BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3051c Length=693 Score E Sequences producing significant alignments: (Bits) Value gi|15842617|ref|NP_337654.1| ribonucleotide-diphosphate reductas... 1441 0.0 gi|15610188|ref|NP_217567.1| ribonucleotide-diphosphate reductas... 1440 0.0 gi|294993445|ref|ZP_06799136.1| ribonucleotide-diphosphate reduc... 1439 0.0 gi|340628043|ref|YP_004746495.1| ribonucleoside-diphosphate redu... 1436 0.0 gi|289755167|ref|ZP_06514545.1| ribonucleotide-diphosphate reduc... 1432 0.0 gi|557567|gb|AAA64444.1| ribonucleotide reductase R1 subunit [My... 1431 0.0 gi|254776338|ref|ZP_05217854.1| ribonucleotide-diphosphate reduc... 1402 0.0 gi|41409198|ref|NP_962034.1| ribonucleotide-diphosphate reductas... 1402 0.0 gi|118464322|ref|YP_883081.1| ribonucleotide-diphosphate reducta... 1402 0.0 gi|336459255|gb|EGO38200.1| ribonucleoside-diphosphate reductase... 1400 0.0 gi|240169544|ref|ZP_04748203.1| ribonucleotide-diphosphate reduc... 1389 0.0 gi|254820781|ref|ZP_05225782.1| ribonucleotide-diphosphate reduc... 1388 0.0 gi|296171153|ref|ZP_06852601.1| ribonucleotide-diphosphate reduc... 1387 0.0 gi|289444614|ref|ZP_06434358.1| ribonucleoside-diphosphate reduc... 1387 0.0 gi|342858098|ref|ZP_08714753.1| ribonucleotide-diphosphate reduc... 1385 0.0 gi|183981656|ref|YP_001849947.1| ribonucleoside-diphosphate redu... 1384 0.0 gi|108798785|ref|YP_638982.1| ribonucleotide-diphosphate reducta... 1381 0.0 gi|118617479|ref|YP_905811.1| ribonucleotide-diphosphate reducta... 1380 0.0 gi|254233681|ref|ZP_04927006.1| ribonucleoside-diphosphate reduc... 1378 0.0 gi|289751723|ref|ZP_06511101.1| ribonucleotide-diphosphate reduc... 1377 0.0 gi|289575761|ref|ZP_06455988.1| ribonucleoside-diphosphate reduc... 1372 0.0 gi|169630494|ref|YP_001704143.1| ribonucleotide-diphosphate redu... 1372 0.0 gi|118468034|ref|YP_886648.1| ribonucleotide-diphosphate reducta... 1372 0.0 gi|302595802|sp|P0CG99.1|RIR1A_MYCS2 RecName: Full=Ribonucleosid... 1372 0.0 gi|120403036|ref|YP_952865.1| ribonucleotide-diphosphate reducta... 1372 0.0 gi|289759176|ref|ZP_06518554.1| LOW QUALITY PROTEIN: ribonucleot... 1369 0.0 gi|315445212|ref|YP_004078091.1| ribonucleoside-diphosphate redu... 1365 0.0 gi|145224884|ref|YP_001135562.1| ribonucleotide-diphosphate redu... 1364 0.0 gi|18202755|sp|Q9CBQ0.2|RIR1_MYCLE RecName: Full=Ribonucleoside-... 1356 0.0 gi|15827932|ref|NP_302195.1| ribonucleotide-diphosphate reductas... 1353 0.0 gi|289746859|ref|ZP_06506237.1| ribonucleoside-diphosphate reduc... 1346 0.0 gi|333991427|ref|YP_004524041.1| ribonucleoside-diphosphate redu... 1343 0.0 gi|111023402|ref|YP_706374.1| ribonucleotide-diphosphate reducta... 1330 0.0 gi|325675840|ref|ZP_08155524.1| ribonucleotide-diphosphate reduc... 1329 0.0 gi|312140540|ref|YP_004007876.1| ribonucleoside-diphosphate redu... 1328 0.0 gi|229493417|ref|ZP_04387206.1| ribonucleoside-diphosphate reduc... 1316 0.0 gi|226305839|ref|YP_002765799.1| ribonucleoside-diphosphate redu... 1315 0.0 gi|226365903|ref|YP_002783686.1| ribonucleotide-diphosphate redu... 1313 0.0 gi|262203178|ref|YP_003274386.1| ribonucleoside-diphosphate redu... 1306 0.0 gi|343926905|ref|ZP_08766398.1| ribonucleoside-diphosphate reduc... 1306 0.0 gi|333921314|ref|YP_004494895.1| ribonucleoside-diphosphate redu... 1293 0.0 gi|296140661|ref|YP_003647904.1| ribonucleoside-diphosphate redu... 1288 0.0 gi|326381480|ref|ZP_08203174.1| ribonucleotide-diphosphate reduc... 1282 0.0 gi|319948550|ref|ZP_08022681.1| ribonucleotide-diphosphate reduc... 1274 0.0 gi|317506845|ref|ZP_07964617.1| ribonucleotide reductase [Segnil... 1268 0.0 gi|296393702|ref|YP_003658586.1| ribonucleoside-diphosphate redu... 1262 0.0 gi|332671992|ref|YP_004455000.1| ribonucleoside-diphosphate redu... 1240 0.0 gi|336322019|ref|YP_004601987.1| ribonucleoside-diphosphate redu... 1234 0.0 gi|119960800|ref|YP_948076.1| ribonucleotide-diphosphate reducta... 1234 0.0 gi|229818598|ref|YP_002880124.1| ribonucleoside-diphosphate redu... 1232 0.0 >gi|15842617|ref|NP_337654.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium tuberculosis CDC1551] gi|148824242|ref|YP_001288996.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium tuberculosis F11] gi|253797851|ref|YP_003030852.1| ribonucleoside-diphosphate reductase subunit alpha nrdE [Mycobacterium tuberculosis KZN 1435] 15 more sequence titles Length=725 Score = 1441 bits (3730), Expect = 0.0, Method: Compositional matrix adjust. Identities = 693/693 (100%), Positives = 693/693 (100%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 33 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 92 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 93 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 152 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS Sbjct 153 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 212 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 213 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 272 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 273 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 332 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 333 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 392 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 393 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 452 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 453 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 512 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP Sbjct 513 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 572 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 573 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 632 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 633 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 692 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 725 >gi|15610188|ref|NP_217567.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium tuberculosis H37Rv] gi|31794229|ref|NP_856722.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium bovis AF2122/97] gi|121638935|ref|YP_979159.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium bovis BCG str. Pasteur 1173P2] 40 more sequence titles Length=693 Score = 1440 bits (3728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 693/693 (100%), Positives = 693/693 (100%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS Sbjct 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP Sbjct 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 >gi|294993445|ref|ZP_06799136.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium tuberculosis 210] gi|339299500|gb|AEJ51610.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium tuberculosis CCDC5180] Length=693 Score = 1439 bits (3724), Expect = 0.0, Method: Compositional matrix adjust. Identities = 692/693 (99%), Positives = 693/693 (100%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS Sbjct 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTD+IWEPKTQKVRQLFADAGIRIP Sbjct 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDRIWEPKTQKVRQLFADAGIRIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 >gi|340628043|ref|YP_004746495.1| ribonucleoside-diphosphate reductase subunit alphaNRDE [Mycobacterium canettii CIPT 140010059] gi|340006233|emb|CCC45407.1| ribonucleoside-diphosphate reductase (alpha chain) NRDE (ribonucleotide reductase small subunit) (R1F protein) [Mycobacterium canettii CIPT 140010059] Length=693 Score = 1436 bits (3716), Expect = 0.0, Method: Compositional matrix adjust. Identities = 691/693 (99%), Positives = 692/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLD AYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 61 RNFVKTLLDCAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP Sbjct 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 >gi|289755167|ref|ZP_06514545.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium tuberculosis EAS054] gi|289695754|gb|EFD63183.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium tuberculosis EAS054] Length=693 Score = 1432 bits (3706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 690/693 (99%), Positives = 691/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS Sbjct 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP Sbjct 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTA TRDVN+AQ Sbjct 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTAPTRDVNQAQD 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 >gi|557567|gb|AAA64444.1| ribonucleotide reductase R1 subunit [Mycobacterium tuberculosis str. Erdman] Length=723 Score = 1431 bits (3704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 688/693 (99%), Positives = 689/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 31 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 90 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 91 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 150 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS Sbjct 151 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 210 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHG IKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 211 KRGGGVALLLTNIREHGGAIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 270 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 271 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 330 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 331 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 390 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 391 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 450 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAV QTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 451 LTAVRHQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 510 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP Sbjct 511 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 570 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVE+RKEGKIGRVY Sbjct 571 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEVRKEGKIGRVY 630 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 631 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 690 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 691 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 723 >gi|254776338|ref|ZP_05217854.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium avium subsp. avium ATCC 25291] Length=693 Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust. Identities = 671/693 (97%), Positives = 684/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKD AA QYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 1 MLNLYDADGKIQFDKDVLAARQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK LLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 61 RNFVKALLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEII+GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 121 TGLAEKLVDEIIEGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYG+P Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGLP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 361 ITHSNLCSEILQVSTPSLFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARE IFYGS+EGIDFTNIYFYTV Sbjct 421 LTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNLHGYLAREGIFYGSEEGIDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYT+Q+WEP T+KVRQLFADAGIRIP Sbjct 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTEQVWEPATEKVRQLFADAGIRIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDW+RLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 541 TQDDWKRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 601 YPAPYMTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 >gi|41409198|ref|NP_962034.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398018|gb|AAS05648.1| NrdE [Mycobacterium avium subsp. paratuberculosis K-10] Length=726 Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust. Identities = 671/693 (97%), Positives = 685/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKD AA QYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 34 MLNLYDADGKIQFDKDVLAARQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 93 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK+LLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 94 RNFVKSLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 153 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEII+GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 154 TGLAEKLVDEIIEGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 213 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 214 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 273 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYG+P Sbjct 274 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGLP 333 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 334 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 393 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 394 ITHSNLCSEILQVSTPSLFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 453 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARE IFYGS+EGIDFTNIYFYTV Sbjct 454 LTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNLHGYLAREGIFYGSEEGIDFTNIYFYTV 513 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYT+Q+WEP T+KVRQLFADAGIRIP Sbjct 514 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTEQVWEPATEKVRQLFADAGIRIP 573 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDW+RLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 574 TQDDWKRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 633 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 634 YPAPYMTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 693 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 694 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 726 >gi|118464322|ref|YP_883081.