BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3064c
Length=141
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610201|ref|NP_217580.1| integral membrane protein [Mycobact... 278 1e-73
gi|289553145|ref|ZP_06442355.1| conserved membrane protein [Myco... 275 1e-72
gi|339295899|gb|AEJ48010.1| conserved membrane protein [Mycobact... 246 1e-63
gi|254820753|ref|ZP_05225754.1| putative integral membrane prote... 199 1e-49
gi|296171091|ref|ZP_06852544.1| DoxX family protein [Mycobacteri... 193 6e-48
gi|342860912|ref|ZP_08717561.1| putative conserved integral memb... 184 3e-45
gi|108800288|ref|YP_640485.1| DoxX [Mycobacterium sp. MCS] >gi|1... 142 2e-32
gi|120404562|ref|YP_954391.1| DoxX family protein [Mycobacterium... 135 2e-30
gi|118468165|ref|YP_888569.1| integral membrane protein [Mycobac... 129 2e-28
gi|145223501|ref|YP_001134179.1| DoxX family protein [Mycobacter... 126 8e-28
gi|239987358|ref|ZP_04708022.1| hypothetical protein SrosN1_0864... 123 1e-26
gi|182438952|ref|YP_001826671.1| hypothetical protein SGR_5159 [... 119 1e-25
gi|302545799|ref|ZP_07298141.1| DoxX family protein [Streptomyce... 119 1e-25
gi|345014737|ref|YP_004817091.1| DoxX family protein [Streptomyc... 119 2e-25
gi|169629018|ref|YP_001702667.1| hypothetical protein MAB_1930c ... 117 5e-25
gi|337764662|emb|CCB73371.1| putative integral membrane protein ... 117 8e-25
gi|329934810|ref|ZP_08284851.1| putative integral membrane prote... 116 1e-24
gi|297199339|ref|ZP_06916736.1| integral membrane protein [Strep... 116 1e-24
gi|297160925|gb|ADI10637.1| integral membrane protein [Streptomy... 114 5e-24
gi|291439920|ref|ZP_06579310.1| conserved hypothetical protein [... 113 9e-24
gi|291451100|ref|ZP_06590490.1| integral membrane protein [Strep... 112 2e-23
gi|302562527|ref|ZP_07314869.1| DoxX family protein [Streptomyce... 111 3e-23
gi|302526669|ref|ZP_07279011.1| integral membrane protein [Strep... 111 4e-23
gi|29832367|ref|NP_827001.1| hypothetical protein SAV_5824 [Stre... 110 8e-23
gi|169629019|ref|YP_001702668.1| hypothetical protein MAB_1931c ... 108 2e-22
gi|295837913|ref|ZP_06824846.1| DoxX family protein [Streptomyce... 106 1e-21
gi|291441770|ref|ZP_06581160.1| integral membrane protein [Strep... 106 1e-21
gi|320011039|gb|ADW05889.1| DoxX family protein [Streptomyces fl... 105 3e-21
gi|290957231|ref|YP_003488413.1| transmembrane DoxD family prote... 104 4e-21
gi|302560856|ref|ZP_07313198.1| DoxX family protein [Streptomyce... 103 7e-21
gi|110633288|ref|YP_673496.1| DoxX [Mesorhizobium sp. BNC1] >gi|... 103 9e-21
gi|72160508|ref|YP_288165.1| integral membrane protein [Thermobi... 103 1e-20
gi|302551086|ref|ZP_07303428.1| integral membrane protein [Strep... 103 1e-20
gi|294629112|ref|ZP_06707672.1| integral membrane protein [Strep... 101 4e-20
gi|290960817|ref|YP_003491999.1| protein [Streptomyces scabiei 8... 101 4e-20
gi|296268373|ref|YP_003651005.1| DoxX family protein [Thermobisp... 101 4e-20
gi|262200130|ref|YP_003271338.1| DoxX family protein [Gordonia b... 100 7e-20
gi|344999429|ref|YP_004802283.1| DoxX family protein [Streptomyc... 100 1e-19
gi|222149083|ref|YP_002550040.1| hypothetical protein Avi_2820 [... 99.8 1e-19
gi|226359730|ref|YP_002777508.1| hypothetical protein ROP_03160 ... 99.8 1e-19
gi|302870202|ref|YP_003838839.1| DoxX family protein [Micromonos... 98.6 3e-19
gi|116252308|ref|YP_768146.1| transmembrane DoxD family protein ... 98.6 3e-19
gi|327191037|gb|EGE58090.1| hypothetical conserved membrane prot... 98.6 3e-19
gi|163849878|ref|YP_001637921.1| DoxX family protein [Methylobac... 98.2 3e-19
gi|190891930|ref|YP_001978472.1| hypothetical protein [Rhizobium... 97.8 5e-19
gi|218528510|ref|YP_002419326.1| DoxX family protein [Methylobac... 97.4 6e-19
gi|298293956|ref|YP_003695895.1| DoxX family protein [Starkeya n... 97.4 6e-19
gi|238061354|ref|ZP_04606063.1| integral membrane protein [Micro... 97.1 8e-19
gi|328882105|emb|CCA55344.1| putative integral membrane protein ... 96.7 1e-18
gi|325293692|ref|YP_004279556.1| hypothetical protein AGROH133_0... 96.7 1e-18
>gi|15610201|ref|NP_217580.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15842633|ref|NP_337670.1| hypothetical protein MT3150 [Mycobacterium tuberculosis CDC1551]
gi|31794243|ref|NP_856736.1| integral membrane protein [Mycobacterium bovis AF2122/97]
74 more sequence titles
Length=141
Score = 278 bits (712), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/141 (100%), Positives = 141/141 (100%), Gaps = 0/141 (0%)
Query 1 MVKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVI 60
MVKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVI
Sbjct 1 MVKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVI 60
Query 61 ELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGF 120
ELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGF
Sbjct 61 ELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGF 120
Query 121 FLLVFTGGGIYSIDARRTVTA 141
FLLVFTGGGIYSIDARRTVTA
Sbjct 121 FLLVFTGGGIYSIDARRTVTA 141
>gi|289553145|ref|ZP_06442355.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|289437777|gb|EFD20270.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
Length=140
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/140 (99%), Positives = 140/140 (100%), Gaps = 0/140 (0%)
Query 2 VKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIE 61
+KDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIE
