequence titles</a>
<div id="info_31794225" style="display:none;" class="helpbox mdlbox hidden"><a title="Show report for YP_979155" href="http://www.ncbi.nlm.nih.gov/protein/121638931?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|121638931|ref|YP_979155.1|</a><a name=121638931></a> hypothetical protein BCG_3071c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
<a title="Show report for YP_001284423" href="http://www.ncbi.nlm.nih.gov/protein/148662900?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|148662900|ref|YP_001284423.1|</a><a name=148662900></a> hypothetical protein MRA_3079 [Mycobacterium tuberculosis H37Ra]
<a title="Show report for YP_001288992" href="http://www.ncbi.nlm.nih.gov/protein/148824238?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|148824238|ref|YP_001288992.1|</a><a name=148824238></a> hypothetical protein TBFG_13063 [Mycobacterium tuberculosis F11]
<a title="Show report for ZP_02551925" href="http://www.ncbi.nlm.nih.gov/protein/167969648?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|167969648|ref|ZP_02551925.1|</a><a name=167969648></a> hypothetical protein MtubH3_17143 [Mycobacterium tuberculosis
H37Ra]
<a title="Show report for YP_002646112" href="http://www.ncbi.nlm.nih.gov/protein/224991423?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|224991423|ref|YP_002646112.1|</a><a name=224991423></a> hypothetical protein JTY_3066 [Mycobacterium bovis BCG str. Tokyo
172]
<a title="Show report for YP_003030856" href="http://www.ncbi.nlm.nih.gov/protein/253797855?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|253797855|ref|YP_003030856.1|</a><a name=253797855></a> hypothetical protein TBMG_00921 [Mycobacterium tuberculosis KZN
1435]
<a title="Show report for ZP_04927002" href="http://www.ncbi.nlm.nih.gov/protein/254233677?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|254233677|ref|ZP_04927002.1|</a><a name=254233677></a> hypothetical protein TBCG_02983 [Mycobacterium tuberculosis C]
<a title="Show report for ZP_04981722" href="http://www.ncbi.nlm.nih.gov/protein/254365677?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|254365677|ref|ZP_04981722.1|</a><a name=254365677></a> hypothetical protein TBHG_02976 [Mycobacterium tuberculosis str.
Haarlem]
<a title="Show report for ZP_05142569" href="http://www.ncbi.nlm.nih.gov/protein/254552122?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|254552122|ref|ZP_05142569.1|</a><a name=254552122></a> hypothetical protein Mtube_17001 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
<a title="Show report for ZP_06434354" href="http://www.ncbi.nlm.nih.gov/protein/289444610?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289444610|ref|ZP_06434354.1|</a><a name=289444610></a> hypothetical protein TBLG_03667 [Mycobacterium tuberculosis T46]
<a title="Show report for ZP_06438469" href="http://www.ncbi.nlm.nih.gov/protein/289448725?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289448725|ref|ZP_06438469.1|</a><a name=289448725></a> conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
<a title="Show report for ZP_06442372" href="http://www.ncbi.nlm.nih.gov/protein/289553162?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289553162|ref|ZP_06442372.1|</a><a name=289553162></a> hypothetical protein TBXG_00912 [Mycobacterium tuberculosis KZN
605]
<a title="Show report for ZP_06451476" href="http://www.ncbi.nlm.nih.gov/protein/289571249?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289571249|ref|ZP_06451476.1|</a><a name=289571249></a> hypothetical protein TBJG_01780 [Mycobacterium tuberculosis T17]
<a title="Show report for ZP_06455984" href="http://www.ncbi.nlm.nih.gov/protein/289575757?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289575757|ref|ZP_06455984.1|</a><a name=289575757></a> conserved hypothetical protein [Mycobacterium tuberculosis K85]
<a title="Show report for ZP_06511097" href="http://www.ncbi.nlm.nih.gov/protein/289751719?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289751719|ref|ZP_06511097.1|</a><a name=289751719></a> hypothetical protein TBDG_02248 [Mycobacterium tuberculosis T92]