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium avium 104] gi|118165609|gb|ABK66506.1| ribonucleoside-diphosphate reductase, alpha subunit [Mycobacterium avium 104] Length=705 Score = 1402 bits (3628), Expect = 0.0, Method: Compositional matrix adjust. Identities = 671/693 (97%), Positives = 684/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKD AA QYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 13 MLNLYDADGKIQFDKDVLAARQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 72 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK LLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 73 RNFVKALLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 132 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEII+GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 133 TGLAEKLVDEIIEGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 192 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 193 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 252 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYG+P Sbjct 253 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGLP 312 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 313 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 372 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 373 ITHSNLCSEILQVSTPSLFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 432 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARE IFYGS+EGIDFTNIYFYTV Sbjct 433 LTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNLHGYLAREGIFYGSEEGIDFTNIYFYTV 492 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYT+Q+WEP T+KVRQLFADAGIRIP Sbjct 493 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTEQVWEPATEKVRQLFADAGIRIP 552 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDW+RLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 553 TQDDWKRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 612 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 613 YPAPYMTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 672 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 673 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 705 >gi|336459255|gb|EGO38200.1| ribonucleoside-diphosphate reductase, alpha subunit [Mycobacterium avium subsp. paratuberculosis S397] Length=721 Score = 1400 bits (3623), Expect = 0.0, Method: Compositional matrix adjust. Identities = 670/693 (97%), Positives = 684/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKD AA QYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 29 MLNLYDADGKIQFDKDVLAARQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 88 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK+LLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 89 RNFVKSLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 148 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEII+GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 149 TGLAEKLVDEIIEGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 208 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 209 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 268 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYG+P Sbjct 269 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGLP 328 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 329 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 388 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 389 ITHSNLCSEILQVSTPSLFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 448 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARE IFYGS+EGIDFTNIYFYTV Sbjct 449 LTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNLHGYLAREGIFYGSEEGIDFTNIYFYTV 508 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYT+Q+WEP T+KVRQLFADAGIRIP Sbjct 509 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTEQVWEPATEKVRQLFADAGIRIP 568 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDW+RLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 569 TQDDWKRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 628 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAP MTNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 629 YPAPDMTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 688 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 689 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 721 >gi|240169544|ref|ZP_04748203.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium kansasii ATCC 12478] Length=693 Score = 1389 bits (3594), Expect = 0.0, Method: Compositional matrix adjust. Identities = 665/693 (96%), Positives = 680/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKD AA QYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 1 MLNLYDADGKIQFDKDVLAARQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK+LLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMV+LTLA GD Sbjct 61 RNFVKSLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVSLTLAGGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEII+GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 121 TTLAEQLVDEIIEGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVD+ RIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 301 FADISVTEKYYEMVDNPRIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS FNEDLSYAKVGKDISCNLGSLNIAKTMDSP+FAQTIEVAIRA Sbjct 361 ITHSNLCSEILQVSTPSYFNEDLSYAKVGKDISCNLGSLNIAKTMDSPNFAQTIEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNN+SHAIGLGQMNLHGYLARERIFYGS+EGIDFTNIYFYTV Sbjct 421 LTAVSDQTHITSVPSIEQGNNESHAIGLGQMNLHGYLARERIFYGSEEGIDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRI+IERGTHFKGFERSKYASGEFFDKYT+QIWEPKT+KVR+LFA A I IP Sbjct 481 LYHALRASNRISIERGTHFKGFERSKYASGEFFDKYTEQIWEPKTEKVRRLFAAADIHIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFF DTATTR+VNKAQI Sbjct 601 YPAPYMTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFMDTATTREVNKAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 >gi|254820781|ref|ZP_05225782.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium intracellulare ATCC 13950] Length=693 Score = 1388 bits (3592), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/693 (95%), Positives = 683/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLI+ENYYEREVLDQYS Sbjct 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIKENYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLA+GD Sbjct 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLASGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 121 TILAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLSNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYG+P Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGLP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS+FN+DLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 361 ITHSNLCSEILQVSTPSVFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNN+SHAIGLGQMNLHGYLARERI YGS+EG+DFTNIYFYTV Sbjct 421 LTAVSDQTHITSVPSIEQGNNESHAIGLGQMNLHGYLARERIHYGSEEGVDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERG+ F GFERSKYASGEFFDKYT+Q+WEP T +VR++FA+AGIRIP Sbjct 481 LYHALRASNRIAIERGSKFGGFERSKYASGEFFDKYTEQVWEPATPRVREIFAEAGIRIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQ HGIYNQNLQAVPPTGSISYINHSTSSIHP+ SK+EIRKEGKIGRVY Sbjct 541 TQDDWRRLKESVQEHGIYNQNLQAVPPTGSISYINHSTSSIHPVASKIEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 601 YPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQ+ALEGTEVEGCVSCML Sbjct 661 YAWRKGIKTLYYIRLRQLALEGTEVEGCVSCML 693 >gi|296171153|ref|ZP_06852601.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894289|gb|EFG74044.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium parascrofulaceum ATCC BAA-614] Length=721 Score = 1387 bits (3591), Expect = 0.0, Method: Compositional matrix adjust. Identities = 663/693 (96%), Positives = 679/693 (98%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKD AA +YFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 29 MLNLYDADGKIQFDKDVLAAREYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 88 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK L+DRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 89 RNFVKALMDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 148 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 149 TGLAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 208 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 209 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 268 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYG+P Sbjct 269 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGLP 328 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPI+GK Sbjct 329 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIEGK 388 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 389 ITHSNLCSEILQVSTPSLFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 448 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGS+EGIDFTNIYFYTV Sbjct 449 LTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSEEGIDFTNIYFYTV 508 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERG F GFERSKY SGEFFDKYTDQ+WEP+T KVRQLFADA IRIP Sbjct 509 LYHALRASNRIAIERGKAFGGFERSKYKSGEFFDKYTDQVWEPQTDKVRQLFADAEIRIP 568 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDW+RLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPI SKVEIRKEGKIGRVY Sbjct 569 TQDDWKRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIASKVEIRKEGKIGRVY 628 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEY++DAYEIGYEK+IDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 629 YPAPYMTNDNLEYFQDAYEIGYEKVIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 688 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 689 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 721 >gi|289444614|ref|ZP_06434358.1| ribonucleoside-diphosphate reductase, alpha subunit [Mycobacterium tuberculosis T46] gi|289417533|gb|EFD14773.1| ribonucleoside-diphosphate reductase, alpha subunit [Mycobacterium tuberculosis T46] Length=726 Score = 1387 bits (3591), Expect = 0.0, Method: Compositional matrix adjust. Identities = 674/694 (98%), Positives = 676/694 (98%), Gaps = 1/694 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 33 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 92 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 93 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 152 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS Sbjct 153 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 212 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 213 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 272 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 273 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 332 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 333 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 392 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 393 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 452 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 453 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 512 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP Sbjct 513 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 572 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 573 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 632 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTAT-TRDVNKAQ 659 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTAT R A Sbjct 633 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATHPRREQGAD 692 Query 660 IYAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 +G + RLRQMALEGTEVEGCVSCML Sbjct 693 FTPGARGSRRCTTSRLRQMALEGTEVEGCVSCML 726 >gi|342858098|ref|ZP_08714753.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium colombiense CECT 3035] gi|342133802|gb|EGT86982.