BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3048c Length=324 Score E Sequences producing significant alignments: (Bits) Value gi|15842613|ref|NP_337650.1| ribonucleotide-diphosphate reductas... 666 0.0 gi|339633056|ref|YP_004724698.1| ribonucleoside-diphosphate redu... 664 0.0 gi|183981661|ref|YP_001849952.1| ribonucleoside-diphosphate redu... 647 0.0 gi|118617484|ref|YP_905816.1| ribonucleotide-diphosphate reducta... 645 0.0 gi|240169547|ref|ZP_04748206.1| ribonucleoside-diphosphate reduc... 645 0.0 gi|296171158|ref|ZP_06852606.1| ribonucleotide-diphosphate reduc... 637 0.0 gi|254820788|ref|ZP_05225789.1| ribonucleotide-diphosphate reduc... 636 1e-180 gi|342858107|ref|ZP_08714762.1| ribonucleotide-diphosphate reduc... 630 6e-179 gi|315445193|ref|YP_004078072.1| ribonucleoside-diphosphate redu... 630 7e-179 gi|145224865|ref|YP_001135543.1| ribonucleotide-diphosphate redu... 630 1e-178 gi|15827930|ref|NP_302193.1| ribonucleotide-diphosphate reductas... 629 2e-178 gi|41409193|ref|NP_962029.1| ribonucleotide-diphosphate reductas... 629 2e-178 gi|118465359|ref|YP_883075.1| ribonucleotide-diphosphate reducta... 627 6e-178 gi|108798796|ref|YP_638993.1| ribonucleotide-diphosphate reducta... 626 1e-177 gi|336459260|gb|EGO38205.1| ribonucleotide reductase, beta subun... 626 2e-177 gi|254776333|ref|ZP_05217849.1| ribonucleotide-diphosphate reduc... 624 6e-177 gi|120403054|ref|YP_952883.1| ribonucleotide-diphosphate reducta... 622 3e-176 gi|118469232|ref|YP_886661.1| ribonucleotide-diphosphate reducta... 615 2e-174 gi|333991420|ref|YP_004524034.1| ribonucleoside-diphosphate redu... 612 2e-173 gi|333921308|ref|YP_004494889.1| ribonucleoside-diphosphate redu... 608 5e-172 gi|51247866|pdb|1UZR|A Chain A, Crystal Structure Of The Class I... 605 2e-171 gi|336322017|ref|YP_004601985.1| ribonucleoside-diphosphate redu... 599 2e-169 gi|169630485|ref|YP_001704134.1| ribonucleotide-diphosphate redu... 598 3e-169 gi|229818600|ref|YP_002880126.1| Ribonucleoside-diphosphate redu... 598 5e-169 gi|325675841|ref|ZP_08155525.1| ribonucleotide-diphosphate reduc... 598 5e-169 gi|332671991|ref|YP_004454999.1| ribonucleoside-diphosphate redu... 597 7e-169 gi|226365904|ref|YP_002783687.1| ribonucleotide-diphosphate redu... 597 8e-169 gi|312140539|ref|YP_004007875.1| ribonucleoside-diphosphate redu... 597 9e-169 gi|111023403|ref|YP_706375.1| ribonucleotide-diphosphate reducta... 595 4e-168 gi|296128314|ref|YP_003635564.1| Ribonucleoside-diphosphate redu... 593 1e-167 gi|54026269|ref|YP_120511.1| ribonucleotide-diphosphate reductas... 593 1e-167 gi|326381484|ref|ZP_08203178.1| Ribonucleoside-diphosphate reduc... 588 5e-166 gi|262203177|ref|YP_003274385.1| ribonucleoside-diphosphate redu... 587 7e-166 gi|343926904|ref|ZP_08766397.1| ribonucleoside-diphosphate reduc... 587 8e-166 gi|226305840|ref|YP_002765800.1| ribonucleoside-diphosphate redu... 585 4e-165 gi|296140644|ref|YP_003647887.1| ribonucleoside-diphosphate redu... 581 4e-164 gi|269794349|ref|YP_003313804.1| ribonucleoside-diphosphate redu... 576 1e-162 gi|256832970|ref|YP_003161697.1| Ribonucleoside-diphosphate redu... 571 5e-161 gi|334337743|ref|YP_004542895.1| ribonucleoside-diphosphate redu... 568 4e-160 gi|269957220|ref|YP_003327009.1| Ribonucleoside-diphosphate redu... 567 7e-160 gi|119961248|ref|YP_948075.1| ribonucleotide-diphosphate reducta... 559 2e-157 gi|325963521|ref|YP_004241427.1| ribonucleoside-diphosphate redu... 558 4e-157 gi|116670901|ref|YP_831834.1| ribonucleotide-diphosphate reducta... 558 4e-157 gi|220912864|ref|YP_002488173.1| ribonucleotide-diphosphate redu... 556 2e-156 gi|317506846|ref|ZP_07964618.1| ribonucleotide reductase [Segnil... 556 2e-156 gi|163842202|ref|YP_001626607.1| ribonucleotide-diphosphate redu... 555 3e-156 gi|296393703|ref|YP_003658587.1| ribonucleoside-diphosphate redu... 555 4e-156 gi|323359290|ref|YP_004225686.1| ribonucleotide reductase, beta ... 550 9e-155 gi|319948549|ref|ZP_08022680.1| ribonucleotide-diphosphate reduc... 547 7e-154 gi|225351964|ref|ZP_03742987.1| hypothetical protein BIFPSEUDO_0... 544 6e-153 >gi|15842613|ref|NP_337650.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis CDC1551] gi|31794226|ref|NP_856719.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium bovis AF2122/97] gi|57117051|ref|YP_177921.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium tuberculosis H37Rv] 80 more sequence titles Length=324 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/324 (99%), Positives = 324/324 (100%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL Sbjct 1 MTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST Sbjct 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAVVTEDDDWDF Sbjct 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 >gi|339633056|ref|YP_004724698.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium africanum GM041182] gi|339332412|emb|CCC28125.1| ribonucleoside-diphosphate reductase (beta chain) NRDF2 (ribonucleotide reductase small subunit) [Mycobacterium africanum GM041182] Length=324 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/324 (99%), Positives = 324/324 (100%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL Sbjct 1 MTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST Sbjct 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 AEIDDAFRWSEENR+LQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 AEIDDAFRWSEENRSLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAVVTEDDDWDF Sbjct 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 >gi|183981661|ref|YP_001849952.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2 [Mycobacterium marinum M] gi|183174987|gb|ACC40097.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2 [Mycobacterium marinum M] Length=324 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/324 (96%), Positives = 318/324 (99%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +TGNAKLIDRVSAINWNR+QDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL Sbjct 1 MTGNAKLIDRVSAINWNRVQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST Sbjct 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 AEIDDAFRWSEEN NLQRKAEIVL+YYRGD+PLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 AEIDDAFRWSEENSNLQRKAEIVLEYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLA D+ R ELKDYTYELLFELYDNEVE Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVE 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAVVT+D+DWDF Sbjct 301 FFSGSGSSYVIGKAVVTQDEDWDF 324 >gi|118617484|ref|YP_905816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium ulcerans Agy99] gi|118569594|gb|ABL04345.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2 [Mycobacterium ulcerans Agy99] Length=324 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/324 (96%), Positives = 317/324 (98%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +TGNAKLIDRVSAINWNR+QDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL Sbjct 1 MTGNAKLIDRVSAINWNRVQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST Sbjct 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 AEIDDAFRWSEEN NLQRKAEIVL+YYRGD+PLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 AEIDDAFRWSEENSNLQRKAEIVLEYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLA D+ R ELKDYTYELLFELYDNEVE Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVE 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAV T+D+DWDF Sbjct 301 FFSGSGSSYVIGKAVATQDEDWDF 324 >gi|240169547|ref|ZP_04748206.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium kansasii ATCC 12478] Length=320 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/319 (98%), Positives = 316/319 (99%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 K+IDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTA EKQLTMRVF Sbjct 2 KVIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTANEKQLTMRVF 61 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD Sbjct 62 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 121 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 122 AFRWSEENPNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYKFQRGLALVD+V RAELKDYTYELLFELYDNEVEYTQDL Sbjct 182 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDEVKRAELKDYTYELLFELYDNEVEYTQDL 241 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAVVTED+DW+F Sbjct 302 GSSYVIGKAVVTEDEDWNF 320 >gi|296171158|ref|ZP_06852606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894294|gb|EFG74049.