BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3072c
Length=174
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610209|ref|NP_217588.1| hypothetical protein Rv3072c [Mycob... 344 3e-93
gi|298526544|ref|ZP_07013953.1| conserved hypothetical protein [... 340 4e-92
gi|15842642|ref|NP_337679.1| hypothetical protein MT3157 [Mycoba... 337 5e-91
gi|167969677|ref|ZP_02551954.1| hypothetical protein MtubH3_1729... 325 1e-87
gi|340628064|ref|YP_004746516.1| hypothetical protein MCAN_30981... 273 8e-72
gi|296169253|ref|ZP_06850904.1| possible oxidoreductase [Mycobac... 170 7e-41
gi|118471087|ref|YP_887142.1| hydride transferase 1 [Mycobacteri... 165 2e-39
gi|240170662|ref|ZP_04749321.1| oxidoreductase [Mycobacterium ka... 165 3e-39
gi|111023509|ref|YP_706481.1| hydride transferase [Rhodococcus j... 164 4e-39
gi|54025259|ref|YP_119501.1| hypothetical protein nfa32900 [Noca... 160 5e-38
gi|345013663|ref|YP_004816017.1| putative F420-dependent oxidore... 156 1e-36
gi|183981602|ref|YP_001849893.1| oxidoreductase [Mycobacterium m... 153 1e-35
gi|118618754|ref|YP_907086.1| oxidoreductase [Mycobacterium ulce... 151 4e-35
gi|226366011|ref|YP_002783794.1| oxidoreductase [Rhodococcus opa... 149 1e-34
gi|315445765|ref|YP_004078644.1| flavin-dependent oxidoreductase... 142 1e-32
gi|145225417|ref|YP_001136095.1| luciferase family protein [Myco... 132 2e-29
gi|300785118|ref|YP_003765409.1| luciferase-like monooxygenase [... 90.5 9e-17
gi|226308574|ref|YP_002768534.1| oxidoreductase [Rhodococcus ery... 89.4 2e-16
gi|240172014|ref|ZP_04750673.1| hypothetical protein MkanA1_2205... 87.0 1e-15
gi|342861317|ref|ZP_08717965.1| hypothetical protein MCOL_20636 ... 86.7 1e-15
gi|169627470|ref|YP_001701119.1| hypothetical protein MAB_0366 [... 85.9 2e-15
gi|111222953|ref|YP_713747.1| putative alkanesulfonate monooxyge... 85.9 2e-15
gi|229488341|ref|ZP_04382207.1| luciferase family protein [Rhodo... 85.5 2e-15
gi|271965582|ref|YP_003339778.1| coenzyme F420-dependent N5 N10-... 85.5 3e-15
gi|254480180|ref|ZP_05093428.1| Luciferase-like monooxygenase su... 83.6 1e-14
gi|86738882|ref|YP_479282.1| luciferase-like protein [Frankia sp... 82.8 2e-14
gi|288921640|ref|ZP_06415910.1| Luciferase-like monooxygenase [F... 82.0 3e-14
gi|336457645|gb|EGO36649.1| putative oxidoreductase, Rv2161c fam... 82.0 3e-14
gi|41407597|ref|NP_960433.1| hypothetical protein MAP1499c [Myco... 81.6 4e-14
gi|119715094|ref|YP_922059.1| luciferase family protein [Nocardi... 81.3 5e-14
gi|119868953|ref|YP_938905.1| luciferase family protein [Mycobac... 81.3 5e-14
gi|108799843|ref|YP_640040.1| luciferase-like protein [Mycobacte... 80.9 7e-14
gi|254820284|ref|ZP_05225285.1| hypothetical protein MintA_10166... 80.5 8e-14
gi|126435486|ref|YP_001071177.1| luciferase family protein [Myco... 80.5 8e-14
gi|118466263|ref|YP_882121.1| hypothetical protein MAV_2935 [Myc... 80.5 8e-14
gi|111022786|ref|YP_705758.1| hypothetical protein RHA1_ro05823 ... 80.5 9e-14
gi|254775409|ref|ZP_05216925.1| hypothetical protein MaviaA2_121... 80.5 1e-13
gi|158314154|ref|YP_001506662.1| luciferase family protein [Fran... 80.1 1e-13
gi|297182086|gb|ADI18259.1| coenzyme f420-dependent n5,n10-methy... 80.1 1e-13
gi|226365294|ref|YP_002783077.1| oxidoreductase [Rhodococcus opa... 78.6 3e-13