<a title="Show report for ZP_06514541" href="http://www.ncbi.nlm.nih.gov/protein/289755163?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289755163|ref|ZP_06514541.1|</a><a name=289755163></a> conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
<a title="Show report for ZP_06522603" href="http://www.ncbi.nlm.nih.gov/protein/289763225?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289763225|ref|ZP_06522603.1|</a><a name=289763225></a> hypothetical protein TBIG_02749 [Mycobacterium tuberculosis GM
1503]
<a title="Show report for ZP_06953458" href="http://www.ncbi.nlm.nih.gov/protein/297635678?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|297635678|ref|ZP_06953458.1|</a><a name=297635678></a> hypothetical protein MtubK4_16222 [Mycobacterium tuberculosis
KZN 4207]
<a title="Show report for ZP_06961794" href="http://www.ncbi.nlm.nih.gov/protein/297732676?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|297732676|ref|ZP_06961794.1|</a><a name=297732676></a> hypothetical protein MtubKR_16382 [Mycobacterium tuberculosis
KZN R506]
<a title="Show report for ZP_07013926" href="http://www.ncbi.nlm.nih.gov/protein/298526517?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|298526517|ref|ZP_07013926.1|</a><a name=298526517></a> hypothetical protein TBAG_01935 [Mycobacterium tuberculosis 94_M4241A]
<a title="Show report for ZP_07433049" href="http://www.ncbi.nlm.nih.gov/protein/306794747?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|306794747|ref|ZP_07433049.1|</a><a name=306794747></a> hypothetical protein TMEG_02319 [Mycobacterium tuberculosis SUMu005]
<a title="Show report for ZP_07437291" href="http://www.ncbi.nlm.nih.gov/protein/306798989?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|306798989|ref|ZP_07437291.1|</a><a name=306798989></a> hypothetical protein TMFG_00249 [Mycobacterium tuberculosis SUMu006]
<a title="Show report for ZP_07494892" href="http://www.ncbi.nlm.nih.gov/protein/307085779?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|307085779|ref|ZP_07494892.1|</a><a name=307085779></a> hypothetical protein TMLG_02901 [Mycobacterium tuberculosis SUMu012]
<a title="Show report for ZP_07816888" href="http://www.ncbi.nlm.nih.gov/protein/313660008?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|313660008|ref|ZP_07816888.1|</a><a name=313660008></a> hypothetical protein MtubKV_16382 [Mycobacterium tuberculosis
KZN V2475]
<a title="Show report for YP_004724697" href="http://www.ncbi.nlm.nih.gov/protein/339633055?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|339633055|ref|YP_004724697.1|</a><a name=339633055></a> hypothetical protein MAF_30540 [Mycobacterium africanum GM041182]
<a title="Show report for CAA16132" href="http://www.ncbi.nlm.nih.gov/protein/2791645?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|2791645|emb|CAA16132.1|</a><a name=2791645></a> HYPOTHETICAL PROTEIN Rv3047c [Mycobacterium tuberculosis H37Rv]
<a title="Show report for AAK47463" href="http://www.ncbi.nlm.nih.gov/protein/13882927?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|13882927|gb|AAK47463.1|</a><a name=13882927></a> hypothetical protein MT3132 [Mycobacterium tuberculosis CDC1551]
<a title="Show report for CAD96760" href="http://www.ncbi.nlm.nih.gov/protein/31619820?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|31619820|emb|CAD96760.1|</a><a name=31619820></a> HYPOTHETICAL PROTEIN Mb3073c [Mycobacterium bovis AF2122/97]
<a title="Show report for CAL73060" href="http://www.ncbi.nlm.nih.gov/protein/121494579?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|121494579|emb|CAL73060.1|</a><a name=121494579></a> Hypothetical protein BCG_3071c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
<a title="Show report for EAY58310" href="http://www.ncbi.nlm.nih.gov/protein/124599206?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|124599206|gb|EAY58310.1|</a><a name=124599206></a> hypothetical protein TBCG_02983 [Mycobacterium tuberculosis C]
<a title="Show report for EBA43235" href="http://www.ncbi.nlm.nih.gov/protein/134151190?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|134151190|gb|EBA43235.1|</a><a name=134151190></a> hypothetical protein TBHG_02976 [Mycobacterium tuberculosis str.
