BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3069
Length=132
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610206|ref|NP_217585.1| camphor resistance protein CrcB [My... 260 6e-68
gi|315445354|ref|YP_004078233.1| camphor resistance protein CrcB... 192 1e-47
gi|145224986|ref|YP_001135664.1| camphor resistance protein CrcB... 192 1e-47
gi|41409245|ref|NP_962081.1| camphor resistance protein CrcB [My... 191 4e-47
gi|254776392|ref|ZP_05217908.1| camphor resistance protein CrcB ... 190 5e-47
gi|118466730|ref|YP_883132.1| camphor resistance protein CrcB [M... 188 2e-46
gi|120402946|ref|YP_952775.1| camphor resistance protein CrcB [M... 184 3e-45
gi|296169256|ref|ZP_06850907.1| camphor resistance protein CrcB ... 184 3e-45
gi|342860967|ref|ZP_08717616.1| camphor resistance protein CrcB ... 182 2e-44
gi|118468559|ref|YP_886493.1| camphor resistance protein CrcB [M... 181 3e-44
gi|254820724|ref|ZP_05225725.1| camphor resistance protein CrcB ... 177 5e-43
gi|258654530|ref|YP_003203686.1| camphor resistance protein CrcB... 166 8e-40
gi|108798695|ref|YP_638892.1| camphor resistance protein CrcB [M... 164 5e-39
gi|240170666|ref|ZP_04749325.1| putative transmembrane protein [... 161 3e-38
gi|183981606|ref|YP_001849897.1| hypothetical protein MMAR_1590 ... 160 6e-38
gi|60280041|gb|AAX16381.1| unknown [uncultured murine large bowe... 93.2 1e-17
gi|329960725|ref|ZP_08299049.1| protein CrcB [Bacteroides fluxus... 92.4 2e-17
gi|284047199|ref|YP_003397539.1| Camphor resistance CrcB protein... 92.0 3e-17
gi|160889060|ref|ZP_02070063.1| hypothetical protein BACUNI_0148... 90.5 7e-17
gi|329955522|ref|ZP_08296430.1| protein CrcB [Bacteroides clarus... 90.1 1e-16
gi|167762615|ref|ZP_02434742.1| hypothetical protein BACSTE_0097... 88.2 4e-16
gi|227495089|ref|ZP_03925405.1| inner membrane protein [Actinomy... 87.8 5e-16
gi|218129897|ref|ZP_03458701.1| hypothetical protein BACEGG_0148... 87.4 7e-16
gi|84495297|ref|ZP_00994416.1| putative integral membrane protei... 85.5 2e-15
gi|89092931|ref|ZP_01165883.1| crcB protein domain protein [Ocea... 85.5 3e-15
gi|224538592|ref|ZP_03679131.1| hypothetical protein BACCELL_034... 85.1 3e-15
gi|261416339|ref|YP_003250022.1| CrcB protein [Fibrobacter succi... 84.7 4e-15
gi|218246276|ref|YP_002371647.1| CrcB protein [Cyanothece sp. PC... 83.6 9e-15
gi|257059323|ref|YP_003137211.1| CrcB protein [Cyanothece sp. PC... 83.6 1e-14
gi|189467775|ref|ZP_03016560.1| hypothetical protein BACINT_0416... 83.2 1e-14
gi|296268386|ref|YP_003651018.1| CrcB protein [Thermobispora bis... 82.0 3e-14
gi|319901528|ref|YP_004161256.1| camphor resistance protein CrcB... 81.6 4e-14
gi|219669286|ref|YP_002459721.1| CrcB protein [Desulfitobacteriu... 81.3 5e-14
gi|258541652|ref|YP_003187085.1| integral membrane protein CrcB ... 80.9 6e-14
gi|153807751|ref|ZP_01960419.1| hypothetical protein BACCAC_0203... 80.1 1e-13
gi|329115228|ref|ZP_08243983.1| Protein CrcB-like protein [Aceto... 80.1 1e-13
gi|145595042|ref|YP_001159339.1| camphor resistance CrcB protein... 80.1 1e-13
gi|89894843|ref|YP_518330.1| hypothetical protein DSY2097 [Desul... 79.7 1e-13
gi|159038272|ref|YP_001537525.1| camphor resistance CrcB protein... 79.7 1e-13
gi|226225849|ref|YP_002759955.1| CrcB protein [Gemmatimonas aura... 79.3 2e-13
gi|338738369|ref|YP_004675331.1| Protein CrcB [Hyphomicrobium sp... 79.3 2e-13
gi|253563486|ref|ZP_04840943.1| conserved hypothetical protein [... 79.3 2e-13
gi|150396241|ref|YP_001326708.1| camphor resistance protein CrcB... 79.0 2e-13
gi|299821502|ref|ZP_07053390.1| camphor resistance protein CrcB2... 79.0 2e-13
gi|265762645|ref|ZP_06091213.1| conserved hypothetical protein [... 79.0 2e-13
gi|53712482|ref|YP_098474.1| camphor resistance protein CrcB [Ba... 79.0 2e-13
gi|260588801|ref|ZP_05854714.1| CrcB protein [Blautia hansenii D... 78.6 3e-13
gi|331084444|ref|ZP_08333547.1| crcB protein [Lachnospiraceae ba... 78.2 3e-13
gi|292671001|ref|ZP_06604427.1| camphor resistance protein CrcB ... 78.2 4e-13
gi|336322105|ref|YP_004602073.1| Camphor resistance CrcB protein... 78.2 4e-13
>gi|15610206|ref|NP_217585.1| camphor resistance protein CrcB [Mycobacterium tuberculosis H37Rv]
gi|15842638|ref|NP_337675.1| camphor resistance protein CrcB [Mycobacterium tuberculosis CDC1551]
gi|31794248|ref|NP_856741.1| camphor resistance protein CrcB [Mycobacterium bovis AF2122/97]
82 more sequence titles
Length=132
Score = 260 bits (664), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/132 (99%), Positives = 132/132 (100%), Gaps = 0/132 (0%)
Query 1 VPNHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLL 60
+PNHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLL
Sbjct 1 MPNHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLL 60
Query 61 ERLPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHL 120
ERLPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHL
Sbjct 61 ERLPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHL 120
Query 121 ATVLVRRVRIRR 132
ATVLVRRVRIRR
Sbjct 121 ATVLVRRVRIRR 132
>gi|315445354|ref|YP_004078233.1| camphor resistance protein CrcB [Mycobacterium sp. Spyr1]
gi|315263657|gb|ADU00399.1| camphor resistance protein CrcB [Mycobacterium sp. Spyr1]
Length=131
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/127 (76%), Positives = 105/127 (83%), Gaps = 0/127 (0%)
Query 5 DYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLP 64
D RELAAVFAGGA+G LARAA LA DP RWPWPTFTVN+VGAFL+G F TRLLERLP
Sbjct 4 DRRELAAVFAGGAVGTLARAAFEELAAADPGRWPWPTFTVNIVGAFLLGVFVTRLLERLP 63
Query 65 LSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVL 124
+SSYRRP LGTGLCGGLTTFSTMQVETI M+EHGH LA Y SI +GL+AV+L TVL