gi|312197054|ref|YP_004017115.1| F420-dependent oxidoreductase [... 78.6 3e-13
gi|269127718|ref|YP_003301088.1| luciferase-like monooxygenase [... 77.0 8e-13
gi|262198764|ref|YP_003269973.1| luciferase-like protein [Halian... 77.0 9e-13
gi|312199356|ref|YP_004019417.1| F420-dependent oxidoreductase [... 77.0 9e-13
gi|296164772|ref|ZP_06847334.1| luciferase family protein [Mycob... 74.7 5e-12
gi|221633550|ref|YP_002522776.1| putative monooxygenase [Thermom... 73.6 9e-12
gi|311896166|dbj|BAJ28574.1| hypothetical protein KSE_27630 [Kit... 71.2 5e-11
gi|269925517|ref|YP_003322140.1| Luciferase-like monooxygenase [... 71.2 5e-11
gi|226364191|ref|YP_002781973.1| hypothetical protein ROP_47810 ... 70.1 1e-10
gi|256391176|ref|YP_003112740.1| Luciferase-like monooxygenase [... 70.1 1e-10
>gi|15610209|ref|NP_217588.1| hypothetical protein Rv3072c [Mycobacterium tuberculosis H37Rv]
gi|31794251|ref|NP_856744.1| hypothetical protein Mb3099c [Mycobacterium bovis AF2122/97]
gi|121638957|ref|YP_979181.1| hypothetical protein BCG_3097c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
33 more sequence titles
Length=174
Score = 344 bits (882), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/174 (99%), Positives = 174/174 (100%), Gaps = 0/174 (0%)
Query 1 LACVRRSCDVTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPY 60
+ACVRRSCDVTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPY
Sbjct 1 MACVRRSCDVTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPY 60
Query 61 SRDGVIAVPAQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSG 120
SRDGVIAVPAQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSG
Sbjct 61 SRDGVIAVPAQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSG 120
Query 121 RRLTLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS 174
RRLTLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS
Sbjct 121 RRLTLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS 174
>gi|298526544|ref|ZP_07013953.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496338|gb|EFI31632.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=174
Score = 340 bits (872), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 172/174 (99%), Positives = 173/174 (99%), Gaps = 0/174 (0%)
Query 1 LACVRRSCDVTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPY 60
+ACVRRS DVTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPY
Sbjct 1 MACVRRSYDVTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPY 60
Query 61 SRDGVIAVPAQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSG 120
SRDGVIAVPAQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSG
Sbjct 61 SRDGVIAVPAQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSG 120
Query 121 RRLTLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS 174
RRLTLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS
Sbjct 121 RRLTLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS 174
>gi|15842642|ref|NP_337679.1| hypothetical protein MT3157 [Mycobacterium tuberculosis CDC1551]
gi|148824264|ref|YP_001289018.1| hypothetical protein TBFG_13089 [Mycobacterium tuberculosis F11]
gi|254365700|ref|ZP_04981745.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|13882959|gb|AAK47493.1| hypothetical protein MT3157 [Mycobacterium tuberculosis CDC1551]