Haarlem]
<a title="Show report for ABQ74861" href="http://www.ncbi.nlm.nih.gov/protein/148507052?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|148507052|gb|ABQ74861.1|</a><a name=148507052></a> hypothetical protein MRA_3079 [Mycobacterium tuberculosis H37Ra]
<a title="Show report for ABR07390" href="http://www.ncbi.nlm.nih.gov/protein/148722765?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|148722765|gb|ABR07390.1|</a><a name=148722765></a> hypothetical protein TBFG_13063 [Mycobacterium tuberculosis F11]
<a title="Show report for BAH27344" href="http://www.ncbi.nlm.nih.gov/protein/224774538?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|224774538|dbj|BAH27344.1|</a><a name=224774538></a> hypothetical protein JTY_3066 [Mycobacterium bovis BCG str. Tokyo
172]
<a title="Show report for ACT23961" href="http://www.ncbi.nlm.nih.gov/protein/253319358?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|253319358|gb|ACT23961.1|</a><a name=253319358></a> hypothetical protein TBMG_00921 [Mycobacterium tuberculosis KZN
1435]
<a title="Show report for EFD14769" href="http://www.ncbi.nlm.nih.gov/protein/289417529?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289417529|gb|EFD14769.1|</a><a name=289417529></a> hypothetical protein TBLG_03667 [Mycobacterium tuberculosis T46]
<a title="Show report for EFD18884" href="http://www.ncbi.nlm.nih.gov/protein/289421683?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289421683|gb|EFD18884.1|</a><a name=289421683></a> conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
<a title="Show report for EFD20287" href="http://www.ncbi.nlm.nih.gov/protein/289437794?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289437794|gb|EFD20287.1|</a><a name=289437794></a> hypothetical protein TBXG_00912 [Mycobacterium tuberculosis KZN
605]
<a title="Show report for EFD44766" href="http://www.ncbi.nlm.nih.gov/protein/289540188?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289540188|gb|EFD44766.1|</a><a name=289540188></a> conserved hypothetical protein [Mycobacterium tuberculosis K85]
<a title="Show report for EFD48651" href="http://www.ncbi.nlm.nih.gov/protein/289545003?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289545003|gb|EFD48651.1|</a><a name=289545003></a> hypothetical protein TBJG_01780 [Mycobacterium tuberculosis T17]
<a title="Show report for EFD59735" href="http://www.ncbi.nlm.nih.gov/protein/289692306?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289692306|gb|EFD59735.1|</a><a name=289692306></a> hypothetical protein TBDG_02248 [Mycobacterium tuberculosis T92]
<a title="Show report for EFD63179" href="http://www.ncbi.nlm.nih.gov/protein/289695750?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289695750|gb|EFD63179.1|</a><a name=289695750></a> conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
<a title="Show report for EFD74747" href="http://www.ncbi.nlm.nih.gov/protein/289710731?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|289710731|gb|EFD74747.1|</a><a name=289710731></a> hypothetical protein TBIG_02749 [Mycobacterium tuberculosis GM
1503]
<a title="Show report for EFI31605" href="http://www.ncbi.nlm.nih.gov/protein/298496311?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|298496311|gb|EFI31605.1|</a><a name=298496311></a> hypothetical protein TBAG_01935 [Mycobacterium tuberculosis 94_M4241A]
<a title="Show report for EFP25773" href="http://www.ncbi.nlm.nih.gov/protein/308336922?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|308336922|gb|EFP25773.1|</a><a name=308336922></a> hypothetical protein TMEG_02319 [Mycobacterium tuberculosis SUMu005]
<a title="Show report for EFP29589" href="http://www.ncbi.nlm.nih.gov/protein/308340738?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|308340738|gb|EFP29589.1|</a><a name=308340738></a> hypothetical protein TMFG_00249 [Mycobacterium tuberculosis SUMu006]
<a title="Show report for EFP53551" href="http://www.ncbi.nlm.nih.gov/protein/308364700?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|308364700|gb|EFP53551.1|</a><a name=308364700></a> hypothetical protein TMLG_02901 [Mycobacterium tuberculosis SUMu012]
<a title="Show report for EGB27457" href="http://www.ncbi.nlm.nih.gov/protein/323718279?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|323718279|gb|EGB27457.1|</a><a name=323718279></a> hypothetical protein TMMG_02179 [Mycobacterium tuberculosis CDC1551A]
<a title="Show report for AEB03055" href="http://www.ncbi.nlm.nih.gov/protein/328457632?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|328457632|gb|AEB03055.1|</a><a name=328457632></a> hypothetical protein TBSG_00926 [Mycobacterium tuberculosis KZN
4207]
<a title="Show report for CCC28124" href="http://www.ncbi.nlm.nih.gov/protein/339332411?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|339332411|emb|CCC28124.1|</a><a name=339332411></a> hypothetical protein MAF_30540 [Mycobacterium africanum GM041182]
<a title="Show report for CCC65648" href="http://www.ncbi.nlm.nih.gov/protein/341602970?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|341602970|emb|CCC65648.1|</a><a name=341602970></a> hypothetical protein BCGM_3055c [Mycobacterium bovis BCG str.
