BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3067

Length=136
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|308406045|ref|ZP_07494912.2|  hypothetical protein TMLG_02921 ...   276    1e-72
gi|15610204|ref|NP_217583.1|  hypothetical protein Rv3067 [Mycoba...   273    6e-72
gi|121638952|ref|YP_979176.1|  hypothetical protein BCG_3092 [Myc...   271    2e-71
gi|308373620|ref|ZP_07433070.2|  hypothetical protein TMEG_02339 ...   176    1e-42
gi|240168667|ref|ZP_04747326.1|  hypothetical protein MkanA1_0510...   102    2e-20
gi|118618765|ref|YP_907097.1|  hypothetical protein MUL_3463 [Myc...  92.0    2e-17
gi|183981586|ref|YP_001849877.1|  hypothetical protein MMAR_1570 ...  91.3    4e-17
gi|254820682|ref|ZP_05225683.1|  hypothetical protein MintA_12176...  63.5    1e-08
gi|41409516|ref|NP_962352.1|  hypothetical protein MAP3418 [Mycob...  60.8    6e-08
gi|336459617|gb|EGO38552.1|  Protein of unknown function (DUF732)...  60.5    8e-08
gi|118466072|ref|YP_883411.1|  hypothetical protein MAV_4271 [Myc...  60.1    1e-07
gi|342861513|ref|ZP_08718160.1|  hypothetical protein MCOL_21611 ...  59.7    2e-07
gi|342858463|ref|ZP_08715118.1|  hypothetical protein MCOL_06296 ...  59.3    2e-07
gi|296164795|ref|ZP_06847355.1|  conserved hypothetical protein [...  58.2    4e-07
gi|296168904|ref|ZP_06850573.1|  conserved hypothetical protein [...  57.8    6e-07
gi|342861289|ref|ZP_08717937.1|  hypothetical protein MCOL_20496 ...  57.0    9e-07
gi|254823259|ref|ZP_05228260.1|  hypothetical protein MintA_25239...  56.6    1e-06
gi|118466065|ref|YP_882736.1|  hypothetical protein MAV_3558 [Myc...  55.5    3e-06
gi|118466879|ref|YP_882536.1|  hypothetical protein MAV_3354 [Myc...  55.1    3e-06
gi|41407252|ref|NP_960088.1|  hypothetical protein MAP1154 [Mycob...  55.1    4e-06
gi|15841274|ref|NP_336311.1|  hypothetical protein MT1854 [Mycoba...  54.3    5e-06
gi|167967401|ref|ZP_02549678.1|  hypothetical protein MtubH3_0492...  54.3    6e-06
gi|340626814|ref|YP_004745266.1|  hypothetical protein MCAN_18201...  54.3    6e-06
gi|15608941|ref|NP_216320.1|  hypothetical protein Rv1804c [Mycob...  54.3    6e-06
gi|289554423|ref|ZP_06443633.1|  conserved hypothetical protein [...  54.3    6e-06
gi|254775796|ref|ZP_05217312.1|  hypothetical protein MaviaA2_141...  53.9    8e-06
gi|333988948|ref|YP_004521562.1|  hypothetical protein JDM601_030...  53.9    8e-06
gi|333989793|ref|YP_004522407.1|  hypothetical protein JDM601_115...  53.1    1e-05
gi|41408884|ref|NP_961720.1|  hypothetical protein MAP2786c [Myco...  53.1    1e-05
gi|254823283|ref|ZP_05228284.1|  hypothetical protein MintA_25369...  52.8    2e-05
gi|118618122|ref|YP_906454.1|  hypothetical protein MUL_2657 [Myc...  52.4    2e-05
gi|296171947|ref|ZP_06852992.1|  conserved hypothetical protein [...  52.4    2e-05
gi|254818543|ref|ZP_05223544.1|  hypothetical protein MintA_01396...  52.0    3e-05
gi|240173138|ref|ZP_04751796.1|  hypothetical protein MkanA1_2774...  51.6    4e-05
gi|296171949|ref|ZP_06852994.1|  conserved hypothetical protein [...  51.6    4e-05
gi|183981255|ref|YP_001849546.1|  hypothetical protein MMAR_1233 ...  51.6    4e-05
gi|118463814|ref|YP_882093.1|  hypothetical protein MAV_2907 [Myc...  50.8    6e-05
gi|118619212|ref|YP_907544.1|  hypothetical protein MUL_4013 [Myc...  48.9    3e-04
gi|254818542|ref|ZP_05223543.1|  hypothetical protein MintA_01391...  48.5    4e-04
gi|118465355|ref|YP_882735.1|  hypothetical protein MAV_3557 [Myc...  48.1    4e-04
gi|41408883|ref|NP_961719.1|  hypothetical protein MAP2785c [Myco...  48.1    4e-04
gi|15608411|ref|NP_215787.1|  hypothetical protein Rv1271c [Mycob...  48.1    4e-04
gi|254775999|ref|ZP_05217515.1|  hypothetical protein MaviaA2_152...  48.1    4e-04
gi|15840718|ref|NP_335755.1|  hypothetical protein MT1309 [Mycoba...  48.1    4e-04
gi|326384601|ref|ZP_08206280.1|  hypothetical protein SCNU_16753 ...  47.8    6e-04
gi|240169301|ref|ZP_04747960.1|  hypothetical protein MkanA1_0830...  47.4    6e-04
gi|240171347|ref|ZP_04750006.1|  hypothetical protein MkanA1_1869...  47.4    8e-04
gi|111026930|ref|YP_708908.1|  hypothetical protein RHA1_ro11103 ...  47.0    0.001
gi|296164250|ref|ZP_06846841.1|  conserved hypothetical protein [...  46.6    0.001
gi|183982693|ref|YP_001850984.1|  hypothetical protein MMAR_2686 ...  46.2    0.001


>gi|308406045|ref|ZP_07494912.2| hypothetical protein TMLG_02921 [Mycobacterium tuberculosis SUMu012]
 gi|308364719|gb|EFP53570.1| hypothetical protein TMLG_02921 [Mycobacterium tuberculosis SUMu012]
 gi|323718299|gb|EGB27477.1| hypothetical protein TMMG_02199 [Mycobacterium tuberculosis CDC1551A]
 gi|339295902|gb|AEJ48013.1| hypothetical protein CCDC5079_2823 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299515|gb|AEJ51625.1| hypothetical protein CCDC5180_2788 [Mycobacterium tuberculosis 
CCDC5180]
Length=181

 Score =  276 bits (705),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    LLTVGVGIGAAILLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSV  60
            LLTVGVGIGAAILLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSV
Sbjct  46   LLTVGVGIGAAILLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSV  105

Query  61   FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAVS  120
            FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAVS
Sbjct  106  FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAVS  165