gi|134151213|gb|EBA43258.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|148722791|gb|ABR07416.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
Length=171
Score = 337 bits (863), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 170/171 (99%), Positives = 171/171 (100%), Gaps = 0/171 (0%)
Query 4 VRRSCDVTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRD 63
+RRSCDVTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRD
Sbjct 1 MRRSCDVTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRD 60
Query 64 GVIAVPAQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRL 123
GVIAVPAQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRL
Sbjct 61 GVIAVPAQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRL 120
Query 124 TLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS 174
TLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS
Sbjct 121 TLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS 171
>gi|167969677|ref|ZP_02551954.1| hypothetical protein MtubH3_17298 [Mycobacterium tuberculosis
H37Ra]
gi|254552150|ref|ZP_05142597.1| hypothetical protein Mtube_17141 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289759197|ref|ZP_06518575.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
8 more sequence titles
Length=165
Score = 325 bits (834), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/165 (99%), Positives = 165/165 (100%), Gaps = 0/165 (0%)
Query 10 VTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVP 69
+TGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVP
Sbjct 1 MTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVP 60
Query 70 AQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVAS 129
AQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVAS
Sbjct 61 AQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVAS 120
Query 130 DGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS 174
DGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS
Sbjct 121 DGPRRSSTRSECHSSGAQSAPPNTSLQCAHYGATTSHRSTATVGS 165
>gi|340628064|ref|YP_004746516.1| hypothetical protein MCAN_30981 [Mycobacterium canettii CIPT
140010059]
gi|340006254|emb|CCC45429.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=157
Score = 273 bits (698), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 153/157 (98%), Positives = 154/157 (99%), Gaps = 0/157 (0%)
Query 1 LACVRRSCDVTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPY 60
+ACVRRSCD TGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPAS YPY
Sbjct 1 MACVRRSCDATGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASCYPY 60
Query 61 SRDGVIAVPAQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSG 120
SRDGVIAVPAQADWLDPMIALSFAAA SSRVDVATGVLLLPEHNPVIVAKEAASLDRLSG
Sbjct 61 SRDGVIAVPAQADWLDPMIALSFAAATSSRVDVATGVLLLPEHNPVIVAKEAASLDRLSG 120
Query 121 RRLTLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQC 157
RRLTLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQC
Sbjct 121 RRLTLGVASDGPRRSSTRSECHSSGAQSAPPNTSLQC 157
>gi|296169253|ref|ZP_06850904.1| possible oxidoreductase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896077|gb|EFG75745.1| possible oxidoreductase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=285
Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/112 (84%), Positives = 101/112 (91%), Gaps = 0/112 (0%)
Query 17 GIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLD 76