Sbjct 1 MKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIE 60
Query 62 LVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFF 121
LVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFF
Sbjct 61 LVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFF 120
Query 122 LLVFTGGGIYSIDARRTVTA 141
LLVFTGGGIYSIDARRTVTA
Sbjct 121 LLVFTGGGIYSIDARRTVTA 140
>gi|339295899|gb|AEJ48010.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5079]
gi|339299512|gb|AEJ51622.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5180]
Length=126
Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/126 (99%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 16 VLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELVAGLLIATGLFTR 75
+LSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELVAGLLIATGLFTR
Sbjct 1 MLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELVAGLLIATGLFTR 60
Query 76 AVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTGGGIYSIDA 135
AVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTGGGIYSIDA
Sbjct 61 AVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTGGGIYSIDA 120
Query 136 RRTVTA 141
RRTVTA
Sbjct 121 RRTVTA 126
>gi|254820753|ref|ZP_05225754.1| putative integral membrane protein [Mycobacterium intracellulare
ATCC 13950]
Length=149
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/135 (75%), Positives = 109/135 (81%), Gaps = 0/135 (0%)
Query 1 MVKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVI 60
+ K LDRRLA PAVLS FRLVYGLLFA YGS LF WPV S VEFGSWPGWYAG+I
Sbjct 4 VTKGLDRRLARHAPAVLSAFRLVYGLLFAAYGSRSLFDWPVRSPVVVEFGSWPGWYAGLI 63
Query 61 ELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGF 120
E+VAGLL+A GLFTR AF+ASGEMAVAYFWMHQP ALWP+ PP GNGG +ILFCF F
Sbjct 64 EIVAGLLVAAGLFTRTAAFIASGEMAVAYFWMHQPMALWPVADPPGGNGGALSILFCFAF 123
Query 121 FLLVFTGGGIYSIDA 135
FLLVF GGG YS+DA
Sbjct 124 FLLVFIGGGPYSLDA 138
>gi|296171091|ref|ZP_06852544.1| DoxX family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894347|gb|EFG74100.1| DoxX family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=145
Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/137 (72%), Positives = 108/137 (79%), Gaps = 0/137 (0%)
Query 1 MVKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVI 60
M KD DRRL P LS+FR VYGLLFA YGS LF +PV S +EFGSWPGWYAG+I
Sbjct 1 MTKDWDRRLGRHAPTALSVFRCVYGLLFAAYGSRSLFDFPVASPVRIEFGSWPGWYAGLI 60
Query 61 ELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGF 120
E++AGLLIA+GL TRAVAFVASG+MAVAYFW+HQP A WP+ PP GNGG AILFCF F
Sbjct 61 EVIAGLLIASGLCTRAVAFVASGQMAVAYFWIHQPQAFWPVADPPAGNGGALAILFCFAF 120
Query 121 FLLVFTGGGIYSIDARR 137
LLVFTGGG YSIDA R
Sbjct 121 LLLVFTGGGSYSIDALR 137
>gi|342860912|ref|ZP_08717561.1| putative conserved integral membrane protein [Mycobacterium colombiense
CECT 3035]
gi|342131356|gb|EGT84626.1| putative conserved integral membrane protein [Mycobacterium colombiense
CECT 3035]
Length=141
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/137 (71%), Positives = 107/137 (79%), Gaps = 0/137 (0%)
Query 2 VKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIE 61
+ LD+RLA PAVL LFR VYG+LFA YGS LF WPV S + FG P WYAG+IE
Sbjct 1 MNGLDQRLARYAPAVLGLFRCVYGVLFAAYGSRSLFDWPVRSPVHIGFGVSPEWYAGLIE 60
Query 62 LVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFF 121
+VAGLLIA GLFTRAVAFVASGEMAVAYF +HQP ALWP+G PP GNGG AILFCF FF
Sbjct 61 IVAGLLIAGGLFTRAVAFVASGEMAVAYFSIHQPKALWPVGDPPAGNGGALAILFCFAFF 120
Query 122 LLVFTGGGIYSIDARRT 138
LLVF+GGG YS+DA R
Sbjct 121 LLVFSGGGAYSLDALRR 137
>gi|108800288|ref|YP_640485.1| DoxX [Mycobacterium sp. MCS]
gi|119869416|ref|YP_939368.1| DoxX family protein [Mycobacterium sp. KMS]
gi|126435911|ref|YP_001071602.1| DoxX family protein [Mycobacterium sp. JLS]
gi|108770707|gb|ABG09429.1| DoxX [Mycobacterium sp. MCS]
gi|119695505|gb|ABL92578.1| DoxX family protein [Mycobacterium sp. KMS]
gi|126235711|gb|ABN99111.1| DoxX family protein [Mycobacterium sp. JLS]
Length=180
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/137 (54%), Positives = 90/137 (66%), Gaps = 2/137 (1%)
Query 1 MVKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVI 60
M + D RLA +LS+FR+++GL F +GSM LFGWP+ + PV G+WP W+AG+I
Sbjct 1 MATNFDARLANYSSPLLSIFRIIFGLAFTLHGSMKLFGWPLGESVPV--GTWPFWWAGLI 58
Query 61 ELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGF 120
E V G+LI GLFTR AF+ASGEMAVAY W H P WP GNGG PA+L+CF F
Sbjct 59 EFVLGILITVGLFTRIAAFIASGEMAVAYLWQHLPNGFWPYDPGVGGNGGEPALLYCFAF 118
Query 121 FLLVFTGGGIYSIDARR 137
L G G S+DARR
Sbjct 119 LALAGLGAGTLSVDARR 135
>gi|120404562|ref|YP_954391.1| DoxX family protein [Mycobacterium vanbaalenii PYR-1]
gi|119957380|gb|ABM14385.1| DoxX family protein [Mycobacterium vanbaalenii PYR-1]
Length=148
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/145 (53%), Positives = 94/145 (65%), Gaps = 13/145 (8%)
Query 1 MVKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPV-TSAQPVEF-------GSW 52
M +LD RL VLS+FR+V+GLLF +G+ + WP A P +F G+W
Sbjct 1 MTTNLDARLTSYSAPVLSIFRIVFGLLFTLHGAQKVLAWPTGMQAGPGDFTGPAVPVGTW 60
Query 53 PGWYAGVIELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTP 112
P W+AG++E+V GLLI GLFTR AF+A+G+MAVAYFW H P A +PI NGG P
Sbjct 61 PYWWAGLLEIVLGLLITVGLFTRIAAFIAAGQMAVAYFWQHLPKAFFPI-----ENGGEP 115
Query 113 AILFCFGFFLLVFTGGGIYSIDARR 137
AILFCFGF LLV G G +SIDA R
Sbjct 116 AILFCFGFLLLVAMGAGAWSIDALR 140
>gi|118468165|ref|YP_888569.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118169452|gb|ABK70348.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=136