Sbjct 64 VSSYRRPFLGTGLCGGLTTFSTMQVETIRMLEHGHHWLALGYVAASIAVGLVAVYLGTVL 123
Query 125 VRRVRIR 131
RRVR+R
Sbjct 124 TRRVRVR 130
>gi|145224986|ref|YP_001135664.1| camphor resistance protein CrcB [Mycobacterium gilvum PYR-GCK]
gi|145217472|gb|ABP46876.1| camphor resistance protein CrcB [Mycobacterium gilvum PYR-GCK]
Length=131
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/127 (76%), Positives = 105/127 (83%), Gaps = 0/127 (0%)
Query 5 DYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLP 64
D RELAAVFAGGA+G LARAA LA DP RWPWPTFTVN+VGAFL+G F TRLLERLP
Sbjct 4 DRRELAAVFAGGAVGTLARAAFEELAAADPGRWPWPTFTVNIVGAFLLGVFVTRLLERLP 63
Query 65 LSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVL 124
+SSYRRP LGTGLCGGLTTFSTMQVETI M+EHGH LA Y SI +GL+AV+L TVL
Sbjct 64 VSSYRRPFLGTGLCGGLTTFSTMQVETIRMLEHGHHWLALGYVAASIAVGLVAVYLGTVL 123
Query 125 VRRVRIR 131
RRVR+R
Sbjct 124 TRRVRVR 130
>gi|41409245|ref|NP_962081.1| camphor resistance protein CrcB [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|47605381|sp|P61392.1|CRCB1_MYCPA RecName: Full=Protein CrcB homolog 1
gi|41398065|gb|AAS05695.1| hypothetical protein MAP_3147 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459200|gb|EGO38145.1| Integral membrane protein possibly involved in chromosome condensation
[Mycobacterium avium subsp. paratuberculosis S397]
Length=132
Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/122 (85%), Positives = 110/122 (91%), Gaps = 0/122 (0%)
Query 3 NHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLER 62
HDYRELAAVFAGGALG+LARAALSALA DPA WPWPTFTVN+VGAFLVGYFTTRLLER
Sbjct 3 QHDYRELAAVFAGGALGSLARAALSALAAGDPASWPWPTFTVNIVGAFLVGYFTTRLLER 62
Query 63 LPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLAT 122
LP SSYRRPLLGTG CGGLTTFSTMQVET++M+EH HWGLAA Y++ SI GLLAVHLAT
Sbjct 63 LPTSSYRRPLLGTGFCGGLTTFSTMQVETLTMLEHHHWGLAAGYTLTSIAAGLLAVHLAT 122
Query 123 VL 124
L
Sbjct 123 KL 124
>gi|254776392|ref|ZP_05217908.1| camphor resistance protein CrcB [Mycobacterium avium subsp. avium
ATCC 25291]
Length=174
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/122 (85%), Positives = 110/122 (91%), Gaps = 0/122 (0%)
Query 3 NHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLER 62
HDYRELAAVFAGGALG+LARAALSALA DPA WPWPTFTVN+VGAFLVGYFTTRLLER
Sbjct 3 QHDYRELAAVFAGGALGSLARAALSALAAGDPASWPWPTFTVNIVGAFLVGYFTTRLLER 62
Query 63 LPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLAT 122
LP SSYRRPLLGTG CGGLTTFSTMQVET++M+EH HWGLAA Y++ SI GLLAVHLAT
Sbjct 63 LPTSSYRRPLLGTGFCGGLTTFSTMQVETLTMLEHHHWGLAAGYTLTSIAAGLLAVHLAT 122
Query 123 VL 124
L
Sbjct 123 KL 124
>gi|118466730|ref|YP_883132.1| camphor resistance protein CrcB [Mycobacterium avium 104]
gi|118168017|gb|ABK68914.1| putative CrcB protein 1 [Mycobacterium avium 104]
Length=132
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/122 (84%), Positives = 110/122 (91%), Gaps = 0/122 (0%)
Query 3 NHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLER 62
HDYRELAAVFAGGALG+LARAALSALA DPA WPWPTFTVN+VGAFLVGYFTTRLLER
Sbjct 3 QHDYRELAAVFAGGALGSLARAALSALAAGDPASWPWPTFTVNIVGAFLVGYFTTRLLER 62
Query 63 LPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLAT 122
LP SSYRRPLLGTG CGGLTTFSTMQVET++M+EH +WGLAA Y++ SI GLLAVHLAT
Sbjct 63 LPTSSYRRPLLGTGFCGGLTTFSTMQVETLTMLEHHYWGLAAGYTLTSIAAGLLAVHLAT 122
Query 123 VL 124
L
Sbjct 123 KL 124
>gi|120402946|ref|YP_952775.1| camphor resistance protein CrcB [Mycobacterium vanbaalenii PYR-1]
gi|119955764|gb|ABM12769.1| camphor resistance protein CrcB [Mycobacterium vanbaalenii PYR-1]
Length=131
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/116 (77%), Positives = 97/116 (84%), Gaps = 0/116 (0%)
Query 4 HDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERL 63
HD RELAAVFAGGALG LARA LA PDP RWPWPTFTVN+VGA L+G F TRLLERL
Sbjct 3 HDRRELAAVFAGGALGTLARAGFEELAAPDPGRWPWPTFTVNIVGALLLGVFVTRLLERL 62
Query 64 PLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVH 119
P+SSYRRP LGTGLCGGLTTFSTMQVET+ M+EHGH+GLAA Y+ SI GL AV+
Sbjct 63 PVSSYRRPFLGTGLCGGLTTFSTMQVETLKMVEHGHYGLAAGYTAGSIGAGLAAVY 118
>gi|296169256|ref|ZP_06850907.1| camphor resistance protein CrcB [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896080|gb|EFG75748.1| camphor resistance protein CrcB [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=131
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/128 (81%), Positives = 112/128 (88%), Gaps = 0/128 (0%)
Query 4 HDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERL 63
HDYRELAA+FAGG LG L RAA A+ DP WPWPTFTVN+VGAFLVGYFTTRLLERL
Sbjct 3 HDYRELAAIFAGGGLGTLGRAAFDAIVDRDPHHWPWPTFTVNIVGAFLVGYFTTRLLERL 62
Query 64 PLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATV 123
PLSSYRRPLLGTGLCGGLTTFSTMQVET+ M+EHGHW LA +Y+VVSI GLLAVHLAT
Sbjct 63 PLSSYRRPLLGTGLCGGLTTFSTMQVETLRMVEHGHWVLAGSYTVVSIVGGLLAVHLATK 122
Query 124 LVRRVRIR 131
+VRRVR+R
Sbjct 123 MVRRVRVR 130
>gi|342860967|ref|ZP_08717616.1| camphor resistance protein CrcB [Mycobacterium colombiense CECT
3035]
gi|342131411|gb|EGT84681.1| camphor resistance protein CrcB [Mycobacterium colombiense CECT
3035]
Length=132
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/122 (86%), Positives = 109/122 (90%), Gaps = 0/122 (0%)
Query 3 NHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLER 62
DYRELAAVFAGGALG+LARAALS LA DPA WPWPTFTVN+VGAFLVGYFTTRLLER
Sbjct 3 QRDYRELAAVFAGGALGSLARAALSTLAGADPASWPWPTFTVNIVGAFLVGYFTTRLLER 62
Query 63 LPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLAT 122
LP SSYRRPLLGTGLCGGLTTFSTMQVET+ M+EHGHWGLA Y+V SI LGLLAVHLAT
Sbjct 63 LPTSSYRRPLLGTGLCGGLTTFSTMQVETLRMLEHGHWGLAVGYTVTSIALGLLAVHLAT 122
Query 123 VL 124
L
Sbjct 123 KL 124
>gi|118468559|ref|YP_886493.1| camphor resistance protein CrcB [Mycobacterium smegmatis str.