GIGAGAD AV+DAVA AD+CGFATLW GEHVVMVDR SRYPYS DGVIAVPAQADWLD
Sbjct 9 GIGAGADRAVIDAVASTADECGFATLWAGEHVVMVDRSGSRYPYSDDGVIAVPAQADWLD 68
Query 77 PMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVA 128
P IALSFAAAASSR+ +ATGVLLLPEHNPV++AK+AASLDRLSG RLTLGV
Sbjct 69 PTIALSFAAAASSRIGLATGVLLLPEHNPVVMAKQAASLDRLSGGRLTLGVG 120
>gi|118471087|ref|YP_887142.1| hydride transferase 1 [Mycobacterium smegmatis str. MC2 155]
gi|118172374|gb|ABK73270.1| hydride transferase 1 [Mycobacterium smegmatis str. MC2 155]
Length=288
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/111 (77%), Positives = 95/111 (86%), Gaps = 0/111 (0%)
Query 17 GIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLD 76
GIGAGA ++DAVAVAA+ GF TLW GEHVVMVDRP SRYPYS DG IAV A ADWLD
Sbjct 9 GIGAGARREIIDAVAVAAERAGFTTLWCGEHVVMVDRPRSRYPYSADGRIAVAADADWLD 68
Query 77 PMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
PMIALSFAAAA+S + +ATGVLLLPEHNPVI+AK+AAS+D+LSG RL LGV
Sbjct 69 PMIALSFAAAATSTIRIATGVLLLPEHNPVIMAKQAASVDQLSGGRLLLGV 119
>gi|240170662|ref|ZP_04749321.1| oxidoreductase [Mycobacterium kansasii ATCC 12478]
Length=297
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/111 (86%), Positives = 102/111 (92%), Gaps = 0/111 (0%)
Query 17 GIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLD 76
GIG+GAD V+DAVA AAD+ GFATLW GEHVVMVDRPASRYPYS DGVIAVPAQADWLD
Sbjct 9 GIGSGADRTVIDAVASAADNAGFATLWAGEHVVMVDRPASRYPYSDDGVIAVPAQADWLD 68
Query 77 PMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
PMIAL+FAAAASSR+ VATGVLLLPEHNPV+VAK+AASLDRLSG RL LGV
Sbjct 69 PMIALAFAAAASSRIAVATGVLLLPEHNPVVVAKQAASLDRLSGGRLVLGV 119
>gi|111023509|ref|YP_706481.1| hydride transferase [Rhodococcus jostii RHA1]
gi|110823039|gb|ABG98323.1| possible hydride transferase [Rhodococcus jostii RHA1]
Length=290
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/111 (75%), Positives = 95/111 (86%), Gaps = 0/111 (0%)
Query 17 GIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLD 76
GIG GA AV+D+VAVAA++ GFATLW GEHVVMVDR SRYPY+ DG IAVPA ADWLD
Sbjct 9 GIGTGARRAVIDSVAVAAENSGFATLWAGEHVVMVDRSESRYPYADDGRIAVPAVADWLD 68
Query 77 PMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
PMI LSFAAAA+ + VATGVLLLPEHNPV++AK+AA+LD +SG RLTLGV
Sbjct 69 PMIGLSFAAAATHTIGVATGVLLLPEHNPVLMAKQAATLDLMSGGRLTLGV 119
>gi|54025259|ref|YP_119501.1| hypothetical protein nfa32900 [Nocardia farcinica IFM 10152]
gi|54016767|dbj|BAD58137.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=293
Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/111 (73%), Positives = 93/111 (84%), Gaps = 0/111 (0%)
Query 17 GIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLD 76
GIG G+ PAVV+AVA A+ GFATLW GEHVV+VD PASRYPYS DG IAVPA ADWLD
Sbjct 13 GIGTGSRPAVVEAVARRAEAHGFATLWSGEHVVLVDEPASRYPYSPDGRIAVPAAADWLD 72
Query 77 PMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
P++ L FAAA ++ + +ATGVLLLPEHNPV+VAK+AASLDRLSG R TLGV
Sbjct 73 PLLTLGFAAACTTTIRLATGVLLLPEHNPVVVAKQAASLDRLSGGRFTLGV 123
>gi|345013663|ref|YP_004816017.1| putative F420-dependent oxidoreductase [Streptomyces violaceusniger
Tu 4113]
gi|344040012|gb|AEM85737.1| putative F420-dependent oxidoreductase [Streptomyces violaceusniger
Tu 4113]
Length=289
Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/111 (71%), Positives = 92/111 (83%), Gaps = 0/111 (0%)
