BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3060c Length=490 Score E Sequences producing significant alignments: (Bits) Value gi|15842628|ref|NP_337665.1| GntR family transcriptional regulat... 985 0.0 gi|15610197|ref|NP_217576.1| GntR family transcriptional regulat... 984 0.0 gi|340628052|ref|YP_004746504.1| putative transcriptional regula... 982 0.0 gi|296171141|ref|ZP_06852589.1| GntR family transcriptional regu... 696 0.0 gi|342860892|ref|ZP_08717541.1| GntR family transcriptional regu... 688 0.0 gi|254820770|ref|ZP_05225771.1| transcriptional regulator, GntR ... 683 0.0 gi|41409210|ref|NP_962046.1| hypothetical protein MAP3112c [Myco... 672 0.0 gi|308380563|ref|ZP_07669219.1| transcriptional regulator, gntR-... 671 0.0 gi|183981644|ref|YP_001849935.1| transcriptional regulatory prot... 648 0.0 gi|240171824|ref|ZP_04750483.1| transcriptional regulatory prote... 634 1e-179 gi|300788989|ref|YP_003769280.1| GntR family transcriptional reg... 457 2e-126 gi|269126815|ref|YP_003300185.1| GntR domain-containing protein ... 385 7e-105 gi|111026392|ref|YP_708675.1| GntR family transcriptional regula... 276 7e-72 gi|111026408|ref|YP_708691.1| GntR family transcriptional regula... 273 4e-71 gi|111219675|ref|YP_710469.1| GntR family transcriptional regula... 184 4e-44 gi|302526616|ref|ZP_07278958.1| predicted protein [Streptomyces ... 160 4e-37 gi|326383604|ref|ZP_08205290.1| GntR family transcriptional regu... 143 6e-32 gi|226366564|ref|YP_002784347.1| GntR family transcriptional reg... 116 7e-24 gi|342857739|ref|ZP_08714395.1| GntR family transcriptional regu... 115 2e-23 gi|158313524|ref|YP_001506032.1| GntR domain-containing protein ... 108 2e-21 gi|288918203|ref|ZP_06412558.1| GntR domain protein [Frankia sp.... 106 1e-20 gi|209515541|ref|ZP_03264406.1| GntR domain protein [Burkholderi... 102 2e-19 gi|345137933|dbj|BAK67542.1| putative GntR family transcriptiona... 99.0 2e-18 gi|331696567|ref|YP_004332806.1| GntR domain-containing protein ... 94.0 5e-17 gi|295689151|ref|YP_003592844.1| regulatory protein GntR HTH [Ca... 92.8 1e-16 gi|111026356|ref|YP_708639.1| GntR family transcriptional regula... 92.8 1e-16 gi|300785768|ref|YP_003766059.1| GntR family transcriptional reg... 91.7 2e-16 gi|72161693|ref|YP_289350.1| GntR family transcriptional regulat... 91.3 3e-16 gi|330807687|ref|YP_004352149.1| GntR family transcriptional reg... 89.0 2e-15 gi|297183571|gb|ADI19699.1| transcriptional regulators [uncultur... 86.7 8e-15 gi|297204628|ref|ZP_06922025.1| GntR regulatory protein [Strepto... 85.5 2e-14 gi|330468098|ref|YP_004405841.1| GntR family transcriptional reg... 85.1 2e-14 gi|111222543|ref|YP_713337.1| GntR family transcriptional regula... 85.1 3e-14 gi|302547337|ref|ZP_07299679.1| regulatory protein GntR, HTH [St... 85.1 3e-14 gi|154252229|ref|YP_001413053.1| GntR domain-containing protein ... 84.0 5e-14 gi|88854838|ref|ZP_01129504.1| putative transcription regulator ... 84.0 6e-14 gi|51245768|ref|YP_065652.1| transcriptional regulator [Desulfot... 82.8 1e-13 gi|343927863|ref|ZP_08767331.1| putative GntR family transcripti... 82.0 2e-13 gi|111222876|ref|YP_713670.1| GntR family transcriptional regula... 82.0 2e-13 gi|312199331|ref|YP_004019392.1| GntR family transcriptional reg... 81.6 3e-13 gi|84687298|ref|ZP_01015178.1| transcriptional regulator, GntR f... 80.9 4e-13 gi|158316326|ref|YP_001508834.1| regulatory protein GntR [Franki... 80.9 5e-13 gi|126436720|ref|YP_001072411.1| GntR family transcriptional reg... 80.5 6e-13 gi|85375817|ref|YP_459879.1| regulatory protein GntR, HTH [Eryth... 80.5 6e-13 gi|149186617|ref|ZP_01864929.1| regulatory protein GntR, HTH [Er... 80.5 7e-13 gi|333992397|ref|YP_004525011.1| FadR family transcriptional reg... 80.1 8e-13 gi|111222879|ref|YP_713673.1| GntR family transcriptional regula... 80.1 8e-13 gi|118467208|ref|YP_881752.1| GntR family transcriptional regula... 79.7 1e-12 gi|323528669|ref|YP_004230821.1| regulatory protein GntR HTH [Bu... 79.3 1e-12 gi|343926541|ref|ZP_08766045.1| putative GntR family transcripti... 79.3 1e-12 >gi|15842628|ref|NP_337665.1| GntR family transcriptional regulator [Mycobacterium tuberculosis CDC1551] gi|13882944|gb|AAK47479.1| transcriptional regulator, GntR family [Mycobacterium tuberculosis CDC1551] Length=510 Score = 985 bits (2546), Expect = 0.0, Method: Compositional matrix adjust. Identities = 490/490 (100%), Positives = 490/490 (100%), Gaps = 0/490 (0%) Query 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV Sbjct 21 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 80 Query 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA Sbjct 81 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 140 Query 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV Sbjct 141 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 200 Query 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND Sbjct 201 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 260 Query 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY Sbjct 261 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 320 Query 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 360 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC Sbjct 321 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 380 Query 361 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAG 420 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAG Sbjct 381 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAG 440 Query 421 NTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRR 480 NTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRR Sbjct 441 NTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRR 500 Query 481 HLDAAASWWL 490 HLDAAASWWL Sbjct 501 HLDAAASWWL 510 >gi|15610197|ref|NP_217576.1| GntR family transcriptional regulator [Mycobacterium tuberculosis H37Rv] gi|31794238|ref|NP_856731.1| GntR family transcriptional regulator [Mycobacterium bovis AF2122/97] gi|121638945|ref|YP_979169.1| GntR family transcriptional regulator [Mycobacterium bovis BCG str. Pasteur 1173P2] 74 more sequence titles Length=490 Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust. Identities = 490/490 (100%), Positives = 490/490 (100%), Gaps = 0/490 (0%) Query 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV Sbjct 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 Query 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA Sbjct 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 Query 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV Sbjct 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 Query 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND Sbjct 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 Query 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY Sbjct 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 Query 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 360 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC Sbjct 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 360 Query 361 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAG 420 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAG Sbjct 361 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAG 420 Query 421 NTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRR 480 NTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRR Sbjct 421 NTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRR 480 Query 481 HLDAAASWWL 490 HLDAAASWWL Sbjct 481 HLDAAASWWL 490 >gi|340628052|ref|YP_004746504.1| putative transcriptional regulatory protein [Mycobacterium canettii CIPT 140010059] gi|340006242|emb|CCC45416.1| putative transcriptional regulatory protein (probably GNTR-family) [Mycobacterium canettii CIPT 140010059] Length=490 Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust. Identities = 489/490 (99%), Positives = 490/490 (100%), Gaps = 0/490 (0%) Query 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV Sbjct 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 Query 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA Sbjct 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 Query 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV Sbjct 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 Query 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND Sbjct 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 Query 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY Sbjct 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 Query 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 360 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC Sbjct 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 360 Query 361 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAG 420 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAG Sbjct 361 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAG 420 Query 421 NTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRR 480 NT+LDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRR Sbjct 421 NTVLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRR 480 Query 481 HLDAAASWWL 490 HLDAAASWWL Sbjct 481 HLDAAASWWL 490 >gi|296171141|ref|ZP_06852589.1| GntR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894277|gb|EFG74032.1| GntR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=476 Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/490 (75%), Positives = 404/490 (83%), Gaps = 14/490 (2%) Query 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 MST P+ +K A+KIAR IEA+IVRRGW G SLGSE ALQ+RF VSRSVLREAVRLV Sbjct 1 MSTGPE----NKLAAKIARDIEAEIVRRGWATGESLGSEPALQERFGVSRSVLREAVRLV 56 Query 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 EHHQVARMRRGP GGL ICEP+AGPATRAVVIYLEYLGTT+GDLL ARLVLEPLAASLAA Sbjct 57 EHHQVARMRRGPGGGLIICEPDAGPATRAVVIYLEYLGTTLGDLLNARLVLEPLAASLAA 116 Query 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 E IDE GI LRAVLR EE WRPGLP P ++F+ LAEQSKNPVLQLFID+L+RLT RY Sbjct 117 ERIDEAGIASLRAVLRGEEEWRPGLPTPRDEFHIALAEQSKNPVLQLFIDVLIRLTARYA 176 Query 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 +S T +A EA+EA ++H +HS+IVAAVT+GDSA AKTLSERHVEAV WLQ H GN Sbjct 177 LQSRTDTATEAIEAVDRMHVDHSEIVAAVTSGDSARAKTLSERHVEAVTAWLQHHHPGNV 236 Query 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 R R+PR L + APRGKLAE+LAATIGDDIAA GWQVGSVFGTETALLERY Sbjct 237 T------RRRKPR---PLTVEAPRGKLAEMLAATIGDDIAAGGWQVGSVFGTETALLERY 287 Query 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 360 +VSRAV REAVRLLEYH+IAHMRRGPGGGLV+ PQ QASIDTIALYLQYR P REDLRC Sbjct 288 RVSRAVFREAVRLLEYHSIAHMRRGPGGGLVIAKPQAQASIDTIALYLQYRDPGREDLRC 347 Query 361 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAG 420 VRDAIEIDNVAKVVKRR E EVA FL T R + + DV AAVEEFRFHVGLAR AG Sbjct 348 VRDAIEIDNVAKVVKRRGEAEVADFLAT-HRSEVSDGPGDVADAAVEEFRFHVGLARLAG 406 Query 421 NTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRR 480 NT+LDLFL I+VELFRRH +ST Q PTW+DV+AV HAH+RI++AI +GD+SLAR R RR Sbjct 407 NTLLDLFLRIIVELFRRHWTSTGQEPPTWADVLAVDHAHLRIVDAIKAGDESLARYRVRR 466 Query 481 HLDAAASWWL 490 HLDAAASWWL Sbjct 467 HLDAAASWWL 476 >gi|342860892|ref|ZP_08717541.1| GntR family transcriptional regulator [Mycobacterium colombiense CECT 3035] gi|342131336|gb|EGT84606.1| GntR family transcriptional regulator [Mycobacterium colombiense CECT 3035] Length=485 Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/493 (74%), Positives = 397/493 (81%), Gaps = 11/493 (2%) Query 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 M+ EP DK AS +AR IEADIVRRGW +G SLGSE ALQQRF VSRSVLREAVRLV Sbjct 1 MTEEPRTGQADKLASILARDIEADIVRRGWAVGESLGSEQALQQRFGVSRSVLREAVRLV 60 Query 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 EHHQVARMRRGPNGGL+ICEP+AGPATRAVVIYLEYLGTT+GDLL ARLVLEPLAASLAA Sbjct 61 EHHQVARMRRGPNGGLYICEPDAGPATRAVVIYLEYLGTTLGDLLNARLVLEPLAASLAA 120 Query 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 E IDE GI RLRAVL E++W+PGLP P ++F+ LAEQSKNPVLQLFI++LMRLT RY Sbjct 121 ERIDEAGIARLRAVLEGEQQWKPGLPAPRDEFHMALAEQSKNPVLQLFINVLMRLTTRYA 180 Query 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 S T SA EA+EA +H HS IVAAVTAGDSA AKTLSERHVEAV WLQQH G+ Sbjct 181 LASRTDSATEAIEAVDHLHAHHSAIVAAVTAGDSARAKTLSERHVEAVTAWLQQHHAGDG 240 Query 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 R + APRGKLAE+LA TIGDDIAASGW+VGSVFGTE ALLERY Sbjct 241 RRGHQRRRRLDSE--------APRGKLAEMLAVTIGDDIAASGWRVGSVFGTEAALLERY 292 Query 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 360 +VSRAVLREAVRLLEYH+IA MRRGPGGGLV+ P QASIDTIALYLQYR PSREDLRC Sbjct 293 RVSRAVLREAVRLLEYHSIARMRRGPGGGLVIARPAAQASIDTIALYLQYRDPSREDLRC 352 Query 361 VRDAIEIDNVAKVVKRRSEPEVASFLDT--LGRPRLDNPT-DDVRAAAVEEFRFHVGLAR 417 VRDAIEIDN+AKVVKR EPEVASFL T G P+ PT DDVR A EEF FHVGLA+ Sbjct 353 VRDAIEIDNLAKVVKRLGEPEVASFLATHRSGLPQNSRPTADDVRRAIAEEFDFHVGLAQ 412 Query 418 AAGNTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCR 477 AGN +LDLFL I+VELFRRH SST QALPTWSDV+AV HAH+RI+EA+ D+S+A R Sbjct 413 LAGNALLDLFLRIIVELFRRHWSSTGQALPTWSDVLAVHHAHLRIVEAVEVADESVASYR 472 Query 478 TRRHLDAAASWWL 490 RRHLDAAASWWL Sbjct 473 LRRHLDAAASWWL 485 >gi|254820770|ref|ZP_05225771.1| transcriptional regulator, GntR family protein [Mycobacterium intracellulare ATCC 13950] Length=485 Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/493 (74%), Positives = 394/493 (80%), Gaps = 11/493 (2%) Query 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 MS + A DK AS +AR