MC2 155]
gi|118169846|gb|ABK70742.1| putative CrcB protein [Mycobacterium smegmatis str. MC2 155]
Length=132
Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/130 (76%), Positives = 106/130 (82%), Gaps = 0/130 (0%)
Query 3 NHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLER 62
HD RELAAVF GGALG LARA L L PDP RWPWPTF VN+VGAFL+GYFTTRLLER
Sbjct 3 RHDPRELAAVFVGGALGTLARAGLETLMAPDPGRWPWPTFAVNIVGAFLLGYFTTRLLER 62
Query 63 LPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLAT 122
LP+SSYRRPLLGTG CGGLTTFSTMQVETI MIEHGH GLAA Y+ S+ G++AV AT
Sbjct 63 LPVSSYRRPLLGTGFCGGLTTFSTMQVETIGMIEHGHVGLAAGYTAASLAAGVVAVAGAT 122
Query 123 VLVRRVRIRR 132
LVRR R+ R
Sbjct 123 ALVRRARVLR 132
>gi|254820724|ref|ZP_05225725.1| camphor resistance protein CrcB [Mycobacterium intracellulare
ATCC 13950]
Length=132
Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/122 (85%), Positives = 107/122 (88%), Gaps = 0/122 (0%)
Query 3 NHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLER 62
DYRELAAVFAGGALG+LARAALS LA P WPWPTFTVN+VGAFLVGYFTTRLLER
Sbjct 3 QRDYRELAAVFAGGALGSLARAALSDLAGGHPESWPWPTFTVNIVGAFLVGYFTTRLLER 62
Query 63 LPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLAT 122
LP SSYRRPLLGTGLCGGLTTFSTMQVET+ MIEHGHWGLA Y+V SI LGLLAVHLAT
Sbjct 63 LPTSSYRRPLLGTGLCGGLTTFSTMQVETVRMIEHGHWGLAVGYTVASIVLGLLAVHLAT 122
Query 123 VL 124
L
Sbjct 123 KL 124
>gi|258654530|ref|YP_003203686.1| camphor resistance protein CrcB [Nakamurella multipartita DSM
44233]
gi|258557755|gb|ACV80697.1| Camphor resistance CrcB protein [Nakamurella multipartita DSM
44233]
Length=152
Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 85/131 (65%), Positives = 98/131 (75%), Gaps = 0/131 (0%)
Query 1 VPNHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLL 60
+P+ D RELAA+F GGALG LARA LS + P +WPW TF VNVV A L+GYF TRL
Sbjct 21 LPSLDRRELAAIFVGGALGTLARAGLSQVLPHSPTQWPWATFVVNVVAAALLGYFVTRLQ 80
Query 61 ERLPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHL 120
ERLPLSSYRRPLLGTG+CGGL+TFSTMQVE + MIE + LA Y+V S+ G A+HL
Sbjct 81 ERLPLSSYRRPLLGTGVCGGLSTFSTMQVEILRMIEASAFVLALGYTVASVVAGYAAIHL 140
Query 121 ATVLVRRVRIR 131
T VRRVRIR
Sbjct 141 TTAAVRRVRIR 151
>gi|108798695|ref|YP_638892.1| camphor resistance protein CrcB [Mycobacterium sp. MCS]
gi|119867813|ref|YP_937765.1| camphor resistance protein CrcB [Mycobacterium sp. KMS]
gi|126434296|ref|YP_001069987.1| camphor resistance protein CrcB [Mycobacterium sp. JLS]
gi|108769114|gb|ABG07836.1| camphor resistance protein CrcB [Mycobacterium sp. MCS]
gi|119693902|gb|ABL90975.1| camphor resistance protein CrcB [Mycobacterium sp. KMS]
gi|126234096|gb|ABN97496.1| camphor resistance protein CrcB [Mycobacterium sp. JLS]
Length=132
Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/132 (77%), Positives = 110/132 (84%), Gaps = 0/132 (0%)
Query 1 VPNHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLL 60
+P D RELAAVF GGALG LARA LA PDP RWPWPTFTVN+VGAFL+GYFTTRLL
Sbjct 1 MPRFDGRELAAVFVGGALGTLARAGFEELAAPDPGRWPWPTFTVNIVGAFLLGYFTTRLL 60
Query 61 ERLPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHL 120
ERLP+SSYRRPLLGTGLCGGLTTFSTMQVET+ M+EHGH GLAA Y+ S+ GL AV +
Sbjct 61 ERLPVSSYRRPLLGTGLCGGLTTFSTMQVETVRMLEHGHVGLAAGYTAASLAAGLAAVLV 120
Query 121 ATVLVRRVRIRR 132
AT LVRR RIRR
Sbjct 121 ATALVRRARIRR 132
>gi|240170666|ref|ZP_04749325.1| putative transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=132
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/120 (89%), Positives = 113/120 (95%), Gaps = 0/120 (0%)
Query 3 NHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLER 62
HDYRELAA+FAGGALGALARAAL+ LA+PDPARWPWPTFTVN+VGAFLVGYFTTRLLER
Sbjct 3 RHDYRELAAIFAGGALGALARAALATLAVPDPARWPWPTFTVNIVGAFLVGYFTTRLLER 62
Query 63 LPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLAT 122
LPLSSYRRPLLGTGLCGGLTTFSTMQVET+ M+EHGHW LA AY+VVSI LGLLAV LAT
Sbjct 63 LPLSSYRRPLLGTGLCGGLTTFSTMQVETVRMLEHGHWVLAVAYTVVSIVLGLLAVQLAT 122
>gi|183981606|ref|YP_001849897.1| hypothetical protein MMAR_1590 [Mycobacterium marinum M]
gi|183174932|gb|ACC40042.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=131
Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/118 (87%), Positives = 111/118 (95%), Gaps = 0/118 (0%)
Query 5 DYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLP 64
DYRELAA+FAGGALGALARAALS LA+PDPA+WPWPTFTVN+VGAFLVGYFTTRLLERLP
Sbjct 5 DYRELAAIFAGGALGALARAALSTLAVPDPAKWPWPTFTVNIVGAFLVGYFTTRLLERLP 64
Query 65 LSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLAT 122
LSSYRRPLLGTGLCGGLTTFSTMQVET+ MIE+GHW LA Y++VS+T GLLAV LAT
Sbjct 65 LSSYRRPLLGTGLCGGLTTFSTMQVETLKMIEYGHWALALVYTLVSVTFGLLAVKLAT 122
>gi|60280041|gb|AAX16381.1| unknown [uncultured murine large bowel bacterium BAC 31B]
Length=131
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/113 (46%), Positives = 73/113 (65%), Gaps = 3/113 (2%)
Query 7 RELAAVFAGGALGALARAALSALAIPD--PARWPWPTFTVNVVGAFLVGYFTTRLLERLP 64
R L A+F GG G++ R + + P +PW TFTVN++G+FL+G F T L R
Sbjct 3 RLLIAIFLGGGTGSVLRYCMQMMLHERIVPYSFPWTTFTVNILGSFLIGLFYT-LSTRFN 61