Query  121  IRTYCPKYDAVLPPGS  136
            IRTYCPKYDAVLPPGS
Sbjct  166  IRTYCPKYDAVLPPGS  181


>gi|15610204|ref|NP_217583.1| hypothetical protein Rv3067 [Mycobacterium tuberculosis H37Rv]
 gi|15842636|ref|NP_337673.1| hypothetical protein MT3152 [Mycobacterium tuberculosis CDC1551]
 gi|31794246|ref|NP_856739.1| hypothetical protein Mb3094 [Mycobacterium bovis AF2122/97]
 64 more sequence titles
 gi|148662921|ref|YP_001284444.1| hypothetical protein MRA_3100 [Mycobacterium tuberculosis H37Ra]
 gi|148824259|ref|YP_001289013.1| hypothetical protein TBFG_13084 [Mycobacterium tuberculosis F11]
 gi|167969670|ref|ZP_02551947.1| hypothetical protein MtubH3_17263 [Mycobacterium tuberculosis 
H37Ra]
 gi|253797833|ref|YP_003030834.1| hypothetical protein TBMG_00900 [Mycobacterium tuberculosis KZN 
1435]
 gi|254365696|ref|ZP_04981741.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254552143|ref|ZP_05142590.1| hypothetical protein Mtube_17106 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289444630|ref|ZP_06434374.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448746|ref|ZP_06438490.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289553142|ref|ZP_06442352.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289571273|ref|ZP_06451500.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575778|ref|ZP_06456005.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746876|ref|ZP_06506254.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751741|ref|ZP_06511119.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289755184|ref|ZP_06514562.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289759192|ref|ZP_06518570.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763246|ref|ZP_06522624.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294993429|ref|ZP_06799120.1| hypothetical protein Mtub2_02707 [Mycobacterium tuberculosis 
210]
 gi|297635700|ref|ZP_06953480.1| hypothetical protein MtubK4_16332 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297732698|ref|ZP_06961816.1| hypothetical protein MtubKR_16492 [Mycobacterium tuberculosis 
KZN R506]
 gi|298526539|ref|ZP_07013948.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306777374|ref|ZP_07415711.1| hypothetical protein TMAG_03240 [Mycobacterium tuberculosis SUMu001]
 gi|306781278|ref|ZP_07419615.1| hypothetical protein TMBG_03218 [Mycobacterium tuberculosis SUMu002]
 gi|306785919|ref|ZP_07424241.1| hypothetical protein TMCG_01482 [Mycobacterium tuberculosis SUMu003]
 gi|306790273|ref|ZP_07428595.1| hypothetical protein TMDG_03307 [Mycobacterium tuberculosis SUMu004]
 gi|306799010|ref|ZP_07437312.1| hypothetical protein TMFG_00269 [Mycobacterium tuberculosis SUMu006]
 gi|306804853|ref|ZP_07441521.1| hypothetical protein TMHG_02276 [Mycobacterium tuberculosis SUMu008]
 gi|306809046|ref|ZP_07445714.1| hypothetical protein TMGG_02607 [Mycobacterium tuberculosis SUMu007]
 gi|306973490|ref|ZP_07486151.1| hypothetical protein TMJG_03237 [Mycobacterium tuberculosis SUMu010]
 gi|307081200|ref|ZP_07490370.1| hypothetical protein TMKG_02313 [Mycobacterium tuberculosis SUMu011]
 gi|313660030|ref|ZP_07816910.1| hypothetical protein MtubKV_16492 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633075|ref|YP_004724717.1| hypothetical protein MAF_30740 [Mycobacterium africanum GM041182]
 gi|340628058|ref|YP_004746510.1| hypothetical protein MCAN_30921 [Mycobacterium canettii CIPT 
140010059]
 gi|1781146|emb|CAB06256.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13882952|gb|AAK47487.1| hypothetical protein MT3152 [Mycobacterium tuberculosis CDC1551]
 gi|31619841|emb|CAD96781.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|134151209|gb|EBA43254.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148507073|gb|ABQ74882.1| hypothetical protein MRA_3100 [Mycobacterium tuberculosis H37Ra]
 gi|148722786|gb|ABR07411.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253319336|gb|ACT23939.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289417549|gb|EFD14789.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421704|gb|EFD18905.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289437774|gb|EFD20267.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289540209|gb|EFD44787.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289545027|gb|EFD48675.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289687404|gb|EFD54892.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289692328|gb|EFD59757.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695771|gb|EFD63200.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710752|gb|EFD74768.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289714756|gb|EFD78768.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496333|gb|EFI31627.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308214265|gb|EFO73664.1| hypothetical protein TMAG_03240 [Mycobacterium tuberculosis SUMu001]
 gi|308325920|gb|EFP14771.1| hypothetical protein TMBG_03218 [Mycobacterium tuberculosis SUMu002]
 gi|308329442|gb|EFP18293.1| hypothetical protein TMCG_01482 [Mycobacterium tuberculosis SUMu003]
 gi|308333287|gb|EFP22138.1| hypothetical protein TMDG_03307 [Mycobacterium tuberculosis SUMu004]
 gi|308340758|gb|EFP29609.1| hypothetical protein TMFG_00269 [Mycobacterium tuberculosis SUMu006]
 gi|308344625|gb|EFP33476.1| hypothetical protein TMGG_02607 [Mycobacterium tuberculosis SUMu007]
 gi|308348573|gb|EFP37424.1| hypothetical protein TMHG_02276 [Mycobacterium tuberculosis SUMu008]
 gi|308357132|gb|EFP45983.1| hypothetical protein TMJG_03237 [Mycobacterium tuberculosis SUMu010]
 gi|308361084|gb|EFP49935.1| hypothetical protein TMKG_02313 [Mycobacterium tuberculosis SUMu011]
 gi|326902711|gb|EGE49644.1| hypothetical protein TBPG_00560 [Mycobacterium tuberculosis W-148]
 gi|328457612|gb|AEB03035.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339332431|emb|CCC28144.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|340006248|emb|CCC45423.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
 gi|344220903|gb|AEN01534.1| hypothetical protein MTCTRI2_3130 [Mycobacterium tuberculosis 
CTRI-2]
Length=136

 Score =  273 bits (698),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 135/136 (99%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    LLTVGVGIGAAILLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSV  60
            +LTVGVGIGAAILLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSV
Sbjct  1    MLTVGVGIGAAILLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSV  60

Query  61   FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAVS  120
            FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAVS
Sbjct  61   FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAVS  120

Query  121  IRTYCPKYDAVLPPGS  136
            IRTYCPKYDAVLPPGS
Sbjct  121  IRTYCPKYDAVLPPGS  136


>gi|121638952|ref|YP_979176.1| hypothetical protein BCG_3092 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224991444|ref|YP_002646133.1| hypothetical protein JTY_3087 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|121494600|emb|CAL73081.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224774559|dbj|BAH27365.1| hypothetical protein JTY_3087 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341602991|emb|CCC65669.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=136

 Score =  271 bits (694),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 134/136 (99%), Positives = 135/136 (99%), Gaps = 0/136 (0%)

Query  1    LLTVGVGIGAAILLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSV  60
            +L VGVGIGAAILLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSV
Sbjct  1    MLAVGVGIGAAILLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSV  60

Query  61   FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAVS  120
            FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAVS
Sbjct  61   FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAVS  120

Query  121  IRTYCPKYDAVLPPGS  136
            IRTYCPKYDAVLPPGS
Sbjct  121  IRTYCPKYDAVLPPGS  136


>gi|308373620|ref|ZP_07433070.2| hypothetical protein TMEG_02339 [Mycobacterium tuberculosis SUMu005]
 gi|308336942|gb|EFP25793.1| hypothetical protein TMEG_02339 [Mycobacterium tuberculosis SUMu005]
Length=85

 Score =  176 bits (445),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 84/85 (99%), Positives = 85/85 (100%), Gaps = 0/85 (0%)

Query  52   LQSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGD  111
            +QSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGD
Sbjct  1    MQSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGD  60

Query  112  RTTAYVAVSIRTYCPKYDAVLPPGS  136
            RTTAYVAVSIRTYCPKYDAVLPPGS
Sbjct  61   RTTAYVAVSIRTYCPKYDAVLPPGS  85


>gi|240168667|ref|ZP_04747326.1| hypothetical protein MkanA1_05100 [Mycobacterium kansasii ATCC 
12478]
Length=211

 Score =  102 bits (253),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 61/128 (48%), Positives = 82/128 (65%), Gaps = 2/128 (1%)

Query  1    LLTVGVGIGAAILLG-WFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQS-PDLD  58
            LL +G+GI   I++G W     + P Q       PPA     +A TA  P+T+ S P+ D
Sbjct  84   LLLLGIGIAVLIVVGGWALTTEKSPRQGAQPPAAPPATTAAPTATTAPAPTTIASTPEQD  143

Query  59   SVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVA  118
            S ++ +L+DRGI+F NPDAAVYNGK+VC N   GMTV Q+V A ++S+PAL      YVA
Sbjct  144  SGYIQSLNDRGITFANPDAAVYNGKLVCLNFRRGMTVDQIVAAFRASNPALSSNAEDYVA  203

Query  119  VSIRTYCP  126
            +S+RTYCP
Sbjct  204  ISMRTYCP  211


>gi|118618765|ref|YP_907097.1| hypothetical protein MUL_3463 [Mycobacterium ulcerans Agy99]
 gi|118570875|gb|ABL05626.1| conserved hypothetical secreted protein [Mycobacterium ulcerans 
Agy99]
Length=214

 Score = 92.0 bits (227),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 38/71 (54%), Positives = 53/71 (75%), Gaps = 0/71 (0%)