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium colombiense CECT 3035] Length=693 Score = 1385 bits (3585), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/693 (95%), Positives = 683/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLI+ENYYEREVLDQYS Sbjct 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIKENYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 121 TVLAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLSNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYG+P Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGLP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS+FN+DLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 361 ITHSNLCSEILQVSTPSVFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNN+SHAIGLGQMNLHGYLARERI YGS+EG+DFTNIYFYTV Sbjct 421 LTAVSDQTHIWSVPSIEQGNNESHAIGLGQMNLHGYLARERIRYGSEEGVDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGT F GFE+SKYASGEFFDKYT+Q+WEP T +VR++FA+AGIRIP Sbjct 481 LYHALRASNRIAIERGTAFGGFEKSKYASGEFFDKYTEQVWEPATPRVREIFAEAGIRIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQ+DW+RLKESVQ HGIYNQNLQAVPPTGSISYINHSTSSIHP+ SK+EIRKEGKIGRVY Sbjct 541 TQEDWQRLKESVQQHGIYNQNLQAVPPTGSISYINHSTSSIHPVASKIEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 601 YPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 >gi|183981656|ref|YP_001849947.1| ribonucleoside-diphosphate reductase (alpha chain) NrdE [Mycobacterium marinum M] gi|183174982|gb|ACC40092.1| ribonucleoside-diphosphate reductase (alpha chain) NrdE [Mycobacterium marinum M] Length=721 Score = 1384 bits (3581), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/693 (95%), Positives = 681/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFD+D AA Q+FLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 29 MLNLYDADGKIQFDRDVLAARQFFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 88 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLA+GD Sbjct 89 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLASGD 148 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LAE LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 149 ATLAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 208 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 209 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 268 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 269 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 328 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDD+RIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPI+GK Sbjct 329 FADISVTEKYYEMVDDSRIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIEGK 388 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSYAKVGKDISCNLGSLNIA+TMDSPDFAQTIEVAIRA Sbjct 389 ITHSNLCSEILQVSTPSLFNDDLSYAKVGKDISCNLGSLNIARTMDSPDFAQTIEVAIRA 448 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARE IFYGS+EG+DFTNIYFY V Sbjct 449 LTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNLHGYLAREHIFYGSEEGVDFTNIYFYAV 508 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIA+ERGT FKGF++SKYASGEFFDKYT+++WEPKT+KVRQLFADAGIRIP Sbjct 509 LYHALRASNRIAVERGTRFKGFDQSKYASGEFFDKYTERVWEPKTEKVRQLFADAGIRIP 568 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 QDDW+RLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 569 NQDDWQRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 628 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTN+NL+YY+DAYEIGYEKIIDTYAAAT+HVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 629 YPAPYMTNENLDYYQDAYEIGYEKIIDTYAAATEHVDQGLSLTLFFKDTATTRDVNKAQI 688 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEV GCVSCML Sbjct 689 YAWRKGIKTLYYIRLRQMALEGTEVAGCVSCML 721 >gi|108798785|ref|YP_638982.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium sp. MCS] gi|119867903|ref|YP_937855.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium sp. KMS] gi|126434386|ref|YP_001070077.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium sp. JLS] gi|108769204|gb|ABG07926.1| ribonucleoside-diphosphate reductase class Ib alpha subunit [Mycobacterium sp. MCS] gi|119693992|gb|ABL91065.1| ribonucleoside-diphosphate reductase class Ib alpha subunit [Mycobacterium sp. KMS] gi|126234186|gb|ABN97586.1| ribonucleoside-diphosphate reductase class Ib alpha subunit [Mycobacterium sp. JLS] Length=693 Score = 1381 bits (3574), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/693 (95%), Positives = 680/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYD DGKIQFDKD AA +YFLQHVNQNTVFFHNQDEKLDYLI+++YYEREVLDQYS Sbjct 1 MLNLYDKDGKIQFDKDVLAAREYFLQHVNQNTVFFHNQDEKLDYLIQKDYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 121 TTLAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLSNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYGVP Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGVP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDD+RIRKTKIKAREFFQTLAELQFESGYPYIM+EDTVNR+NPI+GK Sbjct 301 FADISVTEKYYEMVDDSRIRKTKIKAREFFQTLAELQFESGYPYIMYEDTVNRSNPIEGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS FN+DLSYAKVGKDISCNLGSLNIAK MDSPDFAQTIEVAIRA Sbjct 361 ITHSNLCSEILQVSTPSEFNDDLSYAKVGKDISCNLGSLNIAKAMDSPDFAQTIEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEG+DFTNIYFYTV Sbjct 421 LTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGVDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYT+Q WEPKT++VRQLFADAGIRIP Sbjct 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTEQPWEPKTERVRQLFADAGIRIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 QDDWRRLKESVQ HGIYNQNLQAVPPTGSISYINHSTSSIHP+ SK+EIRKEGKIGRVY Sbjct 541 NQDDWRRLKESVQQHGIYNQNLQAVPPTGSISYINHSTSSIHPVASKIEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 601 YPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 >gi|118617479|ref|YP_905811.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium ulcerans Agy99] gi|118569589|gb|ABL04340.1| ribonucleoside-diphosphate reductase (alpha chain) NrdE [Mycobacterium ulcerans Agy99] Length=693 Score = 1380 bits (3573), Expect = 0.0, Method: Compositional matrix adjust. Identities = 657/693 (95%), Positives = 680/693 (99%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFD+D AA Q+FLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 1 MLNLYDADGKIQFDRDVLAARQFFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK LLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLA+GD Sbjct 61 RNFVKALLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLASGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LAE LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 121 ATLAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDD+RIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPI+GK Sbjct 301 FADISVTEKYYEMVDDSRIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIEGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSYAKVGKDISCNLGSLNIA+TMDSPDFAQTIEVAIRA Sbjct 361 ITHSNLCSEILQVSTPSLFNDDLSYAKVGKDISCNLGSLNIARTMDSPDFAQTIEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARE IFYGS+EG+DFTNIYFY V Sbjct 421 LTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNLHGYLAREHIFYGSEEGVDFTNIYFYAV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIA+ERGT FKGF++SKYASGEFFDKYT+++WEPKT+KVRQLFADAGIRIP Sbjct 481 LYHALRASNRIAVERGTRFKGFDQSKYASGEFFDKYTERVWEPKTEKVRQLFADAGIRIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 QDDW+RLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 541 NQDDWQRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTN+NL+YY+DAYEIGYEKIIDTYAAAT+HVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 601 YPAPYMTNENLDYYQDAYEIGYEKIIDTYAAATEHVDQGLSLTLFFKDTATTRDVNKAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEV GCVSCML Sbjct 661 YAWRKGIKTLYYIRLRQMALEGTEVAGCVSCML 693 >gi|254233681|ref|ZP_04927006.1| ribonucleoside-diphosphate reductase (alpha chain) nrdE [Mycobacterium tuberculosis C] gi|124599210|gb|EAY58314.1| ribonucleoside-diphosphate reductase (alpha chain) nrdE [Mycobacterium tuberculosis C] Length=732 Score = 1378 bits (3566), Expect = 0.0, Method: Compositional matrix adjust. Identities = 665/666 (99%), Positives = 665/666 (99%), Gaps = 0/666 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 33 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 92 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 93 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 152 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS Sbjct 153 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 212 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 213 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 272 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 273 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 332 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 333 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 392 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 393 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 452 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 453 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 512 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP Sbjct 513 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 572 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 573 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 632 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 633 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 692 Query 661 YAWRKG 666 YAWR G Sbjct 693 YAWRNG 698 >gi|289751723|ref|ZP_06511101.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium tuberculosis T92] gi|289692310|gb|EFD59739.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium tuberculosis T92] Length=733 Score = 1377 bits (3563), Expect = 0.0, Method: Compositional matrix adjust. Identities = 664/666 (99%), Positives = 665/666 (99%), Gaps = 0/666 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 33 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 92 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 93 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 152 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS Sbjct 153 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 212 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 213 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 272 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 273 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 332 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 333 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 392 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 393 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 452 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 453 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 512 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP Sbjct 513 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 572 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 573 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 632 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 633 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 692 Query 661 YAWRKG 666 YAW +G Sbjct 693 YAWAQG 698 >gi|289575761|ref|ZP_06455988.1| ribonucleoside-diphosphate reductase subunit alpha nrdE [Mycobacterium tuberculosis K85] gi|289540192|gb|EFD44770.1| ribonucleoside-diphosphate reductase subunit alpha nrdE [Mycobacterium tuberculosis K85] Length=783 Score = 1372 bits (3551), Expect = 0.0, Method: Compositional matrix adjust. Identities = 662/666 (99%), Positives = 663/666 (99%), Gaps = 0/666 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 33 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 92 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 93 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 152 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS Sbjct 153 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 212 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 213 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 272 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 273 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 332 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 333 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 392 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 393 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 452 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 453 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 512 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP Sbjct 513 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 572 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 573 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 632 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 633 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 692 Query 661 YAWRKG 666 Y +G Sbjct 693 YRLAQG 698 >gi|169630494|ref|YP_001704143.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium abscessus ATCC 19977] gi|169242461|emb|CAM63489.1| Ribonucleoside-diphosphate reductase alpha subunit [Mycobacterium abscessus] Length=712 Score = 1372 bits (3551), Expect = 0.0, Method: Compositional matrix adjust. Identities = 653/693 (95%), Positives = 676/693 (98%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDA+GKIQFDKD AA QYFLQHVNQNTVFFHNQDEKLDYLI + YYEREVLDQYS Sbjct 20 MLNLYDAEGKIQFDKDAAAARQYFLQHVNQNTVFFHNQDEKLDYLIEKEYYEREVLDQYS 79 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK+LLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 80 RNFVKSLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 139 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LAE LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 140 LQLAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 199 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 200 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 259 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVER YGVP Sbjct 260 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERTYGVP 319 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADI+VTEKYYEMVD+ +IRKTKIKAREFFQTLAELQFESGYPYIM+EDTVNRANPI+GK Sbjct 320 FADINVTEKYYEMVDNGQIRKTKIKAREFFQTLAELQFESGYPYIMYEDTVNRANPIEGK 379 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 380 ITHSNLCSEILQVSTPSLFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 439 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGS+EG+DFTNIYFYTV Sbjct 440 LTAVSDQTHIWSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSEEGVDFTNIYFYTV 499 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGT F GF+RSKYASGEFFDKYTDQ+WEPKT+KVRQLFADAGIRIP Sbjct 500 LYHALRASNRIAIERGTKFGGFDRSKYASGEFFDKYTDQVWEPKTEKVRQLFADAGIRIP 559 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDW RLKESVQ HGIYNQNLQAVPPTGSISYINHSTSSIHP+ SK+EIRKEGKIGR Y Sbjct 560 TQDDWLRLKESVQQHGIYNQNLQAVPPTGSISYINHSTSSIHPVASKIEIRKEGKIGRAY 619 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTA+TRDVNKAQI Sbjct 620 YPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTASTRDVNKAQI 679 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 680 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 712 >gi|118468034|ref|YP_886648.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium smegmatis str. MC2 155] gi|118469666|ref|YP_885419.