Query 65 LSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLA 117
LS+ R LL TGLCGG TTFST + + +I+ G +G+ A Y+++S+TLG+LA
Sbjct 62 LSTEVRLLLTTGLCGGFTTFSTFSNDGLILIKQGFYGIFALYTLLSLTLGVLA 114
>gi|329960725|ref|ZP_08299049.1| protein CrcB [Bacteroides fluxus YIT 12057]
gi|328532440|gb|EGF59238.1| protein CrcB [Bacteroides fluxus YIT 12057]
Length=164
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (44%), Positives = 75/114 (66%), Gaps = 5/114 (4%)
Query 7 RELAAVFAGGALGALARAALSALAIPD---PARWPWPTFTVNVVGAFLVGYFTTRLLERL 63
+EL A+F GG +G++ R + +A+ + P +PW TFTVN++G+FL+G F + L R
Sbjct 42 KELIAIFLGGGIGSVLRYCVQ-MALHERIIPYSFPWATFTVNILGSFLIGLFYS-LSARF 99
Query 64 PLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLA 117
LS+ R LL TGLCGG TTFST + + MI+ G +G+ Y+++SI LG+ A
Sbjct 100 NLSTEVRMLLTTGLCGGFTTFSTFSNDGLIMIKQGFYGMFILYTLLSIILGITA 153
>gi|284047199|ref|YP_003397539.1| Camphor resistance CrcB protein [Conexibacter woesei DSM 14684]
gi|283951420|gb|ADB54164.1| Camphor resistance CrcB protein [Conexibacter woesei DSM 14684]
Length=140
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/106 (54%), Positives = 65/106 (62%), Gaps = 1/106 (0%)
Query 1 VPNHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLL 60
+P D R L AVFAGGALG LARA L DPA WPW TF VNV GA L+ TRL
Sbjct 2 LPRLDLRVLLAVFAGGALGTLARAGLEEAFAHDPASWPWATFAVNVAGAALLALAITRLP 61
Query 61 ERLPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAY 106
R S++ R G GLCGGLTTFST Q+E + M++ GLA Y
Sbjct 62 SR-HRSAHVRAFAGPGLCGGLTTFSTFQLELVRMLDADRVGLALGY 106
>gi|160889060|ref|ZP_02070063.1| hypothetical protein BACUNI_01480 [Bacteroides uniformis ATCC
8492]
gi|270293827|ref|ZP_06200029.1| crcB protein [Bacteroides sp. D20]
gi|317479336|ref|ZP_07938471.1| CrcB-like protein [Bacteroides sp. 4_1_36]
gi|156861527|gb|EDO54958.1| hypothetical protein BACUNI_01480 [Bacteroides uniformis ATCC
8492]
gi|270275294|gb|EFA21154.1| crcB protein [Bacteroides sp. D20]
gi|290770101|gb|ADD61862.1| putative protein [uncultured organism]
gi|316904624|gb|EFV26443.1| CrcB-like protein [Bacteroides sp. 4_1_36]
Length=125
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/113 (46%), Positives = 72/113 (64%), Gaps = 3/113 (2%)
Query 7 RELAAVFAGGALGALARAALSALAIPD--PARWPWPTFTVNVVGAFLVGYFTTRLLERLP 64
R L A+F GG G++ R + + P +PW TFTVN++G+FL+G F T L R
Sbjct 3 RLLIAIFLGGGTGSVLRYCVQMMLHERIVPYSFPWATFTVNILGSFLIGLFYT-LSARFN 61
Query 65 LSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLA 117
LS+ R LL TGLCGG TTFST + + +I+ +G+ A Y+++SITLG+LA
Sbjct 62 LSTEVRLLLTTGLCGGFTTFSTFSNDGLILIKQEFYGMFALYTLLSITLGVLA 114
>gi|329955522|ref|ZP_08296430.1| protein CrcB [Bacteroides clarus YIT 12056]
gi|328525925|gb|EGF52949.1| protein CrcB [Bacteroides clarus YIT 12056]
Length=140
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/121 (43%), Positives = 75/121 (62%), Gaps = 5/121 (4%)
Query 7 RELAAVFAGGALGALARAALSALAIPD---PARWPWPTFTVNVVGAFLVGYFTTRLLERL 63
+ L A+F GG G++ R + +A+ + P +PW TF VN++G+FL+G F L R
Sbjct 18 KILIAIFLGGGTGSVLRYC-TQMALHERIVPYSFPWATFAVNIIGSFLIGLFYA-LSARF 75
Query 64 PLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATV 123
LS+ R LL TGLCGG TTFST + + +I+ G +GL A Y+++SI LG AV ++
Sbjct 76 NLSTEVRMLLTTGLCGGFTTFSTFSNDGLMLIKQGFYGLFALYTLLSILLGFFAVLGGSI 135
Query 124 L 124
L
Sbjct 136 L 136
>gi|167762615|ref|ZP_02434742.1| hypothetical protein BACSTE_00971 [Bacteroides stercoris ATCC
43183]
gi|167699721|gb|EDS16300.1| hypothetical protein BACSTE_00971 [Bacteroides stercoris ATCC
43183]
Length=125
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/121 (43%), Positives = 74/121 (62%), Gaps = 5/121 (4%)
Query 7 RELAAVFAGGALGALARAALSALAIPD---PARWPWPTFTVNVVGAFLVGYFTTRLLERL 63
+ L A+F GG G++ R + +A+ + P +PW TF VN++G FL+G F L R
Sbjct 3 KILIAIFLGGGTGSVLRYCVQ-MALHEWIVPYSFPWATFAVNIIGGFLIGLFYV-LSARF 60
Query 64 PLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATV 123
LS+ R LL TGLCGG TTFST + + +I+ G +GL A Y+++SI LG+ AV +
Sbjct 61 NLSAEVRMLLTTGLCGGFTTFSTFSNDGLILIKQGFYGLFALYTLLSILLGIFAVWGGNI 120
Query 124 L 124
L
Sbjct 121 L 121
>gi|227495089|ref|ZP_03925405.1| inner membrane protein [Actinomyces coleocanis DSM 15436]
gi|226831541|gb|EEH63924.1| inner membrane protein [Actinomyces coleocanis DSM 15436]
Length=121
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/107 (45%), Positives = 66/107 (62%), Gaps = 1/107 (0%)
Query 11 AVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLSSYRR 70
AV AGG +GA R +S ++IP +PW TF +N++G FL+ +F L+ R L
Sbjct 7 AVGAGGFIGAALRYLIS-VSIPYRGGFPWATFGINMLGTFLLAFFAQVLVVRWGLGETAS 65
Query 71 PLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLA 117
L GLCGG TTFST +ET++++E+G WG A Y VSI GL+A
Sbjct 66 LALRVGLCGGFTTFSTFSLETLTLVENGQWGTAVIYVTVSIIFGLVA 112
>gi|218129897|ref|ZP_03458701.1| hypothetical protein BACEGG_01480 [Bacteroides eggerthii DSM
20697]
gi|317476882|ref|ZP_07936125.1| CrcB-like protein [Bacteroides eggerthii 1_2_48FAA]
gi|217988007|gb|EEC54332.1| hypothetical protein BACEGG_01480 [Bacteroides eggerthii DSM
20697]
gi|316907057|gb|EFV28768.1| CrcB-like protein [Bacteroides eggerthii 1_2_48FAA]