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/138 (58%), Positives = 94/138 (69%), Gaps = 6/138 (4%)
Query 1 MVKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQ-PVEFGSWPGWYAGV 59
M +LD RLA P V+++FR+V+G LFA +G+ LF WPV S V G+WP WYAGV
Sbjct 1 MTTNLDTRLATYSPVVVAIFRIVFGFLFAVHGASKLFAWPVDSGSGAVPVGTWPYWYAGV 60
Query 60 IELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFG 119
IELV GLLI GLFTR AF+ASG MAVAYFW HQP L P+ NGG P +LFCFG
Sbjct 61 IELVLGLLIMVGLFTRIAAFIASGHMAVAYFWQHQPKGLLPL-----ENGGEPTVLFCFG 115
Query 120 FFLLVFTGGGIYSIDARR 137
F LL GGG +++DA R
Sbjct 116 FLLLFAIGGGAFALDAAR 133
>gi|145223501|ref|YP_001134179.1| DoxX family protein [Mycobacterium gilvum PYR-GCK]
gi|315443860|ref|YP_004076739.1| hypothetical protein Mspyr1_22580 [Mycobacterium sp. Spyr1]
gi|145215987|gb|ABP45391.1| DoxX family protein [Mycobacterium gilvum PYR-GCK]
gi|315262163|gb|ADT98904.1| predicted membrane protein [Mycobacterium sp. Spyr1]
Length=185
Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/144 (51%), Positives = 97/144 (68%), Gaps = 8/144 (5%)
Query 2 VKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIE 61
+ D RLA +LS+FR+++G+LF +G+M LFGWP+ +A PV G+WP W+AG+IE
Sbjct 1 MTTFDARLASYSSPMLSIFRIMFGVLFTLHGTMKLFGWPLGAAVPV--GTWPYWFAGLIE 58
Query 62 LVAGLLIATGLFTRAVAFVASGEMAVAYFWMH------QPYALWPIGGPPDGNGGTPAIL 115
+V G+LI G FTR AF+A+G MAVAYFW H +P + WP+GG GNGG AIL
Sbjct 59 VVCGILITVGFFTRIAAFIAAGHMAVAYFWQHWGIIGGEPKSFWPLGGDAGGNGGELAIL 118
Query 116 FCFGFFLLVFTGGGIYSIDARRTV 139
+CF F LL G G +S+D RR V
Sbjct 119 YCFAFLLLATLGAGAWSVDGRRQV 142
>gi|239987358|ref|ZP_04708022.1| hypothetical protein SrosN1_08642 [Streptomyces roseosporus NRRL
11379]
gi|291444314|ref|ZP_06583704.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
gi|291347261|gb|EFE74165.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
Length=149
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/127 (56%), Positives = 84/127 (67%), Gaps = 7/127 (5%)
Query 8 RLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELVAGLL 67
RL P VLSLFRLV GLLFA +G+ LFG V E G+WPGWYA +I+LV G L
Sbjct 4 RLNQAQPYVLSLFRLVVGLLFAFHGAATLFG--VLGGNQAETGAWPGWYAALIQLVCGSL 61
Query 68 IATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTG 127
+A GL TRA AF+ASG MA AYF +HQP A P+ NGG P+ +FC+ F LLVFTG
Sbjct 62 VALGLGTRAAAFLASGSMAYAYFKVHQPEAFLPL-----QNGGEPSAMFCWAFLLLVFTG 116
Query 128 GGIYSID 134
G ++D
Sbjct 117 PGAVALD 123
>gi|182438952|ref|YP_001826671.1| hypothetical protein SGR_5159 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326779606|ref|ZP_08238871.1| DoxX family protein [Streptomyces cf. griseus XylebKG-1]
gi|178467468|dbj|BAG21988.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326659939|gb|EGE44785.1| DoxX family protein [Streptomyces griseus XylebKG-1]
Length=149
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/127 (56%), Positives = 83/127 (66%), Gaps = 7/127 (5%)
Query 8 RLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELVAGLL 67
RL P VLSLFR V GLLFA +G+ LFG V E G+WPGWYA +I+LV G L
Sbjct 4 RLNQAQPYVLSLFRFVVGLLFAFHGAATLFG--VLGGNQAETGAWPGWYAALIQLVCGSL 61
Query 68 IATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTG 127
+A GL TRA AF+ASG MA AYF +HQP AL P+ NGG A +FC+ F LLVFTG
Sbjct 62 VALGLGTRAAAFLASGSMAYAYFKVHQPEALLPL-----QNGGEGAAMFCWAFLLLVFTG 116
Query 128 GGIYSID 134
G ++D
Sbjct 117 PGSIALD 123
>gi|302545799|ref|ZP_07298141.1| DoxX family protein [Streptomyces hygroscopicus ATCC 53653]
gi|302463417|gb|EFL26510.1| DoxX family protein [Streptomyces himastatinicus ATCC 53653]
Length=159
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/135 (50%), Positives = 86/135 (64%), Gaps = 8/135 (5%)
Query 3 KDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGW---PVTSAQPVEFGSWPGWYAGV 59
+ LD L P VLSLFR+V GLLF +G+ L GW + + + VE G+WPGWYA V
Sbjct 8 RSLDGLLETGRPYVLSLFRIVVGLLFFCHGASSLLGWMGGAMGTGKTVEAGTWPGWYAAV 67
Query 60 IELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFG 119
I+LV G L+ GL TR AF+ SG MA AYF HQP LWP+ NGG + +FC+
Sbjct 68 IQLVGGALVMLGLGTRIAAFICSGSMAYAYFHEHQPEKLWPL-----QNGGEASAMFCWA 122
Query 120 FFLLVFTGGGIYSID 134
FFL+VFTG G +++D
Sbjct 123 FFLIVFTGPGPWALD 137
>gi|345014737|ref|YP_004817091.1| DoxX family protein [Streptomyces violaceusniger Tu 4113]
gi|344041086|gb|AEM86811.1| DoxX family protein [Streptomyces violaceusniger Tu 4113]
Length=160
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/135 (49%), Positives = 86/135 (64%), Gaps = 8/135 (5%)
Query 3 KDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGW---PVTSAQPVEFGSWPGWYAGV 59
+ L L P VLSLFR+V GLLF +G+ L GW + + + +E G+WPGWYA V
Sbjct 8 RTLGEALDSARPYVLSLFRIVVGLLFFCHGASSLLGWFGGMMGTGKTIEAGTWPGWYAAV 67
Query 60 IELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFG 119
I+LV G L+ G+ +R+ AF++SG MA AYF HQP LWPI NGG PA +FC+
Sbjct 68 IQLVGGALVMLGVGSRSAAFISSGSMAYAYFHEHQPEKLWPI-----QNGGEPAAMFCWT 122
Query 120 FFLLVFTGGGIYSID 134
LLVFTG G +++D
Sbjct 123 LLLLVFTGPGPWALD 137
>gi|169629018|ref|YP_001702667.1| hypothetical protein MAB_1930c [Mycobacterium abscessus ATCC
19977]
gi|169240985|emb|CAM62013.1| Conserved hypothetical integral membrane protein [Mycobacterium
abscessus]
Length=140
Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/130 (57%), Positives = 84/130 (65%), Gaps = 9/130 (6%)
Query 8 RLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWP-VTSAQPVEFGSWP-GWYAGVIELVAG 65
+L G P VLSLFR+V+GLLF +G+ ILF WP + S PVE SW GW+AG IE + G