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium smegmatis str. MC2 155] gi|118169321|gb|ABK70217.1| ribonucleoside-diphosphate reductase, alpha subunit [Mycobacterium smegmatis str. MC2 155] gi|118170953|gb|ABK71849.1| ribonucleoside-diphosphate reductase, alpha subunit [Mycobacterium smegmatis str. MC2 155] Length=706 Score = 1372 bits (3551), Expect = 0.0, Method: Compositional matrix adjust. Identities = 651/693 (94%), Positives = 677/693 (98%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQF+KDREAA QYFLQHVNQNTVFFH+QDEKLDYLI YYEREVLDQYS Sbjct 14 MLNLYDADGKIQFEKDREAAKQYFLQHVNQNTVFFHSQDEKLDYLIENEYYEREVLDQYS 73 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R+F+K+LLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 74 RDFIKSLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 133 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 134 TELAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 193 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 194 KRGGGVALLLSNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 253 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYGVP Sbjct 254 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGVP 313 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FAD+SVTEKYYEMVDDARIRKTKI AREFFQTLAELQFESGYPYIMFEDTVNR+NPI GK Sbjct 314 FADVSVTEKYYEMVDDARIRKTKINAREFFQTLAELQFESGYPYIMFEDTVNRSNPIAGK 373 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS FN+DLSYAKVGKDISCNLGSLNIAK MDSPDFAQTIEVAIRA Sbjct 374 ITHSNLCSEILQVSTPSEFNDDLSYAKVGKDISCNLGSLNIAKAMDSPDFAQTIEVAIRA 433 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARERI+YGS+EGIDFTNIYFYTV Sbjct 434 LTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNLHGYLARERIYYGSEEGIDFTNIYFYTV 493 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 L+HALRASN+IAIERGTHFKGFE+SKYASGEFFDKYTDQ+WEPKT KVR+LFADA I IP Sbjct 494 LFHALRASNKIAIERGTHFKGFEKSKYASGEFFDKYTDQVWEPKTDKVRRLFADADIHIP 553 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDW++LKESVQ HGIYNQNLQAVPPTGSISYINHSTSSIHP+ SK+EIRKEGKIGRVY Sbjct 554 TQDDWKQLKESVQKHGIYNQNLQAVPPTGSISYINHSTSSIHPVASKIEIRKEGKIGRVY 613 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNL+YY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 614 YPAPYMTNDNLDYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 673 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 674 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 706 >gi|302595802|sp|P0CG99.1|RIR1A_MYCS2 RecName: Full=Ribonucleoside-diphosphate reductase subunit alpha 1; AltName: Full=Ribonucleotide reductase R1 subunit 1 gi|302595803|sp|P0CH00.1|RIR1B_MYCS2 RecName: Full=Ribonucleoside-diphosphate reductase subunit alpha 2; AltName: Full=Ribonucleotide reductase R1 subunit 2 Length=722 Score = 1372 bits (3550), Expect = 0.0, Method: Compositional matrix adjust. Identities = 651/693 (94%), Positives = 677/693 (98%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQF+KDREAA QYFLQHVNQNTVFFH+QDEKLDYLI YYEREVLDQYS Sbjct 30 MLNLYDADGKIQFEKDREAAKQYFLQHVNQNTVFFHSQDEKLDYLIENEYYEREVLDQYS 89 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R+F+K+LLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 90 RDFIKSLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 149 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 150 TELAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 209 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 210 KRGGGVALLLSNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 269 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYGVP Sbjct 270 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGVP 329 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FAD+SVTEKYYEMVDDARIRKTKI AREFFQTLAELQFESGYPYIMFEDTVNR+NPI GK Sbjct 330 FADVSVTEKYYEMVDDARIRKTKINAREFFQTLAELQFESGYPYIMFEDTVNRSNPIAGK 389 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS FN+DLSYAKVGKDISCNLGSLNIAK MDSPDFAQTIEVAIRA Sbjct 390 ITHSNLCSEILQVSTPSEFNDDLSYAKVGKDISCNLGSLNIAKAMDSPDFAQTIEVAIRA 449 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARERI+YGS+EGIDFTNIYFYTV Sbjct 450 LTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNLHGYLARERIYYGSEEGIDFTNIYFYTV 509 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 L+HALRASN+IAIERGTHFKGFE+SKYASGEFFDKYTDQ+WEPKT KVR+LFADA I IP Sbjct 510 LFHALRASNKIAIERGTHFKGFEKSKYASGEFFDKYTDQVWEPKTDKVRRLFADADIHIP 569 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDW++LKESVQ HGIYNQNLQAVPPTGSISYINHSTSSIHP+ SK+EIRKEGKIGRVY Sbjct 570 TQDDWKQLKESVQKHGIYNQNLQAVPPTGSISYINHSTSSIHPVASKIEIRKEGKIGRVY 629 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNL+YY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 630 YPAPYMTNDNLDYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 689 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 690 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 722 >gi|120403036|ref|YP_952865.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium vanbaalenii PYR-1] gi|119955854|gb|ABM12859.1| ribonucleoside-diphosphate reductase class Ib alpha subunit [Mycobacterium vanbaalenii PYR-1] Length=722 Score = 1372 bits (3550), Expect = 0.0, Method: Compositional matrix adjust. Identities = 649/693 (94%), Positives = 676/693 (98%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQF+KD +AA +YFLQHVNQNTVFFHNQDEKLDYL+++ YYEREVLDQYS Sbjct 30 MLNLYDADGKIQFEKDVQAAREYFLQHVNQNTVFFHNQDEKLDYLVQKEYYEREVLDQYS 89 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK LLDRAYAKKFRFPTF+GAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLA+GD Sbjct 90 RNFVKELLDRAYAKKFRFPTFVGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLASGD 149 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEI+DGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 150 TTLAEKLVDEIMDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 209 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 210 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 269 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYGVP Sbjct 270 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGVP 329 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIM+EDTVNRANPIDGK Sbjct 330 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMYEDTVNRANPIDGK 389 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS FN+DLSY K+GKDISCNLGSLNIAK MDSPDFAQTIEVAIRA Sbjct 390 ITHSNLCSEILQVSTPSEFNDDLSYKKIGKDISCNLGSLNIAKAMDSPDFAQTIEVAIRA 449 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEG+DFTNIYFYTV Sbjct 450 LTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGVDFTNIYFYTV 509 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGT FKGFE+SKYASGEFFDKYT+Q+WEPKT KVRQLF DAGIRIP Sbjct 510 LYHALRASNRIAIERGTAFKGFEKSKYASGEFFDKYTEQVWEPKTDKVRQLFTDAGIRIP 569 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 QDDW++LKESVQ HGIYNQNLQAVPPTGSISYINHSTSSIHPI SKVEIRKEGKIGRVY Sbjct 570 NQDDWKQLKESVQQHGIYNQNLQAVPPTGSISYINHSTSSIHPIASKVEIRKEGKIGRVY 629 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTN+NLEYY+DAYEIGYEK+IDTYAAATQHVDQGLSLTLFFKDTATTR+VNKAQI Sbjct 630 YPAPYMTNENLEYYQDAYEIGYEKVIDTYAAATQHVDQGLSLTLFFKDTATTREVNKAQI 689 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGT+VE CVSCML Sbjct 690 YAWRKGIKTLYYIRLRQMALEGTQVENCVSCML 722 >gi|289759176|ref|ZP_06518554.1| LOW QUALITY PROTEIN: ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium tuberculosis T85] gi|289714740|gb|EFD78752.1| LOW QUALITY PROTEIN: ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium tuberculosis T85] Length=693 Score = 1369 bits (3543), Expect = 0.0, Method: Compositional matrix adjust. Identities = 662/666 (99%), Positives = 664/666 (99%), Gaps = 0/666 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS Sbjct 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTD+IWEPKTQKVRQLFADAGIRIP Sbjct 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDRIWEPKTQKVRQLFADAGIRIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 Query 661 YAWRKG 666 YA +G Sbjct 661 YAGARG 666 >gi|315445212|ref|YP_004078091.1| ribonucleoside-diphosphate reductase class Ib alpha subunit [Mycobacterium sp. Spyr1] gi|315263515|gb|ADU00257.1| ribonucleoside-diphosphate reductase class Ib alpha subunit [Mycobacterium sp. Spyr1] Length=722 Score = 1365 bits (3532), Expect = 0.0, Method: Compositional matrix adjust. Identities = 649/693 (94%), Positives = 675/693 (98%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQF+KD +AA +YFLQHVNQNTVFFH+QDEKLDYLI +NYYEREVLDQYS Sbjct 30 MLNLYDADGKIQFEKDVQAAREYFLQHVNQNTVFFHSQDEKLDYLIEKNYYEREVLDQYS 89 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK LLDRAYAKKFRFPTF+GAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLA+GD Sbjct 90 RNFVKGLLDRAYAKKFRFPTFVGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLASGD 149 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEI+DGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 150 TVLAEKLVDEIMDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 209 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 210 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 269 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDI+RFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYG+P Sbjct 270 HHPDIFRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGLP 329 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIM+EDTVNRANPIDGK Sbjct 330 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMYEDTVNRANPIDGK 389 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAK MDSPDFAQTIEV+IRA Sbjct 390 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKAMDSPDFAQTIEVSIRA 449 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNN SHAIGLGQMNLHGYLARERIFYGSDEG+DFTNIYFY V Sbjct 450 LTAVSDQTHIWSVPSIEQGNNSSHAIGLGQMNLHGYLARERIFYGSDEGVDFTNIYFYCV 509 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGT F GFE+SKY SGEFFDKYTDQ+WEPKT+KVR LFADAGIRIP Sbjct 510 LYHALRASNRIAIERGTAFGGFEKSKYKSGEFFDKYTDQVWEPKTEKVRGLFADAGIRIP 569 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Q+DW++LK SVQ HGIYNQNLQAVPPTGSISYINHSTSSIHPI SKVEIRKEGKIGRVY Sbjct 570 DQEDWKQLKASVQEHGIYNQNLQAVPPTGSISYINHSTSSIHPIASKVEIRKEGKIGRVY 629 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTN+NLEYY+DAYEIGYEK+IDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 630 YPAPYMTNENLEYYQDAYEIGYEKVIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 689 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 690 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 722 >gi|145224884|ref|YP_001135562.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium gilvum PYR-GCK] gi|145217370|gb|ABP46774.1| ribonucleoside-diphosphate reductase class Ib alpha subunit [Mycobacterium gilvum PYR-GCK] Length=701 Score = 1364 bits (3530), Expect = 0.0, Method: Compositional matrix adjust. Identities = 648/693 (94%), Positives = 675/693 (98%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQF+KD +AA +YFLQHVNQNTVFFH+QDEKLDYLI +NYYEREVLDQYS Sbjct 9 MLNLYDADGKIQFEKDVQAAREYFLQHVNQNTVFFHSQDEKLDYLIEKNYYEREVLDQYS 68 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK LLDRAYAKKFRFPTF+GAFKYYTSYTLKTFDGKRYLERFEDRVVMV+LTLA+GD Sbjct 69 RNFVKGLLDRAYAKKFRFPTFVGAFKYYTSYTLKTFDGKRYLERFEDRVVMVSLTLASGD 128 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEI+DGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 129 TTLAEKLVDEIMDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 188 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 189 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 248 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDI+RFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYG+P Sbjct 249 HHPDIFRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGLP 308 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIM+EDTVNRANPIDGK Sbjct 309 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMYEDTVNRANPIDGK 368 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAK MDSPDFAQTIEV+IRA Sbjct 369 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKAMDSPDFAQTIEVSIRA 428 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNN SHAIGLGQMNLHGYLARERIFYGSDEG+DFTNIYFY V Sbjct 429 LTAVSDQTHIWSVPSIEQGNNSSHAIGLGQMNLHGYLARERIFYGSDEGVDFTNIYFYCV 488 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGT F GFE+SKY SGEFFDKYTDQ+WEPKT+KVR LFADAGIRIP Sbjct 489 LYHALRASNRIAIERGTAFGGFEKSKYKSGEFFDKYTDQVWEPKTEKVRGLFADAGIRIP 548 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Q+DW++LK SVQ HGIYNQNLQAVPPTGSISYINHSTSSIHPI SKVEIRKEGKIGRVY Sbjct 549 DQEDWKQLKASVQEHGIYNQNLQAVPPTGSISYINHSTSSIHPIASKVEIRKEGKIGRVY 608 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTN+NLEYY+DAYEIGYEK+IDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 609 YPAPYMTNENLEYYQDAYEIGYEKVIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 668 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 669 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 701 >gi|18202755|sp|Q9CBQ0.2|RIR1_MYCLE RecName: Full=Ribonucleoside-diphosphate reductase subunit alpha; AltName: Full=Ribonucleotide reductase R1 subunit Length=721 Score = 1356 bits (3510), Expect = 0.0, Method: Compositional matrix adjust. Identities = 646/693 (94%), Positives = 670/693 (97%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKD AA Q+FLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 29 MLNLYDADGKIQFDKDVLAARQFFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 88 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK+LLDRAYAKKFRF TFLGAFKYYTSYTLKTFDGKRYLER EDRV MVALTLAAGD Sbjct 89 RNFVKSLLDRAYAKKFRFSTFLGAFKYYTSYTLKTFDGKRYLERLEDRVCMVALTLAAGD 148 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRS+NSALQLS Sbjct 149 TGLAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSVNSALQLS 208 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIKNIE+QSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 209 KRGGGVALLLSNIREHGAPIKNIEHQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 268 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGV+IPDITFELAKRN+DMYLFS YDVERVY VP Sbjct 269 HHPDIYRFLDTKRENADEKIRIKTLSLGVIIPDITFELAKRNEDMYLFSSYDVERVYEVP 328 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEM+DDARIRKTKIKAREFFQ LAELQFESGYPY+MFEDTVNRANPI+GK Sbjct 329 FADISVTEKYYEMLDDARIRKTKIKAREFFQKLAELQFESGYPYVMFEDTVNRANPIEGK 388 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSYAKVGKDISCNLGSLNIAKTMDSPDFAQT+EVAIRA Sbjct 389 ITHSNLCSEILQVSTPSLFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTVEVAIRA 448 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYL+RE IFYGS+EG+DFTNIYFYTV Sbjct 449 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLSREGIFYGSEEGVDFTNIYFYTV 508 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 L+H L ASN IAIERGT FKGFERSKYASGEFFDKY +Q WEPKT KVRQLFA+A IRIP Sbjct 509 LFHVLLASNSIAIERGTFFKGFERSKYASGEFFDKYIEQTWEPKTDKVRQLFAEAAIRIP 568 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQ+DW+RLKE V AHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 569 TQNDWKRLKELVVAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 628 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNL+YY+DAYEIGY+KIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 629 YPAPYMTNDNLQYYQDAYEIGYQKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 688 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSC L Sbjct 689 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCTL 721 >gi|15827932|ref|NP_302195.