Query  56   DLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTA  115
            + DS ++  L+DRGISF NP+AA+YNGK+VC N   G+TV ++V A +SS+PAL +    
Sbjct  144  EQDSAYIAALNDRGISFANPNAAIYNGKLVCENFRRGLTVDEIVAAFRSSNPALSNHARD  203

Query  116  YVAVSIRTYCP  126
            YV +S+RTYCP
Sbjct  204  YVDISMRTYCP  214


>gi|183981586|ref|YP_001849877.1| hypothetical protein MMAR_1570 [Mycobacterium marinum M]
 gi|183174912|gb|ACC40022.1| conserved hypothetical secreted protein [Mycobacterium marinum 
M]
Length=214

 Score = 91.3 bits (225),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 38/71 (54%), Positives = 53/71 (75%), Gaps = 0/71 (0%)

Query  56   DLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTA  115
            + DS ++  L+DRGISF NP+AA+YNGK+VC N   G+TV ++V A +SS+PAL +    
Sbjct  144  EQDSAYIAALNDRGISFANPNAAIYNGKLVCENFRRGLTVDEIVAAFRSSNPALSNHAGD  203

Query  116  YVAVSIRTYCP  126
            YV +S+RTYCP
Sbjct  204  YVDISMRTYCP  214


>gi|254820682|ref|ZP_05225683.1| hypothetical protein MintA_12176 [Mycobacterium intracellulare 
ATCC 13950]
Length=119

 Score = 63.5 bits (153),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 40/97 (42%), Positives = 52/97 (54%), Gaps = 4/97 (4%)

Query  34   PPAGLTTRSAPTAAPPSTLQSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGM  93
            P AGL   SA TA  P++  +   D  FL  L  +GI+F +P+A V +G  VC  L  G 
Sbjct  22   PVAGLL--SAMTA--PASAHATSADDAFLAALKAKGINFESPEAVVNSGHTVCHELDSGQ  77

Query  94   TVQQVVEALQSSSPALGDRTTAYVAVSIRTYCPKYDA  130
            T +QV   + SSS         +V VSI+ YCPKY A
Sbjct  78   TPEQVANNVLSSSSLDSYHAGYFVGVSIKAYCPKYAA  114


>gi|41409516|ref|NP_962352.1| hypothetical protein MAP3418 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398347|gb|AAS05968.1| hypothetical protein MAP_3418 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=149

 Score = 60.8 bits (146),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 32/73 (44%), Positives = 41/73 (57%), Gaps = 0/73 (0%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYV  117
            D  FL  L  +GI++ +PDAAV +G  VC  L  G T +QV   + SSS         +V
Sbjct  72   DDAFLAALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSYHAGYFV  131

Query  118  AVSIRTYCPKYDA  130
             VSI+ YCPKY A
Sbjct  132  GVSIKAYCPKYAA  144


>gi|336459617|gb|EGO38552.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=117

 Score = 60.5 bits (145),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 32/73 (44%), Positives = 41/73 (57%), Gaps = 0/73 (0%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYV  117
            D  FL  L  +GI++ +PDAAV +G  VC  L  G T +QV   + SSS         +V
Sbjct  40   DDAFLAALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSYHAGYFV  99

Query  118  AVSIRTYCPKYDA  130
             VSI+ YCPKY A
Sbjct  100  GVSIKAYCPKYAA  112


>gi|118466072|ref|YP_883411.1| hypothetical protein MAV_4271 [Mycobacterium avium 104]
 gi|254776706|ref|ZP_05218222.1| hypothetical protein MaviaA2_18846 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118167359|gb|ABK68256.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=117

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 32/73 (44%), Positives = 41/73 (57%), Gaps = 0/73 (0%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYV  117
            D  FL  L  +GI++ +PDAAV +G  VC  L  G T +QV   + SSS         +V
Sbjct  40   DDAFLAALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSYHAGYFV  99

Query  118  AVSIRTYCPKYDA  130
             VSI+ YCPKY A
Sbjct  100  GVSIKAYCPKYAA  112


>gi|342861513|ref|ZP_08718160.1| hypothetical protein MCOL_21611 [Mycobacterium colombiense CECT 
3035]
 gi|342131002|gb|EGT84291.1| hypothetical protein MCOL_21611 [Mycobacterium colombiense CECT 
3035]
Length=120

 Score = 59.7 bits (143),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 34/80 (43%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYV  117
            D  FL  L  +GI++ + DAAV +G  VC  L  G T +QV  ++ SSS         +V
Sbjct  41   DDAFLAALKAKGINYESADAAVNSGHTVCHELDMGQTPEQVANSVLSSSTLDSYHAGYFV  100

Query  118  AVSIRTYCPKY-DAVLPPGS  136
             VSI+ YCPKY DA    GS
Sbjct  101  GVSIKAYCPKYADAAASSGS  120


>gi|342858463|ref|ZP_08715118.1| hypothetical protein MCOL_06296 [Mycobacterium colombiense CECT 
3035]
 gi|342134167|gb|EGT87347.1| hypothetical protein MCOL_06296 [Mycobacterium colombiense CECT 
3035]
Length=115

 Score = 59.3 bits (142),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 29/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-DRTTAY  116
            D  F+ +LH  GISF++P  AV  GK VC ++G G  +  VV+ L S + AL  D+   +
Sbjct  26   DDSFIASLHAAGISFSDPGKAVGAGKWVCDSVGQGTQMPDVVKTLMSKNSALSEDKANQF  85

Query  117  VAVSIRTYCP  126
             A++  TYCP
Sbjct  86   AAIAATTYCP  95


>gi|296164795|ref|ZP_06847355.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295899849|gb|EFG79295.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=105

 Score = 58.2 bits (139),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 27/71 (39%), Positives = 44/71 (62%), Gaps = 1/71 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPAL-GDRTTAY  116
            ++ FL +L   GI++  PDAAV   K VC ++G G    Q+V  LQ+ +P L  D  T++
Sbjct  30   EASFLASLRSAGITYKTPDAAVQFAKAVCESMGNGEYGPQMVSELQAQNPGLTADHATSF  89

Query  117  VAVSIRTYCPK  127
            +A++ + YCP+
Sbjct  90   LAIAAKFYCPQ  100


>gi|296168904|ref|ZP_06850573.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295896373|gb|EFG76026.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=153

 Score = 57.8 bits (138),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 27/69 (40%), Positives = 40/69 (58%), Gaps = 0/69 (0%)

Query  61   FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAVS  120
            FL  L  +GI++ +P+ A+ +G +VC  L  G+  QQV   + ++S   G     +V VS
Sbjct  82   FLAALTAKGINYESPETAIRSGHLVCAQLDSGIAPQQVANDVMTNSHLDGYHAGYFVGVS  141

Query  121  IRTYCPKYD  129
            IR YCPKY 
Sbjct  142  IRAYCPKYS  150


>gi|342861289|ref|ZP_08717937.1| hypothetical protein MCOL_20496 [Mycobacterium colombiense CECT 
3035]
 gi|342131189|gb|EGT84470.1| hypothetical protein MCOL_20496 [Mycobacterium colombiense CECT 
3035]
Length=108

 Score = 57.0 bits (136),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 25/68 (37%), Positives = 44/68 (65%), Gaps = 1/68 (1%)

Query  61   FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPAL-GDRTTAYVAV  119
            FL +L   GI++  P+AA+   K VC ++G G    Q+V+ L+S +P L  +R T+++A+
Sbjct  36   FLASLRSAGITYATPEAAITFAKSVCVSMGDGEVGPQMVDELKSQNPELTNERATSFLAI  95

Query  120  SIRTYCPK  127
            + + YCP+
Sbjct  96   AAKYYCPQ  103


>gi|254823259|ref|ZP_05228260.1| hypothetical protein MintA_25239 [Mycobacterium intracellulare 
ATCC 13950]
Length=107

 Score = 56.6 bits (135),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 35/127 (28%), Positives = 59/127 (47%), Gaps = 28/127 (22%)

Query  2    LTVGVGIGAAILLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSVF  61
            L   +G+G +++LG   LAH  P   G                             ++ F
Sbjct  3    LLAALGVGVSVILGPTPLAHSDPGTTGGD---------------------------EAAF  35