Sbjct 12 KLDGATPIVLSLFRIVFGLLFTIHGTAILFRWPDLASMPPVE--SWSLGWWAGAIEFLTG 69
Query 66 LLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVF 125
+ I G TR AF+ASG MA AYF HQP L PI N G A LFC+GF LLVF
Sbjct 70 VAILFGAGTRIAAFIASGTMAFAYFTQHQPEGLLPI-----ENNGELAALFCWGFLLLVF 124
Query 126 TGGGIYSIDA 135
TGGG SIDA
Sbjct 125 TGGGSLSIDA 134
>gi|337764662|emb|CCB73371.1| putative integral membrane protein [Streptomyces cattleya NRRL
8057]
Length=151
Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/120 (55%), Positives = 80/120 (67%), Gaps = 6/120 (5%)
Query 16 VLSLFRLVYGLLFAGYGSMILFG-WPVTSAQPVEFGSWPGWYAGVIELVAGLLIATGLFT 74
VL L+RLV G+LFA +G+ LFG +P A F WPGW+A +IEL G L+A GLFT
Sbjct 13 VLGLYRLVTGVLFACHGAAGLFGAFPGAQAGQAAFPQWPGWWAALIELAGGALVAVGLFT 72
Query 75 RAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTGGGIYSID 134
R A V+SG MA AYF +HQP+ALWPI N G PA+LFC+ F L+ TG G YS+D
Sbjct 73 RPAALVSSGAMAYAYFSVHQPHALWPI-----ENHGEPAVLFCWAFLLIAVTGPGHYSLD 127
>gi|329934810|ref|ZP_08284851.1| putative integral membrane protein [Streptomyces griseoaurantiacus
M045]
gi|329305632|gb|EGG49488.1| putative integral membrane protein [Streptomyces griseoaurantiacus
M045]
Length=154
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/134 (51%), Positives = 83/134 (62%), Gaps = 9/134 (6%)
Query 5 LDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFG----WPVTSAQPVEFGSWPGWYAGVI 60
+ RL P V+ LFR+V GLLF +G+ LFG T +E G+WPGWYA VI
Sbjct 1 MSGRLNSAQPYVVGLFRIVLGLLFTCHGAASLFGVLGGAQGTDGGTIEAGTWPGWYAAVI 60
Query 61 ELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGF 120
+LV G L+ GL TR AF+ASG MA AYF +HQ +ALWPI NGG A LFC+ F
Sbjct 61 QLVCGALVLLGLATRPAAFLASGSMAFAYFHVHQSHALWPI-----QNGGEQAALFCWTF 115
Query 121 FLLVFTGGGIYSID 134
LLVFTG G ++D
Sbjct 116 LLLVFTGPGALALD 129
>gi|297199339|ref|ZP_06916736.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
gi|197715329|gb|EDY59363.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
Length=149
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/138 (51%), Positives = 85/138 (62%), Gaps = 12/138 (8%)
Query 8 RLAGCLPAVLSLFRLVYGLLFAGYGSMILFGW----PVTSAQPVEFGSWPGWYAGVIELV 63
RL P L L+R+V GLLF +G+ LFG P T VE G+WPGWYA VIELV
Sbjct 4 RLNSAQPYALGLYRIVVGLLFLCHGAASLFGVLGGVPGTHGGTVETGTWPGWYAAVIELV 63
Query 64 AGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLL 123
G L+ GL TR AF+A+G MA AYF +HQP ALWPI NGG A +F + F LL
Sbjct 64 CGSLVLLGLGTRVAAFLAAGSMAYAYFKVHQPTALWPI-----ENGGEAAAMFSWAFLLL 118
Query 124 VFTGGGIYSID---ARRT 138
VFTG G + +D A+R+
Sbjct 119 VFTGSGAFGLDRLFAKRS 136
>gi|297160925|gb|ADI10637.1| integral membrane protein [Streptomyces bingchenggensis BCW-1]
Length=159
Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/147 (50%), Positives = 94/147 (64%), Gaps = 13/147 (8%)
Query 3 KDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGW---PVTSAQPVEFGSWPGWYAGV 59
+ L RL G P VLSLFR+V GLLF +G+ L GW + + + V+ G+WPGWYA V
Sbjct 8 QGLAERLDGTRPYVLSLFRIVVGLLFFCHGASSLLGWFGGLMGTGKTVDAGTWPGWYAAV 67
Query 60 IELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFG 119
I+LV G L+ GL TR+ AF++SG MA AYF HQP LWPI NGG A +FC+
Sbjct 68 IQLVGGGLVLLGLGTRSAAFISSGSMAYAYFHEHQPEKLWPI-----QNGGEAAAMFCWA 122
Query 120 FFLLVFTGGGIYSID-----ARRTVTA 141
F L+VFTG G +++D AR+ VTA
Sbjct 123 FLLIVFTGPGPWALDRFLGSARQAVTA 149
>gi|291439920|ref|ZP_06579310.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291342815|gb|EFE69771.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length=150
Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/137 (50%), Positives = 84/137 (62%), Gaps = 11/137 (8%)
Query 8 RLAGCLPAVLSLFRLVYGLLFAGYGSMILFG---WPVTSAQPVEFGSWPGWYAGVIELVA 64
RL P L FR+V GLLFA +G++ L G + VE G+WP WYA +IELV
Sbjct 4 RLNSAQPYALGAFRMVVGLLFACHGAVALLGVLGGADGNGGTVEAGAWPQWYAALIELVC 63
Query 65 GLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLV 124
G L+ GL TRA AF++SG MA AYF +HQP ALWPI N G A L+C+ FLLV
Sbjct 64 GSLVLLGLGTRAAAFLSSGAMAYAYFKVHQPEALWPI-----DNSGEGAALYCWAMFLLV 118
Query 125 FTGGGIYSID---ARRT 138
FTG G + +D ARR+
Sbjct 119 FTGSGAFGLDRLFARRS 135
>gi|291451100|ref|ZP_06590490.1| integral membrane protein [Streptomyces albus J1074]
gi|291354049|gb|EFE80951.1| integral membrane protein [Streptomyces albus J1074]
Length=149
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 83/132 (63%), Gaps = 7/132 (5%)
Query 5 LDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQ--PVEFGSWPGWYAGVIEL 62
+ RL P L L+R+V GLLFA +G+ LFG + +E G+WPGWYA VI+L
Sbjct 1 MTSRLDSAQPYALGLYRIVIGLLFACHGAASLFGVLGGARGGGTLEAGAWPGWYAAVIQL 60
Query 63 VAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFL 122
V G L+A GL TRA AFV+SG MA AYF +HQP ALWP+ NGG + +FC+ L
Sbjct 61 VGGGLVALGLATRAAAFVSSGSMAYAYFVVHQPEALWPL-----QNGGELSAVFCWALLL 115
Query 123 LVFTGGGIYSID 134
LVFTG G +D
Sbjct 116 LVFTGSGALGLD 127
>gi|302562527|ref|ZP_07314869.1| DoxX family protein [Streptomyces griseoflavus Tu4000]
gi|302480145|gb|EFL43238.1| DoxX family protein [Streptomyces griseoflavus Tu4000]
Length=151
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/131 (52%), Positives = 80/131 (62%), Gaps = 7/131 (5%)
Query 5 LDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELVA 64
L+ RL+ C P VL LFR+V GLLFA G+ LFG A P G WP WYAGVIELV
Sbjct 13 LNDRLSRCQPLVLGLFRIVLGLLFASEGAATLFGVLGREASPA--GDWPFWYAGVIELVC 70
Query 65 GLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLV 124
G L+ G+ TR AF++SG MA AYF HQ L+P+ NGG LFC+GF LLV
Sbjct 71 GALVLLGVVTRGAAFLSSGAMAFAYFTEHQRDGLFPL-----QNGGLSPALFCWGFLLLV 125