IEADIVRRGW +G SLGSE ALQQRF VSRSVLREAVRLV Sbjct 1 MSEDLKAGQADKLASILARDIEADIVRRGWAVGESLGSELALQQRFGVSRSVLREAVRLV 60 Query 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 EHHQVARMRRGPNGGL+ICEP+AGPATRAVVIYLEY+GTT+GDLL ARLVLEPLAASLAA Sbjct 61 EHHQVARMRRGPNGGLYICEPDAGPATRAVVIYLEYVGTTLGDLLNARLVLEPLAASLAA 120 Query 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 E IDE GI RLRAVL AEE+W+PGLP P ++F+ LAEQSKNPVLQLFID+LMRLT RY Sbjct 121 ERIDEAGIARLRAVLDAEEKWKPGLPAPRDEFHIALAEQSKNPVLQLFIDVLMRLTTRYA 180 Query 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 S T SA EA+EA +H HS IVAAVTAGDSA AKTLSERHVEAV GWLQ+H G+ Sbjct 181 LASRTDSATEAIEAVEHLHAHHSKIVAAVTAGDSARAKTLSERHVEAVTGWLQRHHPGDR 240 Query 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 R R + PRGKLAE+LA TIGDDIAASGW VGSVFGTE ALLERY Sbjct 241 VRGRTRRRRLDSE--------VPRGKLAEMLAVTIGDDIAASGWHVGSVFGTEAALLERY 292 Query 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 360 +VSRAV REAVRLLEYH+IAHMRRGPGGGLV+ P QASIDTIALYLQYR PSREDLRC Sbjct 293 RVSRAVFREAVRLLEYHSIAHMRRGPGGGLVIAEPAAQASIDTIALYLQYRDPSREDLRC 352 Query 361 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGR--PRLDNPT-DDVRAAAVEEFRFHVGLAR 417 VRDAIEIDNVAKV KR EP VA+FL P PT DDVR A EEF FHVGLA+ Sbjct 353 VRDAIEIDNVAKVAKRLDEPGVAAFLAAHRSQLPDAAQPTSDDVRRAIAEEFNFHVGLAQ 412 Query 418 AAGNTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCR 477 AGN +LDLFL I+VELFRRH SST QALPTWSDV+AV HAH+RI+EA+ + D+S+A R Sbjct 413 LAGNALLDLFLRIIVELFRRHWSSTGQALPTWSDVLAVHHAHLRIVEAVEAADESVACYR 472 Query 478 TRRHLDAAASWWL 490 RRHLDAAASWWL Sbjct 473 LRRHLDAAASWWL 485 >gi|41409210|ref|NP_962046.1| hypothetical protein MAP3112c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463771|ref|YP_883094.1| GntR family transcriptional regulator [Mycobacterium avium 104] gi|254776351|ref|ZP_05217867.1| transcriptional regulator, GntR family protein [Mycobacterium avium subsp. avium ATCC 25291] gi|41398030|gb|AAS05660.1| hypothetical protein MAP_3112c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165058|gb|ABK65955.1| transcriptional regulator, GntR family protein [Mycobacterium avium 104] gi|336459243|gb|EGO38188.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis S397] Length=485 Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/493 (73%), Positives = 396/493 (81%), Gaps = 11/493 (2%) Query 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 M+ EP AS +AR IEA+IVRRGW +G SLGSE ALQQRF VSRSVLREAVRLV Sbjct 1 MNAEPRTGPAKTLASALARDIEAEIVRRGWAVGESLGSEPALQQRFGVSRSVLREAVRLV 60 Query 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 EHHQVARMRRGPNGGL+ICEP+AGPATRAVVIYLEYLGTT+ DLL ARLVLEPLAASLAA Sbjct 61 EHHQVARMRRGPNGGLYICEPDAGPATRAVVIYLEYLGTTLADLLNARLVLEPLAASLAA 120 Query 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 E IDE GI RLRAVL AE++WRPGLP P ++F+ LAEQSKNPVLQLFI +LMRLT RY Sbjct 121 ERIDEAGIARLRAVLHAEQQWRPGLPMPRDEFHIALAEQSKNPVLQLFIKVLMRLTTRYA 180 Query 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 +S T S EA+EA +H HS IVAAVTAGD A AKTLSERHVEAV WLQ+H G+ Sbjct 181 LQSRTDSETEALEAVDHLHTHHSRIVAAVTAGDPARAKTLSERHVEAVTAWLQRHHAGD- 239 Query 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 RN R R PRR L P+GKLAE+LAATIGDDIAA GW+VGSVFGTETALL+RY Sbjct 240 ---RN--RGRTPRRP--LNSEVPQGKLAEMLAATIGDDIAADGWRVGSVFGTETALLQRY 292 Query 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 360 +VSRAV REAVRLLEYH+IAHMRRGPGGGLV+ P QASIDTIALYLQYR PSREDLRC Sbjct 293 RVSRAVFREAVRLLEYHSIAHMRRGPGGGLVIAEPAAQASIDTIALYLQYRDPSREDLRC 352 Query 361 VRDAIEIDNVAKVVKRRSEPEVASFLDT--LGRPRLDNPT-DDVRAAAVEEFRFHVGLAR 417 VRDAIEIDNVAKVVKR +EP+VA+F+ + G P T DDVR A EEF FHVGLA+ Sbjct 353 VRDAIEIDNVAKVVKRLAEPQVAAFVASRRSGLPDDSRQTPDDVRRAIAEEFDFHVGLAQ 412 Query 418 AAGNTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCR 477 AGN LDLFL I+VELFRRH SST QALPTWSDV AV HAH+RI +A+ +GD S+A R Sbjct 413 LAGNAPLDLFLRIIVELFRRHWSSTGQALPTWSDVRAVHHAHLRIADAVAAGDLSVASYR 472 Query 478 TRRHLDAAASWWL 490 RRHLDAAASWWL Sbjct 473 LRRHLDAAASWWL 485 >gi|308380563|ref|ZP_07669219.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis SUMu011] gi|308361077|gb|EFP49928.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis SUMu011] Length=428 Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/335 (100%), Positives = 335/335 (100%), Gaps = 0/335 (0%) Query 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV Sbjct 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 Query 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA Sbjct 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 Query 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV Sbjct 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 Query 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND Sbjct 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 Query 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY Sbjct 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 Query 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTP 335 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTP Sbjct 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTP 335 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 77/230 (34%), Positives = 118/230 (52%), Gaps = 17/230 (7%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 K A +A I DI GW +G+ G+E+AL +R+ VSR+VLREAVRL+E+H +A MRRG Sbjct 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASF 385 P GGL + P + + +YL+Y + DL R +E + + EP + Sbjct 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERL 131 Query 386 LDTL-----GRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHL- 439 L RP L P + +F+ LA + N +L LF+ IL+ L +R++ Sbjct 132 RAVLRAEERWRPGLPPPPE----------QFYRVLAEQSKNPVLQLFIDILMRLTKRYVQ 181 Query 440 -SSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAASW 488 S T+ A V + H I+ A+ +GD + A+ + RH++A A W Sbjct 182 KSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGW 231 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/76 (52%), Positives = 53/76 (70%), Gaps = 0/76 (0%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A +A I DI GW +G+ G+E+AL +R+ VSR+VLREAVRL+E+H +A MRRG Sbjct 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 Query 72 PNGGLFICEPNAGPAT 87 P GGL + P+ PA+ Sbjct 326 PGGGLVVTTPSHKPAS 341 >gi|183981644|ref|YP_001849935.1| transcriptional regulatory protein [Mycobacterium marinum M] gi|183174970|gb|ACC40080.1| transcriptional regulatory protein [Mycobacterium marinum M] Length=491 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/493 (73%), Positives = 402/493 (82%), Gaps = 8/493 (1%) Query 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 +S EPD + DKRA+++AR IEA+IVRRGW +GASLGSE ALQQR+ VSRSVLREAVRLV Sbjct 4 LSVEPDVIRADKRAARVARHIEAEIVRRGWTVGASLGSEGALQQRYGVSRSVLREAVRLV 63 Query 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 EHHQVARMRRGPNGGL IC P+AGPATRAVVIYLEYLG T+G+LL ARLV EPLAASLAA Sbjct 64 EHHQVARMRRGPNGGLLICAPDAGPATRAVVIYLEYLGITLGELLDARLVFEPLAASLAA 123 Query 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 EHIDE GI+RLRAVLRAEE+ +PGLP ++F+ LA QSKNPVLQLFI+ILMRLT+RY Sbjct 124 EHIDEAGIDRLRAVLRAEEQRKPGLPAVRDEFHVALARQSKNPVLQLFIEILMRLTRRYA 183 Query 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 S T + EA EA Q+HN+H+ I AAVTAGDSA AKTLSE+HV+ V GWLQQHQ G D Sbjct 184 LTSRTDTVAEAFEAVDQMHNDHAAIAAAVTAGDSARAKTLSEQHVQQVTGWLQQHQPGGD 243 Query 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 A + A PRR+ +L P GKLAEVLAATI DDIAASGWQ+ SVFGTETALL+RY Sbjct 244 AKL-----AHVPRRSLRLDSETPPGKLAEVLAATIADDIAASGWQLDSVFGTETALLQRY 298 Query 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 360 +VSRA LREAVRLLEYH++A MRRGPGGGLVVT PQ QASIDTIALYLQYR+PSREDLRC Sbjct 299 RVSRAALREAVRLLEYHSVARMRRGPGGGLVVTKPQSQASIDTIALYLQYRQPSREDLRC 358 Query 361 VRDAIEIDNVAKVVKRRSEPEVASFLDTL---GRPRLDNPTDDVRAAAVEEFRFHVGLAR 417 VRDAIEI NVAKVV++R+ PEVAS LD L ++ D R AVEEF FHVGLA+ Sbjct 359 VRDAIEIANVAKVVEQRARPEVASVLDELVVASDFAFEDAADAARKVAVEEFGFHVGLAQ 418 Query 418 AAGNTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCR 477 AGN +LDLFL I+VELF+RH SSTE PT++DV AV HAH RI EAI +GDDSLAR R Sbjct 419 LAGNALLDLFLRIIVELFQRHWSSTEHQQPTFNDVGAVEHAHQRIREAIIAGDDSLARYR 478 Query 478 TRRHLDAAASWWL 490 RRHLDAAASWWL Sbjct 479 IRRHLDAAASWWL 491 >gi|240171824|ref|ZP_04750483.1| transcriptional regulatory protein [Mycobacterium kansasii ATCC 12478] Length=486 Score = 634 bits (1635), Expect = 1e-179, Method: Compositional matrix adjust. Identities = 354/494 (72%), Positives = 403/494 (82%), Gaps = 12/494 (2%) Query 1 MSTEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 MS +P+A T KRA++IAR IEA+IVRRGWPIGASLGSE+ALQQR+ SRSVLREAVRLV Sbjct 1 MSVDPEAARTGKRAAQIARCIEAEIVRRGWPIGASLGSEAALQQRYGASRSVLREAVRLV 60 Query 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 EHHQVARMRRGPNGGL +C P+AGPATRAVVIYLEY GTT+ DLL ARLVLEPLAA+LAA Sbjct 61 EHHQVARMRRGPNGGLIVCAPDAGPATRAVVIYLEYRGTTLDDLLDARLVLEPLAAALAA 120 Query 121 EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV 180 E IDE GIERLRAVL AE++ RPGLP ++F+ LA+QSKNPVLQLFI++ MRLT+R+ Sbjct 121 EQIDEAGIERLRAVLSAEQQ-RPGLPAARDEFHVALAQQSKNPVLQLFIEVSMRLTRRFA 179 Query 181 QKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 S T SA EA+EA ++H++HS I AAVTAGDSA AK LSERHV+AV WLQQH+RG+ Sbjct 180 LSSRTDSATEALEALDRLHDDHSGIAAAVTAGDSARAKALSERHVQAVTAWLQQHRRGD- 238 Query 241 AAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERY 300 GRAR PR+ ++L APRGKLAEVLAA I DDIAASGWQV +VFGTE ALLERY Sbjct 239 ----RSGRAR-PRQVRRLDPEAPRGKLAEVLAAAIADDIAASGWQVDAVFGTEAALLERY 293 Query 301 QVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRC 360 +VSRAVLREAVRLLEYH IAHMRRGPGGGLVVT PQ QASIDTIALYLQYRKPSREDL Sbjct 294 RVSRAVLREAVRLLEYHTIAHMRRGPGGGLVVTRPQAQASIDTIALYLQYRKPSREDLGR 353 Query 361 VRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLD----NPTDDVRAAAVEEFRFHVGLA 416 V DAIEI NVAKVV+ R+EPEVA+ LDTL P +D ++R AA EEFRFH+GLA Sbjct 354 VGDAIEIANVAKVVQLRNEPEVAAMLDTLN-PSMDFAAGEAAGEMRKAAAEEFRFHIGLA 412 Query 417 RAAGNTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARC 476 + AGN +LDLFL I+ EL RRH SST P +DVVAV HAH+RIL+AI +GDDSLAR Sbjct 413 QLAGNALLDLFLRIIGELVRRHWSSTGGQPPAAADVVAVEHAHLRILQAIRAGDDSLARY 472 Query 477 RTRRHLDAAASWWL 490 R RRHLDAA +WWL Sbjct 473 RIRRHLDAATTWWL 486 >gi|300788989|ref|YP_003769280.1| GntR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|299798503|gb|ADJ48878.1| GntR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|340530621|gb|AEK45826.1| GntR family transcriptional regulator [Amycolatopsis mediterranei S699] Length=494 Score = 457 bits (1175), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 262/481 (55%), Positives = 317/481 (66%), Gaps = 19/481 (3%) Query 14 ASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPN 73 A++IA RIEAD+VRRGWP+G SLGSE L++ F VSRSVLREAVRLVEHHQVARMRRGPN Sbjct 27 AARIAHRIEADVVRRGWPVGESLGSELDLREHFGVSRSVLREAVRLVEHHQVARMRRGPN 86 Query 74 GGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRA 133 GGL +C P+AGPATR++VIYLEY+GT++ DLL ARL+LEP+AA LAA+ + E GIE LRA Sbjct 87 GGLLVCAPDAGPATRSMVIYLEYIGTSVTDLLQARLLLEPIAAGLAADQVTEEGIETLRA 146 Query 134 VLRAEERWRPGLPPPPEQ-FYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSAGEAV 192 L E L + + +L + S NPVL LFID+L RLT RY S E Sbjct 147 TLEDELAHGGELGIGTQDPLHPLLGKLSGNPVLHLFIDVLTRLTARYAHTSRRVPKAEVA 206 Query 193 EAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQH--QRGNDAAVRNGGRAR 250 + H H I AV AGD A A+T HVE VAGW+++H QR + G Sbjct 207 SSKELSHEAHRAIADAVIAGDGARAQTTLTAHVEWVAGWIEKHRVQR-----TKITGTVI 261 Query 251 EPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREA 310 EP + PR KLAEV+AA I DDIAA GWQVGS G+E LL RY +SRAVLREA Sbjct 262 EPEMVE-----GPRAKLAEVVAARIHDDIAARGWQVGSALGSEADLLARYGISRAVLREA 316 Query 311 VRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNV 370 VRLLEYH++A MRRGPGGGL+V P+PQASIDT+AL+L+Y+ + +DLR VRDAIE+ V Sbjct 317 VRLLEYHSVARMRRGPGGGLIVAAPEPQASIDTMALFLEYQCVTADDLRIVRDAIELGTV 376 Query 371 AKVVKRRS--EPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFL 428 A+V R + + EVA L R + P D R A + FH LA AGN +L LFL Sbjct 377 ARVTARHADGDAEVAERLAAAVRWPTEGPADAPRKADL----FHAELAELAGNPVLSLFL 432 Query 429 LILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAASW 488 I+ ELFRRH + ++ LP S V H H RIL+AI GD +AR R RRHLDA W Sbjct 433 SIITELFRRHAAGQDRPLPGDSAADEVQHVHQRILDAILVGDAGVARHRMRRHLDALIPW 492 Query 489 W 489 W Sbjct 493 W 493 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/223 (39%), Positives = 122/223 (55%), Gaps = 5/223 (2%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A +A RI DI RGW +G++LGSE+ L R+ +SR+VLREAVRL+E+H VARMRRG Sbjct 272 KLAEVVAARIHDDIAARGWQVGSALGSEADLLARYGISRAVLREAVRLLEYHSVARMRRG 331 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLE-PLAASLAAEHIDEPG--I 128 P GGL + P + + ++LEY T DL R +E A + A H D Sbjct 332 PGGGLIVAAPEPQASIDTMALFLEYQCVTADDLRIVRDAIELGTVARVTARHADGDAEVA 391 Query 129 ERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSA 188 ERL A +R P + F+ LAE + NPVL LF+ I+ L +R+ Sbjct 392 ERLAAAVRWPTEGPADAPRKADLFHAELAELAGNPVLSLFLSIITELFRRHAAGQDRPLP 451 Query 189 GEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGW 231 G++ AA +V + H I+ A+ GD+ A+ RH++A+ W Sbjct 452 GDS--AADEVQHVHQRILDAILVGDAGVARHRMRRHLDALIPW 492 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 76/232 (33%), Positives = 116/232 (50%), Gaps = 10/232 (4%) Query 261 GAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIA 320 GA G LA +A I D+ GW VG G+E L E + VSR+VLREAVRL+E+H +A Sbjct 20 GAKVGTLAARIAHRIEADVVRRGWPVGESLGSELDLREHFGVSRSVLREAVRLVEHHQVA 