Query  62   LGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPAL-GDRTTAYVAVS  120
            L +L   GI+++ PD AV   K VC ++  G    Q+V+ L+S +P L  D  T+++A++
Sbjct  36   LASLRGAGITYSTPDGAVKFAKAVCVSMANGELGPQMVDELKSQNPGLTDDHATSFLAIA  95

Query  121  IRTYCPK  127
             + YCP+
Sbjct  96   AKFYCPQ  102


>gi|118466065|ref|YP_882736.1| hypothetical protein MAV_3558 [Mycobacterium avium 104]
 gi|118167352|gb|ABK68249.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=122

 Score = 55.5 bits (132),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-DRTTAY  116
            D  F+ +L   GI + + D A   GK VCT L GG  +  VV  LQS +  L  D    +
Sbjct  34   DDAFVASLDKAGIKYGDADKAAGAGKWVCTTLQGGKQMSDVVSTLQSKNSNLSDDHANTF  93

Query  117  VAVSIRTYCPKYDAVLPPGS  136
             A+++  YCP   + + P S
Sbjct  94   AAIAVNAYCPDQASSITPAS  113


>gi|118466879|ref|YP_882536.1| hypothetical protein MAV_3354 [Mycobacterium avium 104]
 gi|118168166|gb|ABK69063.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=117

 Score = 55.1 bits (131),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 28/73 (39%), Positives = 44/73 (61%), Gaps = 1/73 (1%)

Query  56   DLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTA  115
            D + VF+ +LH  GISF +P  AV  GK VC  L  G++  Q++  L+ ++PAL     A
Sbjct  33   DNNEVFIADLHKVGISFQDPGQAVSAGKAVCGLLARGVSGLQLLNDLRDNNPALTTNGAA  92

Query  116  -YVAVSIRTYCPK  127
             +  +S ++YCP+
Sbjct  93   QFATISAKSYCPR  105


>gi|41407252|ref|NP_960088.1| hypothetical protein MAP1154 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395604|gb|AAS03471.1| hypothetical protein MAP_1154 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=117

 Score = 55.1 bits (131),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 28/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)

Query  54   SPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRT  113
            + D + VF+ +LH  GISF +P  AV  GK VC  L  G++  Q++  L+ ++PAL    
Sbjct  31   TDDNNEVFIADLHKVGISFQDPGQAVSAGKAVCGLLARGVSGLQLLNDLRDNNPALTTNG  90

Query  114  TA-YVAVSIRTYCPK  127
             A +  +S ++YCP+
Sbjct  91   AAQFATISAKSYCPR  105


>gi|15841274|ref|NP_336311.1| hypothetical protein MT1854 [Mycobacterium tuberculosis CDC1551]
 gi|13881502|gb|AAK46125.1| hypothetical protein MT1854 [Mycobacterium tuberculosis CDC1551]
Length=122

 Score = 54.3 bits (129),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 26/70 (38%), Positives = 41/70 (59%), Gaps = 1/70 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-DRTTAY  116
            D+VFL +L   GI++++PD A+ +GK VC  +  G +  QVV  L++ +P    D    +
Sbjct  42   DAVFLASLERAGITYSHPDQAIASGKAVCALVESGESGLQVVNELRTRNPGFSMDGCCKF  101

Query  117  VAVSIRTYCP  126
             A+S   YCP
Sbjct  102  AAISAHVYCP  111


>gi|167967401|ref|ZP_02549678.1| hypothetical protein MtubH3_04927 [Mycobacterium tuberculosis 
H37Ra]
 gi|254550813|ref|ZP_05141260.1| hypothetical protein Mtube_10201 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|298525300|ref|ZP_07012709.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 12 more sequence titles
 gi|308370827|ref|ZP_07422868.2| hypothetical protein TMCG_02841 [Mycobacterium tuberculosis SUMu003]
 gi|308373241|ref|ZP_07431546.2| hypothetical protein TMEG_01694 [Mycobacterium tuberculosis SUMu005]
 gi|308374404|ref|ZP_07435925.2| hypothetical protein TMFG_00883 [Mycobacterium tuberculosis SUMu006]
 gi|308375684|ref|ZP_07444752.2| hypothetical protein TMGG_00345 [Mycobacterium tuberculosis SUMu007]
 gi|308376828|ref|ZP_07440176.2| hypothetical protein TMHG_00976 [Mycobacterium tuberculosis SUMu008]
 gi|298495094|gb|EFI30388.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308330706|gb|EFP19557.1| hypothetical protein TMCG_02841 [Mycobacterium tuberculosis SUMu003]
 gi|308338357|gb|EFP27208.1| hypothetical protein TMEG_01694 [Mycobacterium tuberculosis SUMu005]
 gi|308342036|gb|EFP30887.1| hypothetical protein TMFG_00883 [Mycobacterium tuberculosis SUMu006]
 gi|308345548|gb|EFP34399.1| hypothetical protein TMGG_00345 [Mycobacterium tuberculosis SUMu007]
 gi|308349830|gb|EFP38681.1| hypothetical protein TMHG_00976 [Mycobacterium tuberculosis SUMu008]
 gi|323719682|gb|EGB28803.1| hypothetical protein TMMG_01062 [Mycobacterium tuberculosis CDC1551A]
Length=105

 Score = 54.3 bits (129),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 26/70 (38%), Positives = 41/70 (59%), Gaps = 1/70 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-DRTTAY  116
            D+VFL +L   GI++++PD A+ +GK VC  +  G +  QVV  L++ +P    D    +
Sbjct  25   DAVFLASLERAGITYSHPDQAIASGKAVCALVESGESGLQVVNELRTRNPGFSMDGCCKF  84

Query  117  VAVSIRTYCP  126
             A+S   YCP
Sbjct  85   AAISAHVYCP  94


>gi|340626814|ref|YP_004745266.1| hypothetical protein MCAN_18201 [Mycobacterium canettii CIPT 
140010059]
 gi|340005004|emb|CCC44152.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=108

 Score = 54.3 bits (129),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 26/70 (38%), Positives = 41/70 (59%), Gaps = 1/70 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-DRTTAY  116
            D+VFL +L   GI++++PD A+ +GK VC  +  G +  QVV  L++ +P    D    +
Sbjct  28   DAVFLASLERAGITYSHPDQAIASGKAVCALVESGESGLQVVNELRTRNPGFSMDGCCKF  87