Query 125 FTGGGIYSIDA 135
F+G G + A
Sbjct 126 FSGPGALCLPA 136
>gi|302526669|ref|ZP_07279011.1| integral membrane protein [Streptomyces sp. AA4]
gi|302435564|gb|EFL07380.1| integral membrane protein [Streptomyces sp. AA4]
Length=163
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/134 (52%), Positives = 83/134 (62%), Gaps = 11/134 (8%)
Query 6 DRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQP----VEFGSWPGWYAGVIE 61
+R L +P VL LFR+V GLLFA +G+ LFG V P VE G WP WYA VI+
Sbjct 3 ERVLDRAVPFVLGLFRVVVGLLFAAHGAASLFG--VFGGGPKGATVEVGMWPSWYAAVIQ 60
Query 62 LVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFF 121
LV GLL+A GL TR A +ASG MA AYF +HQP L P+ N G PA +FC+ F
Sbjct 61 LVCGLLVAFGLGTRIAALLASGSMAYAYFVVHQPDGLLPL-----QNHGEPAAMFCWAFL 115
Query 122 LLVFTGGGIYSIDA 135
LL FTG G ++DA
Sbjct 116 LLAFTGPGALAVDA 129
>gi|29832367|ref|NP_827001.1| hypothetical protein SAV_5824 [Streptomyces avermitilis MA-4680]
gi|29609486|dbj|BAC73536.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=151
Score = 110 bits (275), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/131 (50%), Positives = 82/131 (63%), Gaps = 9/131 (6%)
Query 8 RLAGCLPAVLSLFRLVYGLLFAGYGSMILFG----WPVTSAQPVEFGSWPGWYAGVIELV 63
RL P + LFR+V GLLFA +G+ LFG ++ + G+WPGWYA VI+LV
Sbjct 4 RLNSAQPFAIGLFRIVVGLLFACHGAASLFGVLGGAMGSNGGTIPAGTWPGWYAAVIQLV 63
Query 64 AGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLL 123
G L+A GL TRA AF++SG MA AYF +HQ ALWPI NGG + LF + F LL
Sbjct 64 GGSLVALGLGTRAAAFISSGSMAYAYFDVHQSAALWPI-----QNGGELSALFSWSFLLL 118
Query 124 VFTGGGIYSID 134
VFTG G + +D
Sbjct 119 VFTGSGAFGLD 129
>gi|169629019|ref|YP_001702668.1| hypothetical protein MAB_1931c [Mycobacterium abscessus ATCC
19977]
gi|169240986|emb|CAM62014.1| Conserved hypothetical integral membrane protein [Mycobacterium
abscessus]
Length=136
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/132 (52%), Positives = 82/132 (63%), Gaps = 9/132 (6%)
Query 4 DLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTS-AQPVEFGSWPGWYAGVIEL 62
D++ +L P LS FR+V G LF +G+ LFGWP+ S QPV G+ P W+AG+IE
Sbjct 5 DIENKLTALTPITLSAFRVVTGFLFFLHGTSHLFGWPLASYLQPV--GTLP-WWAGIIEF 61
Query 63 VAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFL 122
V G IA G+ TR AFVASG MAVAYF HQP L PI N G A L+ + F L
Sbjct 62 VGGAAIALGIGTRLAAFVASGAMAVAYFTYHQPEGLLPI-----QNSGEAAALYSWSFLL 116
Query 123 LVFTGGGIYSID 134
LVFTGGG S+D
Sbjct 117 LVFTGGGSLSLD 128
>gi|295837913|ref|ZP_06824846.1| DoxX family protein [Streptomyces sp. SPB74]
gi|295826736|gb|EFG65011.1| DoxX family protein [Streptomyces sp. SPB74]
Length=166
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/128 (51%), Positives = 77/128 (61%), Gaps = 5/128 (3%)
Query 2 VKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIE 61
V L R P L FR+V GLLF +GS LFG+P + V G+WPGWYA VI+
Sbjct 19 VPGLASRAERAHPHALGAFRVVVGLLFVCHGSAALFGFPEGMGRTVALGTWPGWYAAVIQ 78
Query 62 LVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFF 121
GLL+ GL TRA AF++SG MA AYF +HQP AL P+ NGG PA LFC+
Sbjct 79 FAGGLLVLLGLGTRAAAFISSGSMAYAYFHVHQPRALLPL-----DNGGEPAALFCWAML 133
Query 122 LLVFTGGG 129
LLVF G G
Sbjct 134 LLVFAGPG 141
>gi|291441770|ref|ZP_06581160.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291344665|gb|EFE71621.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length=149
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/131 (51%), Positives = 80/131 (62%), Gaps = 7/131 (5%)
Query 5 LDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELVA 64
+ RL P VL LFR+V GLLF G+ +FG A PV G WP WYAGVIELVA
Sbjct 1 MSDRLTRHQPLVLGLFRIVLGLLFTSEGAATVFGLLGRKASPV--GDWPFWYAGVIELVA 58
Query 65 GLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLV 124
G+L+ G+ TR+ AF++SG MA AYF HQ L+P+ NGG LFC+GF LLV
Sbjct 59 GVLVLLGVATRSAAFLSSGIMAFAYFTEHQKDGLFPL-----QNGGLSPALFCWGFLLLV 113
Query 125 FTGGGIYSIDA 135
F G G S+ A
Sbjct 114 FFGPGSLSLTA 124
>gi|320011039|gb|ADW05889.1| DoxX family protein [Streptomyces flavogriseus ATCC 33331]
Length=152
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/129 (49%), Positives = 78/129 (61%), Gaps = 7/129 (5%)
Query 8 RLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQ--PVEFGSWPGWYAGVIELVAG 65
RL P L LFR+V G LFA +G+ LFG + V G+WPGWYA VI+LV G
Sbjct 4 RLNRAQPYALGLFRIVIGFLFACHGAASLFGVLGGAMGGGTVPAGTWPGWYAAVIQLVGG 63
Query 66 LLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVF 125
L+A GL TR A V SG MA AYF +HQP +L+P+ NGG + +FC+ F LLVF
Sbjct 64 TLVALGLGTRIAALVCSGSMAYAYFKVHQPESLFPL-----QNGGEASAVFCWAFLLLVF 118
Query 126 TGGGIYSID 134
TG G +D
Sbjct 119 TGSGALGLD 127
>gi|290957231|ref|YP_003488413.1| transmembrane DoxD family protein [Streptomyces scabiei 87.22]
gi|260646757|emb|CBG69854.1| putative transmembrane DoxD family protein [Streptomyces scabiei
87.22]
Length=150
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/120 (52%), Positives = 76/120 (64%), Gaps = 7/120 (5%)
Query 14 PAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELVAGLLIATGLF 73
P VL LFR+V GLLFA G+ +FG A PV G WP WYAGVIEL G+L+ G+
Sbjct 16 PLVLGLFRIVLGLLFASEGAATVFGVLDRKASPV--GDWPFWYAGVIELTCGVLVLLGVA 73
Query 74 TRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTGGGIYSI 133
TR+ AF++SG MA AYF HQ L+P+ NGG +LFC+GF LLVF G G S+
Sbjct 74 TRSAAFLSSGIMAFAYFTEHQKDGLFPL-----QNGGLAPVLFCWGFLLLVFAGPGALSL 128
>gi|302560856|ref|ZP_07313198.1| DoxX family protein [Streptomyces griseoflavus Tu4000]
gi|302478474|gb|EFL41567.1| DoxX family protein [Streptomyces griseoflavus Tu4000]