Moreau RDJ]
<a title="Show report for AEN01514" href="http://www.ncbi.nlm.nih.gov/protein/344220883?report=genbank&log$=protalign&blast_rank=1&RID=0" >gi|344220883|gb|AEN01514.1|</a><a name=344220883></a> hypothetical protein MTCTRI2_3110 [Mycobacterium tuberculosis
CTRI-2]
</div>Length=94
Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)
Query 1 MGGPFDADAEAHFDEVAEAFAKLTNVDRDVGVDLEKELCMTVEADDRSDALVTRRLLPRV 60
MGGPFDADAEAHFDEVAEAFAKLTNVDRDVGVDLEKELCMTVEADDRSDALVTRRLLPRV
Sbjct 1 MGGPFDADAEAHFDEVAEAFAKLTNVDRDVGVDLEKELCMTVEADDRSDALVTRRLLPRV 60
Query 61 PRCIPLAARLAPGTIGCPSFWNPIATGGASRQAL 94
PRCIPLAARLAPGTIGCPSFWNPIATGGASRQAL
Sbjct 61 PRCIPLAARLAPGTIGCPSFWNPIATGGASRQAL 94
><a title="Show report for ZP_06506233" href="http://www.ncbi.nlm.nih.gov/protein/289746855?report=genbank&log$=protalign&blast_rank=2&RID=0" >gi|289746855|ref|ZP_06506233.1|</a><a name=289746855></a> conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
<a title="Show report for ZP_06518550" href="http://www.ncbi.nlm.nih.gov/protein/289759172?report=genbank&log$=protalign&blast_rank=2&RID=0" >gi|289759172|ref|ZP_06518550.1|</a><a name=289759172></a> conserved hypothetical protein [Mycobacterium tuberculosis T85]
<a title="Show report for ZP_06799140" href="http://www.ncbi.nlm.nih.gov/protein/294993449?report=genbank&log$=protalign&blast_rank=2&RID=0" >gi|294993449|ref|ZP_06799140.1|</a><a name=294993449></a> hypothetical protein Mtub2_02817 [Mycobacterium tuberculosis
210]
<a title="Show report for EFD54871" href="http://www.ncbi.nlm.nih.gov/protein/289687383?report=genbank&log$=protalign&blast_rank=2&RID=0" >gi|289687383|gb|EFD54871.1|</a><a name=289687383></a> conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
<a title="Show report for EFD78748" href="http://www.ncbi.nlm.nih.gov/protein/289714736?report=genbank&log$=protalign&blast_rank=2&RID=0" >gi|289714736|gb|EFD78748.1|</a><a name=289714736></a> conserved hypothetical protein [Mycobacterium tuberculosis T85]
<a title="Show report for EGE49663" href="http://www.ncbi.nlm.nih.gov/protein/326902730?report=genbank&log$=protalign&blast_rank=2&RID=0" >gi|326902730|gb|EGE49663.1|</a><a name=326902730></a> hypothetical protein TBPG_00580 [Mycobacterium tuberculosis W-148]
Length=94
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/94 (99%), Positives = 93/94 (99%), Gaps = 0/94 (0%)
Query 1 MGGPFDADAEAHFDEVAEAFAKLTNVDRDVGVDLEKELCMTVEADDRSDALVTRRLLPRV 60
MGGPFDADAEAHFDEVAEAFAKLTNVDRDVGVDLEKELCMTVEADDRSDALV RRLLPRV
Sbjct 1 MGGPFDADAEAHFDEVAEAFAKLTNVDRDVGVDLEKELCMTVEADDRSDALVARRLLPRV 60
Query 61 PRCIPLAARLAPGTIGCPSFWNPIATGGASRQAL 94
PRCIPLAARLAPGTIGCPSFWNPIATGGASRQAL
Sbjct 61 PRCIPLAARLAPGTIGCPSFWNPIATGGASRQAL 94