Query  117  VAVSIRTYCP  126
             A+S   YCP
Sbjct  88   AAISAHVYCP  97


>gi|15608941|ref|NP_216320.1| hypothetical protein Rv1804c [Mycobacterium tuberculosis H37Rv]
 gi|31792993|ref|NP_855486.1| hypothetical protein Mb1833c [Mycobacterium bovis AF2122/97]
 gi|121637706|ref|YP_977929.1| hypothetical protein BCG_1837c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 59 more sequence titles
 gi|148661610|ref|YP_001283133.1| hypothetical protein MRA_1817 [Mycobacterium tuberculosis H37Ra]
 gi|148823018|ref|YP_001287772.1| hypothetical protein TBFG_11835 [Mycobacterium tuberculosis F11]
 gi|224990190|ref|YP_002644877.1| hypothetical protein JTY_1821 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253799154|ref|YP_003032155.1| hypothetical protein TBMG_02192 [Mycobacterium tuberculosis KZN 
1435]
 gi|254231988|ref|ZP_04925315.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254364634|ref|ZP_04980680.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289443278|ref|ZP_06433022.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289447419|ref|ZP_06437163.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289569876|ref|ZP_06450103.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289574482|ref|ZP_06454709.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289745764|ref|ZP_06505142.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289750375|ref|ZP_06509753.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289753899|ref|ZP_06513277.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289757907|ref|ZP_06517285.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289761954|ref|ZP_06521332.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294996716|ref|ZP_06802407.1| hypothetical protein Mtub2_19968 [Mycobacterium tuberculosis 
210]
 gi|297634363|ref|ZP_06952143.1| hypothetical protein MtubK4_09591 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731350|ref|ZP_06960468.1| hypothetical protein MtubKR_09691 [Mycobacterium tuberculosis 
KZN R506]
 gi|306776022|ref|ZP_07414359.1| hypothetical protein TMAG_01980 [Mycobacterium tuberculosis SUMu001]
 gi|306779806|ref|ZP_07418143.1| hypothetical protein TMBG_00336 [Mycobacterium tuberculosis SUMu002]
 gi|306788907|ref|ZP_07427229.1| hypothetical protein TMDG_03054 [Mycobacterium tuberculosis SUMu004]
 gi|306967898|ref|ZP_07480559.1| hypothetical protein TMIG_02045 [Mycobacterium tuberculosis SUMu009]
 gi|306972132|ref|ZP_07484793.1| hypothetical protein TMJG_00049 [Mycobacterium tuberculosis SUMu010]
 gi|307079842|ref|ZP_07489012.1| hypothetical protein TMKG_00053 [Mycobacterium tuberculosis SUMu011]
 gi|307084420|ref|ZP_07493533.1| hypothetical protein TMLG_01075 [Mycobacterium tuberculosis SUMu012]
 gi|313658684|ref|ZP_07815564.1| hypothetical protein MtubKV_09706 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339631857|ref|YP_004723499.1| hypothetical protein MAF_18260 [Mycobacterium africanum GM041182]
 gi|2924485|emb|CAA17725.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31618584|emb|CAD94536.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493353|emb|CAL71824.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124601047|gb|EAY60057.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134150148|gb|EBA42193.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148505762|gb|ABQ73571.1| hypothetical protein MRA_1817 [Mycobacterium tuberculosis H37Ra]
 gi|148721545|gb|ABR06170.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224773303|dbj|BAH26109.1| hypothetical protein JTY_1821 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253320657|gb|ACT25260.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289416197|gb|EFD13437.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289420377|gb|EFD17578.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289538913|gb|EFD43491.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289543630|gb|EFD47278.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289686292|gb|EFD53780.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289690962|gb|EFD58391.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289694486|gb|EFD61915.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289709460|gb|EFD73476.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289713471|gb|EFD77483.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308215516|gb|EFO74915.1| hypothetical protein TMAG_01980 [Mycobacterium tuberculosis SUMu001]
 gi|308327266|gb|EFP16117.1| hypothetical protein TMBG_00336 [Mycobacterium tuberculosis SUMu002]
 gi|308334574|gb|EFP23425.1| hypothetical protein TMDG_03054 [Mycobacterium tuberculosis SUMu004]
 gi|308354488|gb|EFP43339.1| hypothetical protein TMIG_02045 [Mycobacterium tuberculosis SUMu009]
 gi|308358392|gb|EFP47243.1| hypothetical protein TMJG_00049 [Mycobacterium tuberculosis SUMu010]
 gi|308362328|gb|EFP51179.1| hypothetical protein TMKG_00053 [Mycobacterium tuberculosis SUMu011]
 gi|308365980|gb|EFP54831.1| hypothetical protein TMLG_01075 [Mycobacterium tuberculosis SUMu012]
 gi|326903408|gb|EGE50341.1| hypothetical protein TBPG_01280 [Mycobacterium tuberculosis W-148]
 gi|328458909|gb|AEB04332.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339294742|gb|AEJ46853.1| hypothetical protein CCDC5079_1663 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298370|gb|AEJ50480.1| hypothetical protein CCDC5180_1643 [Mycobacterium tuberculosis 
CCDC5180]
 gi|339331213|emb|CCC26896.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341601733|emb|CCC64406.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344219626|gb|AEN00257.1| hypothetical protein MTCTRI2_1836 [Mycobacterium tuberculosis 
CTRI-2]
Length=108

 Score = 54.3 bits (129),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 26/70 (38%), Positives = 41/70 (59%), Gaps = 1/70 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-DRTTAY  116
            D+VFL +L   GI++++PD A+ +GK VC  +  G +  QVV  L++ +P    D    +
Sbjct  28   DAVFLASLERAGITYSHPDQAIASGKAVCALVESGESGLQVVNELRTRNPGFSMDGCCKF  87

Query  117  VAVSIRTYCP  126
             A+S   YCP
Sbjct  88   AAISAHVYCP  97


>gi|289554423|ref|ZP_06443633.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289439055|gb|EFD21548.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
Length=110

 Score = 54.3 bits (129),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 26/70 (38%), Positives = 41/70 (59%), Gaps = 1/70 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-DRTTAY  116
            D+VFL +L   GI++++PD A+ +GK VC  +  G +  QVV  L++ +P    D    +
Sbjct  30   DAVFLASLERAGITYSHPDQAIASGKAVCALVESGESGLQVVNELRTRNPGFSMDGCCKF  89

Query  117  VAVSIRTYCP  126
             A+S   YCP
Sbjct  90   AAISAHVYCP  99


>gi|254775796|ref|ZP_05217312.1| hypothetical protein MaviaA2_14160 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=115

 Score = 53.9 bits (128),  Expect = 8e-06, Method: Compositional matrix adjust.
 Identities = 29/72 (41%), Positives = 43/72 (60%), Gaps = 1/72 (1%)

Query  56   DLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTA  115
            D + VF+ +LH  GISF +P  AV  GK VC  L  G++  Q++  L+ ++PAL     A
Sbjct  33   DNNEVFIADLHKVGISFQDPGQAVSAGKAVCGLLARGVSGLQLLNDLRDNNPALTTNGAA  92

Query  116  YVAVSIRTYCPK  127
              A S ++YCP+
Sbjct  93   QFA-SAKSYCPR  103


>gi|333988948|ref|YP_004521562.1| hypothetical protein JDM601_0308 [Mycobacterium sp. JDM601]
 gi|333484916|gb|AEF34308.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=100

 Score = 53.9 bits (128),  Expect = 8e-06, Method: Compositional matrix adjust.
 Identities = 32/93 (35%), Positives = 51/93 (55%), Gaps = 8/93 (8%)

Query  36   AGLTTRSAPTAAPPSTLQSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTV  95
            AGL   +AP AA P        D+ FLG L   GIS+ NP  AV  G+ VC  +  G +V
Sbjct  14   AGLIGLAAPAAAEPG-------DAGFLGALDQMGISYPNPADAVAGGQAVCRYIAEGHSV  66

Query  96   QQVVEALQSSSPALG-DRTTAYVAVSIRTYCPK  127
             Q  + +++++P+L   + + +V ++  TYC +
Sbjct  67   NQAAKGVKNANPSLTLTKASQFVGIARATYCAE  99


>gi|333989793|ref|YP_004522407.1| hypothetical protein JDM601_1153 [Mycobacterium sp. JDM601]
 gi|333485761|gb|AEF35153.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=108

 Score = 53.1 bits (126),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 26/83 (32%), Positives = 44/83 (54%), Gaps = 1/83 (1%)

Query  45   TAAPPSTLQSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQS  104
             AA P+     D+D+ FL  L   GI++  PD A+   KMVC  +  G    +V++ L+ 
Sbjct  15   VAAGPAQADPADVDTDFLAALQAAGITYNRPDQAIVTAKMVCRFIAEGKPSPEVLDGLKE  74

Query  105  SSPAL-GDRTTAYVAVSIRTYCP  126
             +P L  +  + +V ++  +YCP
Sbjct  75   RNPGLTTEHGSMFVGIAAHSYCP  97


>gi|41408884|ref|NP_961720.1| hypothetical protein MAP2786c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|254776000|ref|ZP_05217516.1| hypothetical protein MaviaA2_15210 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|41397243|gb|AAS05103.1| hypothetical protein MAP_2786c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336458835|gb|EGO37792.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=114

 Score = 53.1 bits (126),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 26/70 (38%), Positives = 36/70 (52%), Gaps = 1/70 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-DRTTAY  116
            D  F+ +L   GI + + D A   GK VCT L GG  +  VV  LQS +  L  D    +
Sbjct  26   DDAFVASLDKAGIKYGDADKAAGAGKWVCTTLQGGKQMSDVVSTLQSKNSNLSDDHANTF  85

Query  117  VAVSIRTYCP  126
             A+++  YCP
Sbjct  86   AAIAVNAYCP  95


>gi|254823283|ref|ZP_05228284.1| hypothetical protein MintA_25369 [Mycobacterium intracellulare 
ATCC 13950]
Length=116

 Score = 52.8 bits (125),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 32/90 (36%), Positives = 50/90 (56%), Gaps = 3/90 (3%)