Query 17 GIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLD 76
GIG GA P V+ AVA AA+ GFA LW GEHVV+VD P SRYPYS DG IAVPA ADWLD
Sbjct 9 GIGDGARPEVIRAVATAAETHGFARLWCGEHVVLVDAPDSRYPYSADGRIAVPADADWLD 68
Query 77 PMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
P++AL+FAAA +SR+++ATGVLLLPEHNPV+VAK+AA+LD LS R +LGV
Sbjct 69 PLLALTFAAAVTSRIELATGVLLLPEHNPVLVAKQAATLDVLSAGRFSLGV 119
>gi|183981602|ref|YP_001849893.1| oxidoreductase [Mycobacterium marinum M]
gi|183174928|gb|ACC40038.1| oxidoreductase [Mycobacterium marinum M]
Length=292
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/111 (85%), Positives = 101/111 (91%), Gaps = 0/111 (0%)
Query 17 GIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLD 76
GIGAGAD +++DAVA AADD GFATLW GEHVVMVDR SRYPYS DGVIA+P QADWLD
Sbjct 9 GIGAGADRSMIDAVACAADDAGFATLWAGEHVVMVDRHTSRYPYSEDGVIAIPPQADWLD 68
Query 77 PMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
PMIALSFAAAASSR+ VATGVLLLPEHNPV+VAK+AASLDRLSG RLTLGV
Sbjct 69 PMIALSFAAAASSRITVATGVLLLPEHNPVVVAKQAASLDRLSGGRLTLGV 119
>gi|118618754|ref|YP_907086.1| oxidoreductase [Mycobacterium ulcerans Agy99]
gi|118570864|gb|ABL05615.1| oxidoreductase [Mycobacterium ulcerans Agy99]
Length=292
Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/110 (84%), Positives = 100/110 (91%), Gaps = 0/110 (0%)
Query 18 IGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDP 77
IGAGAD +++DAVA AADD GFATLW GEHVVMVDR SRYPYS DGVIA+P QADWLDP
Sbjct 10 IGAGADRSMIDAVACAADDAGFATLWAGEHVVMVDRHTSRYPYSEDGVIAIPPQADWLDP 69
Query 78 MIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
MIALSFAAA+SSR+ VATGVLLLPEHNPV+VAK+AASLDRLSG RLTLGV
Sbjct 70 MIALSFAAASSSRITVATGVLLLPEHNPVVVAKQAASLDRLSGGRLTLGV 119
>gi|226366011|ref|YP_002783794.1| oxidoreductase [Rhodococcus opacus B4]
gi|226244501|dbj|BAH54849.1| putative oxidoreductase [Rhodococcus opacus B4]
Length=290
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/111 (74%), Positives = 96/111 (87%), Gaps = 0/111 (0%)
Query 17 GIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLD 76
GIG GA AV+DAVAVAA+ GFATLW GEHVVMVDRPASRYPY+ DG IAVPA ADWLD
Sbjct 9 GIGTGARRAVIDAVAVAAESSGFATLWAGEHVVMVDRPASRYPYADDGKIAVPAVADWLD 68
Query 77 PMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
PM+ LSFAAAA+ + +ATG++LLPEHNPV++AK+AA+LD +SG RLTLGV
Sbjct 69 PMVGLSFAAAATRTIGIATGIVLLPEHNPVLMAKQAATLDLMSGGRLTLGV 119
>gi|315445765|ref|YP_004078644.1| flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin
reductase [Mycobacterium sp. Spyr1]
gi|315264068|gb|ADU00810.1| flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin
reductase [Mycobacterium sp. Spyr1]
Length=290
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/111 (64%), Positives = 86/111 (78%), Gaps = 0/111 (0%)
Query 17 GIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLD 76
GIGAGA V+DAVA +A+ GF TLW G+ VVM D +PY DG I AQ DWLD
Sbjct 10 GIGAGAQRTVIDAVAASAERSGFETLWFGDQVVMADEDGPHHPYRDDGEIPASAQTDWLD 69
Query 77 PMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
P+IALSFAAAA++R+++ATGVL+LPE NPV+ AK+AASLDR++G RLTLGV
Sbjct 70 PLIALSFAAAATNRIELATGVLVLPERNPVVTAKQAASLDRMTGGRLTLGV 120
>gi|145225417|ref|YP_001136095.1| luciferase family protein [Mycobacterium gilvum PYR-GCK]
gi|145217903|gb|ABP47307.1| luciferase family protein [Mycobacterium gilvum PYR-GCK]
Length=272