Length=151
Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/133 (49%), Positives = 81/133 (61%), Gaps = 8/133 (6%)
Query 5 LDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQ---PVEFGSWPGWYAGVIE 61
+ RL P VL +FR+V GLLFA +G+ LFG + E G+WP WYA +IE
Sbjct 1 MTERLNSAQPYVLGMFRIVVGLLFACHGAASLFGVLGGAGGSGGTAETGAWPNWYAALIE 60
Query 62 LVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFF 121
LV G ++ GL TRA AF++SG MA AYF +HQP ALWPI N G A L+C+ F
Sbjct 61 LVGGGMVLLGLGTRAAAFLSSGAMAYAYFKVHQPEALWPI-----QNNGEAAALYCWAMF 115
Query 122 LLVFTGGGIYSID 134
LLVFTG G +D
Sbjct 116 LLVFTGSGALGLD 128
>gi|110633288|ref|YP_673496.1| DoxX [Mesorhizobium sp. BNC1]
gi|110284272|gb|ABG62331.1| DoxX [Chelativorans sp. BNC1]
Length=140
Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/136 (47%), Positives = 82/136 (61%), Gaps = 7/136 (5%)
Query 2 VKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIE 61
+ +L+ RL P VL++ R++ LLF +G+ L G+P T P F S G +AG +E
Sbjct 1 MNNLEARLTELSPYVLAILRIMTALLFMAHGTAKLLGFPDTGMSPPLF-SLAG-FAGALE 58
Query 62 LVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFF 121
LV G+L+ GLFTR VAF+ SGEMAVAYF H +PI NGG AILFCF F
Sbjct 59 LVGGILLVLGLFTRPVAFILSGEMAVAYFMAHASRDFYPI-----LNGGETAILFCFIFL 113
Query 122 LLVFTGGGIYSIDARR 137
LVF G G +S+ +R
Sbjct 114 YLVFAGPGAWSLSGQR 129
>gi|72160508|ref|YP_288165.1| integral membrane protein [Thermobifida fusca YX]
gi|71914240|gb|AAZ54142.1| putative integral membrane protein [Thermobifida fusca YX]
Length=147
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/122 (49%), Positives = 79/122 (65%), Gaps = 8/122 (6%)
Query 16 VLSLFRLVYGLLFAGYGSMILFGW---PVTSAQPVEFGSWPGWYAGVIELVAGLLIATGL 72
VL+LFR+V GL+F +G LFG + Q VEF SWPGW+A +I+LV G L+ GL
Sbjct 10 VLALFRIVVGLMFLCHGVASLFGVLGGNQGTGQAVEFASWPGWWAALIQLVCGALVLLGL 69
Query 73 FTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTGGGIYS 132
FTR A +ASG MA AYF +HQP+AL P+ NGG A ++C+ FFL+ G G ++
Sbjct 70 FTRPSAALASGSMAYAYFVVHQPHALLPL-----NNGGELAAMYCWAFFLIAILGPGAWA 124
Query 133 ID 134
+D
Sbjct 125 LD 126
>gi|302551086|ref|ZP_07303428.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
gi|302468704|gb|EFL31797.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
Length=150
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/142 (48%), Positives = 85/142 (60%), Gaps = 11/142 (7%)
Query 5 LDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFG---WPVTSAQPVEFGSWPGWYAGVIE 61
+ RL G P L LFR+V GLLFA +G++ LFG G+WP WYA VIE
Sbjct 1 MTARLNGAQPYALGLFRIVIGLLFACHGAVALFGVLGGADGKGGTAPTGAWPNWYAAVIE 60
Query 62 LVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFF 121
LV G+L+ GL TR AF++SG MA AYF +HQP LWPI N G A ++C+ F
Sbjct 61 LVGGILVLLGLGTRVAAFISSGAMAYAYFKVHQPQGLWPI-----ENNGEGAAMYCWAMF 115
Query 122 LLVFTGGGIYSID---ARRTVT 140
LL+FTG G + +D A+RT T
Sbjct 116 LLIFTGSGAFGVDRLFAKRTST 137
>gi|294629112|ref|ZP_06707672.1| integral membrane protein [Streptomyces sp. e14]
gi|292832445|gb|EFF90794.1| integral membrane protein [Streptomyces sp. e14]
Length=151
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/138 (49%), Positives = 84/138 (61%), Gaps = 12/138 (8%)
Query 8 RLAGCLPAVLSLFRLVYGLLFAGYGSMILFG----WPVTSAQPVEFGSWPGWYAGVIELV 63
RL L L+R+V GLLFA +G+ LFG T V G+WPGWYA +I+LV
Sbjct 4 RLHSTQSYALGLYRIVVGLLFACHGAASLFGVLGGAAGTDGGTVSAGAWPGWYAALIQLV 63
Query 64 AGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLL 123
G L+ GL TR A +ASG MA AYF++HQ ALWPI NGG P+ L+C+ F LL
Sbjct 64 GGALVLLGLGTRGAALIASGSMAYAYFYVHQKAALWPI-----ENGGEPSALYCWAFLLL 118
Query 124 VFTGGGIYSID---ARRT 138
VFTG G + +D ARR+
Sbjct 119 VFTGSGAFGLDTLFARRS 136
>gi|290960817|ref|YP_003491999.1| protein [Streptomyces scabiei 87.22]
gi|260650343|emb|CBG73459.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length=151
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/130 (53%), Positives = 79/130 (61%), Gaps = 8/130 (6%)
Query 8 RLAGCLPAVLSLFRLVYGLLFAGYGSMILFG---WPVTSAQPVEFGSWPGWYAGVIELVA 64
RL P VL LFR+V GLLFA +G+ LFG GSWPGWYA VI+LV
Sbjct 4 RLNRAQPYVLGLFRIVIGLLFACHGAKSLFGVLGGVDGQGATAAAGSWPGWYAAVIQLVG 63
Query 65 GLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLV 124
G L+ GL TRA AF+ASG MA AYF +HQP ALW P NGG A L+C+ FLL+
Sbjct 64 GTLVLLGLGTRAAAFIASGSMAYAYFKVHQPQALW-----PSQNGGEAAALYCWAMFLLL 118
Query 125 FTGGGIYSID 134
FTG G +D
Sbjct 119 FTGSGGLGLD 128
>gi|296268373|ref|YP_003651005.1| DoxX family protein [Thermobispora bispora DSM 43833]
gi|296091160|gb|ADG87112.1| DoxX family protein [Thermobispora bispora DSM 43833]
Length=150
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/134 (48%), Positives = 83/134 (62%), Gaps = 12/134 (8%)
Query 4 DLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILF---GWPVTSAQPVEFGSWPGWYAGVI 60
LDR G VLSLFR+V GLLF +G+ LF G + + Q + G+WPGW+A +I
Sbjct 2 RLDRFHGG----VLSLFRMVVGLLFLTHGAASLFNVFGGHMGTGQAIPAGAWPGWWAALI 57
Query 61 ELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGF 120
+LV G L+ GLFTR A + SG MA AYF +HQP AL P+ NGG A LFC+GF
Sbjct 58 QLVCGGLVLVGLFTRVSALLCSGSMAYAYFVVHQPKALLPL-----QNGGELAALFCWGF 112
Query 121 FLLVFTGGGIYSID 134
FL+ G G ++++
Sbjct 113 FLIAVLGPGPWAVE 126
>gi|262200130|ref|YP_003271338.1| DoxX family protein [Gordonia bronchialis DSM 43247]
gi|262083477|gb|ACY19445.1| DoxX family protein [Gordonia bronchialis DSM 43247]
Length=130
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/115 (50%), Positives = 69/115 (60%), Gaps = 7/115 (6%)
Query 22 LVYGLLFAGYGSMILFGWPVT--SAQPVEFGSWPGWYAGVIELVAGLLIATGLFTRAVAF 79