Query  40   TRSAPTAAPPSTLQSP--DLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQ  97
            T +AP  A P   ++P  D +  FL +LH  GISF +P  AV  GK VC  +  G++  Q
Sbjct  15   TLAAPAHATPGEDEAPADDNNGSFLSDLHTVGISFKDPGQAVAAGKSVCGMITRGVSGLQ  74

Query  98   VVEALQSSSPALGDRTTA-YVAVSIRTYCP  126
            ++  ++ ++PAL     A +  +S + YCP
Sbjct  75   LLTDIRDNNPALTTNGAAQFATISAKAYCP  104


>gi|118618122|ref|YP_906454.1| hypothetical protein MUL_2657 [Mycobacterium ulcerans Agy99]
 gi|118570232|gb|ABL04983.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=167

 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 27/79 (35%), Positives = 39/79 (50%), Gaps = 0/79 (0%)

Query  50   STLQSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPAL  109
            +T  +  +D  FL  +   GI+F +P AA+  G  VC  L  G     V   + +SS   
Sbjct  85   ATAHADAVDDAFLNAVRSHGINFASPQAAIMAGHQVCNALDSGRQKSDVAGDVAASSSLD  144

Query  110  GDRTTAYVAVSIRTYCPKY  128
            G R   +V VSI  YCP++
Sbjct  145  GYRAGYFVGVSIAAYCPRH  163


>gi|296171947|ref|ZP_06852992.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295893880|gb|EFG73652.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=130

 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 23/75 (31%), Positives = 40/75 (54%), Gaps = 1/75 (1%)

Query  53   QSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-D  111
             + D D  FLG+L+  G ++ +P   +  G  VC+  GGG  +  +  A+ S +PAL  +
Sbjct  41   HADDTDDAFLGSLNSAGFTYNDPGQVIQAGHYVCSAAGGGTAMADIATAMVSKAPALSQE  100

Query  112  RTTAYVAVSIRTYCP  126
            +   + A++   YCP
Sbjct  101  KAEKFTAIAASAYCP  115


>gi|254818543|ref|ZP_05223544.1| hypothetical protein MintA_01396 [Mycobacterium intracellulare 
ATCC 13950]
Length=111

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 26/70 (38%), Positives = 39/70 (56%), Gaps = 1/70 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGD-RTTAY  116
            D  F+ +L   GI+F + D AV  GK VC  +G G  +  VV+ L S + AL + +   +
Sbjct  32   DEAFIASLRAAGITFADSDKAVGAGKWVCDTVGQGTQMPDVVKTLLSKNSALSEGKANQF  91

Query  117  VAVSIRTYCP  126
             A++  TYCP
Sbjct  92   AAIAASTYCP  101


>gi|240173138|ref|ZP_04751796.1| hypothetical protein MkanA1_27746 [Mycobacterium kansasii ATCC 
12478]
Length=111

 Score = 51.6 bits (122),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 22/72 (31%), Positives = 37/72 (52%), Gaps = 0/72 (0%)

Query  61   FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAVS  120
            F+  +   G++F++P AAV  G  VCT L  G T  Q+   + S +     +   +V  +
Sbjct  39   FISQMESVGVTFSSPQAAVQEGHQVCTELAAGATGSQIASEILSQTNLTSKQAAYFVVYA  98

Query  121  IRTYCPKYDAVL  132
             + YCP+Y + L
Sbjct  99   TKDYCPQYASQL  110


>gi|296171949|ref|ZP_06852994.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295893882|gb|EFG73654.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=114

 Score = 51.6 bits (122),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 27/72 (38%), Positives = 39/72 (55%), Gaps = 1/72 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPAL-GDRTTAY  116
            D  FL +L D GI++ N D A+  GK VC  L  G +  ++V  L++ +PA  G     +
Sbjct  27   DQDFLTDLRDAGITYQNGDNAITIGKSVCELLDDGQSSAEIVTQLRNQNPAFQGASAAKF  86

Query  117  VAVSIRTYCPKY  128
              +S   YCPKY
Sbjct  87   TYLSAAHYCPKY  98


>gi|183981255|ref|YP_001849546.1| hypothetical protein MMAR_1233 [Mycobacterium marinum M]
 gi|183174581|gb|ACC39691.1| conserved hypothetical secreted protein [Mycobacterium marinum 
M]
Length=106

 Score = 51.6 bits (122),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 28/84 (34%), Positives = 40/84 (48%), Gaps = 0/84 (0%)

Query  45   TAAPPSTLQSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQS  104
            T    +T  +  +D  FL  +   GI+F +P AA+  G  VC  L  G     V   + +
Sbjct  19   TELATATAHADAVDDAFLNAVRSHGINFASPQAAIMAGHQVCNALDSGRQKSDVAGDVAA  78

Query  105  SSPALGDRTTAYVAVSIRTYCPKY  128
            SS   G R   +V VSI  YCP++
Sbjct  79   SSSLDGYRAGYFVGVSIAAYCPRH  102


>gi|118463814|ref|YP_882093.1| hypothetical protein MAV_2907 [Mycobacterium avium 104]
 gi|254775383|ref|ZP_05216899.1| hypothetical protein MaviaA2_12041 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118165101|gb|ABK65998.1| conserved hypothetical protein [Mycobacterium avium 104]
 gi|336457570|gb|EGO36575.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=102

 Score = 50.8 bits (120),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 44/75 (59%), Gaps = 2/75 (2%)

Query  55   PDLDSV-FLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPAL-GDR  112
            P +D   FL +L   GI +  P  A+   + VC ++G G +  Q+++ L+S +P L  D 
Sbjct  23   PGVDEAGFLASLRSAGIGYATPQGAIKFAQAVCVSMGNGESGPQLLDELKSQNPGLTNDH  82

Query  113  TTAYVAVSIRTYCPK  127
             T+++A++ + YCP+
Sbjct  83   ATSFLAIAAKYYCPQ  97


>gi|118619212|ref|YP_907544.1| hypothetical protein MUL_4013 [Mycobacterium ulcerans Agy99]
 gi|183984121|ref|YP_001852412.1| hypothetical protein MMAR_4150 [Mycobacterium marinum M]
 gi|118571322|gb|ABL06073.1| conserved hypothetical secreted rotein [Mycobacterium ulcerans 
Agy99]
 gi|183177447|gb|ACC42557.1| conserved hypothetical secreted rotein [Mycobacterium marinum 
M]
Length=110

 Score = 48.9 bits (115),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 37/75 (50%), Gaps = 0/75 (0%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYV  117
            D+ F+  +   G++F++P AA   G  VC  L  G T   + E + S +     +   +V
Sbjct  35   DTAFISQMESVGVTFSSPQAADREGHQVCQELASGKTGTDIAEEILSQTDLTSKQAAYFV  94

Query  118  AVSIRTYCPKYDAVL  132
              + + YCP+Y + L
Sbjct  95   VYATKDYCPQYASQL  109


>gi|254818542|ref|ZP_05223543.1| hypothetical protein MintA_01391 [Mycobacterium intracellulare 
ATCC 13950]
Length=114

 Score = 48.5 bits (114),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 26/74 (36%), Positives = 39/74 (53%), Gaps = 1/74 (1%)

Query  56   DLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPAL-GDRTT  114
            D D  FL +L D GI++ +   A+  GK VC  L  G +  ++V  L++ +PA  G    
Sbjct  25   DNDQDFLKDLRDAGITYQDAGNAITIGKSVCELLDDGQSDAKIVTDLRNQNPAFQGASAA  84

Query  115  AYVAVSIRTYCPKY  128
             +  +S   YCPKY
Sbjct  85   KFTFLSAAHYCPKY  98


>gi|118465355|ref|YP_882735.1| hypothetical protein MAV_3557 [Mycobacterium avium 104]
 gi|118166642|gb|ABK67539.1| conserved hypothetical protein [Mycobacterium avium 104]
 gi|336458836|gb|EGO37793.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=114

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 26/74 (36%), Positives = 39/74 (53%), Gaps = 1/74 (1%)

Query  56   DLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPAL-GDRTT  114
            D D  FL +L D GI++ +   A+  GK VC  L  G +  ++V  L++ +PA  G    
Sbjct  25   DNDQDFLKDLRDAGITYQDAGNAITIGKSVCELLDDGQSDAKIVTDLRNQNPAFQGASAA  84