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/102 (62%), Positives = 80/102 (79%), Gaps = 0/102 (0%)
Query 26 VVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPMIALSFAA 85
++DAVA +A+ GF TLW G+ VVM D +PY DG I AQ DWLDP+IALSFAA
Sbjct 1 MIDAVAASAERSGFETLWFGDQVVMADEDGPHHPYRDDGEIPASAQTDWLDPLIALSFAA 60
Query 86 AASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
AA++R+++ATGVL+LPE NPV+ AK+AASLDR++G RLTLGV
Sbjct 61 AATNRIELATGVLVLPERNPVVTAKQAASLDRMTGGRLTLGV 102
>gi|300785118|ref|YP_003765409.1| luciferase-like monooxygenase [Amycolatopsis mediterranei U32]
gi|299794632|gb|ADJ45007.1| luciferase-like monooxygenase [Amycolatopsis mediterranei U32]
gi|340526554|gb|AEK41759.1| luciferase-like monooxygenase [Amycolatopsis mediterranei S699]
Length=285
Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/111 (44%), Positives = 70/111 (64%), Gaps = 7/111 (6%)
Query 21 GADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPMIA 80
GADP + A A++CGF +L++ EHV + YP ++ G +A+P + DP+
Sbjct 14 GADPQAIAGFARDAEECGFESLYLPEHVAL-------YPGAQIGTMALPPSLPYADPLEC 66
Query 81 LSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVASDG 131
LSF AA +SR+ + TGVLLLP H+PV++AK A++D LSG R+ L A G
Sbjct 67 LSFVAAVTSRILLGTGVLLLPYHHPVVLAKRLATVDVLSGGRMRLLTAGVG 117
>gi|226308574|ref|YP_002768534.1| oxidoreductase [Rhodococcus erythropolis PR4]
gi|226187691|dbj|BAH35795.1| putative oxidoreductase [Rhodococcus erythropolis PR4]
Length=293
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/108 (46%), Positives = 67/108 (63%), Gaps = 0/108 (0%)
Query 18 IGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDP 77
+G DPA + A AA+ GF + EH V++ AS YPYS G +P D DP
Sbjct 11 LGRSGDPAWILQFARAAESLGFDEISAVEHSVVIADTASEYPYSPTGKSHLPDDCDIPDP 70
Query 78 MIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTL 125
+ LSF A A++ + ++TGVL+LP HNPV++AK A+LDRLSG RL +
Sbjct 71 LELLSFVAGATTTLGLSTGVLVLPNHNPVVLAKRLATLDRLSGGRLRI 118
>gi|240172014|ref|ZP_04750673.1| hypothetical protein MkanA1_22050 [Mycobacterium kansasii ATCC
12478]
Length=289
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/109 (44%), Positives = 66/109 (61%), Gaps = 0/109 (0%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G ADP + A A+ + C F ++ V EH V+ S YPY R G + + A DP+
Sbjct 10 GVTADPDWMTAFALHLEACNFESIIVAEHTVLFTTYDSVYPYDRSGRVGLAADCPIPDPL 69
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
L F A ++R+ +ATGVL+LP H+PV++AK AA++D LSG RL L V
Sbjct 70 DLLGFLAGRTTRLGLATGVLVLPNHHPVVLAKRAATIDALSGGRLRLCV 118
>gi|342861317|ref|ZP_08717965.1| hypothetical protein MCOL_20636 [Mycobacterium colombiense CECT
3035]
gi|342131217|gb|EGT84498.1| hypothetical protein MCOL_20636 [Mycobacterium colombiense CECT
3035]
Length=293
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/109 (45%), Positives = 68/109 (63%), Gaps = 0/109 (0%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G ADPA + A A + CGF ++ V EH V++ R S YPY G + + DP+
Sbjct 12 GVTADPAWMVAFARHLEACGFESIVVVEHTVLLTRYDSVYPYDDSGRVGLAPDCPIPDPL 71
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
L+F A +SR+ +ATGVL+LP H+PV++AK AA++D LSG RL L V
Sbjct 72 DLLAFLAGQTSRLGLATGVLVLPNHHPVVLAKRAATVDALSGGRLRLCV 120
>gi|169627470|ref|YP_001701119.1| hypothetical protein MAB_0366 [Mycobacterium abscessus ATCC 19977]
gi|169239437|emb|CAM60465.1| Conserved hypothetical protein (hydride transferase/luciferase?)