+V G LF +G+ LF WPV S Q +FG+WP W+AG I+ V GLLI G+ TR AF
Sbjct 1 MVVGFLFFCHGTSTLFAWPVAPYSGQTADFGAWPSWWAGAIQFVGGLLIMLGVGTRIAAF 60
Query 80 VASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTGGGIYSID 134
+ SG MAVAYFW HQ L PI N G A LFC+ LLVF G G ++D
Sbjct 61 IGSGSMAVAYFWKHQGDGLLPI-----QNDGDSAALFCWALLLLVFIGPGRLALD 110
>gi|344999429|ref|YP_004802283.1| DoxX family protein [Streptomyces sp. SirexAA-E]
gi|344315055|gb|AEN09743.1| DoxX family protein [Streptomyces sp. SirexAA-E]
Length=148
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/144 (44%), Positives = 81/144 (57%), Gaps = 14/144 (9%)
Query 1 MVKDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVI 60
M L+R P L+LFR V G LFA +G+ LF + G+WP WYA +I
Sbjct 1 MFTHLNR----AQPYTLALFRFVIGFLFACHGATSLFH--AMGGGNIPAGTWPVWYAAMI 54
Query 61 ELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGF 120
+LV G L+A GL TR A + SG MA AYF +HQP +L+ P NGG + LFC+ F
Sbjct 55 QLVGGTLVALGLGTRIAALICSGSMAYAYFNVHQPESLY-----PAQNGGEASALFCWAF 109
Query 121 FLLVFTGGGIYSID---ARRTVTA 141
LLVFTG G ++D + R TA
Sbjct 110 LLLVFTGPGAVAVDRLFSSRAATA 133
>gi|222149083|ref|YP_002550040.1| hypothetical protein Avi_2820 [Agrobacterium vitis S4]
gi|221736068|gb|ACM37031.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length=130
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/128 (49%), Positives = 75/128 (59%), Gaps = 7/128 (5%)
Query 8 RLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELVAGLL 67
RL+ P VLS+ R++ GLLF +G L G+P + P S P W AG IELV G L
Sbjct 5 RLSPWAPTVLSILRIIAGLLFLEHGMSKLLGFPPSDMNPAVM-SLP-WIAGCIELVGGAL 62
Query 68 IATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTG 127
I GLFTR AF+ASG A AYF +H +P+ N G PAILFCF FF +VF G
Sbjct 63 ITIGLFTRPAAFIASGMCAFAYFLVHAQMGFYPM-----NNHGEPAILFCFVFFYIVFAG 117
Query 128 GGIYSIDA 135
G S+DA
Sbjct 118 PGPLSVDA 125
>gi|226359730|ref|YP_002777508.1| hypothetical protein ROP_03160 [Rhodococcus opacus B4]
gi|226238215|dbj|BAH48563.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=164
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/134 (42%), Positives = 73/134 (55%), Gaps = 7/134 (5%)
Query 3 KDLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVT--SAQPVEFGSWPGWYAGVI 60
K + R + ++ FR+V G LF +G+ LF WP S G+WP W+ VI
Sbjct 4 KRISRLRGASVDYAIAAFRVVIGFLFFCHGTSTLFAWPTAPHSGHTAAVGAWPSWWGAVI 63
Query 61 ELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGF 120
+LV G + GL TR AF+ASG MA AYFW HQP PI N G + +FC+
Sbjct 64 QLVCGAALFLGLGTRIAAFLASGSMAYAYFWSHQPDGALPI-----QNNGELSAIFCWAL 118
Query 121 FLLVFTGGGIYSID 134
FL++F GGG S+D
Sbjct 119 FLMIFLGGGALSLD 132
>gi|302870202|ref|YP_003838839.1| DoxX family protein [Micromonospora aurantiaca ATCC 27029]
gi|315503520|ref|YP_004082407.1| doxx family protein [Micromonospora sp. L5]
gi|302573061|gb|ADL49263.1| DoxX family protein [Micromonospora aurantiaca ATCC 27029]
gi|315410139|gb|ADU08256.1| DoxX family protein [Micromonospora sp. L5]
Length=148
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/124 (48%), Positives = 77/124 (63%), Gaps = 10/124 (8%)
Query 16 VLSLFRLVYGLLFAGYGSMILFGW----PVTSAQPVEFGSWPGWYAGVIELVAGLLIATG 71
VLSLFR+V GLLF +G+ +FG P T V F +WP W+A +I+LV G L+ G
Sbjct 10 VLSLFRIVTGLLFLCHGAASIFGLFGGNPATGGA-VPFATWPSWWAALIQLVCGALVLVG 68
Query 72 LFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTGGGIY 131
LFTR A +ASG MA AYF +HQP+ L P+ NGG A LFC+ F L+ G G +
Sbjct 69 LFTRPAALLASGSMAYAYFVVHQPHHLMPM-----QNGGELAALFCWSFLLVAVLGPGNW 123
Query 132 SIDA 135
++DA
Sbjct 124 ALDA 127
>gi|116252308|ref|YP_768146.1| transmembrane DoxD family protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256956|emb|CAK08050.1| putative transmembrane DoxD family protein [Rhizobium leguminosarum
bv. viciae 3841]
Length=130
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/133 (45%), Positives = 79/133 (60%), Gaps = 11/133 (8%)
Query 8 RLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGW--YAGVIELVAG 65
RL P L+ R++ LLF +G+M LFG+P + GS P +A ++ELV G
Sbjct 6 RLFAYQPYGLAALRIITALLFIEHGTMKLFGFPASQMS----GSLPPLMLFAALLELVGG 61
Query 66 LLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVF 125
+LI GL TR VAF+ +GEMAVAYF H P + + P N G AILFCF F LVF
Sbjct 62 ILILVGLLTRPVAFLLAGEMAVAYFMAHAPSSFF-----PAVNQGDAAILFCFVFLYLVF 116
Query 126 TGGGIYSIDARRT 138
+G G +++D R+T
Sbjct 117 SGPGAFAVDNRKT 129
>gi|327191037|gb|EGE58090.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512]
Length=130
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/134 (44%), Positives = 79/134 (59%), Gaps = 11/134 (8%)
Query 7 RRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGW--YAGVIELVA 64
RL+ P L+ R++ LLF +G+M LFG+P + GS P +A ++ELV
Sbjct 5 ERLSAYRPYGLAALRIITALLFIEHGTMKLFGFPASQMS----GSLPPLMLFAALLELVG 60
Query 65 GLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLV 124
G+LI GL TR VAF+ +GEMAVAYF H P + + P N G AILFCF F L
Sbjct 61 GILILVGLLTRPVAFLLAGEMAVAYFMAHAPNSFF-----PAVNQGDAAILFCFVFLYLF 115
Query 125 FTGGGIYSIDARRT 138
F+G G +++D R+T
Sbjct 116 FSGPGAFAVDNRKT 129
>gi|163849878|ref|YP_001637921.1| DoxX family protein [Methylobacterium extorquens PA1]
gi|240137104|ref|YP_002961573.1| hypothetical protein MexAM1_META1p0344 [methylobacterium extorquens
AM1]
gi|254559116|ref|YP_003066211.1| hypothetical protein METDI0499 [Methylobacterium extorquens DM4]
gi|163661483|gb|ABY28850.1| DoxX family protein [Methylobacterium extorquens PA1]
gi|240007070|gb|ACS38296.1| conserved hypothetical protein, putative inner membrane protein