Query  115  AYVAVSIRTYCPKY  128
             +  +S   YCPKY
Sbjct  85   KFTYLSAAHYCPKY  98


>gi|41408883|ref|NP_961719.1| hypothetical protein MAP2785c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41397242|gb|AAS05102.1| hypothetical protein MAP_2785c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=161

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 26/74 (36%), Positives = 39/74 (53%), Gaps = 1/74 (1%)

Query  56   DLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPAL-GDRTT  114
            D D  FL +L D GI++ +   A+  GK VC  L  G +  ++V  L++ +PA  G    
Sbjct  72   DNDQDFLKDLRDAGITYQDAGNAITIGKSVCELLDDGQSDAKIVTDLRNQNPAFQGASAA  131

Query  115  AYVAVSIRTYCPKY  128
             +  +S   YCPKY
Sbjct  132  KFTYLSAAHYCPKY  145


>gi|15608411|ref|NP_215787.1| hypothetical protein Rv1271c [Mycobacterium tuberculosis H37Rv]
 gi|31792463|ref|NP_854956.1| hypothetical protein Mb1302c [Mycobacterium bovis AF2122/97]
 gi|121637199|ref|YP_977422.1| hypothetical protein BCG_1330c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 80 more sequence titles
 gi|148661058|ref|YP_001282581.1| hypothetical protein MRA_1279 [Mycobacterium tuberculosis H37Ra]
 gi|148822488|ref|YP_001287242.1| hypothetical protein TBFG_11297 [Mycobacterium tuberculosis F11]
 gi|167969594|ref|ZP_02551871.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis 
H37Ra]
 gi|224989674|ref|YP_002644361.1| hypothetical secreted protein [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253799684|ref|YP_003032685.1| secreted protein [Mycobacterium tuberculosis KZN 1435]
 gi|254231528|ref|ZP_04924855.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis 
C]
 gi|254364168|ref|ZP_04980214.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis 
str. Haarlem]
 gi|254550277|ref|ZP_05140724.1| hypothetical protein Mtube_07434 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289442709|ref|ZP_06432453.1| conserved secreted protein [Mycobacterium tuberculosis T46]
 gi|289446865|ref|ZP_06436609.1| conserved secreted protein [Mycobacterium tuberculosis CPHL_A]
 gi|289554940|ref|ZP_06444150.1| conserved secreted protein [Mycobacterium tuberculosis KZN 605]
 gi|289569281|ref|ZP_06449508.1| conserved secreted protein [Mycobacterium tuberculosis T17]
 gi|289573933|ref|ZP_06454160.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289745016|ref|ZP_06504394.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289749823|ref|ZP_06509201.1| conserved secreted protein [Mycobacterium tuberculosis T92]
 gi|289753347|ref|ZP_06512725.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289757370|ref|ZP_06516748.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289761423|ref|ZP_06520801.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis 
GM 1503]
 gi|294994827|ref|ZP_06800518.1| hypothetical protein Mtub2_10032 [Mycobacterium tuberculosis 
210]
 gi|297633820|ref|ZP_06951600.1| hypothetical protein MtubK4_06844 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297730806|ref|ZP_06959924.1| hypothetical protein MtubKR_06929 [Mycobacterium tuberculosis 
KZN R506]
 gi|298524774|ref|ZP_07012183.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306775439|ref|ZP_07413776.1| conserved secreted protein [Mycobacterium tuberculosis SUMu001]
 gi|306781648|ref|ZP_07419985.1| conserved secreted protein [Mycobacterium tuberculosis SUMu002]
 gi|306783991|ref|ZP_07422313.1| conserved secreted protein [Mycobacterium tuberculosis SUMu003]
 gi|306788355|ref|ZP_07426677.1| conserved secreted protein [Mycobacterium tuberculosis SUMu004]
 gi|306792681|ref|ZP_07430983.1| conserved secreted protein [Mycobacterium tuberculosis SUMu005]
 gi|306797088|ref|ZP_07435390.1| conserved secreted protein [Mycobacterium tuberculosis SUMu006]
 gi|306802968|ref|ZP_07439636.1| conserved secreted protein [Mycobacterium tuberculosis SUMu008]
 gi|306807158|ref|ZP_07443826.1| conserved secreted protein [Mycobacterium tuberculosis SUMu007]
 gi|306967357|ref|ZP_07480018.1| conserved secreted protein [Mycobacterium tuberculosis SUMu009]
 gi|306971549|ref|ZP_07484210.1| conserved secreted protein [Mycobacterium tuberculosis SUMu010]
 gi|307079262|ref|ZP_07488432.1| conserved secreted protein [Mycobacterium tuberculosis SUMu011]
 gi|307083832|ref|ZP_07492945.1| conserved secreted protein [Mycobacterium tuberculosis SUMu012]
 gi|313658138|ref|ZP_07815018.1| hypothetical protein MtubKV_06944 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339631339|ref|YP_004722981.1| hypothetical protein MAF_12920 [Mycobacterium africanum GM041182]
 gi|340626286|ref|YP_004744738.1| hypothetical protein MCAN_12871 [Mycobacterium canettii CIPT 
140010059]
 gi|54040073|sp|P64794.1|Y1302_MYCBO RecName: Full=Uncharacterized protein Mb1302c; Flags: Precursor
 gi|54042504|sp|P64793.1|Y1271_MYCTU RecName: Full=Uncharacterized protein Rv1271c/MT1309; Flags: 
Precursor
 gi|1480315|emb|CAB00909.1| CONSERVED HYPOTHETICAL SECRETED PROTEIN [Mycobacterium tuberculosis 
H37Rv]
 gi|31618052|emb|CAD94163.1| CONSERVED HYPOTHETICAL SECRETED PROTEIN [Mycobacterium bovis 
AF2122/97]
 gi|121492846|emb|CAL71317.1| Conserved hypothetical secreted protein [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|124600587|gb|EAY59597.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis 
C]
 gi|134149682|gb|EBA41727.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis 
str. Haarlem]
 gi|148505210|gb|ABQ73019.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis 
H37Ra]
 gi|148721015|gb|ABR05640.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis 
F11]
 gi|224772787|dbj|BAH25593.1| hypothetical secreted protein [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253321187|gb|ACT25790.1| conserved secreted protein [Mycobacterium tuberculosis KZN 1435]
 gi|289415628|gb|EFD12868.1| conserved secreted protein [Mycobacterium tuberculosis T46]
 gi|289419823|gb|EFD17024.1| conserved secreted protein [Mycobacterium tuberculosis CPHL_A]
 gi|289439572|gb|EFD22065.1| conserved secreted protein [Mycobacterium tuberculosis KZN 605]
 gi|289538364|gb|EFD42942.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289543035|gb|EFD46683.1| conserved secreted protein [Mycobacterium tuberculosis T17]
 gi|289685544|gb|EFD53032.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289690410|gb|EFD57839.1| conserved secreted protein [Mycobacterium tuberculosis T92]
 gi|289693934|gb|EFD61363.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289708929|gb|EFD72945.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis 
GM 1503]
 gi|289712934|gb|EFD76946.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298494568|gb|EFI29862.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308216059|gb|EFO75458.1| conserved secreted protein [Mycobacterium tuberculosis SUMu001]
 gi|308325609|gb|EFP14460.1| conserved secreted protein [Mycobacterium tuberculosis SUMu002]
 gi|308331227|gb|EFP20078.1| conserved secreted protein [Mycobacterium tuberculosis SUMu003]
 gi|308335043|gb|EFP23894.1| conserved secreted protein [Mycobacterium tuberculosis SUMu004]
 gi|308338851|gb|EFP27702.1| conserved secreted protein [Mycobacterium tuberculosis SUMu005]
 gi|308342536|gb|EFP31387.1| conserved secreted protein [Mycobacterium tuberculosis SUMu006]
 gi|308346401|gb|EFP35252.1| conserved secreted protein [Mycobacterium tuberculosis SUMu007]
 gi|308350342|gb|EFP39193.1| conserved secreted protein [Mycobacterium tuberculosis SUMu008]
 gi|308354972|gb|EFP43823.1| conserved secreted protein [Mycobacterium tuberculosis SUMu009]
 gi|308358919|gb|EFP47770.1| conserved secreted protein [Mycobacterium tuberculosis SUMu010]
 gi|308362882|gb|EFP51733.1| conserved secreted protein [Mycobacterium tuberculosis SUMu011]
 gi|308366515|gb|EFP55366.1| conserved secreted protein [Mycobacterium tuberculosis SUMu012]
 gi|323720227|gb|EGB29326.1| secreted protein [Mycobacterium tuberculosis CDC1551A]
 gi|326902892|gb|EGE49825.1| conserved secreted protein [Mycobacterium tuberculosis W-148]
 gi|328459430|gb|AEB04853.1| conserved secreted protein [Mycobacterium tuberculosis KZN 4207]
 gi|339294253|gb|AEJ46364.1| hypothetical protein CCDC5079_1174 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339297893|gb|AEJ50003.1| hypothetical protein CCDC5180_1166 [Mycobacterium tuberculosis 
CCDC5180]
 gi|339330695|emb|CCC26364.1| conserved hypothetical secreted protein [Mycobacterium africanum 
GM041182]
 gi|340004476|emb|CCC43619.1| conserved hypothetical secreted protein [Mycobacterium canettii 
CIPT 140010059]
 gi|341601217|emb|CCC63890.1| conserved hypothetical secreted protein [Mycobacterium bovis 
BCG str. Moreau RDJ]
 gi|344219100|gb|AEM99730.1| hypothetical protein MTCTRI2_1302 [Mycobacterium tuberculosis 
CTRI-2]
Length=113