[Mycobacterium abscessus]
Length=295
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/108 (44%), Positives = 69/108 (64%), Gaps = 0/108 (0%)
Query 18 IGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDP 77
+G A+P + A AA+ GF+ + V EH V++ S YPYS G +P D DP
Sbjct 11 LGVTAEPDKILEFARAAERLGFSEISVVEHAVVIGDTQSTYPYSPTGQSHLPDDIDIPDP 70
Query 78 MIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTL 125
+ LSF AAA++ + ++TGVL+LP+H+PV++AK A+LDRLS RL +
Sbjct 71 LELLSFVAAATTTLGLSTGVLVLPDHHPVVLAKRLATLDRLSRGRLRI 118
>gi|111222953|ref|YP_713747.1| putative alkanesulfonate monooxygenase [Frankia alni ACN14a]
gi|111150485|emb|CAJ62184.1| putative Alkanesulfonate monooxygenase [Frankia alni ACN14a]
Length=293
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/107 (46%), Positives = 68/107 (64%), Gaps = 2/107 (1%)
Query 23 DPAVVDAVAVAADDCGFATLWVGEHVVMVDRP-ASRYPYSRDGVI-AVPAQADWLDPMIA 80
DP A+AVAA+ GF +LW EHVV RP A+ Y +G + + + DP+I
Sbjct 14 DPEDAVALAVAAEQAGFESLWAPEHVVQSRRPDATPYRGVTNGSMDRLSRRGGMPDPLIW 73
Query 81 LSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
L++ AA ++R+ TGVL+LPEH P ++AK AA+LD LSG RL LG+
Sbjct 74 LTYVAAVTTRIRFGTGVLILPEHQPTVLAKTAATLDHLSGGRLMLGI 120
>gi|229488341|ref|ZP_04382207.1| luciferase family protein [Rhodococcus erythropolis SK121]
gi|229323845|gb|EEN89600.1| luciferase family protein [Rhodococcus erythropolis SK121]
Length=293
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/108 (44%), Positives = 65/108 (61%), Gaps = 0/108 (0%)
Query 18 IGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDP 77
+G DP + A AA+ GF + EH V++ S YPYS G +P D DP
Sbjct 11 LGRSGDPDWILQFARAAESLGFDEISAVEHSVVIADTESEYPYSPTGKSHLPDDCDIPDP 70
Query 78 MIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTL 125
+ LSF A A++ + ++TGVL+LP HNPV++AK A+LDRLSG RL +
Sbjct 71 LELLSFVAGATTTLGLSTGVLVLPNHNPVVLAKRLATLDRLSGGRLRI 118
>gi|271965582|ref|YP_003339778.1| coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin
reductase-like protein [Streptosporangium roseum DSM 43021]
gi|270508757|gb|ACZ87035.1| Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin
reductase-like protein [Streptosporangium roseum DSM 43021]
Length=289
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/111 (43%), Positives = 66/111 (60%), Gaps = 7/111 (6%)
Query 21 GADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPMIA 80
G DP + A A A+DCGF +L+V EH+ + YP + G +P + DP+
Sbjct 13 GIDPDKIVAYAQHAEDCGFESLYVPEHIAL-------YPGATVGRFELPPALPYFDPLDC 65
Query 81 LSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVASDG 131
LSF AAA+ R+ + TGVLLLP H+PV++AK A++D LS R+ L A G
Sbjct 66 LSFVAAATRRILLGTGVLLLPYHHPVVLAKRLATVDVLSKGRMRLLTAGLG 116
>gi|254480180|ref|ZP_05093428.1| Luciferase-like monooxygenase superfamily protein [marine gamma
proteobacterium HTCC2148]
gi|214039742|gb|EEB80401.1| Luciferase-like monooxygenase superfamily protein [marine gamma
proteobacterium HTCC2148]
Length=286
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (44%), Positives = 63/98 (65%), Gaps = 0/98 (0%)
Query 29 AVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPMIALSFAAAAS 88
+A A+ F +LW EHV++ S+YPYS+DG + + +LDP+IAL+ AA +
Sbjct 20 GLAQYAESLNFESLWTFEHVMVPVEYESKYPYSKDGKMGGGSDNPFLDPLIALTAVAAHT 79
Query 89 SRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLG 126
V + TGV +L + NP+++AK+AASLD LSG R LG
Sbjct 80 KTVRLGTGVNILSQANPLLLAKQAASLDVLSGGRFMLG 117
>gi|86738882|ref|YP_479282.1| luciferase-like protein [Frankia sp. CcI3]
gi|86565744|gb|ABD09553.1| luciferase-like [Frankia sp. CcI3]
Length=289