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium parascrofulaceum ATCC BAA-614] Length=324 Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/324 (95%), Positives = 316/324 (98%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +T N KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSND+PSW TLT+GEKQL Sbjct 1 MTENMKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDLPSWATLTSGEKQL 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHA+SYS IFSTLCST Sbjct 61 TMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 AEIDDAFRWSEEN NLQRKAEIV+QYY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 AEIDDAFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTADMIRLIIRDEAVHGYYIGYK+QRGLALVD+ RAELKDYTYELLFELYDNEVE Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKYQRGLALVDEAKRAELKDYTYELLFELYDNEVE 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAVVTED+DWDF Sbjct 301 FFSGSGSSYVIGKAVVTEDEDWDF 324 >gi|254820788|ref|ZP_05225789.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium intracellulare ATCC 13950] Length=324 Score = 636 bits (1641), Expect = 1e-180, Method: Compositional matrix adjust. Identities = 306/324 (95%), Positives = 315/324 (98%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +T N KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSND+PSWGTLTA EKQ+ Sbjct 1 MTENMKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTAHEKQM 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHA+SYS IFSTLCST Sbjct 61 TMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 AEIDDAFRWSEEN NLQRKAEIV+QYY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 AEIDDAFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDD + ELKDYTYELLFELYDNEVE Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDARKQELKDYTYELLFELYDNEVE 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAVVTED+DWDF Sbjct 301 FFSGSGSSYVIGKAVVTEDEDWDF 324 >gi|342858107|ref|ZP_08714762.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium colombiense CECT 3035] gi|342133811|gb|EGT86991.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium colombiense CECT 3035] Length=320 Score = 630 bits (1626), Expect = 6e-179, Method: Compositional matrix adjust. Identities = 303/319 (95%), Positives = 312/319 (98%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSND+PSWGTLTA EKQ+TMRVF Sbjct 2 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTAHEKQMTMRVF 61 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHA+SYS IFSTLCSTAEIDD Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 121 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKAEIV+QYY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYK+QRGLALVDD + ELKDYTYELLFELYDNEVEYTQDL Sbjct 182 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDDARKQELKDYTYELLFELYDNEVEYTQDL 241 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAVVTED+DWDF Sbjct 302 GSSYVIGKAVVTEDEDWDF 320 >gi|315445193|ref|YP_004078072.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium sp. Spyr1] gi|315263496|gb|ADU00238.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium sp. Spyr1] Length=320 Score = 630 bits (1626), Expect = 7e-179, Method: Compositional matrix adjust. Identities = 303/319 (95%), Positives = 311/319 (98%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KLIDRVSAINWNRLQD+KDAEVWDRLTGNFWLPEKVPVSNDIPSW TLTA EKQLTMRVF Sbjct 2 KLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDIPSWNTLTAHEKQLTMRVF 61 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHA+SYS IFSTLCST+EIDD Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTSEIDD 121 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKAEIV+QYY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYKFQ+GLAL DD TR ELKDYTYELLFELYDNEVEYTQDL Sbjct 182 TADMIRLIIRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDL 241 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAVVTED+DWDF Sbjct 302 GSSYVIGKAVVTEDEDWDF 320 >gi|145224865|ref|YP_001135543.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium gilvum PYR-GCK] gi|145217351|gb|ABP46755.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium gilvum PYR-GCK] Length=320 Score = 630 bits (1624), Expect = 1e-178, Method: Compositional matrix adjust. Identities = 302/319 (95%), Positives = 311/319 (98%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KLIDRVSAINWNRLQD+KDAEVWDRLTGNFWLPEKVPVSNDIPSW TLTA EKQLTMRVF Sbjct 2 KLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDIPSWNTLTAHEKQLTMRVF 61 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHA+SYS IFSTLCST+EIDD Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTSEIDD 121 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKAEIV+QYY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYKFQ+GLAL DD TR ELKDYTYELLFELYDNEVEYTQDL Sbjct 182 TADMIRLIIRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDL 241 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV+TED+DWDF Sbjct 302 GSSYVIGKAVITEDEDWDF 320 >gi|15827930|ref|NP_302193.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium leprae TN] gi|221230407|ref|YP_002503823.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium leprae Br4923] gi|14195114|sp|Q9CBQ2.1|RIR2_MYCLE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; AltName: Full=Ribonucleotide reductase small subunit gi|13093483|emb|CAC30684.1| ribonucleotide reductase small subunit [Mycobacterium leprae] gi|219933514|emb|CAR71826.1| ribonucleotide reductase small subunit [Mycobacterium leprae Br4923] Length=325 Score = 629 bits (1622), Expect = 2e-178, Method: Compositional matrix adjust. Identities = 303/324 (94%), Positives = 313/324 (97%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +TG KLIDRVSAINWN LQD+KDAEVWDRLTGNFWLPEKVPVSND+PSWGTLTA EKQL Sbjct 2 LTGKMKLIDRVSAINWNWLQDDKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTASEKQL 61 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTLCST Sbjct 62 TMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCST 121 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 AEID+AFRWSEEN NLQRKA+IV++YYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 122 AEIDEAFRWSEENNNLQRKAKIVMEYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 181 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGL LVDD RAELK+YTYELLFELYDNEVE Sbjct 182 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVE 241 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YTQDLYD VGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD Sbjct 242 YTQDLYDRVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 301 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAVVTED+DWDF Sbjct 302 FFSGSGSSYVIGKAVVTEDEDWDF 325 >gi|41409193|ref|NP_962029.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398013|gb|AAS05643.1| NrdG [Mycobacterium avium subsp. paratuberculosis K-10] Length=324 Score = 629 bits (1622), Expect = 2e-178, Method: Compositional matrix adjust. Identities = 302/324 (94%), Positives = 313/324 (97%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 ++ N KLIDRVSAINWNRLQD+KDAEVWDRLTGNFWLPEKVPVSND+ SW TLTA EKQ+ Sbjct 1 MSENMKLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDLQSWATLTAHEKQM 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHA+SYS IFSTLCST Sbjct 61 TMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 AEIDDAFRWSEEN NLQRKAEIV+QYY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 AEIDDAFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTADMIRLIIRDEAVHGYYIGYK+QRGLALVDD R ELKDYTYELLFELYDNEVE Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVE 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAVVTED+DWDF Sbjct 301 FFSGSGSSYVIGKAVVTEDEDWDF 324 >gi|118465359|ref|YP_883075.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium avium 104] gi|118166646|gb|ABK67543.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium avium 104] Length=324 Score = 627 bits (1618), Expect = 6e-178, Method: Compositional matrix adjust. Identities = 301/324 (93%), Positives = 313/324 (97%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 ++ N KLIDR+SAINWNRLQD+KDAEVWDRLTGNFWLPEKVPVSND+ SW TLTA EKQ+ Sbjct 1 MSENMKLIDRLSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDLQSWATLTAHEKQM 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHA+SYS IFSTLCST Sbjct 61 TMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 AEIDDAFRWSEEN NLQRKAEIV+QYY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 AEIDDAFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTADMIRLIIRDEAVHGYYIGYK+QRGLALVDD R ELKDYTYELLFELYDNEVE Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVE 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAVVTED+DWDF Sbjct 301 FFSGSGSSYVIGKAVVTEDEDWDF 324 >gi|108798796|ref|YP_638993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium sp. MCS] gi|119867913|ref|YP_937865.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium sp. KMS] gi|126434397|ref|YP_001070088.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium sp. JLS] gi|108769215|gb|ABG07937.