79 Query 321 HMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEP 380 MRRGP GGL+V P + ++ +YL+Y S DL R +E + +E Sbjct 80 RMRRGPNGGLLVCAPDAGPATRSMVIYLEYIGTSVTDLLQARLLLEPIAAGLAADQVTEE 139 Query 381 EVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLS 440 + + TL D + H L + +GN +L LF+ +L L R+ + Sbjct 140 GIETLRATLE----DELAHGGELGIGTQDPLHPLLGKLSGNPVLHLFIDVLTRLTARY-A 194 Query 441 STEQALPTWSDVVA---VGH-AHVRILEAIGSGDDSLARCRTRRHLDAAASW 488 T + +P ++V + + H AH I +A+ +GD + A+ H++ A W Sbjct 195 HTSRRVPK-AEVASSKELSHEAHRAIADAVIAGDGARAQTTLTAHVEWVAGW 245 >gi|269126815|ref|YP_003300185.1| GntR domain-containing protein [Thermomonospora curvata DSM 43183] gi|268311773|gb|ACY98147.1| GntR domain protein [Thermomonospora curvata DSM 43183] Length=501 Score = 385 bits (990), Expect = 7e-105, Method: Compositional matrix adjust. Identities = 246/493 (50%), Positives = 310/493 (63%), Gaps = 26/493 (5%) Query 4 EPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHH 63 PD K A++IARRIE DI+R GWP+G +LGSE+ L++R+ VSRSVLREAVRLVEHH Sbjct 27 HPDGAPAGKLAAQIARRIEDDIIRLGWPVGRNLGSEAELRERYQVSRSVLREAVRLVEHH 86 Query 64 QVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHI 123 +VARMRRGP GGL + P+AGPA A+VIYL+Y+GT++ DL+ ARL+LEP AA+LAAE + Sbjct 87 RVARMRRGPGGGLLVTAPDAGPAGHAMVIYLDYVGTSVDDLMDARLLLEPPAAALAAERL 146 Query 124 DEPGIERLRAVLRAEER-------WRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLT 176 E GIERLR VLR EE W P ++ + +L E S NP L LFID+L RLT Sbjct 147 TEDGIERLRRVLREEEERPEEPGAW------PRDRLHTLLGELSGNPALHLFIDVLTRLT 200 Query 177 KRYVQKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQ 236 RY S S EA A +EH+ +V AV +GD+ A+ H+ +A WL +H Sbjct 201 ARYAHHSRRISNAEAARAKAGSRHEHARLVDAVVSGDAGLAQAHLTEHLHQIADWLHRH- 259 Query 237 RGNDAAVRNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETAL 296 R + A R P G P KLAEV+AA I D IAA+GW VG V G+ET L Sbjct 260 RAPEGAPAVPAEPRPP--------GGPGAKLAEVIAARIHDQIAAAGWPVGQVLGSETDL 311 Query 297 LERYQVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSRE 356 L RY +SRAVLREAVRLLE+H +A MRRGPGGGLVVT P+P A IDT+ALYL Y+ + E Sbjct 312 LVRYGISRAVLREAVRLLEHHRVARMRRGPGGGLVVTVPEPDAGIDTMALYLDYQGVTGE 371 Query 357 DLRCVRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLA 416 DLR VRDAIE+ + +V R +P+VA L L+ + + FH LA Sbjct 372 DLRVVRDAIELGTLRRVTARHRDPQVAERLHAA----LERTAEWLGPGRAGADLFHTELA 427 Query 417 RAAGNTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARC 476 +GN +L +FL L EL+ RH ++ EQ P V H RILEAI GD S+A+ Sbjct 428 ELSGNPVLVMFLRTLTELWARHTAAQEQPPPGLEAAAEVERVHRRILEAILDGDQSMAQY 487 Query 477 RTRRHLDAAASWW 489 R RRHL A +W+ Sbjct 488 RMRRHLKALTAWY 500 >gi|111026392|ref|YP_708675.1| GntR family transcriptional regulator [Rhodococcus jostii RHA1] gi|110825235|gb|ABH00517.1| possible transcriptional regulator, GntR family [Rhodococcus jostii RHA1] Length=477 Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 184/463 (40%), Positives = 251/463 (55%), Gaps = 28/463 (6%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A+ +A+R+EADI GW +G SE L R+ VSR LREA+RL+EH V R RR Sbjct 26 KLAAVLAQRLEADIAAAGWRVGEVFASEENLCSRYDVSRGALREAIRLLEHRGVVRTRRS 85 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERL 131 GGL + P+A P RA+ +YLE++G + DLL AR++LEP AA LA+E + E GI L Sbjct 86 SPGGLVVQAPDAHPLARAMAVYLEFVGANVADLLRARVLLEPAAARLASERLTEDGINHL 145 Query 132 RAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSAGEA 191 RA LR E+ E+ + VLA+ + VL LF+D+L++LT Y Q + Sbjct 146 RASLRREQEAEGFDSTGHERLHIVLADHCGSAVLTLFVDVLVQLTINYAQVPTLPIDRKL 205 Query 192 VEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGNDAAVRNGGRARE 251 + + + H IV A+ +GD A+ S RH+ AV WL Q+ + G + Sbjct 206 QDLKSESDHAHKAIVDAIVSGDHVLAQHRSVRHLRAVNAWLLSVQQ---RPIDRGSSSPA 262 Query 252 PRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAV 311 P P KLAE +A + DI SG Q G +FG+E+ L R VSRAV REAV Sbjct 263 PL--------PPTAKLAETVAHRLMTDIVTSGMQAGQIFGSESELQARSGVSRAVFREAV 314 Query 312 RLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVA 371 RLLE+H IA MRRGP GGLV+T P P ASI+ YL+YR S +++R VRD +E+ +A Sbjct 315 RLLEHHHIARMRRGPYGGLVITEPDPAASIEAAGTYLRYRGTSTDEVRQVRDILELGALA 374 Query 372 KVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLIL 431 V +R EPE+ L+ T D RA V AR A + +L+LF IL Sbjct 375 AVTERLHEPEMHERLEAAAE-FCGGATADERA---------VIFARLADDPILELFTHIL 424 Query 432 VELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLA 474 + + A+P D AH +L A+ +GD +LA Sbjct 425 LA------AEGLDAVPVADDRDG-QDAHASVLSALLNGDSALA 460 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 85/237 (36%), Positives = 119/237 (51%), Gaps = 17/237 (7%) Query 261 GAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIA 320 G + KLA VLA + DIAA+GW+VG VF +E L RY VSR LREA+RLLE+ + Sbjct 21 GERKRKLAAVLAQRLEADIAAAGWRVGEVFASEENLCSRYDVSRGALREAIRLLEHRGVV 80 Query 321 HMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEP 380 RR GGLVV P +A+YL++ + DL R +E +R +E Sbjct 81 RTRRSSPGGLVVQAPDAHPLARAMAVYLEFVGANVADLLRARVLLEPAAARLASERLTED 140 Query 381 EVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRH-- 438 + +L R + D + R H+ LA G+ +L LF+ +LV+L + Sbjct 141 GINHLRASLRREQEAEGFD-----STGHERLHIVLADHCGSAVLTLFVDVLVQLTINYAQ 195 Query 439 -----LSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAASWWL 490 + Q L + SD HAH I++AI SGD LA+ R+ RHL A +W L Sbjct 196 VPTLPIDRKLQDLKSESD-----HAHKAIVDAIVSGDHVLAQHRSVRHLRAVNAWLL 247 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 81/215 (38%), Positives = 110/215 (52%), Gaps = 28/215 (13%) Query 10 TDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMR 69 T K A +A R+ DIV G G GSES LQ R VSR+V REAVRL+EHH +ARMR Sbjct 267 TAKLAETVAHRLMTDIVTSGMQAGQIFGSESELQARSGVSRAVFREAVRLLEHHHIARMR 326 Query 70 RGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGI- 128 RGP GGL I EP+ + A YL Y GT+ ++ R +LE A + E + EP + Sbjct 327 RGPYGGLVITEPDPAASIEAAGTYLRYRGTSTDEVRQVRDILELGALAAVTERLHEPEMH 386 Query 129 ERLRAVLR------AEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQK 182 ERL A A+ER + A + +P+L+LF IL+ Sbjct 387 ERLEAAAEFCGGATADERA------------VIFARLADDPILELFTHILL-------AA 427 Query 183 SGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWA 217 G + A + GQ + H+ +++A+ GDSA A Sbjct 428 EGLDAVPVADDRDGQ--DAHASVLSALLNGDSALA 460 >gi|111026408|ref|YP_708691.1| GntR family transcriptional regulator [Rhodococcus jostii RHA1] gi|110825251|gb|ABH00533.1| probable transcriptional regulator, GntR family [Rhodococcus jostii RHA1] Length=472 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 165/421 (40%), Positives = 232/421 (56%), Gaps = 21/421 (4%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A +A+R+EADI R GWP+G SE L+ R+ VSR+ LREA+RL+EH R RR Sbjct 24 KLAKVLAQRLEADIARAGWPVGEIFASEDGLRSRYGVSRAALREAIRLLEHRGFVRTRRS 83 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERL 131 GGL + P+A P +RA+ +YLE++G T+ DLL AR++LEP+AA +A++H+ E GI+ L Sbjct 84 APGGLVVQAPDARPVSRAMAVYLEFVGATVDDLLRARVLLEPVAARVASQHLTEDGIDYL 143 Query 132 RAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSAGEA 191 R L E+ P E+ + VL N L LF+D+L+ LT Y + + + Sbjct 144 RGCLTREQANEGFEPTGRERLHVVLGNLCGNTALTLFVDVLVELTTSYARVPTLPADPKL 203 Query 192 VEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGNDAAVRNGGRARE 251 E + + H IV AV +G+ A + RH+ AV WL + + G A Sbjct 204 QELKSESDHAHGAIVDAVVSGNHILAHHRTVRHLRAVHAWLMS---AKQSPIDRGSSASA 260 Query 252 PRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAV 311 P P KLAE +A + +IAASG G +FG+E L R VSRAV REAV Sbjct 261 PL--------PPTAKLAETVADRLMTEIAASGIGAGEIFGSERELQARSDVSRAVFREAV 312 Query 312 RLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVA 371 RLLE+H +A MRRGP GGLV+T P P AS++ YL+Y+ S DL+ VR+ IE+ ++ Sbjct 313 RLLEHHHVARMRRGPHGGLVITDPNPAASVEAAVTYLRYQGASAHDLQHVREVIELGALS 372 Query 372 KVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLIL 431 V R EP++ L+ + +DD+ V R A N +L LF IL Sbjct 373 TVAARLHEPKLRGLLEVASDSFSETVSDDLPTLFV----------RLADNPILLLFTQIL 422 Query 432 V 432 + Sbjct 423 L 423 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 84/233 (37%), Positives = 116/233 (50%), Gaps = 13/233 (5%) Query 263 PRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHM 322 P KLA+VLA + DIA +GW VG +F +E L RY VSRA LREA+RLLE+ Sbjct 21 PEVKLAKVLAQRLEADIARAGWPVGEIFASEDGLRSRYGVSRAALREAIRLLEHRGFVRT 80 Query 323 RRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEV 382 RR GGLVV P + +A+YL++ + +DL R +E + +E + Sbjct 81 RRSAPGGLVVQAPDARPVSRAMAVYLEFVGATVDDLLRARVLLEPVAARVASQHLTEDGI 140 Query 383 ASFLDTLGRPRLD---NPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHL 439 L R + + PT R HV L GNT L LF+ +LVEL + Sbjct 141 DYLRGCLTREQANEGFEPTG--------RERLHVVLGNLCGNTALTLFVDVLVELTTSYA 192 Query 440 S-STEQALPTWSDVVA-VGHAHVRILEAIGSGDDSLARCRTRRHLDAAASWWL 490 T A P ++ + HAH I++A+ SG+ LA RT RHL A +W + Sbjct 193 RVPTLPADPKLQELKSESDHAHGAIVDAVVSGNHILAHHRTVRHLRAVHAWLM 245 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 71/166 (43%), Positives = 91/166 (55%), Gaps = 9/166 (5%) Query 10 TDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMR 69 T K A +A R+ +I G G GSE LQ R VSR+V REAVRL+EHH VARMR Sbjct 265 TAKLAETVADRLMTEIAASGIGAGEIFGSERELQARSDVSRAVFREAVRLLEHHHVARMR 324 Query 70 RGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIE 129 RGP+GGL I +PN + A V YL Y G + DL R V+E A S A + EP Sbjct 325 RGPHGGLVITDPNPAASVEAAVTYLRYQGASAHDLQHVREVIELGALSTVAARLHEP--- 381 Query 130 RLRAVLR-AEERWRPGLPPP-PEQFYRVLAEQSKNPVLQLFIDILM 173 +LR +L A + + + P F R+ + NP+L LF IL+ Sbjct 382 KLRGLLEVASDSFSETVSDDLPTLFVRL----ADNPILLLFTQILL 423 >gi|111219675|ref|YP_710469.1| GntR family transcriptional regulator [Frankia alni ACN14a] gi|111147207|emb|CAJ58856.1| Putative transcriptional regulator (GntR-family) [Frankia alni ACN14a] Length=567 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 104/226 (47%), Positives = 141/226 (63%), Gaps = 5/226 (2%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A+++A RIE DIVR GWP+G +GSE L +R+ VSR+V REAVR+VEHHQVA MRRG Sbjct 22 KLAAQVAWRIEDDIVRAGWPVGTVIGSEPTLIERYKVSRAVFREAVRIVEHHQVATMRRG 81 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERL 131 P+GGL + P+ T A+ +YLEY+G TI +L AR ++E LAASLA I E GI L Sbjct 82 PSGGLIVRAPDEVAVTTALGVYLEYVGVTIESILRARFIIESLAASLAPARITEDGIRTL 141 Query 132 RAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYV--QKSGTQSAG 189 R ++ E P Q + +A + NPVL LF+D+L LT RY Q + T+S+ Sbjct 142 REIIARRETADPTEFGSHHQLHHAIAAATGNPVLVLFVDVLNSLTFRYAAHQYATTRSSA 201 Query 190 EA---VEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWL 232 + A +VH H+ I AV GD+A A+ L+ H+EA+ W+ Sbjct 202 SPARRAQVAEEVHRNHAAIAEAVIGGDAARAQHLAAVHLEAMYEWM 247 Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 105/233 (46%), Positives = 140/233 (61%), Gaps = 14/233 (6%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 KLAE +A I DD+A G VG V G+E+ LL RY VSRAVLREAVRLLEYH++A MRRG Sbjct 337 KLAETVAGRIRDDVARDGIPVGVVIGSESDLLARYGVSRAVLREAVRLLEYHSVAQMRRG 396 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASF 385 PGGGLVVT P P A+++ ALYL+Y + S +DLR VRDA+E+ V +++RR PE+ + Sbjct 397 PGGGLVVTEPDPAATVEATALYLEYSQASVDDLRIVRDALELSCVDVLIERRG-PELTAR 455 Query 386 LDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSSTEQA 445 L+ L + + + A H+ LAR GN L F+ +L ++RRH+ + A Sbjct 456 LEEL---LVADACEVPGGPADAGHHLHMELARLTGNEALASFVRVLTAIWRRHVDGSRPA 512 Query 446 LPTWSDVVAVG----------HAHVRILEAIGSGDDSLARCRTRRHLDAAASW 488 A G AH I++AI +GD LAR R RRHL+A + W Sbjct 513 PAIGDGEAAAGGCGQAVREARTAHRAIIDAIIAGDRGLARHRMRRHLEAVSDW 565 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 88/232 (38%), Positives = 122/232 (53%), Gaps = 15/232 (6%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A +A RI D+ R G P+G +GSES L R+ VSR+VLREAVRL+E+H VA+MRRG Sbjct 337 KLAETVAGRIRDDVARDGIPVGVVIGSESDLLARYGVSRAVLREAVRLLEYHSVAQMRRG 396 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIE-- 129 P GGL + EP+ A +YLEY ++ DL R+V + L S I+ G E Sbjct 397 PGGGLVVTEPDPAATVEATALYLEYSQASVDDL---RIVRDALELSCVDVLIERRGPELT 453 Query 130 -RLRAVLRAEERWRPGLPPPP-EQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKS---- 183 RL +L A+ PG P + LA + N L F+ +L + +R+V S Sbjct 454 ARLEELLVADACEVPGGPADAGHHLHMELARLTGNEALASFVRVLTAIWRRHVDGSRPAP 513 Query 184 ----GTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGW 231 G +AG +A + H I+ A+ AGD A+ RH+EAV+ W Sbjct 514 AIGDGEAAAGGCGQAVREARTAHRAIIDAIIAGDRGLARHRMRRHLEAVSDW 565 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 86/235 (37%), Positives = 123/235 (53%), Gaps = 12/235 (5%) Query 261 GAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIA 320 G RGKLA +A I DDI +GW VG+V G+E L+ERY+VSRAV REAVR++E+H +A Sbjct 17 GDARGKLAAQVAWRIEDDIVRAGWPVGTVIGSEPTLIERYKVSRAVFREAVRIVEHHQVA 76 Query 321 HMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEP 380 MRRGP GGL+V P A + +YL+Y + E + R IE + R +E Sbjct 77 TMRRGPSGGLIVRAPDEVAVTTALGVYLEYVGVTIESILRARFIIESLAASLAPARITED 136 Query 381 EVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVEL-FR--- 436 + + + + R +PT+ + H +A A GN +L LF+ +L L FR Sbjct 137 GIRTLREIIARRETADPTE-----FGSHHQLHHAIAAATGNPVLVLFVDVLNSLTFRYAA 191 Query 437 -RHLSSTEQALPTWSDVVA--VGHAHVRILEAIGSGDDSLARCRTRRHLDAAASW 488 ++ ++ A P VA V H I EA+ GD + A+ HL+A W Sbjct 192 HQYATTRSSASPARRAQVAEEVHRNHAAIAEAVIGGDAARAQHLAAVHLEAMYEW 246 >gi|302526616|ref|ZP_07278958.1| predicted protein [Streptomyces sp. AA4] gi|302435511|gb|EFL07327.1| predicted protein [Streptomyces sp. AA4] Length=246 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 93/228 (41%), Positives = 