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium leprae TN] gi|221230409|ref|YP_002503825.1| ribonucleotide-diphosphate reductase subunit alpha [Mycobacterium leprae Br4923] gi|13093485|emb|CAC30687.1| ribonucleoside diphosphate reductase [alpha] chain [Mycobacterium leprae] gi|219933516|emb|CAR71829.1| ribonucleoside diphosphate reductase [alpha] chain [Mycobacterium leprae Br4923] Length=693 Score = 1353 bits (3503), Expect = 0.0, Method: Compositional matrix adjust. Identities = 646/693 (94%), Positives = 670/693 (97%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKD AA Q+FLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 1 MLNLYDADGKIQFDKDVLAARQFFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK+LLDRAYAKKFRF TFLGAFKYYTSYTLKTFDGKRYLER EDRV MVALTLAAGD Sbjct 61 RNFVKSLLDRAYAKKFRFSTFLGAFKYYTSYTLKTFDGKRYLERLEDRVCMVALTLAAGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRS+NSALQLS Sbjct 121 TGLAEKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSVNSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIKNIE+QSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLSNIREHGAPIKNIEHQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGV+IPDITFELAKRN+DMYLFS YDVERVY VP Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVIIPDITFELAKRNEDMYLFSSYDVERVYEVP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEM+DDARIRKTKIKAREFFQ LAELQFESGYPY+MFEDTVNRANPI+GK Sbjct 301 FADISVTEKYYEMLDDARIRKTKIKAREFFQKLAELQFESGYPYVMFEDTVNRANPIEGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSYAKVGKDISCNLGSLNIAKTMDSPDFAQT+EVAIRA Sbjct 361 ITHSNLCSEILQVSTPSLFNDDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTVEVAIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYL+RE IFYGS+EG+DFTNIYFYTV Sbjct 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLSREGIFYGSEEGVDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 L+H L ASN IAIERGT FKGFERSKYASGEFFDKY +Q WEPKT KVRQLFA+A IRIP Sbjct 481 LFHVLLASNSIAIERGTFFKGFERSKYASGEFFDKYIEQTWEPKTDKVRQLFAEAAIRIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQ+DW+RLKE V AHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 541 TQNDWKRLKELVVAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNL+YY+DAYEIGY+KIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 601 YPAPYMTNDNLQYYQDAYEIGYQKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSC L Sbjct 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCTL 693 >gi|289746859|ref|ZP_06506237.1| ribonucleoside-diphosphate reductase alpha subunit nrdE [Mycobacterium tuberculosis 02_1987] gi|289687387|gb|EFD54875.1| ribonucleoside-diphosphate reductase alpha subunit nrdE [Mycobacterium tuberculosis 02_1987] Length=783 Score = 1346 bits (3483), Expect = 0.0, Method: Compositional matrix adjust. Identities = 649/650 (99%), Positives = 649/650 (99%), Gaps = 0/650 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS Sbjct 33 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 92 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD Sbjct 93 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 152 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS Sbjct 153 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 212 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA Sbjct 213 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 272 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 273 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 332 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 333 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 392 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA Sbjct 393 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 452 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 453 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 512 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP Sbjct 513 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 572 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY Sbjct 573 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 632 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTA 650 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDT Sbjct 633 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTG 682 >gi|333991427|ref|YP_004524041.1| ribonucleoside-diphosphate reductase (subunit alpha) NrdE [Mycobacterium sp. JDM601] gi|333487395|gb|AEF36787.1| ribonucleoside-diphosphate reductase (alpha chain) NrdE [Mycobacterium sp. JDM601] Length=704 Score = 1343 bits (3476), Expect = 0.0, Method: Compositional matrix adjust. Identities = 640/693 (93%), Positives = 668/693 (97%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYD+DGKIQFDKD AA QYFL+HVNQNTVFFHNQDEKLDYLI+++YYEREVLDQYS Sbjct 12 MLNLYDSDGKIQFDKDVLAARQYFLEHVNQNTVFFHNQDEKLDYLIQKDYYEREVLDQYS 71 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK+LLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLAAGD Sbjct 72 RNFVKSLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGD 131 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 T LAE LVDEIIDGRFQPATPTFLNSGKKQRGE VSCFLLR+EDNMESIGRSINSALQLS Sbjct 132 TKLAEQLVDEIIDGRFQPATPTFLNSGKKQRGEAVSCFLLRIEDNMESIGRSINSALQLS 191 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 192 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 251 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYGVP Sbjct 252 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGVP 311 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADISV+EKYYEMVD++ IRKTKIKAREFFQT+AELQFESGYPY+MFEDTVNRANPI GK Sbjct 312 FADISVSEKYYEMVDNSAIRKTKIKAREFFQTVAELQFESGYPYVMFEDTVNRANPIAGK 371 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS +N+DLSYAKVGKDISCNLGSLNIAK MDSPDF QTIEVAIRA Sbjct 372 ITHSNLCSEILQVSTPSEYNDDLSYAKVGKDISCNLGSLNIAKAMDSPDFGQTIEVAIRA 431 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIE GNN+SHAIGLGQMNLHGYLARE I YGS+EGIDFTNIYFYTV Sbjct 432 LTAVSDQTHINSVPSIEHGNNESHAIGLGQMNLHGYLARESIHYGSEEGIDFTNIYFYTV 491 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASNR+A+ERG F GFE+SKYASGEFFDKY +Q+WEPKT +VRQLFADAGIRIP Sbjct 492 LYHALRASNRLALERGRSFVGFEKSKYASGEFFDKYINQVWEPKTVRVRQLFADAGIRIP 551 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 Q DW+RLKESV AHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSK+EIRKEGKIGRVY Sbjct 552 EQSDWQRLKESVAAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKIEIRKEGKIGRVY 611 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYY DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVN+AQI Sbjct 612 YPAPYMTNDNLEYYSDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNRAQI 671 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 672 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 704 >gi|111023402|ref|YP_706374.1| ribonucleotide-diphosphate reductase subunit alpha [Rhodococcus jostii RHA1] gi|110822932|gb|ABG98216.1| ribonucleoside-diphosphate reductase [Rhodococcus jostii RHA1] Length=693 Score = 1330 bits (3443), Expect = 0.0, Method: Compositional matrix adjust. Identities = 626/693 (91%), Positives = 668/693 (97%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY +G+IQFDKD AA QYFLQHVNQNTVFFHN DEKLDYL+ ENYYE EVLDQYS Sbjct 1 MLNLYGPNGEIQFDKDVAAARQYFLQHVNQNTVFFHNLDEKLDYLVEENYYEPEVLDQYS 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R FVK+L+D AYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLAAGD Sbjct 61 RAFVKSLIDHAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LVDEII GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 121 EELATKLVDEIIAGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+N+REHGAPIK IENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLSNVREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVER+YGVP Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERIYGVP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FAD++VTEKYYEMVDD RIRK+KIKAREFFQT+AELQFESGYPYIMFEDTVNRANPI+GK Sbjct 301 FADVNVTEKYYEMVDDKRIRKSKIKAREFFQTIAELQFESGYPYIMFEDTVNRANPIEGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSY++VGKDISCNLGSLNIAKTMDSPDFA+TIEV+IRA Sbjct 361 ITHSNLCSEILQVSTPSLFNDDLSYSEVGKDISCNLGSLNIAKTMDSPDFARTIEVSIRA 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARERI+YGSDEGIDFTNIYFYTV Sbjct 421 LTAVSDQTHIYSVPSIEQGNNDSHAIGLGQMNLHGYLARERIYYGSDEGIDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 ++HA+RASNRIAIERGTHFKGF +SKYASGE+FDKYTDQ+WEPKT++VRQLFA++G+ IP Sbjct 481 VFHAVRASNRIAIERGTHFKGFPQSKYASGEYFDKYTDQVWEPKTERVRQLFAESGVHIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR LK SVQ +GIYNQNLQAVPPTGSISYIN+STSSIHP+ SK+EIRKEGKIGRVY Sbjct 541 TQDDWRELKASVQKYGIYNQNLQAVPPTGSISYINYSTSSIHPVASKIEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNLEYY+DAYEIGYEKI+DTYAAATQHVDQGLSLTLFFKDTATTRD+NKAQI Sbjct 601 YPAPYLTNDNLEYYQDAYEIGYEKIVDTYAAATQHVDQGLSLTLFFKDTATTRDINKAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 >gi|325675840|ref|ZP_08155524.1| ribonucleotide-diphosphate reductase subunit alpha [Rhodococcus equi ATCC 33707] gi|325553811|gb|EGD23489.1| ribonucleotide-diphosphate reductase subunit alpha [Rhodococcus equi ATCC 33707] Length=728 Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust. Identities = 631/693 (92%), Positives = 663/693 (96%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY G+IQFDKDREAA QYFLQHVNQNTVFFHN DEKLDYL+RENYYEREVLDQYS Sbjct 36 MLNLYGPSGEIQFDKDREAAKQYFLQHVNQNTVFFHNLDEKLDYLVRENYYEREVLDQYS 95 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK L+DRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLAAGD Sbjct 96 RNFVKWLIDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGD 155 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LVDEII GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 156 ETLATELVDEIIAGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 215 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTN+REHGAPIK IENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 216 KRGGGVALLLTNVREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 275 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVER+YGVP Sbjct 276 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERIYGVP 335 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADI+VTEKY+EMVDD RIRK+KIKAREFFQTLAELQFESGYPYIMFEDTVNRANPI GK Sbjct 336 FADINVTEKYHEMVDDKRIRKSKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIAGK 395 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS FN+DLSY+ VGKDISCNLGSLNIA TMDSPDFA+TIE +IRA Sbjct 396 ITHSNLCSEILQVSTPSTFNDDLSYSHVGKDISCNLGSLNIALTMDSPDFAKTIETSIRA 455 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGS+EGIDFTNIYFY+V Sbjct 456 LTAVSDQTHIYSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSEEGIDFTNIYFYSV 515 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 +YHA+RASN IA ERGTHFKGF S YASG++FDKYTDQ+WEPKT+KVRQLFADAGI IP Sbjct 516 VYHAIRASNLIAKERGTHFKGFPESDYASGKYFDKYTDQVWEPKTEKVRQLFADAGIHIP 575 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR LK SVQ +GIYNQNLQAVPPTGSISYIN+STSSIHP+ +K+EIRKEGKIGRVY Sbjct 576 TQDDWRELKASVQQYGIYNQNLQAVPPTGSISYINNSTSSIHPVAAKIEIRKEGKIGRVY 635 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVN+AQI Sbjct 636 YPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNRAQI 695 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 696 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 728 >gi|312140540|ref|YP_004007876.1| ribonucleoside-diphosphate reductase nrde [Rhodococcus equi 103S] gi|311889879|emb|CBH49196.1| ribonucleoside-diphosphate reductase NrdE [Rhodococcus equi 103S] Length=701 Score = 1328 bits (3437), Expect = 0.0, Method: Compositional matrix adjust. Identities = 631/693 (92%), Positives = 663/693 (96%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY G+IQFDKDREAA QYFLQHVNQNTVFFHN DEKLDYL+RENYYEREVLDQYS Sbjct 9 MLNLYGPSGEIQFDKDREAAKQYFLQHVNQNTVFFHNLDEKLDYLVRENYYEREVLDQYS 68 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK L+DRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLAAGD Sbjct 69 RNFVKWLIDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGD 128 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LVDEII GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 129 ETLATELVDEIIAGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 188 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTN+REHGAPIK IENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 189 KRGGGVALLLTNVREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 248 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVER+YGVP Sbjct 249 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERIYGVP 308 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADI+VTEKY+EMVDD RIRK+KIKAREFFQTLAELQFESGYPYIMFEDTVNRANPI GK Sbjct 309 FADINVTEKYHEMVDDKRIRKSKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIAGK 368 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS FN+DLSY+ VGKDISCNLGSLNIA TMDSPDFA+TIE +IRA Sbjct 369 ITHSNLCSEILQVSTPSTFNDDLSYSHVGKDISCNLGSLNIALTMDSPDFAKTIETSIRA 428 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGS+EGIDFTNIYFY+V Sbjct 429 LTAVSDQTHIYSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSEEGIDFTNIYFYSV 488 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 +YHA+RASN IA ERGTHFKGF S YASG++FDKYTDQ+WEPKT+KVRQLFADAGI IP Sbjct 489 VYHAIRASNLIAKERGTHFKGFPESDYASGKYFDKYTDQVWEPKTEKVRQLFADAGIHIP 548 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR LK SVQ +GIYNQNLQAVPPTGSISYIN+STSSIHP+ +K+EIRKEGKIGRVY Sbjct 549 TQDDWRELKASVQQYGIYNQNLQAVPPTGSISYINNSTSSIHPVAAKIEIRKEGKIGRVY 608 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVN+AQI Sbjct 609 YPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNRAQI 668 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 669 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 701 >gi|229493417|ref|ZP_04387206.