><a title="Show report for YP_004746491" href="http://www.ncbi.nlm.nih.gov/protein/340628039?report=genbank&log$=protalign&blast_rank=3&RID=0" >gi|340628039|ref|YP_004746491.1|</a><a name=340628039></a> hypothetical protein MCAN_30721 [Mycobacterium canettii CIPT
140010059]
<a title="Show report for CCC45403" href="http://www.ncbi.nlm.nih.gov/protein/340006229?report=genbank&log$=protalign&blast_rank=3&RID=0" >gi|340006229|emb|CCC45403.1|</a><a name=340006229></a> hypothetical protein MCAN_30721 [Mycobacterium canettii CIPT
140010059]
Length=94
Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/93 (98%), Positives = 91/93 (98%), Gaps = 0/93 (0%)
Query 1 MGGPFDADAEAHFDEVAEAFAKLTNVDRDVGVDLEKELCMTVEADDRSDALVTRRLLPRV 60
MGGPFDADAEAHFDEVAEAFAKLTNVDRDVGVDLEKELCMTVEADDRSDALVTRRLLPRV
Sbjct 1 MGGPFDADAEAHFDEVAEAFAKLTNVDRDVGVDLEKELCMTVEADDRSDALVTRRLLPRV 60
Query 61 PRCIPLAARLAPGTIGCPSFWNPIATGGASRQA 93
PRCIPLAARLAPGTIGCPS WNPIATG ASRQA
Sbjct 61 PRCIPLAARLAPGTIGCPSCWNPIATGRASRQA 93
><a title="Show report for XP_001734798" href="http://www.ncbi.nlm.nih.gov/protein/167378432?report=genbank&log$=protalign&blast_rank=4&RID=0" >gi|167378432|ref|XP_001734798.1|</a><a name=167378432></a> NMDA receptor-regulated protein [Entamoeba dispar SAW760]
<a title="Show report for EDR29028" href="http://www.ncbi.nlm.nih.gov/protein/165903520?report=genbank&log$=protalign&blast_rank=4&RID=0" >gi|165903520|gb|EDR29028.1|</a><a name=165903520></a> NMDA receptor-regulated protein, putative [Entamoeba dispar SAW760]
Length=601
Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats.
Identities = 19/49 (39%), Positives = 30/49 (62%), Gaps = 2/49 (4%)
Query 10 EAHFDEVAEAFAKLTNVDRDVGVDLEKEL-CMTVEADDRSDALVTRRLL 57
E H++E A+AF +L ++DR +++EL C+ V+ D A TR LL
Sbjct 120 EKHYEEAAKAFKRLVSLDR-TNFGIQRELYCLQVQNGDYKGAFETRSLL 167
><a title="Show report for XP_648732" href="http://www.ncbi.nlm.nih.gov/protein/67465095?report=genbank&log$=protalign&blast_rank=5&RID=0" >gi|67465095|ref|XP_648732.1|</a><a name=67465095></a> hypothetical protein [Entamoeba histolytica HM-1:IMSS]
<a title="Show report for EAL43349" href="http://www.ncbi.nlm.nih.gov/protein/56464986?report=genbank&log$=protalign&blast_rank=5&RID=0" >gi|56464986|gb|EAL43349.1|</a><a name=56464986></a> hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length=601
Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats.
Identities = 19/49 (39%), Positives = 30/49 (62%), Gaps = 2/49 (4%)
Query 10 EAHFDEVAEAFAKLTNVDRDVGVDLEKEL-CMTVEADDRSDALVTRRLL 57
E H++E A+AF +L ++DR +++EL C+ V+ D A TR LL
Sbjct 120 EKHYEEAAKAFKRLVSLDR-TNFGIQRELYCLQVQNGDYKGAFETRSLL 167
Lambda K H
0.321 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127354591080
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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