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium sp. MCS] gi|119694002|gb|ABL91075.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium sp. KMS] gi|126234197|gb|ABN97597.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium sp. JLS] Length=320 Score = 626 bits (1615), Expect = 1e-177, Method: Compositional matrix adjust. Identities = 302/319 (95%), Positives = 310/319 (98%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KLIDRVSAINWNRLQD+KDAEVWDRLTGNFWLPEKVPVSNDIPSW TLTA EKQLTMRVF Sbjct 2 KLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDIPSWNTLTAHEKQLTMRVF 61 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHA+SYS IFSTLCSTAEIDD Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 121 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKAEIV+QYY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYKFQ+GLAL D T+AELKDYTYELLFELYDNEVEYTQDL Sbjct 182 TADMIRLIIRDEAVHGYYIGYKFQKGLALQDPATQAELKDYTYELLFELYDNEVEYTQDL 241 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YD VGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS Sbjct 242 YDSVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAVVTED+DWDF Sbjct 302 GSSYVIGKAVVTEDEDWDF 320 >gi|336459260|gb|EGO38205.1| ribonucleotide reductase, beta subunit [Mycobacterium avium subsp. paratuberculosis S397] Length=320 Score = 626 bits (1614), Expect = 2e-177, Method: Compositional matrix adjust. Identities = 301/319 (95%), Positives = 310/319 (98%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KLIDRVSAINWNRLQD+KDAEVWDRLTGNFWLPEKVPVSND+ SW TLTA EKQ+TMRVF Sbjct 2 KLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDLQSWATLTAHEKQMTMRVF 61 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHA+SYS IFSTLCSTAEIDD Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 121 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKAEIV+QYY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYK+QRGLALVDD R ELKDYTYELLFELYDNEVEYTQDL Sbjct 182 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDL 241 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAVVTED+DWDF Sbjct 302 GSSYVIGKAVVTEDEDWDF 320 >gi|254776333|ref|ZP_05217849.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium avium subsp. avium ATCC 25291] Length=320 Score = 624 bits (1609), Expect = 6e-177, Method: Compositional matrix adjust. Identities = 300/319 (95%), Positives = 310/319 (98%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KLIDRVSAINWNRLQD+KDAEVWDRLTGNFWLPEKVPVSND+ SW TLTA EKQ+T+RVF Sbjct 2 KLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSNDLQSWATLTAHEKQMTIRVF 61 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHA+SYS IFSTLCSTAEIDD Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 121 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKAEIV+QYY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 122 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 181 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYK+QRGLALVDD R ELKDYTYELLFELYDNEVEYTQDL Sbjct 182 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDL 241 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS Sbjct 242 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 301 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAVVTED+DWDF Sbjct 302 GSSYVIGKAVVTEDEDWDF 320 >gi|120403054|ref|YP_952883.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium vanbaalenii PYR-1] gi|119955872|gb|ABM12877.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Mycobacterium vanbaalenii PYR-1] Length=324 Score = 622 bits (1604), Expect = 3e-176, Method: Compositional matrix adjust. Identities = 300/319 (95%), Positives = 309/319 (97%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KLIDRVSAINWNRLQD+KDAEVW+RLTGNFWLPEKVPVSNDIPSW TLTA EKQLTMRVF Sbjct 6 KLIDRVSAINWNRLQDDKDAEVWERLTGNFWLPEKVPVSNDIPSWNTLTAHEKQLTMRVF 65 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHA+SYS IFSTLCSTAEIDD Sbjct 66 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAEIDD 125 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKAEIV+QYY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 126 AFRWSEENPNLQRKAEIVMQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYKFQ+GLAL + TR ELKDYTYELLFELYDNEVEYTQDL Sbjct 186 TADMIRLIIRDEAVHGYYIGYKFQKGLALESEATRQELKDYTYELLFELYDNEVEYTQDL 245 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS Sbjct 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TED+DWDF Sbjct 306 GSSYVIGKAVNTEDEDWDF 324 >gi|118469232|ref|YP_886661.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium smegmatis str. MC2 155] gi|118469934|ref|YP_885432.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium smegmatis str. MC2 155] gi|118170519|gb|ABK71415.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium smegmatis str. MC2 155] gi|118171221|gb|ABK72117.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium smegmatis str. MC2 155] Length=324 Score = 615 bits (1587), Expect = 2e-174, Method: Compositional matrix adjust. Identities = 298/319 (94%), Positives = 306/319 (96%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KLIDRVSAINWNRLQDEKDAEVW RLTGNFWLPEKVPVSNDI SW TLT EKQLTMRVF Sbjct 6 KLIDRVSAINWNRLQDEKDAEVWHRLTGNFWLPEKVPVSNDIQSWHTLTDNEKQLTMRVF 65 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDA+TPHEEAVLTNIAFMESVHAKSYS IFSTLCSTAEIDD Sbjct 66 TGLTLLDTIQGTVGAVSLIPDAVTPHEEAVLTNIAFMESVHAKSYSNIFSTLCSTAEIDD 125 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKA IV+QYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 126 AFRWSEENPNLQRKAAIVMQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYK+QRGLALVD+ + ELKDYTYELLFELYDNEVEYTQDL Sbjct 186 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDEEKKQELKDYTYELLFELYDNEVEYTQDL 245 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YD VGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSAL+PNADENHDFFSGS Sbjct 246 YDSVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALAPNADENHDFFSGS 305 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TED+DWDF Sbjct 306 GSSYVIGKAVNTEDEDWDF 324 >gi|333991420|ref|YP_004524034.1| ribonucleoside-diphosphate reductase (subunit beta) NrdF2 [Mycobacterium sp. JDM601] gi|333487388|gb|AEF36780.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2 [Mycobacterium sp. JDM601] Length=324 Score = 612 bits (1579), Expect = 2e-173, Method: Compositional matrix adjust. Identities = 293/319 (92%), Positives = 306/319 (96%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 +LIDRVSAINWNR+QD+KD EVWDRLTGNFWLPEKVPVSND+PSWGTLT EKQLTMRVF Sbjct 6 RLIDRVSAINWNRVQDDKDIEVWDRLTGNFWLPEKVPVSNDLPSWGTLTDEEKQLTMRVF 65 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHAKSYSQIFSTLCST EID+ Sbjct 66 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSQIFSTLCSTNEIDE 125 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKA IV+QYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR KLTN Sbjct 126 AFRWSEENGNLQRKAAIVMQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRGKLTN 185 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TAD+IRLIIRDEAVHGYYIGYKFQRGLA+ D+ RAELKDYTYELLFELYDNEVEYTQDL Sbjct 186 TADVIRLIIRDEAVHGYYIGYKFQRGLAMQDEAKRAELKDYTYELLFELYDNEVEYTQDL 245 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YD VGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPN DENHDFFSGS Sbjct 246 YDGVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNGDENHDFFSGS 305 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV+TED+DW+F Sbjct 306 GSSYVIGKAVITEDEDWEF 324 >gi|333921308|ref|YP_004494889.1| ribonucleoside-diphosphate reductase [Amycolicicoccus subflavus DQS3-9A1] gi|333483529|gb|AEF42089.1| Ribonucleoside-diphosphate reductase [Amycolicicoccus subflavus DQS3-9A1] Length=335 Score = 608 bits (1567), Expect = 5e-172, Method: Compositional matrix adjust. Identities = 293/322 (91%), Positives = 304/322 (95%), Gaps = 0/322 (0%) Query 3 GNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTM 62 G KL+ RVSAINWNR+ DEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLT EKQLTM Sbjct 14 GKVKLVSRVSAINWNRVPDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTDYEKQLTM 73 Query 63 RVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAE 122 RVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST + Sbjct 74 RVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTRD 133 Query 123 IDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAK 182 IDDAFRWSEEN NLQRKAEIV++YYRGD+PLKRKVASTLLESFLFYSGFYLPMYWSSRAK Sbjct 134 IDDAFRWSEENENLQRKAEIVMEYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAK 193 Query 183 LTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYT 242 LTNTADMIRLIIRDEAVHGYYIGYK+QRGL LV R ELKDYT+ELLFELYDNEVEYT Sbjct 194 LTNTADMIRLIIRDEAVHGYYIGYKYQRGLELVSPEKRQELKDYTFELLFELYDNEVEYT 253 Query 