Length=125
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/114 (44%), Positives = 71/114 (63%), Gaps = 5/114 (4%)
Query 7 RELAAVFAGGALGALARAALSALAIPD---PARWPWPTFTVNVVGAFLVGYFTTRLLERL 63
+ L AVF GG G+L R + +A+ + P +PW TF VN+ G+FL+G F L R
Sbjct 3 KILIAVFLGGGTGSLLRYCVQ-MALHERIVPYSFPWATFAVNITGSFLIGLFYA-LSARF 60
Query 64 PLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLA 117
LS+ R LL TGLCGG TTFST + + +++ G +GL A Y+++SI LG+ A
Sbjct 61 NLSTEVRMLLTTGLCGGFTTFSTFSNDGLILMKQGFYGLFATYTLLSILLGIFA 114
>gi|84495297|ref|ZP_00994416.1| putative integral membrane protein [Janibacter sp. HTCC2649]
gi|84384790|gb|EAQ00670.1| putative integral membrane protein [Janibacter sp. HTCC2649]
Length=130
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/120 (42%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Query 7 RELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLS 66
R+LA V GGALGA++R A+ A WPW TF+VNV+ + +G R +
Sbjct 6 RDLALVAVGGALGAISRYAVGTAVPHSAAGWPWATFSVNVIASLAIGVLAGWAYWRHA-A 64
Query 67 SYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVLVR 126
+ RPLL +G GG +TFS V+T+++ E GH GLAAAY VV++ + AV + TV+ +
Sbjct 65 HWVRPLLMSGFLGGFSTFSAFAVDTVALTESGHGGLAAAYVVVTLVACVGAVGMGTVVAQ 124
>gi|89092931|ref|ZP_01165883.1| crcB protein domain protein [Oceanospirillum sp. MED92]
gi|89082956|gb|EAR62176.1| crcB protein domain protein [Oceanospirillum sp. MED92]
Length=123
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/113 (46%), Positives = 68/113 (61%), Gaps = 0/113 (0%)
Query 7 RELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLS 66
+ L A+ GGALGAL R +S L R P+ T T NVVG+FL+G +LE+ LS
Sbjct 2 QHLIAIAIGGALGALGRYWVSGLLNNAEHRIPYGTLTCNVVGSFLMGICFVLILEKSRLS 61
Query 67 SYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVH 119
RPLL G G TTFST +ETI+M++ GH AA Y +S+ L L+A++
Sbjct 62 PEMRPLLMVGFMGAFTTFSTFSLETIAMLQEGHVMSAAIYISLSVLLCLIALY 114
>gi|224538592|ref|ZP_03679131.1| hypothetical protein BACCELL_03486 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519801|gb|EEF88906.1| hypothetical protein BACCELL_03486 [Bacteroides cellulosilyticus
DSM 14838]
Length=131
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/113 (42%), Positives = 67/113 (60%), Gaps = 3/113 (2%)
Query 7 RELAAVFAGGALGALARAALSALAIPD--PARWPWPTFTVNVVGAFLVGYFTTRLLERLP 64
+EL +F GG G++ R + L P +PW TFTVN+ G+FL+G F L R
Sbjct 2 KELIYIFLGGGTGSVLRYYVQELLHERIIPYSFPWATFTVNIFGSFLIGLFYA-LSARFN 60
Query 65 LSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLA 117
S R LL G CGG TTFST + +++++ G +G AY+++SITLG+LA
Sbjct 61 FSPEMRLLLTAGFCGGFTTFSTFSNDGLTLLKGGFYGTFIAYTLISITLGILA 113
>gi|261416339|ref|YP_003250022.1| CrcB protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261372795|gb|ACX75540.1| CrcB protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302326435|gb|ADL25636.1| crcB protein [Fibrobacter succinogenes subsp. succinogenes S85]
Length=122
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/104 (42%), Positives = 63/104 (61%), Gaps = 1/104 (0%)
Query 15 GGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLSSYRRPLLG 74
GGALG++ R +S L IP A +PWPTF N++G +G F+ L+ LS + L
Sbjct 9 GGALGSVLRYFMS-LVIPKVAGFPWPTFVANILGCLCIGIFSGLFLKCDSLSPNLKLFLV 67
Query 75 TGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAV 118
TG CGG TTFST E +++++ G +G+ AY++ S LG+ A
Sbjct 68 TGFCGGFTTFSTFASENLALLQSGKFGMFIAYALASFVLGVAAC 111
>gi|218246276|ref|YP_002371647.1| CrcB protein [Cyanothece sp. PCC 8801]
gi|218166754|gb|ACK65491.1| CrcB protein [Cyanothece sp. PCC 8801]
Length=126
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/124 (36%), Positives = 68/124 (55%), Gaps = 2/124 (1%)
Query 5 DYRELAAVFAGGALGALARAALSALAIPD-PARWPWPTFTVNVVGAFLVGYFTTRLLERL 63
+Y + VF GG LG+ +R +S + + +PW TFTVN++G FL+G F +++R
Sbjct 3 NYLQFLIVFLGGGLGSCSRYVVSKVISSQLESIFPWGTFTVNIIGCFLIGIFI-GMIQRF 61
Query 64 PLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATV 123
LL TG CGG TTFS+ E ++++ + L Y+ +S+ G A LA
Sbjct 62 QFHPNLTVLLVTGFCGGFTTFSSFSYENYLLLKNSEYLLGLLYTFMSLCWGFAATFLAIF 121
Query 124 LVRR 127
L+RR
Sbjct 122 LIRR 125
>gi|257059323|ref|YP_003137211.1| CrcB protein [Cyanothece sp. PCC 8802]
gi|256589489|gb|ACV00376.1| CrcB protein [Cyanothece sp. PCC 8802]
Length=126
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/124 (36%), Positives = 68/124 (55%), Gaps = 2/124 (1%)
Query 5 DYRELAAVFAGGALGALARAALSALAIPD-PARWPWPTFTVNVVGAFLVGYFTTRLLERL 63
+Y + VF GG LG+ +R +S + + +PW TFTVN++G FL+G F +++R
Sbjct 3 NYLQFLIVFLGGGLGSCSRYVVSKVISNQLESIFPWGTFTVNIIGCFLIGIFI-GMIQRF 61
Query 64 PLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATV 123
LL TG CGG TTFS+ E ++++ + L Y+ +S+ G A LA
Sbjct 62 QFHPNLTVLLVTGFCGGFTTFSSFSYENYLLLKNSEYLLGLLYTFMSLCWGFAATFLAIF 121
Query 124 LVRR 127
L+RR
Sbjct 122 LIRR 125
>gi|189467775|ref|ZP_03016560.1| hypothetical protein BACINT_04167 [Bacteroides intestinalis DSM
17393]
gi|189436039|gb|EDV05024.1| hypothetical protein BACINT_04167 [Bacteroides intestinalis DSM
17393]
Length=124