[Methylobacterium extorquens AM1]
gi|254266394|emb|CAX22158.1| conserved hypothetical protein, putative inner membrane protein
[Methylobacterium extorquens DM4]
Length=133
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/134 (45%), Positives = 79/134 (59%), Gaps = 7/134 (5%)
Query 4 DLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELV 63
DL P +LS+ R+V L+F +G+ + G+P +S P S PG AG++ELV
Sbjct 2 DLTTTTTHWAPRMLSILRIVSALIFMAHGTQKILGFPASSMNP-PLLSLPG-IAGLLELV 59
Query 64 AGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLL 123
G L+ GLF+R VAF+ SG+MA AYF H P + + P NGG AILFCF F +
Sbjct 60 GGALLVVGLFSRPVAFILSGQMAFAYFIAHAPKSFF-----PALNGGDAAILFCFVFLYI 114
Query 124 VFTGGGIYSIDARR 137
F G G +SIDA+R
Sbjct 115 AFAGPGPWSIDAQR 128
>gi|190891930|ref|YP_001978472.1| hypothetical protein [Rhizobium etli CIAT 652]
gi|190697209|gb|ACE91294.1| hypothetical conserved membrane protein [Rhizobium etli CIAT
652]
Length=130
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/134 (43%), Positives = 79/134 (59%), Gaps = 11/134 (8%)
Query 7 RRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGW--YAGVIELVA 64
RL+ P L+ R++ LLF +G+M LFG+P + GS P +A ++ELV
Sbjct 5 ERLSAYRPYGLAALRIITALLFIEHGTMKLFGFPASQMS----GSLPPLMLFAALLELVG 60
Query 65 GLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLV 124
G+LI GL TR +AF+ +GEMAVAYF H P + + P N G AILFCF F L
Sbjct 61 GILILVGLLTRPIAFLLAGEMAVAYFMAHAPNSFF-----PAVNQGDAAILFCFVFLYLF 115
Query 125 FTGGGIYSIDARRT 138
F+G G +++D R+T
Sbjct 116 FSGPGAFAVDNRKT 129
>gi|218528510|ref|YP_002419326.1| DoxX family protein [Methylobacterium chloromethanicum CM4]
gi|218520813|gb|ACK81398.1| DoxX family protein [Methylobacterium chloromethanicum CM4]
Length=133
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/134 (44%), Positives = 79/134 (59%), Gaps = 7/134 (5%)
Query 4 DLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELV 63
DL P +LS+ R+V L+F +G+ + G+P +S P S PG AG++EL+
Sbjct 2 DLTTTTTHWAPRMLSVLRIVSALIFMAHGTQKILGFPASSMNP-PLLSLPG-IAGLLELI 59
Query 64 AGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLL 123
G L+ GLF+R VAF+ SG+MA AYF H P + + P NGG AILFCF F +
Sbjct 60 GGALLVVGLFSRPVAFILSGQMAFAYFIAHAPKSFF-----PALNGGDAAILFCFVFLYI 114
Query 124 VFTGGGIYSIDARR 137
F G G +SIDA+R
Sbjct 115 AFAGPGPWSIDAQR 128
>gi|298293956|ref|YP_003695895.1| DoxX family protein [Starkeya novella DSM 506]
gi|296930467|gb|ADH91276.1| DoxX family protein [Starkeya novella DSM 506]
Length=131
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/135 (46%), Positives = 78/135 (58%), Gaps = 9/135 (6%)
Query 7 RRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWYAGVIELVAGL 66
RLA P VLSL R+ LL +G+ + G+P T A + + PG AG+ ELV G+
Sbjct 6 NRLA---PHVLSLLRIASALLLLQHGTTKILGFPQTQASGISL-TTPGGIAGIFELVGGV 61
Query 67 LIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFT 126
L+ GLF+R AF+ SG AVAYF +H P +PI NGG A L+CF FF L F
Sbjct 62 LLLIGLFSRPTAFILSGMTAVAYFMVHAPQDFYPI-----VNGGELAALYCFVFFYLTFA 116
Query 127 GGGIYSIDARRTVTA 141
G G +SIDA R+ A
Sbjct 117 GPGPWSIDALRSRDA 131
>gi|238061354|ref|ZP_04606063.1| integral membrane protein [Micromonospora sp. ATCC 39149]
gi|237883165|gb|EEP71993.1| integral membrane protein [Micromonospora sp. ATCC 39149]
Length=149
Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/134 (48%), Positives = 80/134 (60%), Gaps = 12/134 (8%)
Query 4 DLDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGW---PVTSAQPVEFGSWPGWYAGVI 60
+LDR L G VLSLFR+V GLLF +G LFG + Q V G+WPGWYA +I
Sbjct 2 NLDR-LGG---PVLSLFRMVIGLLFLFHGLSSLFGMFGGARGTGQAVPLGTWPGWYAALI 57
Query 61 ELVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGF 120
+ V G L+ GLFTR A +ASG MA AYF +HQP L P+ NGG + LFC+ F
Sbjct 58 QAVCGALVLAGLFTRPAALLASGSMAYAYFVVHQPEGLLPL-----RNGGELSALFCWSF 112
Query 121 FLLVFTGGGIYSID 134
L+ G G +++D
Sbjct 113 VLIAVLGPGSWAVD 126
>gi|328882105|emb|CCA55344.1| putative integral membrane protein [Streptomyces venezuelae ATCC
10712]
Length=218
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 81/132 (62%), Gaps = 7/132 (5%)
Query 5 LDRRLAGCLPAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQ--PVEFGSWPGWYAGVIEL 62
L RL P L LFR+V GLLFA +G+ LFG + V G+WP WYA VI+L
Sbjct 66 LTGRLDQAQPYALGLFRIVVGLLFACHGAASLFGVLGGAMGGGTVPAGTWPSWYAAVIQL 125
Query 63 VAGLLIATGLFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFL 122
AG L+ GL TR AF+ASG MA AYF +HQP +L+P+ NGG A LFC+ F L
Sbjct 126 GAGGLVLLGLGTRTAAFLASGSMAYAYFKVHQPESLFPL-----QNGGETAALFCWAFVL 180
Query 123 LVFTGGGIYSID 134
LVFTG G ++D
Sbjct 181 LVFTGPGALALD 192
>gi|325293692|ref|YP_004279556.1| hypothetical protein AGROH133_08044 [Agrobacterium sp. H13-3]
gi|325061545|gb|ADY65236.1| hypothetical protein AGROH133_08044 [Agrobacterium sp. H13-3]
Length=129
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/126 (46%), Positives = 73/126 (58%), Gaps = 11/126 (8%)
Query 14 PAVLSLFRLVYGLLFAGYGSMILFGWPVTSAQPVEFGSWPGWY--AGVIELVAGLLIATG 71
P L R++ LLF +G+ LFG+P + GS P A ++E V G+L+ G
Sbjct 12 PQALGALRIMTALLFISHGTQKLFGFPASQMD----GSLPTMLLVAALLEAVGGILVLVG 67
Query 72 LFTRAVAFVASGEMAVAYFWMHQPYALWPIGGPPDGNGGTPAILFCFGFFLLVFTGGGIY 131
LFTR VAF+ SG+MAVAYF H P + + P NGG AILFCF F LVF G G +
Sbjct 68 LFTRPVAFILSGQMAVAYFIAHGPKSFF-----PALNGGDAAILFCFIFLYLVFAGPGAF 122
Query 132 SIDARR 137
S+D RR
Sbjct 123 SVDERR 128
Lambda K H
0.329 0.147 0.494
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130347035928
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40