243 QDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFF 302 QDLYD VGL EDVKKFLRYNANKALMNLGYE LFP+DETDVNPAILSALSPNADENHDFF Sbjct 254 QDLYDGVGLAEDVKKFLRYNANKALMNLGYEPLFPKDETDVNPAILSALSPNADENHDFF 313 Query 303 SGSGSSYVIGKAVVTEDDDWDF 324 SGSGSSYVIGKAV TED+DWDF Sbjct 314 SGSGSSYVIGKAVNTEDEDWDF 335 >gi|51247866|pdb|1UZR|A Chain A, Crystal Structure Of The Class Ib Ribonucleotide Reductase R2f-2 Subunit From Mycobacterium Tuberculosis gi|51247867|pdb|1UZR|B Chain B, Crystal Structure Of The Class Ib Ribonucleotide Reductase R2f-2 Subunit From Mycobacterium Tuberculosis gi|51247868|pdb|1UZR|C Chain C, Crystal Structure Of The Class Ib Ribonucleotide Reductase R2f-2 Subunit From Mycobacterium Tuberculosis Length=296 Score = 605 bits (1561), Expect = 2e-171, Method: Compositional matrix adjust. Identities = 294/296 (99%), Positives = 295/296 (99%), Gaps = 0/296 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL Sbjct 1 MTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST Sbjct 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 AEIDDAFRWSEENRNLQRKAEIVLQ YRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 AEIDDAFRWSEENRNLQRKAEIVLQSYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE Sbjct 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNAD 296 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNAD Sbjct 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNAD 296 >gi|336322017|ref|YP_004601985.1| ribonucleoside-diphosphate reductase [Cellvibrio gilvus ATCC 13127] gi|336105598|gb|AEI13417.1| Ribonucleoside-diphosphate reductase [Cellvibrio gilvus ATCC 13127] Length=326 Score = 599 bits (1544), Expect = 2e-169, Method: Compositional matrix adjust. Identities = 289/323 (90%), Positives = 301/323 (94%), Gaps = 0/323 (0%) Query 2 TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLT 61 TG KLIDRVSAINWNRL+D+KDAEVWDRL GNFWLPEKVPVSNDI SW TLT EK LT Sbjct 4 TGKLKLIDRVSAINWNRLEDDKDAEVWDRLVGNFWLPEKVPVSNDIQSWATLTEAEKTLT 63 Query 62 MRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTA 121 MRVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTLCST Sbjct 64 MRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTK 123 Query 122 EIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRA 181 EID+AFRWSEEN NLQRKAEIV++YYRGD PLKRKVASTLLESFLFYSGFYLPMYWSSRA Sbjct 124 EIDEAFRWSEENVNLQRKAEIVMKYYRGDSPLKRKVASTLLESFLFYSGFYLPMYWSSRA 183 Query 182 KLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEY 241 KLTNTAD+IRLIIRDEAVHGYYIGYKFQ+GL + R ELKDYT+ELLFELYDNEVEY Sbjct 184 KLTNTADLIRLIIRDEAVHGYYIGYKFQKGLEKLSQTERDELKDYTFELLFELYDNEVEY 243 Query 242 TQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF 301 TQDLYD VGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF Sbjct 244 TQDLYDGVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF 303 Query 302 FSGSGSSYVIGKAVVTEDDDWDF 324 FSGSGSSYVIGKAV TED+DW+F Sbjct 304 FSGSGSSYVIGKAVNTEDEDWEF 326 >gi|169630485|ref|YP_001704134.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium abscessus ATCC 19977] gi|169242452|emb|CAM63480.1| Probable ribonucleoside-diphosphate reductase beta subunit [Mycobacterium abscessus] Length=324 Score = 598 bits (1543), Expect = 3e-169, Method: Compositional matrix adjust. Identities = 287/319 (90%), Positives = 303/319 (95%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KL+ RVSAINWNR+ DEKDAEVWDRLTGNFWLPEKVPVSNDI SW TLT EKQLTMRVF Sbjct 6 KLVSRVSAINWNRVPDEKDAEVWDRLTGNFWLPEKVPVSNDIQSWNTLTDHEKQLTMRVF 65 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDA+TPHEEAV TNIAFMESVHAKSYS IFSTLCST EIDD Sbjct 66 TGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDD 125 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKAEIV++YYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 126 AFRWSEENPNLQRKAEIVMEYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYKFQRGL VD+ RAE+K+YTY+LL+ELY+NE +YT+DL Sbjct 186 TADMIRLIIRDEAVHGYYIGYKFQRGLERVDEAKRAEIKEYTYDLLYELYENETDYTEDL 245 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPR+ETDVNPAILSALSPNADENHDFFSGS Sbjct 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPREETDVNPAILSALSPNADENHDFFSGS 305 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TED+DWDF Sbjct 306 GSSYVIGKAVNTEDEDWDF 324 >gi|229818600|ref|YP_002880126.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM 12333] gi|229564513|gb|ACQ78364.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM 12333] Length=326 Score = 598 bits (1541), Expect = 5e-169, Method: Compositional matrix adjust. Identities = 288/323 (90%), Positives = 301/323 (94%), Gaps = 0/323 (0%) Query 2 TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLT 61 TG KL+ RVSAINWNRLQDEKD EVW+RL NFWLPEKVPVSNDIPSWGTLT EK LT Sbjct 4 TGKLKLVSRVSAINWNRLQDEKDLEVWNRLVNNFWLPEKVPVSNDIPSWGTLTDVEKTLT 63 Query 62 MRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTA 121 MRVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTLCST Sbjct 64 MRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTR 123 Query 122 EIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRA 181 EIDDAFRWSEEN NLQRKAEIV++YYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRA Sbjct 124 EIDDAFRWSEENSNLQRKAEIVMEYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRA 183 Query 182 KLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEY 241 KLTNTAD+IRLIIRDEAVHGYYIGYKFQRGL + R E+K YTYELLFELY+NEV+Y Sbjct 184 KLTNTADLIRLIIRDEAVHGYYIGYKFQRGLEALAPEQREEIKSYTYELLFELYENEVQY 243 Query 242 TQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF 301 T+DLYDEVGLTEDVKKFLRYNANKALMNLGYEALFP+DETDVNPAIL+ALSPNADENHDF Sbjct 244 TEDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPKDETDVNPAILAALSPNADENHDF 303 Query 302 FSGSGSSYVIGKAVVTEDDDWDF 324 FSGSGSSYVIGKAV TEDDDWDF Sbjct 304 FSGSGSSYVIGKAVNTEDDDWDF 326 >gi|325675841|ref|ZP_08155525.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi ATCC 33707] gi|325553812|gb|EGD23490.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi ATCC 33707] Length=335 Score = 598 bits (1541), Expect = 5e-169, Method: Compositional matrix adjust. Identities = 286/319 (90%), Positives = 303/319 (95%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KL+DRVSAINWNR+ DEKD+EVWDRLTGNFWLPEKVPVSNDI SW TLT E+QLTMRVF Sbjct 17 KLVDRVSAINWNRVPDEKDSEVWDRLTGNFWLPEKVPVSNDIQSWATLTPNEQQLTMRVF 76 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDA+TPHEEAVLTNIAFMESVHAKSYSQIFSTLC+T EIDD Sbjct 77 TGLTLLDTIQGTVGAVSLIPDAVTPHEEAVLTNIAFMESVHAKSYSQIFSTLCTTREIDD 136 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKA+IVL YY+GD+PLKRKVASTLLESFLFYSGFYLPMYW+SRAKLTN Sbjct 137 AFRWSEENPNLQRKAQIVLDYYKGDDPLKRKVASTLLESFLFYSGFYLPMYWASRAKLTN 196 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TAD+IRLIIRDEAVHGYYIGYK+QRGL V + R ELK+YT+ELLFELYDNEVEYTQDL Sbjct 197 TADVIRLIIRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDL 256 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYE LFP+DETDVNPAILSALSPNADENHDFFSGS Sbjct 257 YDEVGLTEDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGS 316 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TEDDDWDF Sbjct 317 GSSYVIGKAVNTEDDDWDF 335 >gi|332671991|ref|YP_004454999.1| ribonucleoside-diphosphate reductase [Cellulomonas fimi ATCC 484] gi|332341029|gb|AEE47612.1| Ribonucleoside-diphosphate reductase [Cellulomonas fimi ATCC 484] Length=326 Score = 597 bits (1540), Expect = 7e-169, Method: Compositional matrix adjust. Identities = 289/323 (90%), Positives = 301/323 (94%), Gaps = 0/323 (0%) Query 2 TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLT 61 TG KLIDRVSAINWNRL+DEKDAEVWDRL GNFWLPEKVPVSNDI SW TLT EK LT Sbjct 4 TGKLKLIDRVSAINWNRLEDEKDAEVWDRLVGNFWLPEKVPVSNDIQSWATLTEEEKTLT 63 Query 62 MRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTA 121 MRVFTGLT+LDTIQGTVGAVSLIPDA+TPHEEAV TNIAFMESVHAKSYS IFSTLCST Sbjct 64 MRVFTGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTR 123 Query 122 EIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRA 181 EID+AFRWSEEN NLQRKAEIV++YY+GD PLKRKVASTLLESFLFYSGFYLPMYWSSRA Sbjct 124 EIDEAFRWSEENVNLQRKAEIVMKYYKGDSPLKRKVASTLLESFLFYSGFYLPMYWSSRA 183 Query 182 KLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEY 241 KLTNTAD+IRLIIRDEAVHGYYIGYKFQ+GL + R ELKDYT+ELLFELYDNEVEY Sbjct 184 KLTNTADLIRLIIRDEAVHGYYIGYKFQKGLEKLSPEERQELKDYTFELLFELYDNEVEY 243 Query 242 TQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF 301 TQDLYD VGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF Sbjct 244 TQDLYDGVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF 303 Query 302 FSGSGSSYVIGKAVVTEDDDWDF 324 FSGSGSSYVIGKAV TED+DWDF Sbjct 304 FSGSGSSYVIGKAVNTEDEDWDF 326 >gi|226365904|ref|YP_002783687.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus opacus B4] gi|226244394|dbj|BAH54742.