135/228 (60%), Gaps = 4/228 (1%) Query 10 TDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMR 69 T + A K++ +IE DI+ GW +G+ LGSE+ L +R+ VSR+V REAVRLVEH Q+A MR Sbjct 16 TRRLAEKVSEQIEKDIIDAGWRVGSVLGSETELIERYGVSRAVFREAVRLVEHQQMAAMR 75 Query 70 RGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIE 129 RGP GGL + EP+ G A +YL + + L+ AR LE +LAAE++ E GI Sbjct 76 RGPGGGLVVTEPDPGVVRNAARVYLRHAEVSRQQLMEARTALEVAGIALAAENLTESGIV 135 Query 130 RLRAVLRAEERW--RPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQK--SGT 185 RL+ L +E R +RV+AE + NP + LF+++L +L + VQ+ Sbjct 136 RLKEALESERELIERGFTRGHARNLHRVIAELAGNPAITLFVEVLAQLDQDIVQREWDAE 195 Query 186 QSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQ 233 S GE +AA + H H IVAA+ AGD+ + RH++A+A L+ Sbjct 196 DSGGEHRDAARESHEAHEAIVAALVAGDAPLGQHRMRRHLQAIAALLR 243 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 86/226 (39%), Positives = 122/226 (54%), Gaps = 7/226 (3%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 +LAE ++ I DI +GW+VGSV G+ET L+ERY VSRAV REAVRL+E+ +A MRRG Sbjct 18 RLAEKVSEQIEKDIIDAGWRVGSVLGSETELIERYGVSRAVFREAVRLVEHQQMAAMRRG 77 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASF 385 PGGGLVVT P P + +YL++ + SR+ L R A+E+ +A + +E + Sbjct 78 PGGGLVVTEPDPGVVRNAARVYLRHAEVSRQQLMEARTALEVAGIALAAENLTESGIVRL 137 Query 386 LDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLS---ST 442 + L R R A H +A AGN + LF+ +L +L + + Sbjct 138 KEALESERELIERGFTRGHA---RNLHRVIAELAGNPAITLFVEVLAQLDQDIVQREWDA 194 Query 443 EQALPTWSDVVAVGH-AHVRILEAIGSGDDSLARCRTRRHLDAAAS 487 E + D H AH I+ A+ +GD L + R RRHL A A+ Sbjct 195 EDSGGEHRDAARESHEAHEAIVAALVAGDAPLGQHRMRRHLQAIAA 240 >gi|326383604|ref|ZP_08205290.1| GntR family transcriptional regulator [Gordonia neofelifaecis NRRL B-59395] gi|326197688|gb|EGD54876.1| GntR family transcriptional regulator [Gordonia neofelifaecis NRRL B-59395] Length=231 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 92/230 (40%), Positives = 126/230 (55%), Gaps = 4/230 (1%) Query 14 ASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPN 73 A +A RIE DI+ +GW G+ LGSE+ L +R+ VSR+V REAVRLVEHHQ+ARMRRGP Sbjct 2 AETVADRIEQDILAQGWDTGSILGSEAQLIERYGVSRAVFREAVRLVEHHQMARMRRGPG 61 Query 74 GGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRA 133 GGL + EP+ G +A +YL T L AR LE A E + E GI +L Sbjct 62 GGLVVTEPDPGAVRQAARVYLRRADVTRQQLFDARAALELAGVVTATEQLTEDGIAQLTE 121 Query 134 VLRAE-ERWRPGLPPP-PEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKS--GTQSAG 189 LR E E G+ + V+A+ + NP + LFI++L +L + VQ+ Sbjct 122 ALRVEAELVEQGVTTGHARNVHSVIADMTGNPAISLFIEVLAQLDEDMVQQGWISRDDPT 181 Query 190 EAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGN 239 + A H H IVAA+ AGD+ A+ RH++A+A L R + Sbjct 182 DRAALAEASHAAHEAIVAAIVAGDAPLAQHRMRRHLQAIADLLTDDVRAD 231 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 84/225 (38%), Positives = 117/225 (52%), Gaps = 7/225 (3%) Query 267 LAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGP 326 +AE +A I DI A GW GS+ G+E L+ERY VSRAV REAVRL+E+H +A MRRGP Sbjct 1 MAETVADRIEQDILAQGWDTGSILGSEAQLIERYGVSRAVFREAVRLVEHHQMARMRRGP 60 Query 327 GGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASFL 386 GGGLVVT P P A +YL+ +R+ L R A+E+ V ++ +E +A Sbjct 61 GGGLVVTEPDPGAVRQAARVYLRRADVTRQQLFDARAALELAGVVTATEQLTEDGIAQLT 120 Query 387 DTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLS----ST 442 + L R++ + H +A GN + LF+ +L +L + S Sbjct 121 EAL---RVEAELVEQGVTTGHARNVHSVIADMTGNPAISLFIEVLAQLDEDMVQQGWISR 177 Query 443 EQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAAS 487 + + A AH I+ AI +GD LA+ R RRHL A A Sbjct 178 DDPTDRAALAEASHAAHEAIVAAIVAGDAPLAQHRMRRHLQAIAD 222 >gi|226366564|ref|YP_002784347.1| GntR family transcriptional regulator [Rhodococcus opacus B4] gi|226245054|dbj|BAH55402.1| putative GntR family transcriptional regulator [Rhodococcus opacus B4] Length=253 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 80/216 (38%), Positives = 121/216 (57%), Gaps = 24/216 (11%) Query 261 GAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIA 320 G PR + A+V A I D+I A+GW++G G+ET+L+ R+ V R+V+REA R+LE +A Sbjct 14 GPPRPRAADV-ARAIEDEIVAAGWRLGEALGSETSLMARFGVGRSVIREACRILESRHVA 72 Query 321 HMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEP 380 RRGPGGGLVVT P+ A +D +LYL+Y + DL + +E A+ Sbjct 73 KPRRGPGGGLVVTAPERSAVLDHASLYLEYAGFAAADLFETMETLETAAAAQ-------- 124 Query 381 EVASFLDTLGRPRL------DNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVEL 434 +++ +D G RL ++ +DD+RA AV H +AR GN +L+LF+ I L Sbjct 125 -LSATIDPAGVDRLRQVLAEESRSDDLRAQAVT---VHTEIARLTGNPVLELFMHIGNNL 180 Query 435 FRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGD 470 R H S +A W + +V +++AI +GD Sbjct 181 ARIHGVSPTEAERRW-----IHERNVELVDAIIAGD 211 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/207 (38%), Positives = 110/207 (54%), Gaps = 10/207 (4%) Query 13 RASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGP 72 RA+ +AR IE +IV GW +G +LGSE++L RF V RSV+REA R++E VA+ RRGP Sbjct 19 RAADVARAIEDEIVAAGWRLGEALGSETSLMARFGVGRSVIREACRILESRHVAKPRRGP 78 Query 73 NGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLR 132 GGL + P +YLEY G DL LE AA+ + ID G++RLR Sbjct 79 GGGLVVTAPERSAVLDHASLYLEYAGFAAADLFETMETLETAAAAQLSATIDPAGVDRLR 138 Query 133 AVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSAGEAV 192 VL AEE L + +A + NPVL+LF+ I L + + Sbjct 139 QVL-AEESRSDDLRAQAVTVHTEIARLTGNPVLELFMHIGNNLARIH--------GVSPT 189 Query 193 EAAGQ-VHNEHSDIVAAVTAGDSAWAK 218 EA + +H + ++V A+ AGD+ A+ Sbjct 190 EAERRWIHERNVELVDAIIAGDALAAQ 216 >gi|342857739|ref|ZP_08714395.1| GntR family transcriptional regulator [Mycobacterium colombiense CECT 3035] gi|342135072|gb|EGT88238.1| GntR family transcriptional regulator [Mycobacterium colombiense CECT 3035] Length=246 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 83/227 (37%), Positives = 114/227 (51%), Gaps = 5/227 (2%) Query 2 STEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVE 61 +T P V + +A+RIE I GW G +GSES L + F V + +REA R++E Sbjct 11 TTPPRPVAGQTLGAALAQRIEQRIRVEGWGPGRLIGSESDLCETFDVGTAAVREAARILE 70 Query 62 HHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAE 121 VA+ RRGP GGLF+ +P T A YL + G DL + LE LA S A Sbjct 71 ARGVAKARRGPGGGLFVTQPEQSLVTDAARRYLSHAGIDRADLFEVWMALEQLAISKLAA 130 Query 122 HIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQ 181 ID G +RLR +L E P + +A QS N L+LFI +L LT Sbjct 131 SIDPAGAKRLRDLLGKELLEAPRAWTELPNIHLEIARQSDNAALELFIRVLSELTLHTY- 189 Query 182 KSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAV 228 T+ G+A+E +H H ++V A+ AGD+A A+ R + AV Sbjct 190 -GATEEPGQAIE---WLHARHVELVDAIIAGDAALAQLHLRRFIAAV 232 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/219 (34%), Positives = 105/219 (48%), Gaps = 10/219 (4%) Query 267 LAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGP 326 L LA I I GW G + G+E+ L E + V A +REA R+LE +A RRGP Sbjct 22 LGAALAQRIEQRIRVEGWGPGRLIGSESDLCETFDVGTAAVREAARILEARGVAKARRGP 81 Query 327 GGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASFL 386 GGGL VT P+ D YL + R DL V A+E ++K+ Sbjct 82 GGGLFVTQPEQSLVTDAARRYLSHAGIDRADLFEVWMALEQLAISKLAASIDPAGAKRLR 141 Query 387 DTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSSTEQAL 446 D LG+ L+ P A E H+ +AR + N L+LF+ +L EL +TE+ Sbjct 142 DLLGKELLEAPR-----AWTELPNIHLEIARQSDNAALELFIRVLSELTLHTYGATEEP- 195 Query 447 PTWSDVVAVGHA-HVRILEAIGSGDDSLARCRTRRHLDA 484 + HA HV +++AI +GD +LA+ RR + A Sbjct 196 ---GQAIEWLHARHVELVDAIIAGDAALAQLHLRRFIAA 231 >gi|158313524|ref|YP_001506032.1| GntR domain-containing protein [Frankia sp. EAN1pec] gi|158108929|gb|ABW11126.1| GntR domain protein [Frankia sp. EAN1pec] Length=312 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 86/240 (36%), Positives = 115/240 (48%), Gaps = 37/240 (15%) Query 14 ASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPN 73 AS++AR IE +I+RRGWP+G LGSE+ L +R+ V RSVLREAVRL+E VAR R GP Sbjct 76 ASRLARTIELEIIRRGWPVGEGLGSEAQLMERYQVGRSVLREAVRLLESRWVARPRPGPG 135 Query 74 GGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRA 133 GGL + P+ +YL++ L LE +A AE ID G+ RLR Sbjct 136 GGLVVTAPDHDGVRDVARVYLDFARARPEHLCETWSALEAVAVRRLAERIDTAGLTRLRG 195 Query 134 VL------------RAEERWRPGLPPP---------PEQFYRVLAEQSKNPVLQLFIDIL 172 L R+ R P P P + +A + NP +LFI +L Sbjct 196 ALQPATPGGRAAGARSRTRSAGTRPAPVAAGSTGEAPVLLHLEIARLAGNPAAELFIRVL 255 Query 173 MRLTKRYVQKSGTQSAGEAVEAAGQ--VHNEHSDIVAAVTAGDSAWAKTLS----ERHVE 226 L E + GQ H H++IV A+T G+ A A+ L+ RHVE Sbjct 256 ADLAHPR----------EETDRLGQWWQHPLHAEIVDAITRGEGALAEHLARSCIRRHVE 305 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 96/288 (34%), Positives = 125/288 (44%), Gaps = 54/288 (18%) Query 238 GNDAAVRNGGRAREPRRAQQLILGAP--------RGKLAEVLAATIGDDIAASGWQVGSV 289 G AA R G E A L++G P + LA LA TI +I GW VG Sbjct 38 GGHAAGRRAGGHAENGGAIGLVVGEPEEPTSRFGQRTLASRLARTIELEIIRRGWPVGEG 97 Query 290 FGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQ 349 G+E L+ERYQV R+VLREAVRLLE +A R GPGGGLVVT P D +YL Sbjct 98 LGSEAQLMERYQVGRSVLREAVRLLESRWVARPRPGPGGGLVVTAPDHDGVRDVARVYLD 157 Query 350 YRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDN----PTDDVRAAA 405 + + E L A+E V ++ +R +DT G RL T RAA Sbjct 158 FARARPEHLCETWSALEAVAVRRLAER---------IDTAGLTRLRGALQPATPGGRAAG 208 Query 406 VEE---------------------FRFHVGLARAAGNTMLDLFLLILVELFRRHLSSTEQ 444 H+ +AR AGN +LF+ +L +L H Sbjct 209 ARSRTRSAGTRPAPVAAGSTGEAPVLLHLEIARLAGNPAAELFIRVLADLA--HPREETD 266 Query 445 ALPTWSDVVAVGHA-HVRILEAIGSGD----DSLARCRTRRHLDAAAS 487 L W H H I++AI G+ + LAR RRH++ A + Sbjct 267 RLGQWWQ-----HPLHAEIVDAITRGEGALAEHLARSCIRRHVEEATA 309 >gi|288918203|ref|ZP_06412558.1| GntR domain protein [Frankia sp. EUN1f] gi|288350373|gb|EFC84595.1| GntR domain protein [Frankia sp. EUN1f] Length=282 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 85/240 (36%), Positives = 115/240 (48%), Gaps = 37/240 (15%) Query 14 ASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPN 73 AS++AR IE +I+RRGWP+G LGSE+ L +R+ V RSVLREAVRL+E VAR R GP Sbjct 46 ASRLARTIELEIIRRGWPVGEGLGSEAQLMERYQVGRSVLREAVRLLESRWVARPRPGPG 105 Query 74 GGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRA 133 GGL + P+ +YL++ L LE +A +E ID G+ RLR Sbjct 106 GGLVVTAPDHDGVRDVARVYLDFARARPEHLCETWSALEAVAVRRLSEQIDTAGLTRLRG 165 Query 134 VLR--------AEERWRP------------GLPPPPEQFYRV-LAEQSKNPVLQLFIDIL 172 L A R R G P + +A + NP +LFI +L Sbjct 166 ALEPTAPGARAASPRARSRSVGARSGPVTAGTPGEASVLLHLEIARLAGNPAAELFIRVL 225 Query 173 MRLTKRYVQKSGTQSAGEAVEAAGQ--VHNEHSDIVAAVTAGDSAWAKTLS----ERHVE 226 L + + E GQ H H++IV A+T G+ A A+ L+ RHVE Sbjct 226 ADLAHPH----------DETERLGQWWQHPLHAEIVDAITRGEGALAEHLARSCIRRHVE 275 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 90/250 (36%), Positives = 116/250 (47%), Gaps = 44/250 (17%) Query 267 LAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGP 326 LA LA TI +I GW VG G+E L+ERYQV R+VLREAVRLLE +A R GP Sbjct 45 LASRLARTIELEIIRRGWPVGEGLGSEAQLMERYQVGRSVLREAVRLLESRWVARPRPGP 104 Query 327 GGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASFL 386 GGGLVVT P D +YL + + E L A+E A V+R SE + Sbjct 105 GGGLVVTAPDHDGVRDVARVYLDFARARPEHLCETWSALE----AVAVRRLSEQ-----I 155 Query 387 DTLGRPRLDN---PTDDVRAAAVEEFR----------------------FHVGLARAAGN 421 DT G RL PT AA R H+ +AR AGN Sbjct 156 DTAGLTRLRGALEPTAPGARAASPRARSRSVGARSGPVTAGTPGEASVLLHLEIARLAGN 215 Query 422 TMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGD----DSLARCR 477 +LF+ +L +L H TE+ W + H I++AI G+ + LAR Sbjct 216 PAAELFIRVLADLAHPH-DETERLGQWWQHPL-----HAEIVDAITRGEGALAEHLARSC 269 Query 478 TRRHLDAAAS 487 RRH++ A + Sbjct 270 IRRHVEEATA 279 >gi|209515541|ref|ZP_03264406.1| GntR domain protein [Burkholderia sp. H160] gi|209504008|gb|EEA03999.1| GntR domain protein [Burkholderia sp. H160] Length=291 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/211 (32%), Positives = 106/211 (51%), Gaps = 4/211 (1%) Query 25 IVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPNGGLFICEPNAG 84 I+ GWP G LGSE L + SR+ +R A+RL+EHH + R +RG GL + +P+ Sbjct 83 IIDLGWPEGLPLGSEQELMKVHGASRAAVRGAIRLLEHHSIVRTQRGIGCGLIVAQPDLS 142 Query 85 PATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRAVLRAEERWRPG 144 +AV +YLEY G D+L R LE A L E +D G RLR ++ AE + G Sbjct 143 ATMQAVSVYLEYAGIAPRDILATRRTLELAALDLVIERLDHEGEHRLRDLVEAEAQL-DG 201 Query 145 LPPPPE--QFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSAGEAVEAAGQVHNEH 202 E +F+ +LAE S +P L+LF I+++L + ++ + ++ H Sbjct 202 RAGADELLRFHFLLAELSGDPALRLFNGIVLQLADAH-STFHRRNRPDRDRVVARIKEYH 260 Query 203 SDIVAAVTAGDSAWAKTLSERHVEAVAGWLQ 233 +I + A D A+ ++ + WL+ Sbjct 261 REIARTIIARDRKQARGQIAEYIAGIRTWLE 291 Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 76/243 (32%), Positives = 119/243 (49%), Gaps = 17/243 (6%) Query 252 PRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAV 311 PRR + LGAP + A+ L ++ I GW G G+E L++ + SRA +R A+ Sbjct 58 PRRKRN-ALGAPVTR-AQTLFVSMLKHIIDLGWPEGLPLGSEQELMKVHGASRAAVRGAI 115 Query 312 RLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVA 371 RLLE+H+I +RG G GL+V P A++ +++YL+Y + D+ R +E+ + Sbjct 116 RLLEHHSIVRTQRGIGCGLIVAQPDLSATMQAVSVYLEYAGIAPRDILATRRTLELAALD 175 Query 372 KVVKRRSEPEVASFLDTLGRPRLDNPTD-----DVRAAAVEEFRFHVGLARAAGNTMLDL 426 V++R LD G RL + + D RA A E RFH LA +G+ L L Sbjct 176 LVIER---------LDHEGEHRLRDLVEAEAQLDGRAGADELLRFHFLLAELSGDPALRL 226 Query 427 FLLILVELFRRHLSSTEQALPTWSDVVA-VGHAHVRILEAIGSGDDSLARCRTRRHLDAA 485 F I+++L H + + P VVA + H I I + D AR + ++ Sbjct 227 FNGIVLQLADAHSTFHRRNRPDRDRVVARIKEYHREIARTIIARDRKQARGQIAEYIAGI 286 Query 486 ASW 488 +W Sbjct 287 RTW 