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 19/75 (26%), Positives = 37/75 (50%), Gaps = 0/75 (0%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYV  117
            D  F+  +   G++F++P  A    ++VC  L  G T  ++ E + S +     +   +V
Sbjct  38   DEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFV  97

Query  118  AVSIRTYCPKYDAVL  132
              + + YCP+Y + L
Sbjct  98   VDATKAYCPQYASQL  112


>gi|254775999|ref|ZP_05217515.1| hypothetical protein MaviaA2_15205 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=114

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 26/74 (36%), Positives = 39/74 (53%), Gaps = 1/74 (1%)

Query  56   DLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPAL-GDRTT  114
            D D  FL +L D GI++ +   A+  GK VC  L  G +  ++V  L++ +PA  G    
Sbjct  25   DNDQDFLKDLRDAGITYQDAGNAITIGKSVCELLDDGQSDAKIVTDLRNQNPAFQGASAA  84

Query  115  AYVAVSIRTYCPKY  128
             +  +S   YCPKY
Sbjct  85   KFTYLSAAHYCPKY  98


>gi|15840718|ref|NP_335755.1| hypothetical protein MT1309 [Mycobacterium tuberculosis CDC1551]
 gi|13880908|gb|AAK45569.1| hypothetical protein MT1309 [Mycobacterium tuberculosis CDC1551]
Length=115

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 19/75 (26%), Positives = 37/75 (50%), Gaps = 0/75 (0%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYV  117
            D  F+  +   G++F++P  A    ++VC  L  G T  ++ E + S +     +   +V
Sbjct  40   DEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFV  99

Query  118  AVSIRTYCPKYDAVL  132
              + + YCP+Y + L
Sbjct  100  VDATKAYCPQYASQL  114


>gi|326384601|ref|ZP_08206280.1| hypothetical protein SCNU_16753 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326196735|gb|EGD53930.1| hypothetical protein SCNU_16753 [Gordonia neofelifaecis NRRL 
B-59395]
Length=122

 Score = 47.8 bits (112),  Expect = 6e-04, Method: Compositional matrix adjust.
 Identities = 25/75 (34%), Positives = 43/75 (58%), Gaps = 2/75 (2%)

Query  60   VFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALGDRTTAYVAV  119
            V+LG +   G S+++ DAA+  GK  C++L  G ++  VV+ + S +   G +  A V  
Sbjct  42   VYLGIVKTSGASYSSDDAAIAAGKQACSDLSSGKSMVDVVDGMSSEAGGKG-QAAAIVGA  100

Query  120  SIRTYCP-KYDAVLP  133
            +I  +CP + D +LP
Sbjct  101  AIPAFCPDQKDKILP  115


>gi|240169301|ref|ZP_04747960.1| hypothetical protein MkanA1_08306 [Mycobacterium kansasii ATCC 
12478]
Length=102

 Score = 47.4 bits (111),  Expect = 6e-04, Method: Compositional matrix adjust.
 Identities = 23/71 (33%), Positives = 40/71 (57%), Gaps = 1/71 (1%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-DRTTAY  116
            D  FLG L D GI+++NP  AV +   +C NL  G +  Q V+ ++  +P +  D  + +
Sbjct  29   DVGFLGALQDAGITYSNPGHAVESAHAMCRNLHHGESGLQAVQQVKIQNPPIDLDTASRF  88

Query  117  VAVSIRTYCPK  127
              ++ + YCP+
Sbjct  89   AVIAAKYYCPE  99


>gi|240171347|ref|ZP_04750006.1| hypothetical protein MkanA1_18691 [Mycobacterium kansasii ATCC 
12478]
Length=118

 Score = 47.4 bits (111),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 27/92 (30%), Positives = 42/92 (46%), Gaps = 6/92 (6%)

Query  37   GLTTRSAPTAAPPSTLQSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQ  96
            GL   + PTA      ++  +D  FL  +  +GI+F +P AA+  G  VC  L  G    
Sbjct  28   GLAVVAIPTA------KADGIDDAFLNAVKAKGINFASPQAAILVGHQVCDELDLGRHKA  81

Query  97   QVVEALQSSSPALGDRTTAYVAVSIRTYCPKY  128
             +   L       G R   +V +S+  YCP++
Sbjct  82   DIANDLAKGGNLDGYRAGYFVGLSVAAYCPRH  113


>gi|111026930|ref|YP_708908.1| hypothetical protein RHA1_ro11103 [Rhodococcus jostii RHA1]
 gi|110825469|gb|ABH00750.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=162

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 29/78 (38%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query  58   DSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQV-VEALQSSSPALGDRTTAY  116
            D+VF+  + D GI+F+  DA V     +C     G T ++V  E LQ SS  L      Y
Sbjct  86   DAVFVEGMADEGIAFSTDDAGVGLAHHICGEFADGATFEEVAAEGLQHSS--LSAYEVGY  143

Query  117  V-AVSIRTYCPKYDAVLP  133
            V   S+  YCP+Y   LP
Sbjct  144  VIGGSVSVYCPQYTDQLP  161


>gi|296164250|ref|ZP_06846841.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900406|gb|EFG79821.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=96

 Score = 46.6 bits (109),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 27/83 (33%), Positives = 38/83 (46%), Gaps = 3/83 (3%)

Query  46   AAPPSTLQSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSS  105
            A P S  Q+   D  FL  L   GI FTN DAA+  G  VCT L    T   ++ +L   
Sbjct  12   ATPASADQT---DDDFLAALKKHGIVFTNRDAAIATGHRVCTGLDADQTPANLILSLVKD  68

Query  106  SPALGDRTTAYVAVSIRTYCPKY  128
            +         +   ++ +YCP+Y
Sbjct  69   TDLSAHVAGYFFGAAVNSYCPQY  91


>gi|183982693|ref|YP_001850984.1| hypothetical protein MMAR_2686 [Mycobacterium marinum M]
 gi|183176019|gb|ACC41129.1| conserved hypothetical membrane protein [Mycobacterium marinum 
M]
Length=106

 Score = 46.2 bits (108),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 28/88 (32%), Positives = 45/88 (52%), Gaps = 3/88 (3%)

Query  42   SAPTAAPPSTLQSPDLDSVFLGNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEA  101
            +AP  A P      D+   FL  L + GI+++NPD A+ + K VC  L GG +  ++V  
Sbjct  17   AAPAHAHPDEGGGDDVG--FLAALQNAGITYSNPDQAIGSAKAVCWCLDGGESGLELVHD  74

Query  102  LQSSSPALGDRTTAYVAVSIRT-YCPKY  128
            +++ +P       +  AV   T YCP +
Sbjct  75   VKTHNPGFNMEAASQFAVLAATYYCPHH  102



Lambda     K      H
   0.316    0.133    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128858389450


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40