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus opacus B4] Length=321 Score = 597 bits (1539), Expect = 8e-169, Method: Compositional matrix adjust. Identities = 285/320 (90%), Positives = 303/320 (95%), Gaps = 0/320 (0%) Query 5 AKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRV 64 KL+ RVSAINWNR+QDEKDAEVWDRL GNFWLPEKVPVSNDIPSWGTLTA EKQLTMRV Sbjct 2 VKLVSRVSAINWNRVQDEKDAEVWDRLVGNFWLPEKVPVSNDIPSWGTLTAQEKQLTMRV 61 Query 65 FTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEID 124 FTGLT+LDTIQGTVGAVSLIPDA+TPHEEAV TNIAFMESVHAKSYS IFSTLCST +ID Sbjct 62 FTGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTRDID 121 Query 125 DAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLT 184 DAFRWSEEN NLQRKAEIV+ YY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLT Sbjct 122 DAFRWSEENPNLQRKAEIVMDYYQGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLT 181 Query 185 NTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQD 244 NTAD+IRLIIRDEAVHGYYIGYK+Q+GL + + R +LK+YT+ELLFELYDNEV+YTQD Sbjct 182 NTADLIRLIIRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQD 241 Query 245 LYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSG 304 LYDEVGLTEDVKKFLRYNANKALMNLGYE LFP+DETDVNPAILSALSPNADENHDFFSG Sbjct 242 LYDEVGLTEDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSG 301 Query 305 SGSSYVIGKAVVTEDDDWDF 324 SGSSYVIGKAV TED+DWDF Sbjct 302 SGSSYVIGKAVNTEDEDWDF 321 >gi|312140539|ref|YP_004007875.1| ribonucleoside-diphosphate reductase nrdf [Rhodococcus equi 103S] gi|311889878|emb|CBH49195.1| ribonucleoside-diphosphate reductase NrdF [Rhodococcus equi 103S] Length=329 Score = 597 bits (1539), Expect = 9e-169, Method: Compositional matrix adjust. Identities = 286/319 (90%), Positives = 303/319 (95%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KL+DRVSAINWNR+ DEKD+EVWDRLTGNFWLPEKVPVSNDI SW TLT E+QLTMRVF Sbjct 11 KLVDRVSAINWNRVPDEKDSEVWDRLTGNFWLPEKVPVSNDIQSWATLTPNEQQLTMRVF 70 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDA+TPHEEAVLTNIAFMESVHAKSYSQIFSTLC+T EIDD Sbjct 71 TGLTLLDTIQGTVGAVSLIPDAVTPHEEAVLTNIAFMESVHAKSYSQIFSTLCTTREIDD 130 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKA+IVL YY+GD+PLKRKVASTLLESFLFYSGFYLPMYW+SRAKLTN Sbjct 131 AFRWSEENPNLQRKAQIVLDYYKGDDPLKRKVASTLLESFLFYSGFYLPMYWASRAKLTN 190 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TAD+IRLIIRDEAVHGYYIGYK+QRGL V + R ELK+YT+ELLFELYDNEVEYTQDL Sbjct 191 TADVIRLIIRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDL 250 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYE LFP+DETDVNPAILSALSPNADENHDFFSGS Sbjct 251 YDEVGLTEDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGS 310 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TEDDDWDF Sbjct 311 GSSYVIGKAVNTEDDDWDF 329 >gi|111023403|ref|YP_706375.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus jostii RHA1] gi|110822933|gb|ABG98217.1| ribonucleotide reductase [Rhodococcus jostii RHA1] Length=321 Score = 595 bits (1533), Expect = 4e-168, Method: Compositional matrix adjust. Identities = 284/320 (89%), Positives = 302/320 (95%), Gaps = 0/320 (0%) Query 5 AKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRV 64 KL+ RVSAINWNR+QDEKDAEVWDRL GNFWLPEKVPVSNDIPSWGTLT EKQLTMRV Sbjct 2 VKLVSRVSAINWNRVQDEKDAEVWDRLVGNFWLPEKVPVSNDIPSWGTLTPQEKQLTMRV 61 Query 65 FTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEID 124 FTGLT+LDTIQGTVGAVSLIPDA+TPHEEAV TNIAFMESVHAKSYS IFSTLCST +ID Sbjct 62 FTGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTRDID 121 Query 125 DAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLT 184 DAFRWSEEN NLQRKAEIV+ YY+GDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLT Sbjct 122 DAFRWSEENPNLQRKAEIVMDYYQGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLT 181 Query 185 NTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQD 244 NTAD+IRLIIRDEAVHGYYIGYK+Q+GL + + R +LK+YT+ELLFELYDNEV+YTQD Sbjct 182 NTADLIRLIIRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQD 241 Query 245 LYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSG 304 LYDEVGLTEDVKKFLRYNANKALMNLGYE LFP+DETDVNPAILSALSPNADENHDFFSG Sbjct 242 LYDEVGLTEDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSG 301 Query 305 SGSSYVIGKAVVTEDDDWDF 324 SGSSYVIGKAV TED+DWDF Sbjct 302 SGSSYVIGKAVNTEDEDWDF 321 >gi|296128314|ref|YP_003635564.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM 20109] gi|296020129|gb|ADG73365.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM 20109] Length=326 Score = 593 bits (1530), Expect = 1e-167, Method: Compositional matrix adjust. Identities = 286/323 (89%), Positives = 299/323 (93%), Gaps = 0/323 (0%) Query 2 TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLT 61 TG KL+DRVSAINWNRLQDEKD EVWDRL GNFWLPEKVPVSNDI SW TLT EK +T Sbjct 4 TGKLKLVDRVSAINWNRLQDEKDLEVWDRLVGNFWLPEKVPVSNDIQSWATLTEAEKTMT 63 Query 62 MRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTA 121 RVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTL ST Sbjct 64 TRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLISTK 123 Query 122 EIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRA 181 EID+AFRWSEEN NLQRKAEIVL YYRGD+PLKRKVAST+LESFLFYSGFY PMYW+SRA Sbjct 124 EIDEAFRWSEENPNLQRKAEIVLDYYRGDDPLKRKVASTMLESFLFYSGFYAPMYWASRA 183 Query 182 KLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEY 241 KLTNTAD+IRLIIRDEAVHGYYIGYKFQ+GL V + RAELKDYT+ LLFELYDNEVEY Sbjct 184 KLTNTADLIRLIIRDEAVHGYYIGYKFQKGLERVSEAERAELKDYTFNLLFELYDNEVEY 243 Query 242 TQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF 301 TQDLYDE+GLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAIL+ALSPNADENHDF Sbjct 244 TQDLYDELGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILAALSPNADENHDF 303 Query 302 FSGSGSSYVIGKAVVTEDDDWDF 324 FSGSGSSYVIGKAV TEDDDWDF Sbjct 304 FSGSGSSYVIGKAVNTEDDDWDF 326 >gi|54026269|ref|YP_120511.1| ribonucleotide-diphosphate reductase subunit beta [Nocardia farcinica IFM 10152] gi|54017777|dbj|BAD59147.1| putative ribonucleoside-diphosphate reductase beta subunit [Nocardia farcinica IFM 10152] Length=320 Score = 593 bits (1528), Expect = 1e-167, Method: Compositional matrix adjust. Identities = 286/319 (90%), Positives = 300/319 (95%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KLIDRVSAINWNR+ DEKDAEVW RLTGNFWLPEKVPVSNDIPSW TLT E+QLTMRVF Sbjct 2 KLIDRVSAINWNRVPDEKDAEVWARLTGNFWLPEKVPVSNDIPSWNTLTPHEQQLTMRVF 61 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYS IFSTLCST EID+ Sbjct 62 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTKEIDE 121 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEENRNLQRKAEIVL YY+GD+PLKRKVASTLLESFLFYSGFYLPM+WSSRAKLTN Sbjct 122 AFRWSEENRNLQRKAEIVLDYYQGDDPLKRKVASTLLESFLFYSGFYLPMHWSSRAKLTN 181 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYK+QRGL V + R ELK+YT+ELL+ELY+NEVEYTQDL Sbjct 182 TADMIRLIIRDEAVHGYYIGYKYQRGLEQVSEAEREELKNYTFELLYELYENEVEYTQDL 241 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVK FLRYNANKALMNLGYE LFP DET VNPAILSALSPNADENHDFFSGS Sbjct 242 YDEVGLTEDVKTFLRYNANKALMNLGYEGLFPADETRVNPAILSALSPNADENHDFFSGS 301 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TED+DWDF Sbjct 302 GSSYVIGKAVNTEDEDWDF 320 >gi|326381484|ref|ZP_08203178.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL B-59395] gi|326199731|gb|EGD56911.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL B-59395] Length=333 Score = 588 bits (1515), Expect = 5e-166, Method: Compositional matrix adjust. Identities = 281/319 (89%), Positives = 300/319 (95%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KL++RVSAINWNR+QD+KDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLT EK LTMRVF Sbjct 15 KLVNRVSAINWNRVQDDKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTDYEKTLTMRVF 74 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGA+SLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTLCST EID+ Sbjct 75 TGLTLLDTIQGTVGAISLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDE 134 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN LQRKA+IV+ YYRGD+PLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 135 AFRWSEENEYLQRKAQIVMDYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 194 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYK+QRGL + R ELKDYT+ELLFELYDNE +YT+ L Sbjct 195 TADMIRLIIRDEAVHGYYIGYKYQRGLEVQTPERRQELKDYTFELLFELYDNETDYTEAL 254 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGL+EDVKKFLRYNANKALMNLGYEA+FP+DETDVNPAILSALSPNADENHDFFSGS Sbjct 255 YDEVGLSEDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENHDFFSGS 314 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TED+DWDF Sbjct 315 GSSYVIGKAVNTEDEDWDF 333 >gi|262203177|ref|YP_003274385.1| ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM 43247] gi|262086524|gb|ACY22492.1| Ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM 43247] Length=334 Score = 587 bits (1514), Expect = 7e-166, Method: Compositional matrix adjust. Identities = 282/319 (89%), Positives = 298/319 (94%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KL+ RVSAINWNR+ DEKDAEVWDRLTGNFWLPEKVPVSNDIPSW TLT EKQLTMRVF Sbjct 16 KLVSRVSAINWNRVPDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWNTLTEYEKQLTMRVF 75 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDA TPHEEAVLTNIAFMESVHAKSYS IFSTLCST EID+ Sbjct 76 TGLTLLDTIQGTVGAVSLIPDATTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTKEIDE 135 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN LQRKA+IV+ YYRGD+PLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 136 AFRWSEENDQLQRKAQIVMDYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 195 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TAD+IRLIIRDEAVHGYYIGYK+QRGL + R ELKDYT+ELLFELYDNE +YT+ L Sbjct 196 TADLIRLIIRDEAVHGYYIGYKYQRGLEVQTAERRQELKDYTFELLFELYDNESDYTEAL 255 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYEA+FP+DETDVNPAILSALSPNADENHDFFSGS Sbjct 256 YDEVGLTEDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENHDFFSGS 315 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TED+DWDF Sbjct 316 GSSYVIGKAVNTEDEDWDF 334 >gi|343926904|ref|ZP_08766397.1| ribonucleoside-diphosphate reductase beta chain [Gordonia alkanivorans NBRC 16433] gi|343763264|dbj|GAA13323.1| ribonucleoside-diphosphate reductase beta chain [Gordonia alkanivorans NBRC 16433] Length=334 Score = 587 bits (1513), Expect = 8e-166, Method: Compositional matrix adjust. Identities = 282/319 (89%), Positives = 297/319 (94%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KL+ RVSAINWNR+ DEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLT EKQLTMRVF Sbjct 16 KLVSRVSAINWNRVPDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTEYEKQLTMRVF 75 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDA TPHEEAVLTNIAFMESVHAKSYS IFSTLCST EID+ Sbjct 76 TGLTLLDTIQGTVGAVSLIPDATTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTKEIDE 135 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN LQRKA IV+ YYRG++PLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 136 AFRWSEENEQLQRKARIVMDYYRGEDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 195 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TAD+IRLIIRDEAVHGYYIGYK+QRGL R ELKDYT+ELLFELYDNE +YT+ L Sbjct 196 TADLIRLIIRDEAVHGYYIGYKYQRGLETQTPERRQELKDYTFELLFELYDNESDYTETL 255 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGLTEDVKKFLRYNANKALMNLGYEA+FP+DETDVNPAILSALSPNADENHDFFSGS Sbjct 256 YDEVGLTEDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENHDFFSGS 315 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TED+DWDF Sbjct 316 GSSYVIGKAVNTEDEDWDF 334 >gi|226305840|ref|YP_002765800.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus erythropolis PR4] gi|229493405|ref|ZP_04387194.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus erythropolis SK121] gi|226184957|dbj|BAH33061.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus erythropolis PR4] gi|229319721|gb|EEN85553.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus erythropolis SK121] Length=321 Score = 585 bits (1507), Expect = 4e-165, Method: Compositional matrix adjust. Identities = 280/319 (88%), Positives = 298/319 (94%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KL+ RVSAINWNR+QDEKDAEVWDRL NFWLPEKVPVSNDIPSWGTLTA E+QLTMRVF Sbjct 3 KLVSRVSAINWNRVQDEKDAEVWDRLVSNFWLPEKVPVSNDIPSWGTLTAQEQQLTMRVF 62 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDA+TPHEEAV TNIAFMESVHAKSYS IFSTLCST +IDD Sbjct 63 TGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTPDIDD 122 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN NLQRKA+IVL YY G+ PLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 123 AFRWSEENPNLQRKAQIVLDYYNGESPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 182 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TAD+IRLIIRDEAVHGYYIGYK+Q+GL + + R ELK+YT+ELLFELY+NEV+YTQDL Sbjct 183 TADLIRLIIRDEAVHGYYIGYKYQKGLEQLTEAEREELKNYTFELLFELYENEVDYTQDL 242 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YD VGLTEDVKKFLRYNANKAL NLGYE LFP+DETDVNPAILSALSPNADENHDFFSGS Sbjct 243 YDGVGLTEDVKKFLRYNANKALNNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGS 302 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TEDDDWDF Sbjct 303 GSSYVIGKAVNTEDDDWDF 321 >gi|296140644|ref|YP_003647887.1| ribonucleoside-diphosphate reductase [Tsukamurella paurometabola DSM 20162] gi|296028778|gb|ADG79548.1| Ribonucleoside-diphosphate reductase [Tsukamurella paurometabola DSM 20162] Length=334 Score = 581 bits (1498), Expect = 4e-164, Method: Compositional matrix adjust. Identities = 280/319 (88%), Positives = 295/319 (93%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KL+ RVSAINWNR+ DEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLT EKQLTMRVF Sbjct 16 KLVSRVSAINWNRVPDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTDYEKQLTMRVF 75 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDA TPHEEAVLTNIAFMESVHAKSYS IFSTLCST EIDD Sbjct 76 TGLTLLDTIQGTVGAVSLIPDATTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTREIDD 135 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWSEEN LQRKA+IV+ +YRGD+PLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 136 AFRWSEENEQLQRKAQIVMDFYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 195 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TADMIRLIIRDEAVHGYYIGYK+QRGL R ELKDYT++LL ELY NE +YT+ L Sbjct 196 TADMIRLIIRDEAVHGYYIGYKYQRGLETESPQRREELKDYTFDLLMELYANEEDYTESL 255 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YDEVGL+EDVKKFLRYNANKALMNLGYEALFP+D TDVNPAILSALSPNADENHDFFSGS Sbjct 256 YDEVGLSEDVKKFLRYNANKALMNLGYEALFPKDATDVNPAILSALSPNADENHDFFSGS 315 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TED+DWDF Sbjct 316 GSSYVIGKAVNTEDEDWDF 334 >gi|269794349|ref|YP_003313804.1| ribonucleoside-diphosphate reductase class Ib subunit beta [Sanguibacter keddieii DSM 10542] gi|269096534|gb|ACZ20970.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Sanguibacter keddieii DSM 10542] Length=325 Score = 576 bits (1485), Expect = 1e-162, Method: Compositional matrix adjust. Identities = 277/323 (86%), Positives = 295/323 (92%), Gaps = 0/323 (0%) Query 2 TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLT 61 TG KL+ RV AINWNR++DEKD+EVWDRLTGNFWLPEKVPVSNDI SW TLT EK+LT Sbjct 3 TGKLKLVSRVQAINWNRVEDEKDSEVWDRLTGNFWLPEKVPVSNDIQSWATLTPVEKELT 62 Query 62 MRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTA 121 RVFTGLT+LDTIQGTVGAVSLIPDA+TPHEEAV TNIAFMESVHAKSYS IFSTL ST Sbjct 63 TRVFTGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLISTQ 122 Query 122 EIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRA 181 EIDDAFRWSEEN NLQRKAEIVL+YY GD PLKRKVASTLLESFLFYSGFYLPMYWSSRA Sbjct 123 EIDDAFRWSEENANLQRKAEIVLEYYHGDSPLKRKVASTLLESFLFYSGFYLPMYWSSRA 182 Query 182 KLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEY 241 KLTNTAD+IRLIIRDEAVHGYYIGYK+Q+GL + R E+K YT+ELLFELY+NEV+Y Sbjct 183 KLTNTADLIRLIIRDEAVHGYYIGYKYQKGLEKLSPAERDEMKAYTFELLFELYENEVQY 242 Query 242 TQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF 301 T DLYD VGLTEDVKKFLRYNANKALMNLGYE LFP+DETDVNPAILSALSPNADENHDF Sbjct 243 TADLYDGVGLTEDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDF 302 Query 302 FSGSGSSYVIGKAVVTEDDDWDF 324 FSGSGSSYVIGKAV TED+DWDF Sbjct 303 FSGSGSSYVIGKAVNTEDEDWDF 325 >gi|256832970|ref|YP_003161697.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM 20603] gi|256686501|gb|ACV09394.