289 >gi|345137933|dbj|BAK67542.1| putative GntR family transcriptional regulator [Sphingobium sp. SYK-6] Length=470 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 128/435 (30%), Positives = 183/435 (43%), Gaps = 68/435 (15%) Query 14 ASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPN 73 A ++AR+IE DI + G +LGS L R+ V R+V+REAV L+E + +R GP Sbjct 22 AEQLARQIEDDIAWQRLTAGEALGSLRDLSDRYSVGRAVIREAVGLLERRGLGSLRPGPC 81 Query 74 GGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA-EHIDEPGIERLR 132 GG + P A + Y T+ LL AR ++ + A LAA P + RL Sbjct 82 GGFIVKTPLAQSIGEEIADYFRTADITLAHLLDAREAVDHMIARLAALARPPLPRLVRLE 141 Query 133 AVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSAGEAV 192 A +R PGL LA + PV+ L I L LT + + G+ Sbjct 142 AAVRT-----PGLGGHL-ALRNELARLTGEPVVMLLIKCLNSLTLDFAMDGA--APGDQP 193 Query 193 EAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGNDAAVRNGGRAREP 252 A E A+ GD+ A +Q+ R +D R+ P Sbjct 194 RIAIATMRE------ALANGDTEMA--------------VQEADRLHDELTRH----LHP 229 Query 253 RRAQQLILGAPRGKLAE--VLAATIGDDIA---ASGWQVGSVFGTETALLERYQVSRAVL 307 ++A Q I +LA+ LA ++ +A A G G+E L ER+ VSR L Sbjct 230 QKASQDIRPIESARLADERTLAVSVARKLAVEIARSGTTGQRLGSEWDLCERFSVSRLTL 289 Query 308 REAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLR-------- 359 R+A+R+L+ + RRG G GLVV + + TI L L Y + D+R Sbjct 290 RQAIRILQDSGLVECRRGRGNGLVV---RNRRGTGTIRLMLAYLIGQQMDVRAAGTILFQ 346 Query 360 --CVRDAIEIDNVAKVVKRRSEPEVASFL---DTLGRPRL-----------DNPTDDV-- 401 C A+ + A +RR+ + S L DTL R L +P D+ Sbjct 347 LNCFMPALAVSR-ADSEQRRALERLISRLEESDTLERYDLLSLVQCVSQLAQSPIIDLFS 405 Query 402 RAAAVEEFRFHVGLA 416 R A E RFH LA Sbjct 406 RCLAAYEARFHPSLA 420 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/101 (41%), Positives = 55/101 (55%), Gaps = 0/101 (0%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 +LAE LA I DDIA G G+ L +RY V RAV+REAV LLE + +R G Sbjct 20 RLAEQLARQIEDDIAWQRLTAGEALGSLRDLSDRYSVGRAVIREAVGLLERRGLGSLRPG 79 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIE 366 P GG +V TP Q+ + IA Y + + L R+A++ Sbjct 80 PCGGFIVKTPLAQSIGEEIADYFRTADITLAHLLDAREAVD 120 >gi|331696567|ref|YP_004332806.1| GntR domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326951256|gb|AEA24953.1| GntR domain protein [Pseudonocardia dioxanivorans CB1190] Length=261 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 73/229 (32%), Positives = 112/229 (49%), Gaps = 11/229 (4%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A +A + I+R G +L SE+AL ++F VSR LREA R++E + +RRG Sbjct 23 KMAELVAGHLRRQIIRGELAAGDALPSEAALMEQFQVSRPTLREAFRVLESESLISVRRG 82 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERL 131 +GG + P+A A R LEY GTT+ D+ ARLVLEP +L AE E + RL Sbjct 83 AHGGARVQVPDADVAARYAGFILEYRGTTLEDVYDARLVLEPPCVALLAERRTEQDVARL 142 Query 132 RAVLRAEERWRPGLPPPPEQ---FYRVLAEQSKNPVLQLFIDILMRLT-----KRYVQKS 183 R L A + R F+ +L E ++N LQ+ I ++ + + Sbjct 143 REALTAHDAVRDDHDRTIRTHMAFHTLLTELTRNQTLQVLIGMIDHIIALANWSHVSSDA 202 Query 184 GTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWL 232 GT + A+ + H+ +V + A D+ A+ L +H+E +L Sbjct 203 GTPAHLRAIRRGLRAHHL---VVDYIEARDAVAAEALWRKHLEEARDYL 248 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 69/249 (28%), Positives = 105/249 (43%), Gaps = 30/249 (12%) Query 261 GAPRG------KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLL 314 G+P G K+AE++A + I G +E AL+E++QVSR LREA R+L Sbjct 12 GSPVGRQLRVPKMAELVAGHLRRQIIRGELAAGDALPSEAALMEQFQVSRPTLREAFRVL 71 Query 315 EYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVV 374 E ++ +RRG GG V P + L+YR + ED+ R +E VA + Sbjct 72 ESESLISVRRGAHGGARVQVPDADVAARYAGFILEYRGTTLEDVYDARLVLEPPCVALLA 131 Query 375 KRRSEPEVASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVEL 434 +RR+E +VA + L D DD FH L N L + + ++ + Sbjct 132 ERRTEQDVARLREALTAH--DAVRDDHDRTIRTHMAFHTLLTELTRNQTLQVLIGMIDHI 189 Query 435 FRRHLSSTEQALPTWSDVVAVG-------------HAHVRILEAIGSGDDSLARCRTRRH 481 AL WS V + AH +++ I + D A R+H Sbjct 190 I---------ALANWSHVSSDAGTPAHLRAIRRGLRAHHLVVDYIEARDAVAAEALWRKH 240 Query 482 LDAAASWWL 490 L+ A + L Sbjct 241 LEEARDYLL 249 >gi|295689151|ref|YP_003592844.1| regulatory protein GntR HTH [Caulobacter segnis ATCC 21756] gi|295431054|gb|ADG10226.1| regulatory protein GntR HTH [Caulobacter segnis ATCC 21756] Length=377 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/173 (40%), Positives = 84/173 (49%), Gaps = 27/173 (15%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A IARRIE D++ RGWPIG GSE+ L RF VSR VLREAVR++E ARMRRG Sbjct 9 KAACAIARRIEGDLIARGWPIGTIYGSEAELADRFGVSRMVLREAVRILESRGTARMRRG 68 Query 72 PNGGLFICEPNAGPATRAVVIY------LEYLGTTIGDLLGARLV--------------L 111 PNGGL + P A+ Y L+ G+ +L A + + Sbjct 69 PNGGLLVLAPEMAAVLEAIHRYVTSHRGLDLQGSICRQVLNAAHLQTAHPSSGRPIGAGM 128 Query 112 EPLAASLAA--EHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKN 162 E A L A EH G E R +RA PG EQ +R+L + N Sbjct 129 EDFLAGLTAAVEHYAREGAEG-RIAMRAT----PGARSRAEQVFRLLIKDLGN 176 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/83 (47%), Positives = 54/83 (66%), Gaps = 0/83 (0%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 K A +A I D+ A GW +G+++G+E L +R+ VSR VLREAVR+LE A MRRG Sbjct 9 KAACAIARRIEGDLIARGWPIGTIYGSEAELADRFGVSRMVLREAVRILESRGTARMRRG 68 Query 326 PGGGLVVTTPQPQASIDTIALYL 348 P GGL+V P+ A ++ I Y+ Sbjct 69 PNGGLLVLAPEMAAVLEAIHRYV 91 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/92 (36%), Positives = 49/92 (54%), Gaps = 2/92 (2%) Query 290 FGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQ 349 G+E L ERY R+VLR+AVR+LE+ +A G G GL+ +P P A I+ Y Sbjct 184 LGSEMDLCERYGADRSVLRQAVRMLEFEGVAVSTAGRGKGLMTRSPDPTALCQLISCYFA 243 Query 350 YRKPSREDLRCV--RDAIEIDNVAKVVKRRSE 379 + +D V R +IE+ ++A V S+ Sbjct 244 AVGVTPDDAMAVFKRLSIEVVSIAARVATNSD 275 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/148 (32%), Positives = 70/148 (48%), Gaps = 11/148 (7%) Query 36 LGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLE 95 LGSE L +R+ RSVLR+AVR++E VA G GL P+ + + Y Sbjct 184 LGSEMDLCERYGADRSVLRQAVRMLEFEGVAVSTAGRGKGLMTRSPDPTALCQLISCYFA 243 Query 96 YLGTTIGDLLGA--RLVLEPLA-ASLAAEHIDEPGIERLRAVLRAEERWRPGLPPPPEQF 152 +G T D + RL +E ++ A+ A + D ++R R RW Sbjct 244 AVGVTPDDAMAVFKRLSIEVVSIAARVATNSDRTRLKRAR-------RWLSERHGTVSAD 296 Query 153 YRVLAEQSKNPVL-QLFIDILMRLTKRY 179 LAE+S+ ++ + IDIL+R TK Y Sbjct 297 VMQLAEESQFRIVSEPLIDILLRCTKSY 324 >gi|111026356|ref|YP_708639.1| GntR family transcriptional regulator [Rhodococcus jostii RHA1] gi|110825199|gb|ABH00481.1| possible transcriptional regulator, GntR family [Rhodococcus jostii RHA1] Length=228 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/235 (33%), Positives = 107/235 (46%), Gaps = 26/235 (11%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 K+ + A I I A GW VG GTE L+ER+ VSRA LREA+R+LEY + MRRG Sbjct 4 KVGALTADRIARAIVAEGWPVGMHLGTELELMERFTVSRAGLREAIRILEYQGVVEMRRG 63 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEP---EV 382 GGL V+ P + + YL +R+ E L R IE+ + VV R + ++ Sbjct 64 RSGGLRVSAPDGSGIVASAVRYLTFRRVRPEHLLEARRIIELSLIPLVVDRMNNENARQL 123 Query 383 ASFLD--TLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFL-----LILVELF 435 +LD G+P P+ A+ FH L GN L LF L+ + + Sbjct 124 QQYLDQEVAGQP----PSSPGNASK----GFHTLLGALTGNPALKLFTHVLESLVHMRFY 175 Query 436 RRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAASWWL 490 HLSS E V HVR+ EA+ D A + L+ +++ Sbjct 176 ALHLSSAEAP--------EVHGFHVRVGEALIDRDLPRALAEFEKTLEHTKRYYI 222 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 69/218 (32%), Positives = 102/218 (47%), Gaps = 7/218 (3%) Query 11 DKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRR 70 DK + A RI IV GWP+G LG+E L +RF VSR+ LREA+R++E+ V MRR Sbjct 3 DKVGALTADRIARAIVAEGWPVGMHLGTELELMERFTVSRAGLREAIRILEYQGVVEMRR 62 Query 71 GPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIER 130 G +GGL + P+ + V YL + LL AR ++E L + ++ + Sbjct 63 GRSGGLRVSAPDGSGIVASAVRYLTFRRVRPEHLLEARRIIELSLIPLVVDRMNNENARQ 122 Query 131 LRAVLRAEERWRPGLPP--PPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSA 188 L+ L E +P P + F+ +L + NP L+LF +L L SA Sbjct 123 LQQYLDQEVAGQPPSSPGNASKGFHTLLGALTGNPALKLFTHVLESLVHMRFYALHLSSA 182 Query 189 GEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVE 226 A +VH H + A+ D A E+ +E Sbjct 183 -----EAPEVHGFHVRVGEALIDRDLPRALAEFEKTLE 215 >gi|300785768|ref|YP_003766059.1| GntR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|299795282|gb|ADJ45657.1| GntR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|340527231|gb|AEK42436.1| GntR family transcriptional regulator [Amycolatopsis mediterranei S699] Length=251 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/229 (31%), Positives = 108/229 (48%), Gaps = 9/229 (3%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 K E++AA + I G +ETAL+E+Y VSR LREA R+LE + +RRG Sbjct 14 KAGEMIAADLRRQIVLGELTEGQALPSETALMEQYGVSRPTLREAFRILESEQLISIRRG 73 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASF 385 GG V P + + L LQYRK S D+ R +E V + +R+ +V + Sbjct 74 ARGGARVLVPDSRVAARYAGLLLQYRKASIADVYEARSLLETAAVRTLAAKRTAADVQAL 133 Query 386 LDTL--GRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLF---LLILVELFRRHLS 440 D + G + N A + FH L + +GN LD+ L L++ R + Sbjct 134 ADLVEKGEALIGNAV----GYAEHDAEFHELLVKLSGNDTLDVLAGMLFHLIDAHHRAYA 189 Query 441 STEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAASWW 489 + + +P ++ V AHV++LE I + D A R+HL +++ Sbjct 190 AGQDEVPAFASAKVVQRAHVKLLELIRARDADQAMEFWRKHLKQVSNYM 238 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/204 (27%), Positives = 95/204 (47%), Gaps = 4/204 (1%) Query 33 GASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPNGGLFICEPNAGPATRAVVI 92 G +L SE+AL +++ VSR LREA R++E Q+ +RRG GG + P++ A R + Sbjct 35 GQALPSETALMEQYGVSRPTLREAFRILESEQLISIRRGARGGARVLVPDSRVAARYAGL 94 Query 93 YLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRAVLRAEERW---RPGLPPPP 149 L+Y +I D+ AR +LE A A ++ L ++ E G Sbjct 95 LLQYRKASIADVYEARSLLETAAVRTLAAKRTAADVQALADLVEKGEALIGNAVGYAEHD 154 Query 150 EQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQK-SGTQSAGEAVEAAGQVHNEHSDIVAA 208 +F+ +L + S N L + +L L + + + Q A +A V H ++ Sbjct 155 AEFHELLVKLSGNDTLDVLAGMLFHLIDAHHRAYAAGQDEVPAFASAKVVQRAHVKLLEL 214 Query 209 VTAGDSAWAKTLSERHVEAVAGWL 232 + A D+ A +H++ V+ ++ Sbjct 215 IRARDADQAMEFWRKHLKQVSNYM 238 >gi|72161693|ref|YP_289350.1| GntR family transcriptional regulator [Thermobifida fusca YX] gi|71915425|gb|AAZ55327.1| transcriptional regulator, GntR family [Thermobifida fusca YX] Length=253 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 71/242 (30%), Positives = 116/242 (48%), Gaps = 20/242 (8%) Query 5 PDAVWTDKRASKI----ARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLV 60 P V ++R+ K+ AR I DI +R + L SESA+ +R+ V+R LREA+R++ Sbjct 11 PSGVTWERRSEKVSEIVAREIVRDIAKRRPAPNSVLESESAMIKRYQVARGSLREALRIL 70 Query 61 EHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAA 120 E H + RM+ GP GG + E ++ R ++ + L +L+ ARL+LEP A LAA Sbjct 71 EVHGLIRMKPGPGGGPVLSEVSSRDFGRMATLFFQVLDIRFCELVEARLMLEPFMARLAA 130 Query 121 EHIDEPGIERLRAVL------RAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMR 174 E D E LRA++ + + W + F+ + S N +L L I Sbjct 131 ERHDPKDHEELRAIVQQGFAAKTTDAWLQA----TDAFHTKVLSMSGNGLLTL---IACA 183 Query 175 LTKRYVQKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQ 234 L + +++ T + HS+I AV GD+ A+ L H++ A + + Sbjct 184 LKDIFTERASTIYVA---NEGDHIRETHSEIAEAVIGGDAETAERLMREHLQEYADLVAE 240 Query 235 HQ 236 + Sbjct 241 RE 242 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 64/221 (29%), Positives = 102/221 (47%), Gaps = 7/221 (3%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 K++E++A I DIA SV +E+A+++RYQV+R LREA+R+LE H + M+ G Sbjct 22 KVSEIVAREIVRDIAKRRPAPNSVLESESAMIKRYQVARGSLREALRILEVHGLIRMKPG 81 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASF 385 PGGG V++ + L+ Q +L R +E +A++ R +P+ Sbjct 82 PGGGPVLSEVSSRDFGRMATLFFQVLDIRFCELVEARLMLE-PFMARLAAERHDPKDHEE 140 Query 386 LDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSSTEQA 445 L + + T D A + FH + +GN +L L L ++F S+ A Sbjct 141 LRAIVQQGFAAKTTDAWLQATDA--FHTKVLSMSGNGLLTLIACALKDIFTERASTIYVA 198 Query 446 LPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAA 486 ++ + H I EA+ GD A R HL A Sbjct 199 ----NEGDHIRETHSEIAEAVIGGDAETAERLMREHLQEYA 235 >gi|330807687|ref|YP_004352149.1| GntR family transcriptional regulator [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375795|gb|AEA67145.1| putative Transcription factor, GntR family [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length=438 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 82/324 (26%), Positives = 141/324 (44%), Gaps = 45/324 (13%) Query 21 IEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPNGGLFICE 80 +E D+ R WP G +GS S L+QRF + R V +E + +++ ++ +RRG GGL++ Sbjct 4 MEEDLCARDWPEGHLIGSVSELRQRFGMGRKVCQEVIAIMQTRRLINVRRGVGGGLYVSR 63 Query 81 PNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRAVLRAEER 140 P +A++++L T+ L ARL++ LA +R+++R Sbjct 64 PGLNDTVQALILHLVLSRTSPLALRDARLIVCQLA---------------IRSLIRRNVP 108 Query 141 WRPGLPPPP------EQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSAGEAVEA 194 + P FYR LA NP + +D+L L +R+V ++ Sbjct 109 FIYQDTPSNIGKASGSNFYRQLAHACGNPAIAFLMDLLEELQQRFVAADPQKA------- 161 Query 195 AGQVHNEHSD--IVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGNDAAVRNGGRAREP 252 ++H E D ++ A+ +GD+ A L + ++ D N R + Sbjct 162 --EIHTELLDKALIEAMRSGDAEMACCLVRDRIHSL-----------DLVGVN--RPMDQ 206 Query 253 RRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVR 312 +Q + LA I ++I A V G+E + RY + ++R A+R Sbjct 207 VSFEQTTTFLDMKNSSGRLAGLIVEEILAHAATVSFKLGSEWDIGARYGFASEIVRPALR 266 Query 313 LLEYHAIAHMRRGPGGGLVVTTPQ 336 +LE I RG GG+V T P+ Sbjct 267 ILEDLGIVECCRGRSGGVVSTQPR 290 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 52/207 (26%), Positives = 99/207 (48%), Gaps = 19/207 (9%) Query 273 ATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGPGGGLVV 332 A + +D+ A W G + G+ + L +R+ + R V +E + +++ + ++RRG GGGL V Sbjct 2 AEMEEDLCARDWPEGHLIGSVSELRQRFGMGRKVCQEVIAIMQTRRLINVRRGVGGGLYV 61 Query 333 TTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASFLDTLGRP 392 + P ++ + L+L + S LR R I + + RR+ P + Sbjct 62 SRPGLNDTVQALILHLVLSRTSPLALRDAR-LIVCQLAIRSLIRRNVPFIYQ-------- 112 Query 393 RLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSSTEQALPTWSDV 452 D P++ +A+ F+ LA A GN + + +L EL +R +++ Q +++ Sbjct 113 --DTPSNIGKASGSN---FYRQLAHACGNPAIAFLMDLLEELQQRFVAADPQKAEIHTEL 167 Query 453 VAVGHAHVRILEAIGSGDDSLARCRTR 479 + ++EA+ SGD +A C R Sbjct 168 LDKA-----LIEAMRSGDAEMACCLVR 189 >gi|297183571|gb|ADI19699.1| transcriptional regulators [uncultured Rhizobiales bacterium HF4000_48A13] Length=267 Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/164 (37%), Positives = 85/164 (52%), Gaps = 2/164 (1%) Query 265 GKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRR 324 GK A +A I DDI G +VG E +L RY V+RA LREA+R LE I +R Sbjct 18 GKRALTVARQIVDDIEQQGAEVGDRLPPEQEMLLRYGVARATLREALRFLELQGIIFLRP 77 Query 325 GPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVAS 384 GPGGG VV P+P+ T+AL LQ+ + L VR A+ A +R S+ ++ Sbjct 78 GPGGGPVVQEPRPKDFASTMALLLQFLGTTFRSLIEVRQAVGPTMAALAAERASDEDIDK 137 Query 385 FLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFL 428 +L + + + D + A E RFH LA A+GN ++ + Sbjct 138 LNTSLATLKTLSVSCD--SYAEENRRFHDVLAWASGNPLIGFLI 179 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/169 (33%), Positives = 85/169 (51%), Gaps = 3/169 (1%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 KRA +AR+I DI ++G +G L E + R+ V+R+ LREA+R +E + +R G Sbjct 19 KRALTVARQIVDDIEQQGAEVGDRLPPEQEMLLRYGVARATLREALRFLELQGIIFLRPG 78 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERL 131 P GG + EP + + L++LGTT L+ R + P A+LAAE + I++L Sbjct 79 PGGGPVVQEPRPKDFASTMALLLQFLGTTFRSLIEVRQAVGPTMAALAAERASDEDIDKL 138 Query 132 RAVLRAEERWRPGLPPPPEQ---FYRVLAEQSKNPVLQLFIDILMRLTK 177 L + E+ F+ VLA S NP++ I L +T Sbjct 139 NTSLATLKTLSVSCDSYAEENRRFHDVLAWASGNPLIGFLISSLHNITN 187 >gi|297204628|ref|ZP_06922025.1| GntR regulatory protein [Streptomyces sviceus ATCC 29083] gi|197710696|gb|EDY54730.1| GntR regulatory protein [Streptomyces sviceus ATCC 29083] Length=267 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/227 (32%), Positives = 110/227 (49%), Gaps = 9/227 (3%) Query 8 VWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVAR 67 V K A +A + IVR G +L ES L ++F +SR LREA R++E + Sbjct 25 VRVPKTAELVAAHLRRQIVRGELKPGDALPPESGLMEQFGISRPTLREAFRVLESESLIT 84 Query 68 MRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLE-PLAASLAAEHIDEP 126 +RRG +GG + P++ A R + LEY G T+GD+ A ++E P A LA +H + Sbjct 85 VRRGAHGGARVSAPDSDVAARFAGLILEYRGATLGDIYRAAALIEPPCARQLATKHTAD- 143 Query 127 GIERLRAVLRAEERWRP---GLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKS 183 I+RLR + AE+ L + F+ +L E + N L L +L + R S Sbjct 144 DIKRLRDAVAAEKAVLDDPLALVDAQDAFHALLVELTGNQTLILLCGMLRNIIDR-ANAS 202 Query 184 GTQSAGEAVEAAGQV---HNEHSDIVAAVTAGDSAWAKTLSERHVEA 227 T A +A Q H H +V + +G + A+ L +RH+ + Sbjct 203 YTAGAADAEAQKTQALKGHRAHVRMVGLIESGKADEAEKLWQRHISS 249 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/226 (27%), Positives = 99/226 (44%), Gaps = 10/226 (4%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 K AE++AA + I + G E+ L+E++ +SR LREA R+LE ++ +RRG Sbjct 29 KTAELVAAHLRRQIVRGELKPGDALPPESGLMEQFGISRPTLREAFRVLESESLITVRRG 88 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASF 385 GG V+ P + L L+YR + D+ IE ++ + + ++ Sbjct 89 AHGGARVSAPDSDVAARFAGLILEYRGATLGDIYRAAALIEPPCARQLATKHTADDIKRL 148 Query 386 LDTLGRPR--LDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRR----HL 439 D + + LD+P V A + FH L GN L L +L + R + Sbjct 149 RDAVAAEKAVLDDPLALVDA----QDAFHALLVELTGNQTLILLCGMLRNIIDRANASYT 204 Query 440 SSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAA 485 + A + + AHVR++ I SG A +RH+ +A Sbjct 205 AGAADAEAQKTQALKGHRAHVRMVGLIESGKADEAEKLWQRHISSA 250 >gi|330468098|ref|YP_004405841.1| GntR family transcriptional regulator [Verrucosispora maris AB-18-032] gi|328811069|gb|AEB45241.1| GntR family transcriptional regulator [Verrucosispora maris AB-18-032] Length=234 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/156 (36%), Positives = 88/156 (57%), Gaps = 4/156 (2%) Query 17 IARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPNGGL 76 +AR+I DIV +G GA+L +E+ + Q + VSR LREA+R++EH+ + R+R G GG Sbjct 5 VARQILEDIVEQGLSPGAALPTEAQMLQAYGVSRGTLREALRILEHNGLLRVRPGRGGGP 64 Query 77 FICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRAVLR 136 + + R + ++++ T G+L+ AR+++EPL A LAAE D + L +R Sbjct 65 IVGAVDPHTFGRTMALFMQMGRTRFGELVEARVIMEPLMARLAAERRDAARLRELAESMR 124 Query 137 A----EERWRPGLPPPPEQFYRVLAEQSKNPVLQLF 168 EER ++F+ V+A S N VL LF Sbjct 125 EHSTLEERDEASYLAVMQRFHGVVAGLSGNGVLDLF 160 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/186 (31%), Positives = 91/186 (49%), Gaps = 1/186 (0%) Query 267 LAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGP 326 + E++A I +DI G G+ TE +L+ Y VSR LREA+R+LE++ + +R G Sbjct 1 MGELVARQILEDIVEQGLSPGAALPTEAQMLQAYGVSRGTLREALRILEHNGLLRVRPGR 60 Query 327 GGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASFL 386 GGG +V P T+AL++Q + +L R +E +RR + Sbjct 61 GGGPIVGAVDPHTFGRTMALFMQMGRTRFGELVEARVIMEPLMARLAAERRDAARLRELA 120 Query 387 DTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSSTEQAL 446 +++ D+ AV + RFH +A +GN +LDLF L E++ + + E+ Sbjct 121 ESMREHSTLEERDEASYLAVMQ-RFHGVVAGLSGNGVLDLFGRALKEIYTERVVAAERRP 179 Query 447 PTWSDV 452 W DV Sbjct 180 ERWEDV 185 >gi|111222543|ref|YP_713337.1| GntR family transcriptional regulator [Frankia alni ACN14a] gi|111150075|emb|CAJ61770.1| Putative GntR-family transcriptional regulator [Frankia alni ACN14a] Length=251 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 74/232 (32%), Positives = 112/232 (49%), Gaps = 13/232 (5%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 K AE++AATI I + +E+AL+E++ VSR LREA R+LE ++ +RRG Sbjct 13 KAAELVAATIRRQIITGELLEDHLLPSESALMEQFHVSRPTLREAFRILESESLITVRRG 72 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPE-VAS 384 GG V P + + L+YR + D+ R +E +A++V + PE +A Sbjct 73 VHGGARVQIPNGDVAARYVGYVLEYRGTTMADVYRARAEVEAP-LARLVATSATPENIAR 131 Query 385 FLDTLGR--PRLDNPTDDVRAAAVEEFRFHVGLARAAGN----TMLDLFLLILVELFRRH 438 + L R LD P+ A V + FH +A A N MLD+ I+ RR+ Sbjct 132 LEECLARAEAHLDEPS----AFIVHDEEFHRLMAELADNQTLAVMLDMMYHIVGTARRRY 187 Query 439 LSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAASWWL 490 + +Q T + V V +HVR+++ I G L RHLD A +L Sbjct 188 ALNVDQG-QTRKETVEVHRSHVRLVDLIKRGRPDLVHRLWLRHLDEATRHYL 238 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/207 (35%), Positives = 100/207 (49%), Gaps = 13/207 (6%) Query 36 LGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLE 95 L SESAL ++F VSR LREA R++E + +RRG +GG + PN A R V LE Sbjct 37 LPSESALMEQFHVSRPTLREAFRILESESLITVRRGVHGGARVQIPNGDVAARYVGYVLE 96 Query 96 YLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRAVL-RAEERWR--PGLPPPPEQF 152 Y GTT+ D+ AR +E A L A I RL L RAE E+F Sbjct 97 YRGTTMADVYRARAEVEAPLARLVATSATPENIARLEECLARAEAHLDEPSAFIVHDEEF 156 Query 153 YRVLAEQSKNPVLQLFIDILMRLT----KRY-VQKSGTQSAGEAVEAAGQVHNEHSDIVA 207 +R++AE + N L + +D++ + +RY + Q+ E VE VH H +V Sbjct 157 HRLMAELADNQTLAVMLDMMYHIVGTARRRYALNVDQGQTRKETVE----VHRSHVRLVD 212 Query 208 AVTAGDSAWAKTLSERHV-EAVAGWLQ 233 + G L RH+ EA +L+ Sbjct 213 LIKRGRPDLVHRLWLRHLDEATRHYLE 239 >gi|302547337|ref|ZP_07299679.1| regulatory protein GntR, HTH [Streptomyces hygroscopicus ATCC 53653] gi|302464955|gb|EFL28048.1| regulatory protein GntR, HTH [Streptomyces himastatinicus ATCC 53653] Length=267 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/229 (32%), Positives = 112/229 (49%), Gaps = 16/229 (6%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A +A+ I DIV+R P G L SE+ + + + V R LREA+R++E H + M+ G Sbjct 36 KVAEALAQEIVHDIVKRKLPPGTLLPSEAQMIEDYGVGRGSLREALRILEVHGLITMKPG 95 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERL 131 NGG + E R ++ G T G+LL ARLV+E A LAAE E+L Sbjct 96 RNGGPMVIEVRTRDYGRMSTLFYHLGGVTFGELLEARLVMEATMARLAAERNAPELGEQL 155 Query 132 -----RAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRY-VQKSGT 185 ++V+ ++R+ F+R ++ S NP+L L + M L + Q SG Sbjct 156 AESCEKSVVEDDDRYFAAT----HDFHRKVSSMSGNPILNL---VSMSLEDIFHDQVSGF 208 Query 186 QSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQ 234 + E V H I A+ G +A A+ L +H++ A ++++ Sbjct 209 LFPPDRRE---DVQATHKAIARAIAKGQAATAERLMRQHMQEYADYVRR 254 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/224 (28%), Positives = 103/224 (46%), Gaps = 9/224 (4%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 K+AE LA I DI G++ +E ++E Y V R LREA+R+LE H + M+ G Sbjct 36 KVAEALAQEIVHDIVKRKLPPGTLLPSEAQMIEDYGVGRGSLREALRILEVHGLITMKPG 95 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASF 385 GG +V + + L+ + +L R +E +A++ R+ PE+ Sbjct 96 RNGGPMVIEVRTRDYGRMSTLFYHLGGVTFGELLEARLVMEA-TMARLAAERNAPELGEQ 154 Query 386 L-DTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSSTEQ 444 L ++ + +++ DD AA + FH ++ +GN +L+L + L ++F +S Sbjct 155 LAESCEKSVVED--DDRYFAATHD--FHRKVSSMSGNPILNLVSMSLEDIFHDQVSGFLF 210 Query 445 ALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAASW 488 DV A H I AI G + A R+H+ A + Sbjct 211 PPDRREDVQAT---HKAIARAIAKGQAATAERLMRQHMQEYADY 251 >gi|154252229|ref|YP_001413053.1| GntR domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154156179|gb|ABS63396.1| GntR domain protein [Parvibaculum lavamentivorans DS-1] Length=267 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/164 (36%), Positives = 85/164 (52%), Gaps = 2/164 (1%) Query 265 GKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRR 324 GK A +A I +DI G +VG E +L RY V+RA LREA+R LE I +R Sbjct 18 GKRALTVARQIVEDIEQQGAEVGDRLLPEQEMLVRYGVARATLREALRFLELQGIIFLRP 77 Query 325 GPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVAS 384 GPGGG +V P+P+ T+AL LQ+ + L VR A+ A +R S+ ++ Sbjct 78 GPGGGPIVQEPRPKDFASTMALLLQFLGTTFRSLIEVRQAVGPTMAALAAERASDEDIDK 137 Query 385 FLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFL 428 +L + + + D + A E RFH LA A+GN ++ + Sbjct 138 LNTSLATLKTLSVSCD--SYAEENRRFHDVLAWASGNPLIGFLI 179 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/169 (33%), Positives = 85/169 (51%), Gaps = 3/169 (1%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 KRA +AR+I DI ++G +G L E + R+ V+R+ LREA+R +E + +R G Sbjct 19 KRALTVARQIVEDIEQQGAEVGDRLLPEQEMLVRYGVARATLREALRFLELQGIIFLRPG 78 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERL 131 P GG + EP + + L++LGTT L+ R + P A+LAAE + I++L Sbjct 79 PGGGPIVQEPRPKDFASTMALLLQFLGTTFRSLIEVRQAVGPTMAALAAERASDEDIDKL 138 Query 132 RAVLRAEERWRPGLPPPPEQ---FYRVLAEQSKNPVLQLFIDILMRLTK 177 L + E+ F+ VLA S NP++ I L +T Sbjct 139 NTSLATLKTLSVSCDSYAEENRRFHDVLAWASGNPLIGFLIGSLHNITN 187 >gi|88854838|ref|ZP_01129504.1| putative transcription regulator [marine actinobacterium PHSC20C1] gi|88815999|gb|EAR25855.1| putative transcription regulator [marine actinobacterium PHSC20C1] Length=259 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/223 (31%), Positives = 106/223 (48%), Gaps = 5/223 (2%) Query 264 RGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMR 323 R K E++ I D+I A + G E + E VSR +REA+R+LE I R Sbjct 20 RAKTYELVVKKIKDEIFAGRLRPGDRLPGERQMSELLNVSRPSVREAIRILEAMEIVRSR 79 Query 324 --RGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPE 381 G G GLVV+T +A D + +++ S ++ VR A+E+ V ++ R + + Sbjct 80 PGNGVGSGLVVSTEPSRALSDLLGVHVALSSYSVPEVLSVRMALEVQAVRRIATRVASID 139 Query 382 VASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSS 441 ++ DTL R+ +P D + + FHVGLARA+ N +L + L E RR ++ Sbjct 140 LSQCADTLQ--RMADPLLDRESFLDLDTEFHVGLARASNNLLLGDLMAALREAVRRPMAD 197 Query 442 TEQALPTWSD-VVAVGHAHVRILEAIGSGDDSLARCRTRRHLD 483 W++ V + H I EA+ G A R H++ Sbjct 198 AFDNDNDWAERAVTLMSEHTAIFEAVSQGHADEAESLVRHHIE 240 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 49/216 (23%), Positives = 95/216 (44%), Gaps = 8/216 (3%) Query 17 IARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPNG-- 74 + ++I+ +I G L E + + VSR +REA+R++E ++ R R G NG Sbjct 27 VVKKIKDEIFAGRLRPGDRLPGERQMSELLNVSRPSVREAIRILEAMEIVRSRPG-NGVG 85 Query 75 -GLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRA 133 GL + + + + +++ ++ ++L R+ LE A A + + + Sbjct 86 SGLVVSTEPSRALSDLLGVHVALSSYSVPEVLSVRMALEVQAVRRIATRVASIDLSQCAD 145 Query 134 VLR--AEERW-RPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSAGE 190 L+ A+ R +F+ LA S N +L + L +R + + + Sbjct 146 TLQRMADPLLDRESFLDLDTEFHVGLARASNNLLLGDLMAALREAVRRPM-ADAFDNDND 204 Query 191 AVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVE 226 E A + +EH+ I AV+ G + A++L H+E Sbjct 205 WAERAVTLMSEHTAIFEAVSQGHADEAESLVRHHIE 240 >gi|51245768|ref|YP_065652.1| transcriptional regulator [Desulfotalea psychrophila LSv54] gi|50876805|emb|CAG36645.1| related to transcriptional regulator [Desulfotalea psychrophila LSv54] Length=271 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/250 (28%), Positives = 116/250 (47%), Gaps = 17/250 (6%) Query 7 AVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVA 66 +V ++K