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/113 (40%), Positives = 69/113 (62%), Gaps = 3/113 (2%)
Query 7 RELAAVFAGGALGALARAALSALAIPD--PARWPWPTFTVNVVGAFLVGYFTTRLLERLP 64
+ +F GG LG++ R ++ + P +PW TFTVN++G+FL+G F R
Sbjct 3 KTFIFIFLGGGLGSVLRFSVQQMLHERIVPYSFPWATFTVNILGSFLIGLFYAWS-ARFN 61
Query 65 LSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLA 117
L++ R LL TGLCGG TTFST + + +++ G +GL Y ++SITLG++A
Sbjct 62 LATEYRVLLTTGLCGGFTTFSTFSNDGVILLKQGLYGLFFTYFILSITLGVIA 114
>gi|296268386|ref|YP_003651018.1| CrcB protein [Thermobispora bispora DSM 43833]
gi|296091173|gb|ADG87125.1| CrcB protein [Thermobispora bispora DSM 43833]
Length=166
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/122 (41%), Positives = 68/122 (56%), Gaps = 3/122 (2%)
Query 2 PNHDYRELAAVFAGGALGALARAALSALAIP-DPARWPWPTFTVNVVGAFLVGYFTTRLL 60
P + LA + GG +G++AR L+ AIP P +PW TF VNV G +G ++
Sbjct 27 PARTWDVLAVIGLGGGIGSVARH-LAGAAIPAHPYGFPWATFLVNVTGCLAIGGLMA-VV 84
Query 61 ERLPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHL 120
+ LP Y RP G GL GG TTFST E ++++ HG W +A Y++ SI GL AV L
Sbjct 85 DALPGRRYLRPFTGVGLLGGYTTFSTYANELVTLVHHGAWAVAGGYALGSILAGLAAVRL 144
Query 121 AT 122
Sbjct 145 GK 146
>gi|319901528|ref|YP_004161256.1| camphor resistance protein CrcB [Bacteroides helcogenes P 36-108]
gi|319416559|gb|ADV43670.1| camphor resistance protein CrcB [Bacteroides helcogenes P 36-108]
Length=125
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/113 (39%), Positives = 66/113 (59%), Gaps = 3/113 (2%)
Query 7 RELAAVFAGGALGALARAALSALAIPD--PARWPWPTFTVNVVGAFLVGYFTTRLLERLP 64
+EL +F GG +G++ R + + P +PW T TVN++G+F +G F L R
Sbjct 3 KELICIFLGGGIGSVLRYCVQMILHNRIIPYSFPWATLTVNIIGSFCIGLFYA-LSARFS 61
Query 65 LSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLA 117
LS+ R L TGLCGG TTFST + + ++ G +G Y ++S+TLG++A
Sbjct 62 LSAETRMLFTTGLCGGFTTFSTFSNDALIILRQGCYGTFLLYILLSVTLGIIA 114
>gi|219669286|ref|YP_002459721.1| CrcB protein [Desulfitobacterium hafniense DCB-2]
gi|219539546|gb|ACL21285.1| CrcB protein [Desulfitobacterium hafniense DCB-2]
Length=124
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/114 (38%), Positives = 68/114 (60%), Gaps = 1/114 (0%)
Query 16 GALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLSSYRRPLLGT 75
G GA+ R + D +R+PW T T+N++G+FL+ + T+ + +++ LS + +GT
Sbjct 10 GMFGAMLRYLIGISFFAD-SRFPWATLTINLLGSFLLAWLTSYVFKKVRLSPHLSTAIGT 68
Query 76 GLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVLVRRVR 129
G G TTFST+ VETIS+ + GH LA Y +VS+ GL HL + + V+
Sbjct 69 GFVGSFTTFSTLSVETISLFQDGHNFLAMVYVLVSLLGGLTMSHLGFKVSKEVQ 122
>gi|258541652|ref|YP_003187085.1| integral membrane protein CrcB [Acetobacter pasteurianus IFO
3283-01]
gi|256632730|dbj|BAH98705.1| integral membrane protein CrcB [Acetobacter pasteurianus IFO
3283-01]
gi|256635787|dbj|BAI01756.1| integral membrane protein CrcB [Acetobacter pasteurianus IFO
3283-03]
6 more sequence titles
Length=144
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/121 (42%), Positives = 70/121 (58%), Gaps = 3/121 (2%)
Query 12 VFAGGALGALARAALSALAIPDPARWPWPTFT-VNVVGAFLVGYFTTRLLE--RLPLSSY 68
V GGALG LAR +S L P PW T VN+VG+F++G+F T L R P+S
Sbjct 9 VMLGGALGTLARYFVSVLTAPISRYIPWGTIIGVNMVGSFVIGFFGTLTLASGRYPVSET 68
Query 69 RRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVLVRRV 128
R + G+CGG TTFS+ ++T+ +I G WG A V+S+TL + AV + +L R+
Sbjct 69 TRLFVMLGICGGYTTFSSFSLQTLDLIRVGGWGRALVNVVLSVTLSVGAVAVGHMLASRM 128
Query 129 R 129
Sbjct 129 N 129
>gi|153807751|ref|ZP_01960419.1| hypothetical protein BACCAC_02034 [Bacteroides caccae ATCC 43185]
gi|149129360|gb|EDM20574.1| hypothetical protein BACCAC_02034 [Bacteroides caccae ATCC 43185]
Length=125
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/114 (41%), Positives = 64/114 (57%), Gaps = 3/114 (2%)
Query 7 RELAAVFAGGALGALARAALSALAIPD--PARWPWPTFTVNVVGAFLVGYFTTRLLERLP 64
+E+ +F GG G+ R + L P +PW TFTVN+ G+FL+G F L ER
Sbjct 3 KEIIYIFLGGGTGSALRYCIQLLMHERIVPYNFPWATFTVNIFGSFLIGLFYA-LSERFH 61
Query 65 LSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAV 118
L R L TGLCGG TTFST + I +++ +G Y+++SI +GL AV
Sbjct 62 LPFEVRLFLTTGLCGGFTTFSTFSSDGIGLLKGEFYGTFITYTLLSIAIGLTAV 115
>gi|329115228|ref|ZP_08243983.1| Protein CrcB-like protein [Acetobacter pomorum DM001]
gi|326695671|gb|EGE47357.1| Protein CrcB-like protein [Acetobacter pomorum DM001]
Length=144
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/121 (41%), Positives = 69/121 (58%), Gaps = 3/121 (2%)
Query 12 VFAGGALGALARAALSALAIPDPARWPWPTFT-VNVVGAFLVGYFTTRLLE--RLPLSSY 68
V GGALG LAR +S L P PW T VN+VG+F++G+F T L R P+S
Sbjct 9 VMVGGALGTLARYFVSVLTAPISRYIPWGTIIGVNMVGSFVIGFFGTLTLASGRYPVSET 68
Query 69 RRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVLVRRV 128
R + G+CGG TTFS+ ++T+ +I G WG A V+S+ L + AV + +L R+
Sbjct 69 TRLFVMLGICGGYTTFSSFSLQTLDLIRVGGWGRALVNVVLSVALSVGAVAMGHMLASRM 128
Query 129 R 129
Sbjct 129 N 129
>gi|145595042|ref|YP_001159339.1| camphor resistance CrcB protein [Salinispora tropica CNB-440]
gi|145304379|gb|ABP54961.1| camphor resistance protein CrcB [Salinispora tropica CNB-440]
Length=167