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM 20603] Length=325 Score = 571 bits (1472), Expect = 5e-161, Method: Compositional matrix adjust. Identities = 275/323 (86%), Positives = 298/323 (93%), Gaps = 0/323 (0%) Query 2 TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLT 61 TG KLIDRV+AINWNR++D+KD EVWDRL GNFW+PEKVPVSNDI SW TLT E++LT Sbjct 3 TGKIKLIDRVTAINWNRIEDDKDLEVWDRLVGNFWVPEKVPVSNDIQSWATLTPQEQELT 62 Query 62 MRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTA 121 RVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYS IFSTL ST Sbjct 63 TRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSTIFSTLISTP 122 Query 122 EIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRA 181 EID+AFRWSEEN +LQRKAEI+L+YYRGD+PLKRKVASTLLESFLFYSGFYLPMYWSSRA Sbjct 123 EIDEAFRWSEENPHLQRKAEIILEYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRA 182 Query 182 KLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEY 241 KLTNTAD+IRLIIRDEAVHGYYIGYK+Q+GL V R ELK YT++LL+ELYDNEV Y Sbjct 183 KLTNTADLIRLIIRDEAVHGYYIGYKYQKGLEAVTPERREELKAYTFDLLYELYDNEVAY 242 Query 242 TQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF 301 T+ LYD VGLTEDVKKFLRYNANKAL+NLGYEALFP+DETDVNPAILSALSPNADENHDF Sbjct 243 TESLYDGVGLTEDVKKFLRYNANKALLNLGYEALFPKDETDVNPAILSALSPNADENHDF 302 Query 302 FSGSGSSYVIGKAVVTEDDDWDF 324 FSGSGSSYVIGKAV TED+DWDF Sbjct 303 FSGSGSSYVIGKAVNTEDEDWDF 325 >gi|334337743|ref|YP_004542895.1| ribonucleoside-diphosphate reductase [Isoptericola variabilis 225] gi|334108111|gb|AEG45001.1| Ribonucleoside-diphosphate reductase [Isoptericola variabilis 225] Length=326 Score = 568 bits (1464), Expect = 4e-160, Method: Compositional matrix adjust. Identities = 276/323 (86%), Positives = 292/323 (91%), Gaps = 0/323 (0%) Query 2 TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLT 61 TG KLIDRVSAINWNRL+DEKD EVWDRL GNFWLPEKVPVSNDI SW TLT EK +T Sbjct 4 TGKLKLIDRVSAINWNRLEDEKDLEVWDRLVGNFWLPEKVPVSNDIQSWNTLTEAEKLMT 63 Query 62 MRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTA 121 RVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTL ST Sbjct 64 TRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLISTR 123 Query 122 EIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRA 181 EIDDAF WSE+N NLQRKAEIVL YYRGD+PLKRKVAST+LESFLFYSGFY PMYWSSRA Sbjct 124 EIDDAFAWSEQNPNLQRKAEIVLDYYRGDDPLKRKVASTMLESFLFYSGFYAPMYWSSRA 183 Query 182 KLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEY 241 KLTNTAD+IRLIIRDEAVHGYYIGYKFQ+GL V + ELK YT+ELLFELY+NEVEY Sbjct 184 KLTNTADLIRLIIRDEAVHGYYIGYKFQKGLQRVSQAEQDELKAYTFELLFELYENEVEY 243 Query 242 TQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF 301 T LY E+GLTEDVKKFLRYNANKALMNLGYEALFP+++TDVNPAIL+ALSPNADENHDF Sbjct 244 TDALYGELGLTEDVKKFLRYNANKALMNLGYEALFPKEDTDVNPAILAALSPNADENHDF 303 Query 302 FSGSGSSYVIGKAVVTEDDDWDF 324 FSGSGSSYVIGKAV T DDDWDF Sbjct 304 FSGSGSSYVIGKAVETTDDDWDF 326 >gi|269957220|ref|YP_003327009.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica DSM 15894] gi|269305901|gb|ACZ31451.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica DSM 15894] Length=326 Score = 567 bits (1462), Expect = 7e-160, Method: Compositional matrix adjust. Identities = 274/323 (85%), Positives = 293/323 (91%), Gaps = 0/323 (0%) Query 2 TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLT 61 TG KLIDRVSAINWNRL DEKD EVWDRL GNFW+PEKVPVSNDI SW TL+ EK +T Sbjct 4 TGKLKLIDRVSAINWNRLDDEKDLEVWDRLVGNFWVPEKVPVSNDIQSWATLSEAEKNMT 63 Query 62 MRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTA 121 RVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTL ST Sbjct 64 TRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLISTK 123 Query 122 EIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRA 181 EID+AF WSE N NLQRKAEIVL+YYRGD+PLKRKVAST+LESFLFYSGFY PMYWSSRA Sbjct 124 EIDEAFAWSEANPNLQRKAEIVLEYYRGDDPLKRKVASTMLESFLFYSGFYAPMYWSSRA 183 Query 182 KLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEY 241 KLTNTAD+IRLIIRDEAVHGYYIGYKFQ+GLAL + E+K YT+ELLFELY+NEVEY Sbjct 184 KLTNTADLIRLIIRDEAVHGYYIGYKFQKGLALESQERQDEIKAYTFELLFELYENEVEY 243 Query 242 TQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDF 301 T+ LY E+GLTEDVKKFLRYNANKALMNLGYEALFP++ETDVNPAIL+ALSPNADENHDF Sbjct 244 TEALYGELGLTEDVKKFLRYNANKALMNLGYEALFPKEETDVNPAILAALSPNADENHDF 303 Query 302 FSGSGSSYVIGKAVVTEDDDWDF 324 FSGSGSSYVIGKAV T DDDWDF Sbjct 304 FSGSGSSYVIGKAVDTTDDDWDF 326 >gi|119961248|ref|YP_948075.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter aurescens TC1] gi|119948107|gb|ABM07018.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter aurescens TC1] Length=324 Score = 559 bits (1441), Expect = 2e-157, Method: Compositional matrix adjust. Identities = 264/324 (82%), Positives = 291/324 (90%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +T KL+ V AINWN++QD+KD EVW+RL NFWLPEKVP+SND+ SW TLT E+QL Sbjct 1 MTEKVKLLTHVEAINWNKIQDDKDVEVWNRLVNNFWLPEKVPLSNDVQSWHTLTPDEQQL 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLT+LDTIQGTVGAVSLIPDA+TPHEEAV TNIAFMESVHAKSYS IFSTLCST Sbjct 61 TMRVFTGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 EIDDAFRWS EN NLQ+KA+IV+ YY+GD+PLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 KEIDDAFRWSLENENLQKKAQIVMDYYQGDDPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTAD+IRLIIRDEAVHGYYIGYKFQ+GL V + + E+KDYT+ELLFELY+NEV+ Sbjct 181 AKLTNTADLIRLIIRDEAVHGYYIGYKFQKGLEKVSEARKQEIKDYTFELLFELYENEVQ 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YT DLYD VGL EDVKKFL YNANKALMNLGYEA+FP TDVNPAILSALSPNADENHD Sbjct 241 YTHDLYDGVGLAEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAV TED+DW+F Sbjct 301 FFSGSGSSYVIGKAVNTEDEDWEF 324 >gi|325963521|ref|YP_004241427.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Arthrobacter phenanthrenivorans Sphe3] gi|323469608|gb|ADX73293.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Arthrobacter phenanthrenivorans Sphe3] Length=324 Score = 558 bits (1439), Expect = 4e-157, Method: Compositional matrix adjust. Identities = 266/324 (83%), Positives = 289/324 (90%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +T KL+ V AINWNR+QD+KD +VW+RL NFWLPEKVP+SND+ SW TLT E+QL Sbjct 1 MTEKVKLLSHVEAINWNRIQDDKDVDVWNRLVNNFWLPEKVPLSNDVQSWNTLTPAEQQL 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTL ST Sbjct 61 TMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLAST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 EID+AFRWS EN NLQ+KA+IV+ YY+GD+PLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 KEIDEAFRWSTENENLQKKAQIVMDYYQGDDPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTAD+IRLIIRDEAVHGYYIGYKFQRGL V R E+KDYT+ELLFELY+NEV+ Sbjct 181 AKLTNTADLIRLIIRDEAVHGYYIGYKFQRGLEAVSPERRQEIKDYTFELLFELYENEVQ 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YT DLYD VGL EDVKKFL YNANKALMNLGYEA+FP TDVNPAILSALSPNADENHD Sbjct 241 YTHDLYDGVGLAEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAV TED+DWDF Sbjct 301 FFSGSGSSYVIGKAVNTEDEDWDF 324 >gi|116670901|ref|YP_831834.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter sp. FB24] gi|116611010|gb|ABK03734.1| ribonucleoside-diphosphate reductase class Ib beta subunit [Arthrobacter sp. FB24] Length=324 Score = 558 bits (1438), Expect = 4e-157, Method: Compositional matrix adjust. Identities = 264/324 (82%), Positives = 290/324 (90%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +T KL+ V AINWNR+QD+KD +VW+RL NFWLPEKVP+SND+ SW TLT E+QL Sbjct 1 MTEKVKLLSHVEAINWNRIQDDKDVDVWNRLVNNFWLPEKVPLSNDVQSWATLTPDEQQL 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLT+LDTIQGTVGAVSLIPDA+TPHEEAV TNIAFMESVHAKSYS IFSTL ST Sbjct 61 TMRVFTGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLAST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 EID+AFRWS EN NLQ+KA+IV+ YY+GD+PLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 KEIDEAFRWSTENANLQKKAQIVMDYYQGDDPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTAD+IRLIIRDEAVHGYYIGYKFQ+GL V + R E+KDYT+ELLFELY+NEV+ Sbjct 181 AKLTNTADLIRLIIRDEAVHGYYIGYKFQKGLEKVSEEKRQEIKDYTFELLFELYENEVQ 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YT DLYD VGL EDVKKFL YNANKALMNLGYEA+FP TDVNPAILSALSPNADENHD Sbjct 241 YTHDLYDSVGLAEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAV TED+DWDF Sbjct 301 FFSGSGSSYVIGKAVNTEDEDWDF 324 >gi|220912864|ref|YP_002488173.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter chlorophenolicus A6] gi|219859742|gb|ACL40084.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus A6] Length=324 Score = 556 bits (1433), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 265/324 (82%), Positives = 289/324 (90%), Gaps = 0/324 (0%) Query 1 VTGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQL 60 +T KL+ V AINWNR+QD+KD +VW+RL NFWLPEKVP+SND+ SW TLT E+QL Sbjct 1 MTEKVKLLSHVEAINWNRIQDDKDVDVWNRLVNNFWLPEKVPLSNDVQSWNTLTPVEQQL 60 Query 61 TMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCST 120 TMRVFTGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTL ST Sbjct 61 TMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLAST 120 Query 121 AEIDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 EID+AFRWS EN NLQ+KA+IV+ YY+GD+PLKRKVASTLLESFLFYSGFYLPMYWSSR Sbjct 121 KEIDEAFRWSTENENLQKKAQIVMDYYQGDDPLKRKVASTLLESFLFYSGFYLPMYWSSR 180 Query 181 AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVE 240 AKLTNTAD+IRLIIRDEAVHGYYIGYKFQR L V + R E+KDYT+ELLFELY+NEV+ Sbjct 181 AKLTNTADLIRLIIRDEAVHGYYIGYKFQRALETVSEERRQEIKDYTFELLFELYENEVQ 240 Query 241 YTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHD 300 YT DLYD VGL EDVKKFL YNANKALMNLGYEA+FP TDVNPAILSALSPNADENHD Sbjct 241 YTHDLYDGVGLAEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENHD 300 Query 301 FFSGSGSSYVIGKAVVTEDDDWDF 324 FFSGSGSSYVIGKAV TED+DWDF Sbjct 301 FFSGSGSSYVIGKAVNTEDEDWDF 324 >gi|317506846|ref|ZP_07964618.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974] gi|316254774|gb|EFV14072.