KI R+I I++ G LGSE L + F VS+ LRE + +E+ + Sbjct 14 SVKSEKSTDKIIRQIRRGILKGDLQPGTFLGSEKDLSELFEVSKQTLRETINALEYMGLV 73 Query 67 RMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEP 126 ++GP GG++IC + A + + + + L R+ LEPLAA AAE+I Sbjct 74 TRKKGPGGGVYICRVSEKMAHDLLFNFFCFQQLSPEHLSEMRIALEPLAARAAAENITAE 133 Query 127 GIERLRAVLRAEER-WRPG----LPPPPEQFYRVLAEQSKNPVLQL---FIDILMRLTKR 178 + RL+ + A E+ ++ G + F++ + + S NP++ F++ L+ K Sbjct 134 LLARLKGLNMASEKAFKKGDFNEVDDYAVLFHKEIGKASGNPLIAFTLSFVEDLLSQIKA 193 Query 179 YVQKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAV-AGWLQQHQR 237 + E AG V H I A+ AGD A A VE V AG L+ ++ Sbjct 194 IINVDR--------EFAGNVIMAHKKIYRAMKAGDPAGAAIAMLEDVEDVGAGLLRLSRK 245 Query 238 GNDAAVRNGG 247 + + G Sbjct 246 AALVPINDNG 255 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/200 (26%), Positives = 92/200 (46%), Gaps = 19/200 (9%) Query 279 IAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQ 338 I Q G+ G+E L E ++VS+ LRE + LEY + ++GPGGG+ + + Sbjct 32 ILKGDLQPGTFLGSEKDLSELFEVSKQTLRETINALEYMGLVTRKKGPGGGVYICRVSEK 91 Query 339 ASIDTIALYLQYRKPSREDLRCVRDAIE-------IDNV-AKVVKRRSEPEVASFLDTLG 390 + D + + +++ S E L +R A+E +N+ A+++ R +AS + Sbjct 92 MAHDLLFNFFCFQQLSPEHLSEMRIALEPLAARAAAENITAELLARLKGLNMAS--EKAF 149 Query 391 RPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSSTEQALPTWS 450 + N DD FH + +A+GN ++ F L VE + + ++ Sbjct 150 KKGDFNEVDDYAVL------FHKEIGKASGNPLI-AFTLSFVEDLLSQIKAIINVDREFA 202 Query 451 DVVAVGHAHVRILEAIGSGD 470 V + AH +I A+ +GD Sbjct 203 GNVIM--AHKKIYRAMKAGD 220 >gi|343927863|ref|ZP_08767331.1| putative GntR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] gi|343762504|dbj|GAA14257.1| putative GntR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] Length=266 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/238 (29%), Positives = 105/238 (45%), Gaps = 10/238 (4%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K + A I +DIV G G L +ES + + VSR LREA+R++E + ++RG Sbjct 32 KASETTAAAIVSDIVSLGLRRGDRLPAESDMLANYSVSRETLREALRILEVQGLITLKRG 91 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEP----LAASLAAEHIDEPG 127 P GG F+ NA R +Y G T ++ +LEP A L + E Sbjct 92 PGGGPFVSALNASYLARTATLYFHLAGATYDEVFDTWKILEPQLSAKVARLEDRRLKEAA 151 Query 128 IERLRAVLRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQS 187 R EE + F+ V+AE S N VL L + + +V +G + Sbjct 152 FARFLD-YDVEEHEESEIFSDLNNFHAVIAELSGNRVLTLLTQAIDHIVVEHVLGTGRDT 210 Query 188 AGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHV-EAVAGWLQQHQRGNDAAVR 244 E + ++H+DI A+ AG A+TL H+ E V + ++H +D V+ Sbjct 211 IPE----DDAMSHDHADIAKAIIAGRPRKAETLMHDHISEVVERFRERHPERSDELVQ 264 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 60/208 (29%), Positives = 89/208 (43%), Gaps = 12/208 (5%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 K +E AA I DI + G + G E+ +L Y VSR LREA+R+LE + ++RG Sbjct 32 KASETTAAAIVSDIVSLGLRRGDRLPAESDMLANYSVSRETLREALRILEVQGLITLKRG 91 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVV----KRRSEPE 381 PGGG V+ T LY + +++ +E AKV +R E Sbjct 92 PGGGPFVSALNASYLARTATLYFHLAGATYDEVFDTWKILEPQLSAKVARLEDRRLKEAA 151 Query 382 VASFLDTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSS 441 A FLD D + + FH +A +GN +L L + + H+ Sbjct 152 FARFLD------YDVEEHEESEIFSDLNNFHAVIAELSGNRVLTLLTQAIDHIVVEHVLG 205 Query 442 TEQALPTWSDVVAVGHAHVRILEAIGSG 469 T + D A+ H H I +AI +G Sbjct 206 TGRDTIPEDD--AMSHDHADIAKAIIAG 231 >gi|111222876|ref|YP_713670.1| GntR family transcriptional regulator [Frankia alni ACN14a] gi|111150408|emb|CAJ62106.1| Putative GntR-family transcriptional regulator [Frankia alni ACN14a] Length=243 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/240 (31%), Positives = 115/240 (48%), Gaps = 14/240 (5%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A +A + IVR G +L ESAL +F VSR LREA R++E + +R G Sbjct 5 KSAELVAGHLRRQIVRGELAAGEALPPESALMAQFHVSRPTLREAFRVLESESLITVRMG 64 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERL 131 P GG+ + PN A R + L++ GT + D+L R V EP A + A I RL Sbjct 65 PGGGVRVRPPNVDVAARYAGLILQHQGTALADVLAVREVAEPQAVAHLARAGGPTEITRL 124 Query 132 RAVLRAEERWRPGLPPPP-----EQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQ 186 RA L +E P P E+F+ +L E + N L++ + ++ + + +S Q Sbjct 125 RAAL--DEPAEPAESPLDTLRRLERFHPLLIELTGNQTLRVLMGMIEHIVE-LADRSRVQ 181 Query 187 SAGEAVE---AAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGNDAAV 243 S + + A + H+ +V + A D+ A+ L RH+ A +L +RG+ V Sbjct 182 SDAGSPDLDTAVARSRAAHARVVDLIEARDAERAERLWRRHLVAGRDYL---ERGDGTTV 238 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/230 (30%), Positives = 102/230 (45%), Gaps = 10/230 (4%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 K AE++A + I G E+AL+ ++ VSR LREA R+LE ++ +R G Sbjct 5 KSAELVAGHLRRQIVRGELAAGEALPPESALMAQFHVSRPTLREAFRVLESESLITVRMG 64 Query 326 PGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASF 385 PGGG+ V P + L LQ++ + D+ VR+ E VA + + E+ Sbjct 65 PGGGVRVRPPNVDVAARYAGLILQHQGTALADVLAVREVAEPQAVAHLARAGGPTEITRL 124 Query 386 LDTLGRPR--LDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLI---LVELFRRHLS 440 L P ++P D +R RFH L GN L + + + +VEL R Sbjct 125 RAALDEPAEPAESPLDTLRRLE----RFHPLLIELTGNQTLRVLMGMIEHIVELADRSRV 180 Query 441 STEQALPTWSDVVAVGH-AHVRILEAIGSGDDSLARCRTRRHLDAAASWW 489 ++ P VA AH R+++ I + D A RRHL A + Sbjct 181 QSDAGSPDLDTAVARSRAAHARVVDLIEARDAERAERLWRRHLVAGRDYL 230 >gi|312199331|ref|YP_004019392.1| GntR family transcriptional regulator [Frankia sp. EuI1c] gi|311230667|gb|ADP83522.1| regulatory protein GntR HTH [Frankia sp. EuI1c] Length=523 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 103/362 (29%), Positives = 156/362 (44%), Gaps = 23/362 (6%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A +A + I+R + L E+ L F VSR LREA+R++E + +RRG Sbjct 22 KMAHVLAADLRRQILRGALTVDQQLPPEAELMVAFDVSRDTLREALRILEAQSLLDVRRG 81 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERL 131 GG + P A R V + L+ GTT+ DL AR VLEP AA+ + ++RL Sbjct 82 RGGGAVVRRPGLASAGRYVALLLQLRGTTLADLEEARAVLEPPAATRLVAGLGGEALDRL 141 Query 132 RAV---LRAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSA 188 A+ RA G F + + E S N + + IL + V + S Sbjct 142 VALHDAARASVGDPLGFATAVTIFDQAVIELSGNRSVAVIAGILRVIYAGQVFLAIEASD 201 Query 189 GEAVE-AAGQVHNEHSDIVAA------VTAGDSAWAKTLSERHVEAVAGWLQQHQRGNDA 241 + E A +V + H + +AA V AGD AW +V AG L RG + Sbjct 202 RASAELIARRVVDAHEEFLAAARRRDPVAAGD-AWTG-----YVLGTAGLLVPPGRGGER 255 Query 242 AV------RNGGRAREPRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETA 295 G+A A + G+PR ++A ++A+ I IA G + Sbjct 256 IDVVPLWRARAGQAVARADAAGVGDGSPR-RVAAIVASEIRARIAEGRLAEGDRLSSLAD 314 Query 296 LLERYQVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSR 355 L + +SR LREA+R+LE ++ +R G G + P Q + L+ R+ + Sbjct 315 LAVEFGISRPTLREALRILEMESLLEVRAGDRAGPRIWHPSTQVAAQLAGTVLEARQVTL 374 Query 356 ED 357 D Sbjct 375 AD 376 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 43/115 (38%), Positives = 57/115 (50%), Gaps = 0/115 (0%) Query 252 PRRAQQLILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAV 311 PRRA P K+A VLAA + I V E L+ + VSR LREA+ Sbjct 8 PRRATAADTFRPPRKMAHVLAADLRRQILRGALTVDQQLPPEAELMVAFDVSRDTLREAL 67 Query 312 RLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIE 366 R+LE ++ +RRG GGG VV P ++ +AL LQ R + DL R +E Sbjct 68 RILEAQSLLDVRRGRGGGAVVRRPGLASAGRYVALLLQLRGTTLADLEEARAVLE 122 Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust. Identities = 36/111 (33%), Positives = 50/111 (46%), Gaps = 0/111 (0%) Query 14 ASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPN 73 A+ +A I A I G L S + L F +SR LREA+R++E + +R G Sbjct 287 AAIVASEIRARIAEGRLAEGDRLSSLADLAVEFGISRPTLREALRILEMESLLEVRAGDR 346 Query 74 GGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHID 124 G I P+ A + LE T+ D A ++EP LAA ID Sbjct 347 AGPRIWHPSTQVAAQLAGTVLEARQVTLADHFHAVRLVEPAMMKLAATRID 397 >gi|84687298|ref|ZP_01015178.1| transcriptional regulator, GntR family protein [Maritimibacter alkaliphilus HTCC2654] gi|84664731|gb|EAQ11215.1| transcriptional regulator, GntR family protein [Rhodobacterales bacterium HTCC2654] Length=243 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 67/234 (29%), Positives = 115/234 (50%), Gaps = 16/234 (6%) Query 13 RASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGP 72 R +++A I+ IV+ G G L SE L +RF +++ +REA+RL++ + + R GP Sbjct 5 RPAQVAEAIKTFIVKEGLQPGDRLPSEPELIERFGMAKGTIREALRLLDAQGLVKSRTGP 64 Query 73 NGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEP-LAASLAAEHIDEPGIERL 131 GG F+ EP+ A + Y + TI D+ R VLEP L A LA +++ + L Sbjct 65 GGGTFVHEPSPERAEALLANYFYFKDLTISDIYQIRRVLEPELVADLAG-NLNPCVLGEL 123 Query 132 RAVLRAEERWRPGLPPPPE--------QFYRVLAEQSKNPVLQLFIDILMR-LTKRYVQK 182 R +L + P E +F+++LA+QS NP+L I ++ LT V + Sbjct 124 RTILASYS--EPATTDDEERDQHIATLRFHKLLADQSTNPLLSFLIGFMLSILTDITVYR 181 Query 183 SGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQ 236 + + G + + ++ A+ GD A+ + + H++ AG L + Q Sbjct 182 KLYTPINHDLWSRGV--DYQTRLLDALDQGDGKAARAIMKAHMQ-TAGPLMEGQ 232 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/220 (26%), Positives = 99/220 (45%), Gaps = 6/220 (2%) Query 271 LAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGPGGGL 330 +A I I G Q G +E L+ER+ +++ +REA+RLL+ + R GPGGG Sbjct 9 VAEAIKTFIVKEGLQPGDRLPSEPELIERFGMAKGTIREALRLLDAQGLVKSRTGPGGGT 68 Query 331 VVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEP---EVASFLD 387 V P P+ + +A Y ++ + D+ +R +E + VA + + E+ + L Sbjct 69 FVHEPSPERAEALLANYFYFKDLTISDIYQIRRVLEPELVADLAGNLNPCVLGELRTILA 128 Query 388 TLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSSTEQALP 447 + P + D+ R + RFH LA + N +L + ++ + + P Sbjct 129 SYSEPATTD--DEERDQHIATLRFHKLLADQSTNPLLSFLIGFMLSILTDITVYRKLYTP 186 Query 448 TWSDVVAVG-HAHVRILEAIGSGDDSLARCRTRRHLDAAA 486 D+ + G R+L+A+ GD AR + H+ A Sbjct 187 INHDLWSRGVDYQTRLLDALDQGDGKAARAIMKAHMQTAG 226 >gi|158316326|ref|YP_001508834.1| regulatory protein GntR [Frankia sp. EAN1pec] gi|158111731|gb|ABW13928.1| regulatory protein GntR HTH [Frankia sp. EAN1pec] Length=265 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 70/246 (29%), Positives = 114/246 (47%), Gaps = 17/246 (6%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A IA + +VR G +L E+ L ++F VSR LREA R++E + +RRG Sbjct 19 KTAEIIATHLRGQVVRGELRTGQTLPPETQLMEQFGVSRPTLREAFRILEAESLISVRRG 78 Query 72 PNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERL 131 GG + P+ A RAV + L+ GTTI D+ AR+V EP A L A+ ++ I L Sbjct 79 SRGGAQVTTPDLSVAARAVGLQLQIQGTTIDDVYQARMVSEPACARLLAQRREDQDIADL 138 Query 132 RAV---LRAEERWRPGLPPPPE-------QFYRVLAEQSKNPVL----QLFIDILMRLTK 177 V L+AE P P+ +F+ ++ ++S N L + DI+ + Sbjct 139 TEVVEALKAEVAKHGTFVPDPDVWSSLTYRFHELILQRSGNRTLAVQGAVLQDIVATHIR 198 Query 178 RYVQKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQR 237 VQ+ E + +V + ++ + ++ A+ H+EA A +L + Sbjct 199 TRVQRYDENDTPERFQ---RVIRSYERFISLIRNRNADMAERHWRSHMEAAAQYLLKDDL 255 Query 238 GNDAAV 243 N + V Sbjct 256 KNKSVV 261 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 63/243 (26%), Positives = 113/243 (47%), Gaps = 14/243 (5%) Query 258 LILGAPRGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYH 317 +I+ AP K AE++A + + + G ET L+E++ VSR LREA R+LE Sbjct 13 MIVRAP--KTAEIIATHLRGQVVRGELRTGQTLPPETQLMEQFGVSRPTLREAFRILEAE 70 Query 318 AIAHMRRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRR 377 ++ +RRG GG VTTP + + L LQ + + +D+ R E + +RR Sbjct 71 SLISVRRGSRGGAQVTTPDLSVAARAVGLQLQIQGTTIDDVYQARMVSEPACARLLAQRR 130 Query 378 SEPEVASFLDTLGRPRLD-------NPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLI 430 + ++A + + + + P DV ++ +RFH + + +GN L + + Sbjct 131 EDQDIADLTEVVEALKAEVAKHGTFVPDPDVWSSLT--YRFHELILQRSGNRTLAVQGAV 188 Query 431 LVELFRRHLSSTEQAL---PTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAAS 487 L ++ H+ + Q T V ++ R + I + + +A R H++AAA Sbjct 189 LQDIVATHIRTRVQRYDENDTPERFQRVIRSYERFISLIRNRNADMAERHWRSHMEAAAQ 248 Query 488 WWL 490 + L Sbjct 249 YLL 251 >gi|126436720|ref|YP_001072411.1| GntR family transcriptional regulator [Mycobacterium sp. JLS] gi|126236520|gb|ABN99920.1| transcriptional regulator, GntR family [Mycobacterium sp. JLS] Length=246 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 70/228 (31%), Positives = 111/228 (49%), Gaps = 16/228 (7%) Query 10 TDKRASKIARRIEADIVRRGW-----PIGASLGSESALQQRFCVSRSVLREAVRLVEHHQ 64 T R K+A R+ A ++RR + G L ES L +RF VSR LREA R++E Sbjct 4 TSLREPKMADRV-ATVLRRMFIRGEITEGTMLPPESELMERFGVSRPTLREAFRVLESES 62 Query 65 VARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLE-PLAASLAAEHI 123 + +++RG GG + P R + LEY G T+ D+ AR+ LE P+ LA + Sbjct 63 LIQVQRGVRGGARVTRPRRETLARYAGLILEYEGVTVKDVYDARVTLEVPMVEQLAKDR- 121 Query 124 DEPGIERLRAVLRAEERWRPGLPPPPE--QFYRVLAEQSKNPVLQLFIDILMRLTK---R 178 + I L ++ E + PG + F+ +A S N LQ+ D+L + + R Sbjct 122 NPKVIAELEEIVEREAQLNPGSEAVDQLTDFHAAIARLSGNSTLQIVSDMLHHIIEKANR 181 Query 179 YVQKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVE 226 +Q + A +AV + + H D+ + AGD+ A L +RH++ Sbjct 182 SLQPTKGARAEQAVRRSAKTHRMVLDM---IKAGDAEKAGDLWKRHLQ 226 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/208 (30%), Positives = 102/208 (50%), Gaps = 9/208 (4%) Query 287 GSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIAL 346 G++ E+ L+ER+ VSR LREA R+LE ++ ++RG GG VT P+ + L Sbjct 31 GTMLPPESELMERFGVSRPTLREAFRVLESESLIQVQRGVRGGARVTRPRRETLARYAGL 90 Query 347 YLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAV 406 L+Y + +D+ R +E+ V ++ K R+ +A + + R NP + AV Sbjct 91 ILEYEGVTVKDVYDARVTLEVPMVEQLAKDRNPKVIAELEEIVEREAQLNPGSE----AV 146 Query 407 