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/90 (52%), Positives = 55/90 (62%), Gaps = 0/90 (0%)
Query 1 VPNHDYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLL 60
+P H LAAV AGG LGALARA LSA+ DPA +P PTF VN+ G L+G L
Sbjct 24 LPTHPAAVLAAVSAGGVLGALARAGLSAVLPSDPAGFPVPTFAVNLSGCLLIGVLMAVLA 83
Query 61 ERLPLSSYRRPLLGTGLCGGLTTFSTMQVE 90
+R + RP LG G+ GG TTF+T VE
Sbjct 84 KRANPPALARPFLGVGVLGGYTTFATHAVE 113
>gi|89894843|ref|YP_518330.1| hypothetical protein DSY2097 [Desulfitobacterium hafniense Y51]
gi|116243196|sp|Q24VQ6.1|CRCB1_DESHY RecName: Full=Protein CrcB homolog 1
gi|89334291|dbj|BAE83886.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length=114
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/112 (38%), Positives = 67/112 (60%), Gaps = 1/112 (0%)
Query 18 LGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLSSYRRPLLGTGL 77
GA+ R + D +R+PW T T+N++G+FL+ + T+ + +++ LS + +GTG
Sbjct 2 FGAMLRYLIGISFFAD-SRFPWATLTINLLGSFLLAWLTSYVFKKVRLSPHLSTAIGTGF 60
Query 78 CGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVLVRRVR 129
G TTFST+ VETIS+ + GH LA Y +VS+ GL HL + + V+
Sbjct 61 VGSFTTFSTLSVETISLFQDGHNFLAMVYVLVSLLGGLTMSHLGFKVSKEVQ 112
>gi|159038272|ref|YP_001537525.1| camphor resistance CrcB protein [Salinispora arenicola CNS-205]
gi|157917107|gb|ABV98534.1| Camphor resistance CrcB protein [Salinispora arenicola CNS-205]
Length=169
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/115 (47%), Positives = 64/115 (56%), Gaps = 0/115 (0%)
Query 14 AGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLSSYRRPLL 73
AGG LGALARA LSA DPA +PWPTF VN+ G L+G L R S+ RP L
Sbjct 37 AGGVLGALARAGLSAALPHDPAGFPWPTFAVNLSGCLLIGVLMAVLAGRTGSSALTRPFL 96
Query 74 GTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVLVRRV 128
G G+ GG TTF+T VE + G A AY V ++T LLAV + R+
Sbjct 97 GVGVLGGYTTFATHAVEARQLAATGAATTAMAYLVATLTGALLAVWVGYTATERL 151
>gi|226225849|ref|YP_002759955.1| CrcB protein [Gemmatimonas aurantiaca T-27]
gi|226089040|dbj|BAH37485.1| CrcB protein [Gemmatimonas aurantiaca T-27]
Length=131
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/116 (43%), Positives = 65/116 (57%), Gaps = 9/116 (7%)
Query 15 GGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLSSYRRPLL- 73
GGALG++AR + L +P +P T VNVVGAFL+G F RL L+S LL
Sbjct 16 GGALGSVARYTVGVLLLPASGGFPTGTLVVNVVGAFLIGCF-----ARLTLTSESDQLLR 70
Query 74 ---GTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVLVR 126
TG CGG TTFS + ETI++++ G A Y V S+ LGL A L ++ +
Sbjct 71 LALTTGFCGGFTTFSALSAETIALMQQGRTARAGLYVVSSLVLGLGATALGYLITK 126
>gi|338738369|ref|YP_004675331.1| Protein CrcB [Hyphomicrobium sp. MC1]
gi|337758932|emb|CCB64757.1| Protein CrcB homolog [Hyphomicrobium sp. MC1]
Length=143
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/116 (38%), Positives = 66/116 (57%), Gaps = 2/116 (1%)
Query 5 DYRELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLE--R 62
++ V GGA+G L R A S LA+P PW T +N+ G+F++G+F T L R
Sbjct 2 NFTTCLVVMFGGAIGTLCRYAGSYLALPISGTLPWGTILINIAGSFIIGFFGTLTLAHGR 61
Query 63 LPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAV 118
P+S R + G+CGG TTFS+ ++T+ ++ G G AA +S+ L +LAV
Sbjct 62 YPVSEEFRLFVMVGICGGFTTFSSFSLQTLDLLRSGAIGRAAINIGLSVVLCILAV 117
>gi|253563486|ref|ZP_04840943.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251947262|gb|EES87544.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length=127
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/110 (38%), Positives = 69/110 (63%), Gaps = 7/110 (6%)
Query 7 RELAAVFAGGALGALARAALSALAIPD---PARWPWP--TFTVNVVGAFLVGYFTTRLLE 61
+E+ +F GG +G++ R L+ +A+ + PA +P+P TF VN++G+ L+G+F + E
Sbjct 2 KEIIYIFIGGGMGSVTRY-LTQIAVNERLSPALFPFPWGTFAVNIIGSLLIGFFYS-FSE 59
Query 62 RLPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSI 111
R LS R L G CGG TTFST+ +++S+++ G +G+ Y +SI
Sbjct 60 RFNLSFELRLFLTVGFCGGFTTFSTLTNDSLSLLKGGFYGIFTFYVFISI 109
>gi|150396241|ref|YP_001326708.1| camphor resistance protein CrcB [Sinorhizobium medicae WSM419]
gi|150027756|gb|ABR59873.1| CrcB protein [Sinorhizobium medicae WSM419]
Length=128
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/125 (40%), Positives = 69/125 (56%), Gaps = 3/125 (2%)
Query 4 HDYRELAAVFAGGALGALAR--AALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLE 61
H + V AGGALG++ R L L PA +PW T VNV G+FL+G+ ++
Sbjct 2 HGIGNILLVGAGGALGSILRYLVGLWMLQRAGPA-FPWGTLFVNVTGSFLIGFLAELIMH 60
Query 62 RLPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLA 121
R+ S++ R L TGL GG TTFS ++ I+++EHG AY S+ L +LAV
Sbjct 61 RMGASAHMRLFLITGLLGGYTTFSAFSLDAITLVEHGQPATGLAYMAASVVLSILAVFAG 120
Query 122 TVLVR 126
L+R
Sbjct 121 LALMR 125
>gi|299821502|ref|ZP_07053390.1| camphor resistance protein CrcB2 [Listeria grayi DSM 20601]
gi|299817167|gb|EFI84403.1| camphor resistance protein CrcB2 [Listeria grayi DSM 20601]
Length=130
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/117 (40%), Positives = 66/117 (57%), Gaps = 2/117 (1%)
Query 16 GALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLSSYRRPLLGT 75
GALG +AR +S + +PD +PW T VN+VG+FL+G+ + L R S +GT