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974] Length=332 Score = 556 bits (1433), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 268/314 (86%), Positives = 286/314 (92%), Gaps = 0/314 (0%) Query 11 VSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVFTGLTM 70 V AINWNR+ DEKD+EVWDRL GNFWLPEKVP+SNDI SW TL E+QLTMRVFTGLT+ Sbjct 19 VRAINWNRVVDEKDSEVWDRLVGNFWLPEKVPLSNDIQSWHTLNEHEQQLTMRVFTGLTL 78 Query 71 LDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDDAFRWS 130 LDTIQG VGAVSLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTL +T EID+AFRWS Sbjct 79 LDTIQGAVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLSNTPEIDEAFRWS 138 Query 131 EENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADMI 190 EEN NLQRKA IVL+ YRGD+PLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTAD+I Sbjct 139 EENPNLQRKAAIVLERYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADLI 198 Query 191 RLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDLYDEVG 250 RLIIRDEAVHGYYIGYK+QRGLA + R ELKD+T+ LLF+LY+NEVEYTQDLYD VG Sbjct 199 RLIIRDEAVHGYYIGYKYQRGLAASTEQRREELKDFTFSLLFDLYENEVEYTQDLYDPVG 258 Query 251 LTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 310 LTEDVKKFLRYNANKAL NLGYE LFP+DET VNPAILSALSPNADENHDFFSGSGSSYV Sbjct 259 LTEDVKKFLRYNANKALNNLGYEGLFPKDETSVNPAILSALSPNADENHDFFSGSGSSYV 318 Query 311 IGKAVVTEDDDWDF 324 IGKAV TED+DWDF Sbjct 319 IGKAVATEDEDWDF 332 >gi|163842202|ref|YP_001626607.1| ribonucleotide-diphosphate reductase subunit beta [Renibacterium salmoninarum ATCC 33209] gi|162955678|gb|ABY25193.1| ribonucleoside-diphosphate reductase beta chain [Renibacterium salmoninarum ATCC 33209] Length=325 Score = 555 bits (1431), Expect = 3e-156, Method: Compositional matrix adjust. Identities = 261/319 (82%), Positives = 289/319 (91%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KL+D+V AINWNR+QD+KD EVW+RL NFWLPEKVP+SND+ SW TLT E+QLTMRVF Sbjct 7 KLVDQVQAINWNRIQDDKDVEVWNRLVNNFWLPEKVPLSNDVQSWATLTPDEQQLTMRVF 66 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDT+QGTVGAVSLIPDA+TPHEEAV TNIAFMESVHAKSYS IFSTLCST EID+ Sbjct 67 TGLTLLDTLQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDE 126 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWS EN NLQ+KA+IV+ YY GD+PLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN Sbjct 127 AFRWSVENENLQKKAQIVMNYYTGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 186 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TAD+IRLIIRDEAVHGYYIGYKFQ+GL V + R E+K YT++LL+ELY+NE++YT DL Sbjct 187 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVSEERREEIKAYTFDLLYELYENEIQYTHDL 246 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YD VGL EDVKKFL YNANKALMNLGYEA+FP TDVNPAILSALSPNADENHDFFSGS Sbjct 247 YDAVGLAEDVKKFLHYNANKALMNLGYEAMFPSTVTDVNPAILSALSPNADENHDFFSGS 306 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKAV TED+DWDF Sbjct 307 GSSYVIGKAVNTEDEDWDF 325 >gi|296393703|ref|YP_003658587.1| ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM 44985] gi|296180850|gb|ADG97756.1| Ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM 44985] Length=334 Score = 555 bits (1430), Expect = 4e-156, Method: Compositional matrix adjust. Identities = 267/322 (83%), Positives = 288/322 (90%), Gaps = 0/322 (0%) Query 3 GNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTM 62 G AK + A+NWNR+ DEKDAEVWDRL GNFWLPEKVP+SNDI SW TL E++LTM Sbjct 13 GEAKQVKLARAVNWNRVADEKDAEVWDRLVGNFWLPEKVPLSNDIQSWHTLNEDEQRLTM 72 Query 63 RVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAE 122 RVFTGLT+LDTIQG+VGAVSLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTL T E Sbjct 73 RVFTGLTLLDTIQGSVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLTGTPE 132 Query 123 IDDAFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAK 182 ID+AFRWSEEN LQ+KA IVL+ YRGD+PLKRKVASTLLESFLFYSGFYLPMYWSSRAK Sbjct 133 IDEAFRWSEENPALQKKAAIVLERYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAK 192 Query 183 LTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYT 242 LTNTAD+IRLIIRDEAVHGYYIGYK+QRGL + R ELKD+T+ LLF+LY+NEVEYT Sbjct 193 LTNTADLIRLIIRDEAVHGYYIGYKYQRGLQMSTPERREELKDFTFSLLFDLYENEVEYT 252 Query 243 QDLYDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFF 302 QDLYD VGLTEDVKKFLRYNANKALMNLGYE LFP+DET VNPAILSALSPNADENHDFF Sbjct 253 QDLYDPVGLTEDVKKFLRYNANKALMNLGYEGLFPKDETAVNPAILSALSPNADENHDFF 312 Query 303 SGSGSSYVIGKAVVTEDDDWDF 324 SGSGSSYVIGKAV TED+DWDF Sbjct 313 SGSGSSYVIGKAVATEDEDWDF 334 >gi|323359290|ref|YP_004225686.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum StLB037] gi|323275661|dbj|BAJ75806.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum StLB037] Length=324 Score = 550 bits (1418), Expect = 9e-155, Method: Compositional matrix adjust. Identities = 262/319 (83%), Positives = 285/319 (90%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 +L++ V AINWNR+QD+KD EVW+RL NFWLPEKVP+SNDI SW TLT E+ LTMRVF Sbjct 6 QLLNHVQAINWNRIQDDKDLEVWNRLVNNFWLPEKVPLSNDIQSWNTLTPEEQTLTMRVF 65 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDA+TPHEEAV TNIAFMESVHAKSYS IFSTLCST EID+ Sbjct 66 TGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDE 125 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRWS EN LQ+KA IV+ YYRGD+PLKRKVASTLLESFLFYSGFYLPM+WSSRAKLTN Sbjct 126 AFRWSTENEFLQKKARIVMDYYRGDDPLKRKVASTLLESFLFYSGFYLPMHWSSRAKLTN 185 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TAD+IRLIIRDEAVHGYYIGYKFQRGL VD R ++KDYT+ LL+ELYDNEV YTQ L Sbjct 186 TADLIRLIIRDEAVHGYYIGYKFQRGLETVDQARRDDIKDYTFSLLYELYDNEVGYTQSL 245 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YD VGL+EDVKKFL YNANKALMNLGYEA+FP T+VNPAILSALSPNADENHDFFSGS Sbjct 246 YDAVGLSEDVKKFLHYNANKALMNLGYEAMFPSSVTNVNPAILSALSPNADENHDFFSGS 305 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYVIGKA TEDDDWDF Sbjct 306 GSSYVIGKAEATEDDDWDF 324 >gi|319948549|ref|ZP_08022680.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea P4] gi|319437796|gb|EFV92785.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea P4] Length=338 Score = 547 bits (1410), Expect = 7e-154, Method: Compositional matrix adjust. Identities = 260/319 (82%), Positives = 286/319 (90%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KL+DRVSAINWNR+ DE D +VW RLT NFWLPEKVPVSNDIPSW TLT E+ +T RVF Sbjct 20 KLVDRVSAINWNRVPDEVDDQVWGRLTTNFWLPEKVPVSNDIPSWQTLTEYEQTMTARVF 79 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVS+IPDA TPHEEAVLTNIAFMESVHAKSYS IFSTLCST +ID+ Sbjct 80 TGLTLLDTIQGTVGAVSMIPDASTPHEEAVLTNIAFMESVHAKSYSTIFSTLCSTPQIDE 139 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AFRW+EEN LQRKA+I+L YY GD PLKRK+AS +LESF+FYSGFYLPM WSSRAKLTN Sbjct 140 AFRWAEENPYLQRKAKIILGYYAGDNPLKRKIASVMLESFMFYSGFYLPMRWSSRAKLTN 199 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TAD+IRLIIRDEAVHGYYIGYK+QRGL V R ELKDYT+ELLFELYDNE +YT+DL Sbjct 200 TADVIRLIIRDEAVHGYYIGYKYQRGLEHVTQAERDELKDYTFELLFELYDNEADYTEDL 259 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 YD VG TEDVKKFLRYNANKALMN+GYE +FP+DETDV+PAILSALSPNADENHDFFSGS Sbjct 260 YDPVGWTEDVKKFLRYNANKALMNMGYEGMFPKDETDVDPAILSALSPNADENHDFFSGS 319 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYV+GKA TED+DWDF Sbjct 320 GSSYVMGKAEATEDEDWDF 338 >gi|225351964|ref|ZP_03742987.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157211|gb|EEG70550.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium pseudocatenulatum DSM 20438] Length=330 Score = 544 bits (1402), Expect = 6e-153, Method: Compositional matrix adjust. Identities = 260/319 (82%), Positives = 288/319 (91%), Gaps = 0/319 (0%) Query 6 KLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVF 65 KLIDRVSAINWN+L+D+KD EVWDRLTGNFWLPEKVPVSND+P W T++ E LTMRVF Sbjct 12 KLIDRVSAINWNKLEDDKDLEVWDRLTGNFWLPEKVPVSNDLPVWRTMSEAEHTLTMRVF 71 Query 66 TGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDD 125 TGLT+LDTIQGTVGAVSLIPDALTPHEEAV TNIAFMESVHAKSYS IFSTLCST +ID+ Sbjct 72 TGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTRQIDE 131 Query 126 AFRWSEENRNLQRKAEIVLQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTN 185 AF WSEEN LQRKA IVL YY GD PLKRKVASTLLESFLFYSGFYLPMY+S+ AKLTN Sbjct 132 AFSWSEENEYLQRKARIVLDYYEGDSPLKRKVASTLLESFLFYSGFYLPMYFSAHAKLTN 191 Query 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245 TAD+IRLIIRDEAVHGYYIGYK+Q+GL LV + R EL+DYTY+LL ELYDNEVEYT+ L Sbjct 192 TADVIRLIIRDEAVHGYYIGYKYQKGLELVSEDKRGELRDYTYDLLNELYDNEVEYTRSL 251 Query 246 YDEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGS 305 Y+ VGLT+DV+KFLRYN NKALMNLGY ALFP++ DVNP+IL+ALSPNADENHDFFSGS Sbjct 252 YEPVGLTQDVEKFLRYNGNKALMNLGYPALFPQEICDVNPSILAALSPNADENHDFFSGS 311 Query 306 GSSYVIGKAVVTEDDDWDF 324 GSSYV+GK+V T+DDDWDF Sbjct 312 GSSYVMGKSVETDDDDWDF 330 Lambda K H 0.318 0.135 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 574046524410 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40