EEFR-FHVGLARAAGNTMLDL---FLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRI 462 ++ FH +AR +GN+ L + L ++E R L T+ A + V H + Sbjct 147 DQLTDFHAAIARLSGNSTLQIVSDMLHHIIEKANRSLQPTKGARAEQA-VRRSAKTHRMV 205 Query 463 LEAIGSGDDSLARCRTRRHLDAAASWWL 490 L+ I +GD A +RHL A + L Sbjct 206 LDMIKAGDAEKAGDLWKRHLQKAEEFVL 233 >gi|85375817|ref|YP_459879.1| regulatory protein GntR, HTH [Erythrobacter litoralis HTCC2594] gi|84788900|gb|ABC65082.1| regulatory protein GntR, HTH [Erythrobacter litoralis HTCC2594] Length=242 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 68/230 (30%), Positives = 104/230 (46%), Gaps = 16/230 (6%) Query 264 RGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMR 323 + K A LA +I DI A G E +L RY+V+RA LREA+R LE + H++ Sbjct 6 KAKRALSLAQSIVRDIEAGRHNPGDRLPREDEMLARYEVARATLREALRFLELQGVIHLQ 65 Query 324 RGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVA 383 G GGG VV PQ +++L L + + L +R+AI D +R + +++ Sbjct 66 LGRGGGPVVARPQTGDFASSLSLILHFMEADLRGLLELREAIAPDVAGYAAQRATTADLS 125 Query 384 SFLDTLGRPRLDNPTDDVRAAAVEEF--RFHVGLARAAGNTMLDLF---LLILVELFRRH 438 + L R +D EE RFH L A+GN + L + +L F Sbjct 126 ALAGCLAELRHHEASDQ-----FEELNRRFHDLLGWASGNPLFGLLTSAMHLLTREFSHS 180 Query 439 LSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAASW 488 L + Q + VR+LEA+ +GD + AR R + +A + Sbjct 181 LGYSAQERAVQMKFL------VRVLEAVRTGDSAAARQAMSRLVAGSAVY 224 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 64/231 (28%), Positives = 98/231 (43%), Gaps = 9/231 (3%) Query 7 AVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVA 66 AV KRA +A+ I DI G L E + R+ V+R+ LREA+R +E V Sbjct 3 AVKKAKRALSLAQSIVRDIEAGRHNPGDRLPREDEMLARYEVARATLREALRFLELQGVI 62 Query 67 RMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEP 126 ++ G GG + P G ++ + L ++ + LL R + P A AA+ Sbjct 63 HLQLGRGGGPVVARPQTGDFASSLSLILHFMEADLRGLLELREAIAPDVAGYAAQRATTA 122 Query 127 GIERLRAVLRAEERWRPGLPPPPE---QFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKS 183 + L L AE R E +F+ +L S NP+ L + LT+ + Sbjct 123 DLSALAGCL-AELRHHEASDQFEELNRRFHDLLGWASGNPLFGLLTSAMHLLTREFSHSL 181 Query 184 GTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQ 234 G + AV+ V ++ AV GDSA A+ R V A +L + Sbjct 182 GYSAQERAVQMKFLVR-----VLEAVRTGDSAAARQAMSRLVAGSAVYLSE 227 >gi|149186617|ref|ZP_01864929.1| regulatory protein GntR, HTH [Erythrobacter sp. SD-21] gi|148829844|gb|EDL48283.1| regulatory protein GntR, HTH [Erythrobacter sp. SD-21] Length=242 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 68/230 (30%), Positives = 104/230 (46%), Gaps = 16/230 (6%) Query 264 RGKLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMR 323 + K A LA +I DI A G E +L RY+V+RA LREA+R LE + H++ Sbjct 6 KAKRALSLAQSIVRDIEAGRHNPGDRLPREDEMLARYEVARATLREALRFLELQGVIHLQ 65 Query 324 RGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVA 383 G GGG VV PQ +++L L + + L +R+AI D +R + +++ Sbjct 66 LGRGGGPVVARPQTGDFASSLSLILHFMEADLRGLLELREAIAPDVAGYAAQRATTADLS 125 Query 384 SFLDTLGRPRLDNPTDDVRAAAVEEF--RFHVGLARAAGNTMLDLF---LLILVELFRRH 438 + L R +D EE RFH L A+GN + L + +L F Sbjct 126 ALAGCLAELRHHEASDQ-----FEELNRRFHDLLGWASGNPLFGLLTSAMHLLTREFSHS 180 Query 439 LSSTEQALPTWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLDAAASW 488 L + Q + VR+LEA+ +GD + AR R + +A + Sbjct 181 LGYSAQERAVQMKFL------VRVLEAVRTGDSAAARQAMSRLVAGSAVY 224 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 64/231 (28%), Positives = 98/231 (43%), Gaps = 9/231 (3%) Query 7 AVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVA 66 AV KRA +A+ I DI G L E + R+ V+R+ LREA+R +E V Sbjct 3 AVKKAKRALSLAQSIVRDIEAGRHNPGDRLPREDEMLARYEVARATLREALRFLELQGVI 62 Query 67 RMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEP 126 ++ G GG + P G ++ + L ++ + LL R + P A AA+ Sbjct 63 HLQLGRGGGPVVARPQTGDFASSLSLILHFMEADLRGLLELREAIAPDVAGYAAQRATTA 122 Query 127 GIERLRAVLRAEERWRPGLPPPPE---QFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKS 183 + L L AE R E +F+ +L S NP+ L + LT+ + Sbjct 123 DLSALAGCL-AELRHHEASDQFEELNRRFHDLLGWASGNPLFGLLTSAMHLLTREFSHSL 181 Query 184 GTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQ 234 G + AV+ V ++ AV GDSA A+ R V A +L + Sbjct 182 GYSAQERAVQMKFLVR-----VLEAVRTGDSAAARQAMSRLVAGSAVYLSE 227 >gi|333992397|ref|YP_004525011.1| FadR family transcriptional regulator [Mycobacterium sp. JDM601] gi|333488365|gb|AEF37757.1| FadR family transcriptional regulator [Mycobacterium sp. JDM601] Length=236 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 66/233 (29%), Positives = 106/233 (46%), Gaps = 13/233 (5%) Query 17 IARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPNGGL 76 +A I I+ + G L +E+ L ++ VSR VLREA+R+++ + +RRG GG Sbjct 2 VADNIRRKIILGEFHDGDFLPNEAQLLAQYGVSRPVLREAIRILQSESLLTIRRGSKGGA 61 Query 77 FICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRAVLR 136 + P P R L+Y TT+ D+ AR ++EP A L AE+ ++RL+ L+ Sbjct 62 RVNAPRPEPVARQAGGLLQYGRTTVFDVFRARSIIEPPAVRLLAENATPSTVQRLKEALQ 121 Query 137 AEE-------RWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKRYVQKSGTQSAG 189 E RW F+ ++ E S + L LF I+ +T + Q + Sbjct 122 LESESITDARRW----GKIHADFHTLVVELSGSNTLALFAHIMSGITTAHTQAVWQHATD 177 Query 190 EAVEAAGQ--VHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGND 240 +A + H H +V V G +A A+ L RH+E + +Q D Sbjct 178 DAQKRTDSELAHRVHRKLVRLVEEGKAADAEALWRRHLEETTEKMLSNQGQRD 230 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 56/218 (26%), Positives = 92/218 (43%), Gaps = 6/218 (2%) Query 270 VLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGPGGG 329 ++A I I + G E LL +Y VSR VLREA+R+L+ ++ +RRG GG Sbjct 1 MVADNIRRKIILGEFHDGDFLPNEAQLLAQYGVSRPVLREAIRILQSESLLTIRRGSKGG 60 Query 330 LVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASFLDTL 389 V P+P+ LQY + + D+ R IE V +++ + P L Sbjct 61 ARVNAPRPEPVARQAGGLLQYGRTTVFDVFRARSIIEPPAV-RLLAENATPSTVQRLKEA 119 Query 390 GRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSSTEQALP-- 447 + ++ TD R + FH + +G+ L LF I+ + H + Q Sbjct 120 LQLESESITDARRWGKIHA-DFHTLVVELSGSNTLALFAHIMSGITTAHTQAVWQHATDD 178 Query 448 --TWSDVVAVGHAHVRILEAIGSGDDSLARCRTRRHLD 483 +D H +++ + G + A RRHL+ Sbjct 179 AQKRTDSELAHRVHRKLVRLVEEGKAADAEALWRRHLE 216 >gi|111222879|ref|YP_713673.1| GntR family transcriptional regulator [Frankia alni ACN14a] gi|111150411|emb|CAJ62109.1| Putative GntR-family transcriptional regulator [Frankia alni ACN14a] Length=255 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 79/245 (33%), Positives = 117/245 (48%), Gaps = 9/245 (3%) Query 14 ASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPN 73 A +A + IVR G +L E+ L ++ VSR LREA+R++E + +RRG Sbjct 2 AELVASDLRQAIVRNTLAEGQALPPEAVLMGQYGVSRPTLREALRILEAESLITVRRGAG 61 Query 74 GGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRA 133 GG + PN A R + LE+ TTI D+ ARL+LEP A+ A + LRA Sbjct 62 GGARVQSPNPAVAARYAGLVLEHRATTIADVWDARLLLEPPTAAALARRRTRADLRALRA 121 Query 134 VL----RAEERWRPGLPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKR--YVQKSGTQS 187 +L A ER + G+ E F+ ++ + N L L I +L + R + + Sbjct 122 LLAEHDAATERVQ-GVRLHNE-FHTLVVRLAGNETLALLITLLGEIINRTTWTRVEADLG 179 Query 188 AGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRGNDAAVRNGG 247 E A H+ +V V AGD+ A+ L RH+ A A +L Q R ++A + G Sbjct 180 TPELARAERGTVRVHAMLVDLVEAGDATGAQDLWRRHLAAGARYLGQGGR-DEATLDLLG 238 Query 248 RAREP 252 R EP Sbjct 239 RPGEP 243 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/235 (28%), Positives = 107/235 (46%), Gaps = 25/235 (10%) Query 267 LAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGP 326 +AE++A+ + I + G E L+ +Y VSR LREA+R+LE ++ +RRG Sbjct 1 MAELVASDLRQAIVRNTLAEGQALPPEAVLMGQYGVSRPTLREALRILEAESLITVRRGA 60 Query 327 GGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASFL 386 GGG V +P P + L L++R + D+ R +E A + +RR+ ++ + Sbjct 61 GGGARVQSPNPAVAARYAGLVLEHRATTIADVWDARLLLEPPTAAALARRRTRADLRALR 120 Query 387 DTLGRPRLDNPTDDVRAAAVEEFRFHVGLARAAGNTMLDLFLLILVELFRRHLSSTEQAL 446 L D T+ V+ + FH + R AGN L L + +L E+ R Sbjct 121 ALLAEH--DAATERVQGVRLHN-EFHTLVVRLAGNETLALLITLLGEIINR--------- 168 Query 447 PTWSDVVA-------------VGHAHVRILEAIGSGDDSLARCRTRRHLDAAASW 488 TW+ V A H +++ + +GD + A+ RRHL A A + Sbjct 169 TTWTRVEADLGTPELARAERGTVRVHAMLVDLVEAGDATGAQDLWRRHLAAGARY 223 >gi|118467208|ref|YP_881752.1| GntR family transcriptional regulator [Mycobacterium avium 104] gi|118168495|gb|ABK69392.1| regulatory protein GntR, HTH [Mycobacterium avium 104] Length=246 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/234 (30%), Positives = 112/234 (48%), Gaps = 16/234 (6%) Query 10 TDKRASKIARRIEADIVRRGW-----PIGASLGSESALQQRFCVSRSVLREAVRLVEHHQ 64 T R K+A R+ A ++RR + G L ES L +RF VSR LREA R++E Sbjct 4 TSLREPKMADRV-ATVLRRMFIRGEITEGTMLPPESELMERFGVSRPTLREAFRVLESES 62 Query 65 VARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLE-PLAASLAAEHI 123 + +++RG GG + P R + LEY G T+ D+ AR+ LE P+ LA + Sbjct 63 LIQVQRGVRGGARVTRPRRETLARYAGLILEYEGVTVKDVYDARVTLEVPMVEQLAKDR- 121 Query 124 DEPGIERLRAVLRAEERWRPGLPPPPE--QFYRVLAEQSKNPVLQLFIDILMRLTK---R 178 + I L ++ E + PG + F+ +A S N LQ+ D+L + + R Sbjct 122 NPKVIAELEQIVERESQLNPGSEAVDQLTDFHAAIARLSGNSTLQIVSDMLHHIIEKANR 181 Query 179 YVQKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWL 232 +Q + A +AV + + H D++ GD+ A L +RH++ ++ Sbjct 182 SLQPTKGTRAEQAVRRSAKTHRMVLDMIK---EGDAEKAGELWKRHLQKAEEFV 232 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/213 (31%), Positives = 100/213 (47%), Gaps = 19/213 (8%) Query 287 GSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASIDTIAL 346 G++ E+ L+ER+ VSR LREA R+LE ++ ++RG GG VT P+ + L Sbjct 31 GTMLPPESELMERFGVSRPTLREAFRVLESESLIQVQRGVRGGARVTRPRRETLARYAGL 90 Query 347 YLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASFLDTLGRPRLDNPTDDVRAAAV 406 L+Y + +D+ R +E+ V ++ K R+ +A + R NP + AV Sbjct 91 ILEYEGVTVKDVYDARVTLEVPMVEQLAKDRNPKVIAELEQIVERESQLNPGSE----AV 146 Query 407 EEFR-FHVGLARAAGNTMLDL---FLLILVELFRRHLSST-----EQALPTWSDVVAVGH 457 ++ FH +AR +GN+ L + L ++E R L T EQA V Sbjct 147 DQLTDFHAAIARLSGNSTLQIVSDMLHHIIEKANRSLQPTKGTRAEQA------VRRSAK 200 Query 458 AHVRILEAIGSGDDSLARCRTRRHLDAAASWWL 490 H +L+ I GD A +RHL A + L Sbjct 201 THRMVLDMIKEGDAEKAGELWKRHLQKAEEFVL 233 >gi|323528669|ref|YP_004230821.1| regulatory protein GntR HTH [Burkholderia sp. CCGE1001] gi|323385671|gb|ADX57761.1| regulatory protein GntR HTH [Burkholderia sp. CCGE1001] Length=419 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/71 (55%), Positives = 48/71 (68%), Gaps = 0/71 (0%) Query 12 KRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRG 71 K A IA +IE D++ R WP G GSE+ L+ RF V R V+REAVR++E ARMRRG Sbjct 41 KAACIIAAQIEEDLIGRSWPTGTIYGSEAHLETRFGVCRVVVREAVRILESRGTARMRRG 100 Query 72 PNGGLFICEPN 82 PNGGL I P+ Sbjct 101 PNGGLLILAPS 111 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/83 (40%), Positives = 50/83 (61%), Gaps = 0/83 (0%) Query 266 KLAEVLAATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRG 325 K A ++AA I +D+ W G+++G+E L R+ V R V+REAVR+LE A MRRG Sbjct 41 KAACIIAAQIEEDLIGRSWPTGTIYGSEAHLETRFGVCRVVVREAVRILESRGTARMRRG 100 Query 326 PGGGLVVTTPQPQASIDTIALYL 348 P GGL++ P ++ + Y+ Sbjct 101 PNGGLLILAPSMPIVLEALDRYV 123 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/106 (30%), Positives = 52/106 (50%), Gaps = 0/106 (0%) Query 282 SGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHMRRGPGGGLVVTTPQPQASI 341 S ++ G+E L +RY R VLR+AVR+LE+ IA G G GL+ TP+P A Sbjct 209 SSHEIDRRLGSELDLCDRYGADRDVLRQAVRVLEFEGIAESVAGRGKGLMTRTPEPAALC 268 Query 342 DTIALYLQYRKPSREDLRCVRDAIEIDNVAKVVKRRSEPEVASFLD 387 I Y + + D + + ++ ++ + ++ E+A D Sbjct 269 RLINCYFTAARVTPSDAMSLFKLLSVEAISIAAEEATDGELARLKD 314 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/145 (31%), Positives = 64/145 (45%), Gaps = 5/145 (3%) Query 36 LGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPNGGLFICEPNAGPATRAVVIYLE 95 LGSE L R+ R VLR+AVR++E +A G GL P R + Y Sbjct 217 LGSELDLCDRYGADRDVLRQAVRVLEFEGIAESVAGRGKGLMTRTPEPAALCRLINCYFT 276 Query 96 YLGTTIGDLLGARLVLEPLAASLAAEHIDEPGIERLRAVLRAEERWRPGLPPPPEQFYRV 155 T D + +L A S+AAE + + RL+ V +R P Sbjct 277 AARVTPSDAMSLFKLLSVEAISIAAEEATDGELARLKDV----QRLLHAADVPVTAKVMQ 332 Query 156 LAEQSKNPVL-QLFIDILMRLTKRY 179 AE+S+ ++ + +DIL+R TK Y Sbjct 333 EAEESQFGIIDEPLVDILLRCTKSY 357 >gi|343926541|ref|ZP_08766045.1| putative GntR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] gi|343763544|dbj|GAA12971.1| putative GntR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] Length=260 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/248 (29%), Positives = 116/248 (47%), Gaps = 15/248 (6%) Query 2 STEPDAVWTDKRASKIARRIEADIVRRGWPIGASLGSESALQQRFCVSRSVLREAVRLVE 61 +T A+ + K A +AR + IV G L E+ L F VSR LREAVR++E Sbjct 14 ATTSGAIRSPKTAELVARTLRRMIVDGRLKDGDFLPHEADLMAHFQVSRPTLREAVRVLE 73 Query 62 HHQVARMRRGPNGGLFICEPNAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAE 121 ++ +RRG G I P R + LE GTT+ +++ AR V+EP AA + AE Sbjct 74 SERLVEVRRGSRTGARIRVPGPEIVARPAGLLLELSGTTVAEVMRAREVIEPAAAEMLAE 133 Query 122 HIDEPGIERLRAVLRAE--ERWRPG-LPPPPEQFYRVLAEQSKNPVLQLFIDILMRLTKR 178 D + L+A++ E E + G + F+R + E S N +++ +L + +R Sbjct 134 TGDTNAFDELQAIIDNELDEAFENGTMAQASVWFHRRIVELSGNSAMEMIAGMLSEIAER 193 Query 179 YVQKSGTQSAGEAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSERHVEAVAGWLQQHQRG 238 ++ + + + + + +V V AGD A EA A W Q+H + Sbjct 194 HIANTIDDDPMPRAQYTKLIRS-YQKLVDLVRAGDGA----------EAAAHW-QRHMKN 241 Query 239 NDAAVRNG 246 ++ A+ G Sbjct 242 SNQALLAG 249 Lambda K H 0.320 0.134 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1047275428216 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40