Sbjct 11 GALGGMARYGVSVI-VPD-GLFPWHTLIVNLVGSFLLGFAVSYLQSRKIFSQAFISGIGT 68
Query 76 GLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVLVRRVRIRR 132
G G TTFST +ETI ++E GH LA Y ++S GL+ + R++ RR
Sbjct 69 GFIGTFTTFSTFSMETIQLLEAGHVALAMTYGIISAVAGLVLAFYGFSISARLQRRR 125
>gi|265762645|ref|ZP_06091213.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263255253|gb|EEZ26599.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length=127
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/110 (38%), Positives = 69/110 (63%), Gaps = 7/110 (6%)
Query 7 RELAAVFAGGALGALARAALSALAIPD---PARWPWP--TFTVNVVGAFLVGYFTTRLLE 61
+E+ +F GG +G++ R L+ +A+ + PA +P+P TF VN++G+ L+G+F + E
Sbjct 2 KEIIYIFIGGGMGSVTRY-LTQIAVNERLNPALFPFPWGTFAVNIIGSLLIGFFYS-FSE 59
Query 62 RLPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSI 111
R LS R L G CGG TTFST+ +++S+++ G +G+ Y +SI
Sbjct 60 RFNLSFELRLFLTVGFCGGFTTFSTLANDSLSLLKGGFYGIFTFYVFISI 109
>gi|53712482|ref|YP_098474.1| camphor resistance protein CrcB [Bacteroides fragilis YCH46]
gi|60680682|ref|YP_210826.1| camphor resistance protein CrcB [Bacteroides fragilis NCTC 9343]
gi|336408710|ref|ZP_08589201.1| CrcB [Bacteroides sp. 2_1_56FAA]
gi|68565468|sp|Q64X36.1|CRCB_BACFR RecName: Full=Protein CrcB homolog
gi|81316250|sp|Q5LG62.1|CRCB_BACFN RecName: Full=Protein CrcB homolog
gi|52215347|dbj|BAD47940.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|60492116|emb|CAH06879.1| putative transmembrane camphor resistance and chromosome condensation
CrcB homologue [Bacteroides fragilis NCTC 9343]
gi|335935931|gb|EGM97879.1| CrcB [Bacteroides sp. 2_1_56FAA]
Length=127
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/110 (38%), Positives = 69/110 (63%), Gaps = 7/110 (6%)
Query 7 RELAAVFAGGALGALARAALSALAIPD---PARWPWP--TFTVNVVGAFLVGYFTTRLLE 61
+E+ +F GG +G++ R L+ +A+ + PA +P+P TF VN++G+ L+G+F + E
Sbjct 2 KEIIYIFIGGGMGSVTRY-LTQIAVNERLSPALFPFPWGTFAVNIIGSLLIGFFYS-FSE 59
Query 62 RLPLSSYRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSI 111
R LS R L G CGG TTFST+ +++S+++ G +G+ Y +SI
Sbjct 60 RFNLSFELRLFLTVGFCGGFTTFSTLANDSLSLLKGGFYGIFTFYVFISI 109
>gi|260588801|ref|ZP_05854714.1| CrcB protein [Blautia hansenii DSM 20583]
gi|260540884|gb|EEX21453.1| CrcB protein [Blautia hansenii DSM 20583]
Length=112
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/111 (40%), Positives = 65/111 (59%), Gaps = 0/111 (0%)
Query 15 GGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLSSYRRPLLG 74
GG LGA AR LS + + D + +PW TF +N GAFL+G + ++ SS L
Sbjct 2 GGFLGAAARYLLSLIPVQDKSGFPWNTFFINAAGAFLIGCISAFAAKKGIGSSSLILFLK 61
Query 75 TGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVLV 125
TG+CGG TTFST +E+ ++E+G L+ Y + S+ + L AV LA ++
Sbjct 62 TGVCGGFTTFSTFALESYVLMENGKGVLSVIYMIASVLVCLGAVMLAQKII 112
>gi|331084444|ref|ZP_08333547.1| crcB protein [Lachnospiraceae bacterium 6_1_63FAA]
gi|330401540|gb|EGG81124.1| crcB protein [Lachnospiraceae bacterium 6_1_63FAA]
Length=120
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/111 (40%), Positives = 65/111 (59%), Gaps = 0/111 (0%)
Query 15 GGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLSSYRRPLLG 74
GG LGA AR LS + + D + +PW TF +N GAFL+G + ++ SS L
Sbjct 10 GGFLGAAARYLLSLIPVQDKSGFPWNTFFINAAGAFLIGCISAFAAKKGIGSSSLILFLK 69
Query 75 TGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVLV 125
TG+CGG TTFST +E+ ++E+G L+ Y + S+ + L AV LA ++
Sbjct 70 TGVCGGFTTFSTFALESYVLMENGKGVLSVIYMIASVLVCLGAVMLAQKII 120
>gi|292671001|ref|ZP_06604427.1| camphor resistance protein CrcB [Selenomonas noxia ATCC 43541]
gi|292647318|gb|EFF65290.1| camphor resistance protein CrcB [Selenomonas noxia ATCC 43541]
Length=123
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/119 (37%), Positives = 67/119 (57%), Gaps = 0/119 (0%)
Query 8 ELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLSS 67
+ AV GGA+GAL R L + +P+ TF+VN++G F++G + L
Sbjct 2 NIFAVGLGGAIGALCRYFLGQFIPKLGSGFPFGTFSVNLIGCFMIGAIVGFVGRNSGLGP 61
Query 68 YRRPLLGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATVLVR 126
L TG+CGG TTFST +ET+S++E G + +A Y V+S+ G+LA+ +A V
Sbjct 62 RLVLFLQTGICGGFTTFSTFSLETVSLLEEGKFVVAVLYIVLSVVFGILALLMAKYFVN 120
>gi|336322105|ref|YP_004602073.1| Camphor resistance CrcB protein [Cellvibrio gilvus ATCC 13127]
gi|336105686|gb|AEI13505.1| Camphor resistance CrcB protein [Cellvibrio gilvus ATCC 13127]
Length=144
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/126 (41%), Positives = 64/126 (51%), Gaps = 4/126 (3%)
Query 7 RELAAVFAGGALGALARAALSALAIPDPARWPWPTFTVNVVGAFLVGYFTTRLLERLPLS 66
R + VFAGGALG R + P WPW TF +NVVG+F++G RL P
Sbjct 16 RLVGLVFAGGALGTALRWVIEE-TWARPTGWPWATFVINVVGSFVLGALLERLARGGPDV 74
Query 67 SYRRPL---LGTGLCGGLTTFSTMQVETISMIEHGHWGLAAAYSVVSITLGLLAVHLATV 123
RR + GTG+ GG TT+ST +E + G A AY V S+ LG+LA
Sbjct 75 GRRRAVRLACGTGVLGGFTTYSTFVLEVERLASDGELARAFAYPVASVVLGVLAAGAGMT 134
Query 124 LVRRVR 129
L RR R
Sbjct 135 LARRAR 140
Lambda K H
0.327 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130990493970
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40