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodococcus erythropolis SK121] gi|229319733|gb|EEN85565.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodococcus erythropolis SK121] Length=727 Score = 1316 bits (3405), Expect = 0.0, Method: Compositional matrix adjust. Identities = 625/693 (91%), Positives = 660/693 (96%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY A+G+IQF+ D AA QYFLQHVNQNTVFFHN DEKLDYL+ ENYYE EVLDQYS Sbjct 35 MLNLYGANGEIQFEMDVAAARQYFLQHVNQNTVFFHNLDEKLDYLVEENYYEPEVLDQYS 94 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R FVK L+D AYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLAAG+ Sbjct 95 RTFVKFLIDHAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGN 154 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LVDEII GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 155 EDLAVELVDEIIAGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 214 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTN+REHGAPIK IENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 215 KRGGGVALLLTNVREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 274 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVER+YGVP Sbjct 275 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERIYGVP 334 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 F+DI+V+EKYYEMVDD RIRK+KIKAREFFQT+AELQFESGYPYIMFEDTVNRANPI+GK Sbjct 335 FSDINVSEKYYEMVDDKRIRKSKIKAREFFQTVAELQFESGYPYIMFEDTVNRANPIEGK 394 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSY+KVGKDISCNLGSLNIAKTMDSPDFA+TIEV+IR Sbjct 395 ITHSNLCSEILQVSTPSLFNDDLSYSKVGKDISCNLGSLNIAKTMDSPDFAKTIEVSIRG 454 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGS+EGIDFTNIYFYTV Sbjct 455 LTAVSDQTHIYSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSEEGIDFTNIYFYTV 514 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 L+HALRASN+IAIERG++FKGF SKYASGEFFDKYTDQ WEP T KVR LFADA + IP Sbjct 515 LFHALRASNKIAIERGSYFKGFPESKYASGEFFDKYTDQAWEPATDKVRGLFADAKLHIP 574 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR LK SVQ HGIYNQNLQAVPPTGSISYIN+STSSIHP+ SK+EIRKEGKIGRVY Sbjct 575 TQDDWRELKASVQKHGIYNQNLQAVPPTGSISYINYSTSSIHPVASKIEIRKEGKIGRVY 634 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNLEYY+DAYEIGYEKI+DTYAAATQHVDQGLSLTLFFKDTATTRD+NKAQI Sbjct 635 YPAPYLTNDNLEYYQDAYEIGYEKIVDTYAAATQHVDQGLSLTLFFKDTATTRDINKAQI 694 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 695 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 727 >gi|226305839|ref|YP_002765799.1| ribonucleoside-diphosphate reductase alpha chain [Rhodococcus erythropolis PR4] gi|226184956|dbj|BAH33060.1| ribonucleoside-diphosphate reductase alpha chain [Rhodococcus erythropolis PR4] Length=727 Score = 1315 bits (3404), Expect = 0.0, Method: Compositional matrix adjust. Identities = 625/693 (91%), Positives = 660/693 (96%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY A+G+IQF+ D AA QYFLQHVNQNTVFFHN DEKLDYL+ ENYYE EVLDQYS Sbjct 35 MLNLYGANGEIQFEMDVAAARQYFLQHVNQNTVFFHNLDEKLDYLVEENYYEPEVLDQYS 94 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R FVK L+D AYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLAAG+ Sbjct 95 RTFVKFLIDHAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGN 154 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LVDEII GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 155 EDLAVELVDEIIAGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 214 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTN+REHGAPIK IENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 215 KRGGGVALLLTNVREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 274 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVER+YGVP Sbjct 275 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERIYGVP 334 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 F+DI+V+EKYYEMVDD RIRK+KIKAREFFQT+AELQFESGYPYIMFEDTVNRANPI+GK Sbjct 335 FSDINVSEKYYEMVDDKRIRKSKIKAREFFQTVAELQFESGYPYIMFEDTVNRANPIEGK 394 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSLFN+DLSY+KVGKDISCNLGSLNIAKTMDSPDFA+TIEV+IR Sbjct 395 ITHSNLCSEILQVSTPSLFNDDLSYSKVGKDISCNLGSLNIAKTMDSPDFAKTIEVSIRG 454 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGS EGIDFTNIYFYTV Sbjct 455 LTAVSDQTHIYSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSVEGIDFTNIYFYTV 514 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 L+HALRASN+IAIERG++FKGF SKYASGEFFDKYTDQ+WEP T KVR LFADA + IP Sbjct 515 LFHALRASNKIAIERGSYFKGFPESKYASGEFFDKYTDQVWEPATDKVRGLFADAKLHIP 574 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR LK SVQ HGIYNQNLQAVPPTGSISYIN+STSSIHP+ SK+EIRKEGKIGRVY Sbjct 575 TQDDWRELKASVQKHGIYNQNLQAVPPTGSISYINYSTSSIHPVASKIEIRKEGKIGRVY 634 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNLEYY+DAYEIGYEKI+DTYAAATQHVDQGLSLTLFFKDTATTRD+NKAQI Sbjct 635 YPAPYLTNDNLEYYQDAYEIGYEKIVDTYAAATQHVDQGLSLTLFFKDTATTRDINKAQI 694 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 695 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 727 >gi|226365903|ref|YP_002783686.1| ribonucleotide-diphosphate reductase subunit alpha [Rhodococcus opacus B4] gi|226244393|dbj|BAH54741.1| ribonucleoside-diphosphate reductase alpha chain [Rhodococcus opacus B4] Length=711 Score = 1313 bits (3398), Expect = 0.0, Method: Compositional matrix adjust. Identities = 617/693 (90%), Positives = 663/693 (96%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY +G+IQF+KDREAA+QYFLQHVNQNTVFFHNQDEKLDYL++ENYYEREVLDQY+ Sbjct 19 MLNLYGPNGEIQFEKDREAANQYFLQHVNQNTVFFHNQDEKLDYLVKENYYEREVLDQYT 78 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFVK+L+D AY+KKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLAAGD Sbjct 79 RNFVKSLIDHAYSKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGD 138 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LVDEII GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 139 EELATKLVDEIIAGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 198 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+N+REHGAPIK IENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 199 KRGGGVALLLSNVREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 258 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVER+YGVP Sbjct 259 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERIYGVP 318 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADI+VTEKYYEMVDD RIRK+KIKAREFFQT+AELQFESGYPYIM+EDTVNRANPI GK Sbjct 319 FADINVTEKYYEMVDDKRIRKSKIKAREFFQTVAELQFESGYPYIMYEDTVNRANPIAGK 378 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 +THSNLCSEILQVSTPS FN+DLSY+ +GKDISCNLGSLNIAKTMDSPDFAQTIE +IRA Sbjct 379 VTHSNLCSEILQVSTPSEFNDDLSYSHIGKDISCNLGSLNIAKTMDSPDFAQTIETSIRA 438 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAV+DQT I SVPSI++ N++ HAIGLGQMNLHGYLARERI YGSDEGIDFTNIYFYTV Sbjct 439 LTAVADQTSIDSVPSIKKANDEGHAIGLGQMNLHGYLARERIHYGSDEGIDFTNIYFYTV 498 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 ++HA+RASN IA ERGT+F GF SKYASGE+FDKYTDQ+WEPKT++VRQLFADAG+ IP Sbjct 499 VFHAIRASNEIAKERGTYFAGFPESKYASGEYFDKYTDQVWEPKTERVRQLFADAGLHIP 558 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR LK SVQ HGIYNQNLQAVPPTGSISYIN+STSSIHP+ SK+EIRKEGKIGRVY Sbjct 559 TQDDWRELKASVQQHGIYNQNLQAVPPTGSISYINNSTSSIHPVASKIEIRKEGKIGRVY 618 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRD+NKAQI Sbjct 619 YPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDINKAQI 678 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 679 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 711 >gi|262203178|ref|YP_003274386.1| ribonucleoside-diphosphate reductase subunit alpha [Gordonia bronchialis DSM 43247] gi|262086525|gb|ACY22493.1| ribonucleoside-diphosphate reductase, alpha subunit [Gordonia bronchialis DSM 43247] Length=731 Score = 1306 bits (3380), Expect = 0.0, Method: Compositional matrix adjust. Identities = 623/693 (90%), Positives = 652/693 (95%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADG+IQF+KDREAA QYFLQHVNQNTVFFH+ DEKLDYL+ ENYYE EVL +Y Sbjct 39 MLNLYDADGRIQFEKDREAARQYFLQHVNQNTVFFHDLDEKLDYLVEENYYEPEVLARYD 98 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R FVK+L AYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLA GD Sbjct 99 REFVKSLFGHAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLADGD 158 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALA LVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 159 TALARNLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 218 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIK IENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 219 KRGGGVALLLSNIREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 278 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITF+LAK NDDMYLFSPYDVERVYGVP Sbjct 279 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFQLAKANDDMYLFSPYDVERVYGVP 338 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADI+VT+KY+EMV+D RIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK Sbjct 339 FADINVTDKYHEMVEDKRIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 398 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS FN+DLSY+ VGKDISCNLGSLNIAK MDSPD QTIE AIR Sbjct 399 ITHSNLCSEILQVSTPSTFNDDLSYSHVGKDISCNLGSLNIAKAMDSPDLGQTIETAIRG 458 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQT I SVPSIE+GNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 459 LTAVSDQTAITSVPSIEKGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 518 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALRASN+IA ERG F GFE+SKYASGEFFDKYT+++WEP+TQKVR LF AGI IP Sbjct 519 LYHALRASNKIARERGHSFAGFEKSKYASGEFFDKYTEKVWEPETQKVRDLFGQAGIHIP 578 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR LK +V GIYNQNLQAVPPTGSISYINHSTSSIHP+ SK+EIRKEGKIGRVY Sbjct 579 TQDDWRELKAAVARDGIYNQNLQAVPPTGSISYINHSTSSIHPVASKIEIRKEGKIGRVY 638 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAP+M NDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVN+AQI Sbjct 639 YPAPFMDNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNRAQI 698 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 699 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 731 >gi|343926905|ref|ZP_08766398.1| ribonucleoside-diphosphate reductase alpha chain [Gordonia alkanivorans NBRC 16433] gi|343763265|dbj|GAA13324.1| ribonucleoside-diphosphate reductase alpha chain [Gordonia alkanivorans NBRC 16433] Length=731 Score = 1306 bits (3379), Expect = 0.0, Method: Compositional matrix adjust. Identities = 623/693 (90%), Positives = 652/693 (95%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAA QYFLQHVNQNTVFFH+ DEKLDYL+ ENYYE EVLD+Y Sbjct 39 MLNLYDADGKIQFDKDREAARQYFLQHVNQNTVFFHDLDEKLDYLVEENYYEPEVLDKYD 98 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R FVK L AY KKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLA GD Sbjct 99 REFVKGLFKHAYDKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLADGD 158 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALA LVDEII GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 159 TALARNLVDEIISGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 218 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIK IENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 219 KRGGGVALLLSNIREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 278 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITF+LAK NDDMYLFSPYDVERVYGVP Sbjct 279 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFQLAKNNDDMYLFSPYDVERVYGVP 338 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADI+VT++Y+EMV+D RIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNR+NPIDGK Sbjct 339 FADINVTDRYHEMVEDRRIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRSNPIDGK 398 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVST S FN+DLSY++VGKDISCNLGSLNIAKTMDSPD QTIE AIR Sbjct 399 ITHSNLCSEILQVSTASTFNDDLSYSQVGKDISCNLGSLNIAKTMDSPDIGQTIETAIRG 458 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQT I SVPSIE GNN+SHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV Sbjct 459 LTAVSDQTSITSVPSIEHGNNNSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 518 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 L+HALRASNRIA ERG F GFE+SKYASGEFFDKYT ++WEP+TQKVR +F AGI IP Sbjct 519 LFHALRASNRIARERGRAFTGFEKSKYASGEFFDKYTAKVWEPETQKVRDIFGQAGIHIP 578 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR LKE+VQ GIYNQNLQAVPPTGSISYINHSTSSIHP+ +K+EIRKEGKIGRVY Sbjct 579 TQDDWRELKEAVQRDGIYNQNLQAVPPTGSISYINHSTSSIHPVAAKIEIRKEGKIGRVY 638 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI Sbjct 639 YPAPYMTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 698 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQ+ALEGTEVEGCVSCML Sbjct 699 YAWRKGIKTLYYIRLRQIALEGTEVEGCVSCML 731 >gi|333921314|ref|YP_004494895.1| ribonucleoside-diphosphate reductase [Amycolicicoccus subflavus DQS3-9A1] gi|333483535|gb|AEF42095.1| Ribonucleoside-diphosphate reductase [Amycolicicoccus subflavus DQS3-9A1] Length=721 Score = 1293 bits (3346), Expect = 0.0, Method: Compositional matrix adjust. Identities = 612/693 (89%), Positives = 653/693 (95%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY DGKIQ DKDREAA QYFLQHVNQNTVFFH+ DEKLDYLI +YYE EVLDQY Sbjct 29 MLNLYSPDGKIQLDKDREAARQYFLQHVNQNTVFFHDLDEKLDYLIEHDYYETEVLDQYD 88 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R FVK L RAY KKFRFPTF+GAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLAAG+ Sbjct 89 REFVKALFQRAYKKKFRFPTFVGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGE 148 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LAE LVDE+I GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGR+INSALQLS Sbjct 149 RPLAERLVDEMISGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRAINSALQLS 208 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIK IENQSSGVIP+MKLLED+FSYANQLGARQGAGAVYLHA Sbjct 209 KRGGGVALLLSNIREHGAPIKKIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHA 268 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITF LAK+N+DMYLFSPYDVERVYGVP Sbjct 269 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKKNEDMYLFSPYDVERVYGVP 328 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADI+VTEKYYEMVDD RIRKTKIKAREFFQT+AELQFESGYPYIMFEDTVNRANPI GK Sbjct 329 FADINVTEKYYEMVDDKRIRKTKIKAREFFQTIAELQFESGYPYIMFEDTVNRANPIKGK 388 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPSL+N+DLSY+++GKDISCNLGSLNIAKTMDSP+F +T+EVAIRA Sbjct 389 ITHSNLCSEILQVSTPSLYNDDLSYSEIGKDISCNLGSLNIAKTMDSPNFGETVEVAIRA 448 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIE+GNNDSHAIGLGQMNLHGYLARE I YGSDEG+DFTNIYFY+V Sbjct 449 LTAVSDQTHITSVPSIEKGNNDSHAIGLGQMNLHGYLAREYIQYGSDEGVDFTNIYFYSV 508 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 L+HALRASN +AIERGT+FKGF SKYASGEFFDKYT++ W+P+T +V++LF DAGI IP Sbjct 509 LFHALRASNNLAIERGTYFKGFPDSKYASGEFFDKYTEREWKPRTPRVQKLFDDAGIHIP 568 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQ+DW LK SVQ HGIYNQNLQAVPPTGSISYINHSTSSIHPI SK+EIRKEGKIGRVY Sbjct 569 TQEDWLELKASVQEHGIYNQNLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVY 628 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYMTNDNLEY++DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDT TTRD+N+AQI Sbjct 629 YPAPYMTNDNLEYFQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTVTTRDLNRAQI 688 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 689 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 721 >gi|296140661|ref|YP_003647904.1| ribonucleoside-diphosphate reductase subunit alpha [Tsukamurella paurometabola DSM 20162] gi|296028795|gb|ADG79565.1| ribonucleoside-diphosphate reductase, alpha subunit [Tsukamurella paurometabola DSM 20162] Length=727 Score = 1288 bits (3333), Expect = 0.0, Method: Compositional matrix adjust. Identities = 616/693 (89%), Positives = 644/693 (93%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYD DG IQFDKDREAA QYFLQHVNQNTVFFHN DEKLDYL+ ENYYE EVLD+YS Sbjct 35 MLNLYDRDGNIQFDKDREAARQYFLQHVNQNTVFFHNLDEKLDYLVEENYYEPEVLDKYS 94 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R FVK L D AYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLA GD Sbjct 95 RAFVKNLFDAAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLADGD 154 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LVDEII GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 155 EKLATSLVDEIIAGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 214 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIK IENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 215 KRGGGVALLLSNIREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 274 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK NDDMYLFSPYDVERVYGVP Sbjct 275 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKNNDDMYLFSPYDVERVYGVP 334 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FAD++VTEKY+EMVDD+RIRKTKI AREFFQTLAELQFESGYPYIM+EDTVNRANPI GK Sbjct 335 FADVNVTEKYHEMVDDSRIRKTKINAREFFQTLAELQFESGYPYIMYEDTVNRANPIAGK 394 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS +N+DLSYA++GKDISCNLGSLNIAKTMDSPDF TIE AIR Sbjct 395 ITHSNLCSEILQVSTPSTYNDDLSYAEIGKDISCNLGSLNIAKTMDSPDFGATIETAIRG 454 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQT I SVPSIE GNN SHAIGLGQMNLHGYLARER+FYGS+EG+DFTNIYFYTV Sbjct 455 LTAVSDQTAITSVPSIEHGNNLSHAIGLGQMNLHGYLARERVFYGSEEGVDFTNIYFYTV 514 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 L+HA+RASN IA ERG F GFE SKYASGEFFDKY DQ W+P T KV LFAD+ IRIP Sbjct 515 LFHAIRASNAIARERGQSFGGFEDSKYASGEFFDKYIDQEWKPATDKVIGLFADSEIRIP 574 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR LK VQ +G+YNQNLQAVPPTGSISYINHSTSSIHP+ +K+EIRKEGKIGRVY Sbjct 575 TQDDWRALKADVQQYGLYNQNLQAVPPTGSISYINHSTSSIHPVAAKIEIRKEGKIGRVY 634 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPYM NDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVN+AQI Sbjct 635 YPAPYMDNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNRAQI 694 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML Sbjct 695 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 727 >gi|326381480|ref|ZP_08203174.1| ribonucleotide-diphosphate reductase subunit alpha [Gordonia neofelifaecis NRRL B-59395] gi|326199727|gb|EGD56907.1| ribonucleotide-diphosphate reductase subunit alpha [Gordonia neofelifaecis NRRL B-59395] Length=705 Score = 1282 bits (3318), Expect = 0.0, Method: Compositional matrix adjust. Identities = 609/705 (87%), Positives = 655/705 (93%), Gaps = 12/705 (1%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADG IQFDKDREAA QYFLQHVNQNTVFFH+ DEKLDYLI+ENYYE EVL +Y Sbjct 1 MLNLYDADGNIQFDKDREAARQYFLQHVNQNTVFFHDLDEKLDYLIKENYYEPEVLAKYD 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R FVK L AY+KKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVALTLA GD Sbjct 61 REFVKLLFGHAYSKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLADGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 TALA LVDEI+DGRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 121 TALARHLVDEIMDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+N+REHGAPIK IENQSSGVIPIMKLLED+FSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLSNVREHGAPIKRIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITF+LAK NDDMYLFSPYDVERVYG P Sbjct 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFQLAKDNDDMYLFSPYDVERVYGKP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FAD++V+++Y+ MV+D RIRK+KIKAREFFQTLAELQFESGYPYIMFEDTVNR+NPIDGK Sbjct 301 FADVNVSDEYHAMVEDRRIRKSKIKAREFFQTLAELQFESGYPYIMFEDTVNRSNPIDGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 +THSNLCSEILQVSTPS FNEDL+Y++VGKDISCNLGS+NIAKTMDSPDF Q+IE AIR Sbjct 361 VTHSNLCSEILQVSTPSEFNEDLTYSQVGKDISCNLGSMNIAKTMDSPDFGQSIETAIRG 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAV+DQT I+SVPSI++ N++ HAIGLGQMNLHGYLARERIFYGS+EGIDFTN+YFYTV Sbjct 421 LTAVADQTSIESVPSIKRANDEGHAIGLGQMNLHGYLARERIFYGSEEGIDFTNMYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVR----------- 529 L+HA+RASN+IA ERGT F GFE+SKYASGEFFDKYTDQ+WEP T+KVR Sbjct 481 LFHAIRASNKIAKERGTTFAGFEKSKYASGEFFDKYTDQVWEPATEKVREIFANAGPGES 540 Query 530 -QLFADAGIRIPTQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKV 588 QLF+D GI IPTQDDWR LK SVQ +GIYNQNLQAVPPTGSISYINHSTSSIHP+ SK+ Sbjct 541 GQLFSDNGIHIPTQDDWRELKASVQKYGIYNQNLQAVPPTGSISYINHSTSSIHPVASKI 600 Query 589 EIRKEGKIGRVYYPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKD 648 EIRKEGKIGRVYYPAPY+TNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKD Sbjct 601 EIRKEGKIGRVYYPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKD 660 Query 649 TATTRDVNKAQIYAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 TA+TRDVNKAQIYAWRKGIKTLYYIRLRQMALEGTEVE CVSCML Sbjct 661 TASTRDVNKAQIYAWRKGIKTLYYIRLRQMALEGTEVENCVSCML 705 >gi|319948550|ref|ZP_08022681.1| ribonucleotide-diphosphate reductase subunit alpha [Dietzia cinnamea P4] gi|319437797|gb|EFV92786.1| ribonucleotide-diphosphate reductase subunit alpha [Dietzia cinnamea P4] Length=693 Score = 1274 bits (3296), Expect = 0.0, Method: Compositional matrix adjust. Identities = 600/693 (87%), Positives = 649/693 (94%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADG IQFDKDR+AA +YFLQHVNQNTVFFHN DEKLDYL+ ++YYEREVLDQY+ Sbjct 1 MLNLYDADGNIQFDKDRQAAREYFLQHVNQNTVFFHNLDEKLDYLVEKDYYEREVLDQYT 60 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 RNFV+ L D AYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLER+EDRV MVALTLAAGD Sbjct 61 RNFVRELFDHAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERYEDRVCMVALTLAAGD 120 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LVDEII+GRFQPATPTFLNSGKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 121 ETLARQLVDEIIEGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 180 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+N+REHGAPIK+IENQSSGVIP+MKLLED+FSYANQLGARQGAGAVYLHA Sbjct 181 KRGGGVALLLSNLREHGAPIKHIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHA 240 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIY+FLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVER+YG P Sbjct 241 HHPDIYKFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERIYGKP 300 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FAD+ ++ Y+EMV+D+RI+KTKI AR FFQT+AELQFESGYPYIM+EDTVNRANPI GK Sbjct 301 FADVDISANYHEMVEDSRIKKTKINARHFFQTVAELQFESGYPYIMYEDTVNRANPIAGK 360 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVST S FNEDL+Y+ VGKDISCNLGSLNIAK MDSPDF +TIE AIR Sbjct 361 ITHSNLCSEILQVSTASEFNEDLTYSHVGKDISCNLGSLNIAKAMDSPDFGRTIETAIRG 420 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPSIE+GN++SHAIGLGQMNLHGYLARERI YGS+EGIDFTNIYFYTV Sbjct 421 LTAVSDQTHINSVPSIERGNSESHAIGLGQMNLHGYLARERIHYGSEEGIDFTNIYFYTV 480 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHALR+SN IA ERGT F GF SKYASGEFFDKYTDQ WEP T +VRQLFA+A + IP Sbjct 481 LYHALRSSNLIARERGTWFAGFPESKYASGEFFDKYTDQTWEPATDRVRQLFAEAEVAIP 540 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQ+DWR LK VQ +GIYNQNLQAVPPTGSISYIN+STSSIHP+ SK+EIRKEGKIGRVY Sbjct 541 TQEDWRALKADVQKYGIYNQNLQAVPPTGSISYINNSTSSIHPVASKIEIRKEGKIGRVY 600 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNL+YY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTR+VN+AQI Sbjct 601 YPAPYLTNDNLDYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTREVNRAQI 660 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIR+RQ+ALEGTEVEGCVSCML Sbjct 661 YAWRKGIKTLYYIRVRQLALEGTEVEGCVSCML 693 >gi|317506845|ref|ZP_07964617.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974] gi|316254773|gb|EFV14071.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974] Length=728 Score = 1268 bits (3282), Expect = 0.0, Method: Compositional matrix adjust. Identities = 601/693 (87%), Positives = 641/693 (93%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY +G+IQF+KDREAA+QYFLQHVNQNTVFFHN EKLDYL+ YYE EVL +YS Sbjct 36 MLNLYGPNGEIQFEKDREAANQYFLQHVNQNTVFFHNLSEKLDYLVENEYYEPEVLGRYS 95 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R FVK L D+AYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVAL LA GD Sbjct 96 REFVKGLFDQAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALALADGD 155 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LV+EII+GRFQPATPTFLN GKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 156 EELASQLVEEIIEGRFQPATPTFLNCGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 215 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIRE GAPIK IENQSSGVIP+MKLLED+FSYANQLGARQGAGAVYLHA Sbjct 216 KRGGGVALLLTNIREAGAPIKQIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHA 275 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDI RFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 276 HHPDIMRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 335 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FA++SVTEKY+EMVDD RIRK KI AREFFQT+AELQFESGYPYIM+EDTVNRANPIDG+ Sbjct 336 FAEVSVTEKYFEMVDDERIRKKKINAREFFQTIAELQFESGYPYIMYEDTVNRANPIDGR 395 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVST S FN DLSY+ +GKDISCNLGSLNIAKTMDSPDF +T+E +IRA Sbjct 396 ITHSNLCSEILQVSTASTFNADLSYSHIGKDISCNLGSLNIAKTMDSPDFGRTVETSIRA 455 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LT+VSDQT I SVPSI +GN SHAIGLGQMNLHGYLARERI YGS+EGIDFTNIYFYTV Sbjct 456 LTSVSDQTRIDSVPSIAEGNEQSHAIGLGQMNLHGYLARERIHYGSEEGIDFTNIYFYTV 515 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHAL ASN+IAIERG F GFERSKYASGEFF+KY Q WEPKT++VR+LF AG+ IP Sbjct 516 LYHALSASNKIAIERGRAFTGFERSKYASGEFFEKYLTQSWEPKTERVRELFERAGVAIP 575 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 T DW+RLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHP+ +K+EIRKEGKIGRVY Sbjct 576 TVADWQRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPVAAKIEIRKEGKIGRVY 635 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+ NDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRD+NKAQI Sbjct 636 YPAPYLANDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDINKAQI 695 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQ+ALEGTEVEGCVSC L Sbjct 696 YAWRKGIKTLYYIRLRQLALEGTEVEGCVSCTL 728 >gi|296393702|ref|YP_003658586.1| ribonucleoside-diphosphate reductase subunit alpha [Segniliparus rotundus DSM 44985] gi|296180849|gb|ADG97755.1| ribonucleoside-diphosphate reductase, alpha subunit [Segniliparus rotundus DSM 44985] Length=732 Score = 1262 bits (3266), Expect = 0.0, Method: Compositional matrix adjust. Identities = 598/693 (87%), Positives = 644/693 (93%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY +G+IQF+KDREAA+QYFLQHVNQNTVFFHN DEKLDYL+ YYE EVL++YS Sbjct 40 MLNLYGPNGEIQFEKDREAANQYFLQHVNQNTVFFHNLDEKLDYLVENEYYEPEVLERYS 99 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R FVK L D+AYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVAL LA GD Sbjct 100 RPFVKGLFDQAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALALADGD 159 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LV+EII+GRFQPATPTFLN GKKQRGEPVSCFLLR+EDNMESIGRSINSALQLS Sbjct 160 EELACQLVEEIIEGRFQPATPTFLNCGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS 219 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLLTNIRE GAPIK IENQSSGVIP+MKLLED+FSYANQLGARQGAGAVYLHA Sbjct 220 KRGGGVALLLTNIREAGAPIKQIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHA 279 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDI RFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP Sbjct 280 HHPDIMRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 339 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FA++SVTEKY+EMVDD RIRK KI AREFFQT+AELQFESGYPYIM+EDTVNRANPIDG+ Sbjct 340 FAEVSVTEKYFEMVDDERIRKKKINAREFFQTIAELQFESGYPYIMYEDTVNRANPIDGR 399 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVST S FN DLSY+ VGKDISCNLGSLNIAKTMDSPDF +T+E +IRA Sbjct 400 ITHSNLCSEILQVSTASTFNADLSYSHVGKDISCNLGSLNIAKTMDSPDFGKTVETSIRA 459 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LT+VSDQT I SVPSI GN++SHAIGLGQMNLHGYLARERI YGS+EG+DFTNIYFYTV Sbjct 460 LTSVSDQTRIDSVPSIAHGNDESHAIGLGQMNLHGYLARERIHYGSEEGVDFTNIYFYTV 519 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHAL ASN+IA+ERG F GFERSKYASGEFFDKY +Q WEPKT++VR+LF A ++IP Sbjct 520 LYHALWASNKIAVERGRAFAGFERSKYASGEFFDKYLNQTWEPKTERVRELFKRAKVQIP 579 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 T+ DW RLK+SV AHGIYNQNLQAVPPTGSISYINHSTSSIHP+ +K+EIRKEGKIGRVY Sbjct 580 TKADWERLKDSVVAHGIYNQNLQAVPPTGSISYINHSTSSIHPVAAKIEIRKEGKIGRVY 639 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+ NDNL+YY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRD+NKAQI Sbjct 640 YPAPYLANDNLDYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDINKAQI 699 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQ+ALEGTEVEGCVSC L Sbjct 700 YAWRKGIKTLYYIRLRQLALEGTEVEGCVSCTL 732 >gi|332671992|ref|YP_004455000.1| ribonucleoside-diphosphate reductase subunit alpha [Cellulomonas fimi ATCC 484] gi|332341030|gb|AEE47613.1| ribonucleoside-diphosphate reductase, alpha subunit [Cellulomonas fimi ATCC 484] Length=715 Score = 1240 bits (3208), Expect = 0.0, Method: Compositional matrix adjust. Identities = 584/693 (85%), Positives = 634/693 (92%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLYDADGKIQFDKDREAA QYFLQHVNQNTVFFH+ DEKLDYL+ YY+ VL QY Sbjct 23 MLNLYDADGKIQFDKDREAARQYFLQHVNQNTVFFHDLDEKLDYLVENKYYDPAVLAQYD 82 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R F+KTL + AY+KKFRF TFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVAL+LAAGD Sbjct 83 RAFIKTLFEYAYSKKFRFQTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALSLAAGD 142 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 A LVDEI+ GRFQPATPTFLN GK QRGEPVSCFLLR+EDNMESI R INSALQLS Sbjct 143 QDFAVNLVDEIVSGRFQPATPTFLNLGKAQRGEPVSCFLLRIEDNMESIARGINSALQLS 202 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIREHGAPIK+IENQSSGVIP+MKLLED+FSYANQLGARQGAGAVYLHA Sbjct 203 KRGGGVALLLSNIREHGAPIKHIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHA 262 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+ MYLFSPYDVERVYGVP Sbjct 263 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEPMYLFSPYDVERVYGVP 322 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FAD++VTEKYYEMVD+A IRKTKI AREFFQTLAELQFESGYPY+MFEDTVNRANPI GK Sbjct 323 FADVNVTEKYYEMVDNAAIRKTKISAREFFQTLAELQFESGYPYVMFEDTVNRANPIKGK 382 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS FNEDLSYA+VG+DISCNLGS+NIA +MDSPDF +++E AIRA Sbjct 383 ITHSNLCSEILQVSTPSTFNEDLSYAEVGRDISCNLGSMNIALSMDSPDFGKSVETAIRA 442 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQT I+SVPS++ N HAIGLGQMNLHGYLARERIFYGSDEG+DFTNIYFYTV Sbjct 443 LTAVSDQTDIESVPSVKLANRGGHAIGLGQMNLHGYLARERIFYGSDEGLDFTNIYFYTV 502 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 YHA+RASN +A ER F GFE SKYA+GE+F KY ++ W P+T++VR LFA+AG+ IP Sbjct 503 AYHAIRASNLLAQERKQAFYGFEDSKYATGEYFQKYVEKEWAPRTERVRVLFAEAGVHIP 562 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR L VQ HG+YNQNLQAVPPTGSISYINHSTSSIHPI SK+EIRKEGKIGRVY Sbjct 563 TQDDWRELAALVQEHGLYNQNLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVY 622 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAP+MTNDNLEYY+DAYEIGYEK+IDTYA ATQHVDQGLSLTLFFKDTATTRD+NKAQI Sbjct 623 YPAPFMTNDNLEYYQDAYEIGYEKVIDTYAEATQHVDQGLSLTLFFKDTATTRDLNKAQI 682 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAW+KGIKT+YYIRLRQ+ALEGTEVEGCVSCML Sbjct 683 YAWKKGIKTIYYIRLRQLALEGTEVEGCVSCML 715 >gi|336322019|ref|YP_004601987.1| ribonucleoside-diphosphate reductase subunit alpha [Cellvibrio gilvus ATCC 13127] gi|336105600|gb|AEI13419.1| ribonucleoside-diphosphate reductase, alpha subunit [Cellvibrio gilvus ATCC 13127] Length=715 Score = 1234 bits (3193), Expect = 0.0, Method: Compositional matrix adjust. Identities = 585/693 (85%), Positives = 629/693 (91%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY ADGKIQFDKDREAA YFLQHVNQNTVFFH+ +EKLDYL+ YY+ VL QY Sbjct 23 MLNLYGADGKIQFDKDREAARAYFLQHVNQNTVFFHDLEEKLDYLVENKYYDPAVLAQYD 82 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R F+KTL AY+KKFRF TFLGAFKYYTSYTLKTFDGKRYLERFEDRV MVAL LA GD Sbjct 83 RAFIKTLFQYAYSKKFRFQTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALALAEGD 142 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 A LVDEI+ GRFQPATPTFLN GK QRGEPVSCFLLR+EDNMESI R INSALQLS Sbjct 143 QDYAISLVDEIVSGRFQPATPTFLNLGKAQRGEPVSCFLLRIEDNMESIARGINSALQLS 202 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+N+REHGAPIK+IENQSSGVIP+MKLLED+FSYANQLGARQGAGAVYLHA Sbjct 203 KRGGGVALLLSNVREHGAPIKHIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHA 262 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+ MYLFSPYDVERVYG P Sbjct 263 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEPMYLFSPYDVERVYGKP 322 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 FADI VTEKYYEMVDDARIRKTKI AREFFQTLAE+QFESGYPY+MFEDTVNRANPI+GK Sbjct 323 FADIDVTEKYYEMVDDARIRKTKISAREFFQTLAEIQFESGYPYVMFEDTVNRANPIEGK 382 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 ITHSNLCSEILQVSTPS FNEDLSY VG+DISCNLGS+NIA MDSPDF +++E AIRA Sbjct 383 ITHSNLCSEILQVSTPSTFNEDLSYDHVGRDISCNLGSMNIALAMDSPDFGKSVETAIRA 442 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQT I+SVPSI++ N HAIGLGQMNLHGYLARERIFYGSDEG+DFTNIYFYTV Sbjct 443 LTAVSDQTDIESVPSIKRANRGGHAIGLGQMNLHGYLARERIFYGSDEGLDFTNIYFYTV 502 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 YHA+RASN +A ERGT F GFE+SKYASGE+F+KY ++ W P+T++VR LFA AGI IP Sbjct 503 AYHAIRASNLLAQERGTAFYGFEKSKYASGEYFEKYVEREWAPRTERVRDLFAQAGIHIP 562 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR L V+ HGIYNQNLQAVPPTGSISYINHSTSSIHPI SK+EIRKEGKIGRVY Sbjct 563 TQDDWRELAALVKEHGIYNQNLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVY 622 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAP+MTNDNLEYY+DAYEIGYEKIIDTYA ATQHVDQGLSLTLFFKDTATTRD+NKAQI Sbjct 623 YPAPFMTNDNLEYYQDAYEIGYEKIIDTYAEATQHVDQGLSLTLFFKDTATTRDLNKAQI 682 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKT+YYIRLRQ+ALEGTEVE CVSCML Sbjct 683 YAWRKGIKTIYYIRLRQLALEGTEVENCVSCML 715 >gi|119960800|ref|YP_948076.1| ribonucleotide-diphosphate reductase subunit alpha [Arthrobacter aurescens TC1] gi|119947659|gb|ABM06570.1| Ribonucleoside-diphosphate reductase alpha chain [Arthrobacter aurescens TC1] Length=727 Score = 1234 bits (3192), Expect = 0.0, Method: Compositional matrix adjust. Identities = 581/693 (84%), Positives = 637/693 (92%), Gaps = 2/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY +G+IQF+ DREAAHQYFLQHVN NTVFFH+ +EKLDYL++ YYERE LDQY+ Sbjct 37 MLNLYGPNGEIQFEADREAAHQYFLQHVNNNTVFFHDLEEKLDYLVKNQYYERETLDQYT 96 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 NF++ L +RAY KKFRF TFLGAFK+YTSYTLKTFDGKR+LER+EDRV MVAL LA GD Sbjct 97 MNFIRDLFNRAYKKKFRFETFLGAFKFYTSYTLKTFDGKRFLERYEDRVCMVALHLARGD 156 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LVDEIIDGRFQPATPTFLN+GK QRGE VSCFLLR+EDNMESI R+INSALQLS Sbjct 157 EDLANRLVDEIIDGRFQPATPTFLNAGKAQRGELVSCFLLRIEDNMESIARAINSALQLS 216 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVAL LTNIREHGAPIK IENQSSGVIP+MKLLED+FSYANQLGARQGAGAVYLHA Sbjct 217 KRGGGVALSLTNIREHGAPIKQIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHA 276 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDI+RFLDTKRENADEKIRIKTLSLGVV+PDITFELAK+N+DMYLFSPYDVE+VYGVP Sbjct 277 HHPDIHRFLDTKRENADEKIRIKTLSLGVVVPDITFELAKKNEDMYLFSPYDVEKVYGVP 336 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 F+DISVTEKYYEMVDD+RI+KTKI AREFFQTLAE+QFESGYPYIMFEDTVNRANPIDGK Sbjct 337 FSDISVTEKYYEMVDDSRIKKTKISAREFFQTLAEIQFESGYPYIMFEDTVNRANPIDGK 396 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 IT SNLCSEILQVS+PS++ EDLSY VGKDISCNLGS+NIAKTMDSPDF +IE +IRA Sbjct 397 ITMSNLCSEILQVSSPSIYAEDLSYETVGKDISCNLGSMNIAKTMDSPDFGLSIETSIRA 456 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 L+AVSD ++I SVPSI QGN SHAIGLGQMNLHGYLARE + YGS+EG+DFTNIYFYTV Sbjct 457 LSAVSDMSYINSVPSIAQGNAQSHAIGLGQMNLHGYLAREHVHYGSEEGLDFTNIYFYTV 516 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 L+HALRASNR+AIE G F GFE+S YASGEFFDKYT+Q W P+T++VR+LF AG IP Sbjct 517 LFHALRASNRLAIETGQKFGGFEKSTYASGEFFDKYTEQEWVPETERVRELF--AGHHIP 574 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQDDWR LK SV HGIYNQNLQAVPPTGSISYIN+STSSIHP+ +K+EIRKEGKIGRVY Sbjct 575 TQDDWRELKASVMEHGIYNQNLQAVPPTGSISYINNSTSSIHPVAAKIEIRKEGKIGRVY 634 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+TNDNLEYY+DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRD+NKAQI Sbjct 635 YPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDINKAQI 694 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQ+ALEGTEVEGCVSCML Sbjct 695 YAWRKGIKTLYYIRLRQLALEGTEVEGCVSCML 727 >gi|229818598|ref|YP_002880124.1| ribonucleoside-diphosphate reductase subunit alpha [Beutenbergia cavernae DSM 12333] gi|229564511|gb|ACQ78362.1| ribonucleoside-diphosphate reductase, alpha subunit [Beutenbergia cavernae DSM 12333] Length=701 Score = 1232 bits (3187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 585/693 (85%), Positives = 630/693 (91%), Gaps = 0/693 (0%) Query 1 MLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYEREVLDQYS 60 MLNLY DG++Q DKDR AA +YFLQHVNQNTVFFHN EKLDYL+ YYE EVL +YS Sbjct 9 MLNLYGPDGRLQLDKDRSAAREYFLQHVNQNTVFFHNLKEKLDYLVEHGYYESEVLGKYS 68 Query 61 RNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLAAGD 120 R FV+ + D AYAKKFRF TFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLA GD Sbjct 69 REFVEHIFDVAYAKKFRFTTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVALTLADGD 128 Query 121 TALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSINSALQLS 180 LA LVDE+I GRFQPATPTFLN+GK QRGE VSCFLLR+EDNMESI R INSALQLS Sbjct 129 EQLALELVDEVISGRFQPATPTFLNAGKAQRGELVSCFLLRIEDNMESIARGINSALQLS 188 Query 181 KRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGAGAVYLHA 240 KRGGGVALLL+NIRE+GAPIK IENQSSGVIP+MKLLED+FSYANQLGARQGAGAVYLHA Sbjct 189 KRGGGVALLLSNIREYGAPIKKIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHA 248 Query 241 HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGVP 300 HHPDI RFLDTKRENADEKIRIKTLSLGVVIPDITFELAK+N+DMYLFSPYDVERVYGVP Sbjct 249 HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERVYGVP 308 Query 301 FADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNRANPIDGK 360 F++ISVTEKYYEM+DDARIRKTKIKAREFFQ LAE+QFESGYPYI+FEDTVNRANPI G+ Sbjct 309 FSEISVTEKYYEMLDDARIRKTKIKAREFFQLLAEIQFESGYPYIVFEDTVNRANPIKGR 368 Query 361 ITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRA 420 IT SNLCSEILQVST S FN+DLSYA GKDISCNLGSLNIA MDSPD +T+ VAIR+ Sbjct 369 ITMSNLCSEILQVSTASSFNDDLSYADTGKDISCNLGSLNIAHAMDSPDLGKTVGVAIRS 428 Query 421 LTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFTNIYFYTV 480 LTAVSDQTHI SVPS+E+GNNDSHAIGLGQMNLHGYLARERI YGS EG+DFTNIYFYTV Sbjct 429 LTAVSDQTHIWSVPSVEKGNNDSHAIGLGQMNLHGYLARERIHYGSAEGVDFTNIYFYTV 488 Query 481 LYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFADAGIRIP 540 LYHA+ ASN+IAIERG+ F GF S+YASGEFFDKYTD +WEP T +V QLFADA + IP Sbjct 489 LYHAIAASNQIAIERGSAFAGFSESQYASGEFFDKYTDGVWEPATDRVAQLFADAEVHIP 548 Query 541 TQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVY 600 TQ DW+ LK SV HGIYNQNLQAVPPTGSISYINHSTSSIHPIV+ +EIRKEGKIGRVY Sbjct 549 TQSDWQALKASVMEHGIYNQNLQAVPPTGSISYINHSTSSIHPIVAPIEIRKEGKIGRVY 608 Query 601 YPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQI 660 YPAPY+++DNLEYY DAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRD+NKAQI Sbjct 609 YPAPYLSDDNLEYYADAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDINKAQI 668 Query 661 YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 693 YAWRKGIKTLYYIRLRQ+ALEGTEVE CVSC+L Sbjct 669 YAWRKGIKTLYYIRLRQIALEGTEVENCVSCVL 701 Lambda K H 0.320 0.136 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1627691324532 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40