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/105 (42%), Positives = 65/105 (62%), Gaps = 7/105 (6%)
Query 21 GADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPMIA 80
G DP + A A A++CGF L++ EH+V+ YP + G I +P + DP+
Sbjct 13 GVDPDRITAYAQHAEECGFEALYLPEHIVL-------YPGAMVGSIEIPPSLPYADPLDC 65
Query 81 LSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTL 125
LS AAA++R+ + TGVLLLP H+PV++AK A++D LS R+ L
Sbjct 66 LSLVAAATNRMLLGTGVLLLPYHHPVVLAKRLATIDVLSKGRMRL 110
>gi|288921640|ref|ZP_06415910.1| Luciferase-like monooxygenase [Frankia sp. EUN1f]
gi|288346960|gb|EFC81267.1| Luciferase-like monooxygenase [Frankia sp. EUN1f]
Length=281
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/110 (41%), Positives = 71/110 (65%), Gaps = 8/110 (7%)
Query 20 AGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPMI 79
A A P +A A++ G+ + W GEHVV+ P+ R P S + A+ LDP+I
Sbjct 12 ATAGPEATVRLARLAEELGYRSWWAGEHVVL---PSPRVPAS-----PMDAKDPILDPLI 63
Query 80 ALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVAS 129
L++ AAA+ R+++ TG+++LP+ NP+++AK+ ASLD LSG R+ LGV +
Sbjct 64 HLTYVAAATRRLELGTGIVILPQRNPLVLAKQVASLDMLSGGRVLLGVGA 113
>gi|336457645|gb|EGO36649.1| putative oxidoreductase, Rv2161c family [Mycobacterium avium
subsp. paratuberculosis S397]
Length=297
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/109 (43%), Positives = 65/109 (60%), Gaps = 0/109 (0%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G ADP + A A + CGF ++ EH V++ R S YPY G + + DP+
Sbjct 12 GVTADPDWMVAFARHLEACGFESIVAVEHTVLLTRYDSVYPYDSSGRVGLAPDCPIPDPL 71
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
L+F A ++R+ +ATGVL+LP H+PV++AK A+LD LSG RL L V
Sbjct 72 DLLAFLAGHTTRLGLATGVLVLPNHHPVVLAKRVATLDALSGGRLRLCV 120
>gi|41407597|ref|NP_960433.1| hypothetical protein MAP1499c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395950|gb|AAS03816.1| hypothetical protein MAP_1499c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=292
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/109 (43%), Positives = 65/109 (60%), Gaps = 0/109 (0%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G ADP + A A + CGF ++ EH V++ R S YPY G + + DP+
Sbjct 7 GVTADPDWMVAFARHLEACGFESIVAVEHTVLLTRYDSVYPYDSSGRVGLAPDCPIPDPL 66
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
L+F A ++R+ +ATGVL+LP H+PV++AK A+LD LSG RL L V
Sbjct 67 DLLAFLAGHTTRLGLATGVLVLPNHHPVVLAKRVATLDALSGGRLRLCV 115
>gi|119715094|ref|YP_922059.1| luciferase family protein [Nocardioides sp. JS614]
gi|119535755|gb|ABL80372.1| luciferase family protein [Nocardioides sp. JS614]
Length=293
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/111 (37%), Positives = 65/111 (59%), Gaps = 0/111 (0%)
Query 12 GTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQ 71
G G G A P + A A A+ GF ++W+ +H+ + AS+YPY++DG P +
Sbjct 4 GLRLPGAGPYAGPEAITAFAQKAEQLGFDSIWMTDHIALPVDVASKYPYTQDGKFFWPPE 63
Query 72 ADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRR 122
+ D ++ L++A+AA+ R+ V T VL+ H+PV AK A+LD L+G R
Sbjct 64 TPYFDTILTLTWASAATERIKVGTSVLIAGWHHPVNTAKALATLDVLNGGR 114
>gi|119868953|ref|YP_938905.1| luciferase family protein [Mycobacterium sp. KMS]
gi|119695042|gb|ABL92115.1| luciferase family protein [Mycobacterium sp. KMS]
Length=351
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/111 (41%), Positives = 67/111 (61%), Gaps = 0/111 (0%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G ADPA + A A + CGF ++ EH V++ + S YPY G + + A DP+
Sbjct 72 GVTADPAWMAAFARHLEACGFESIVAVEHTVLMTQYTSVYPYDPSGRVELAADTPVPDPL 131
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVAS 129
L+F AA + R+ +ATGVL+LP H+PV++AK A++D LS R+ L V +
Sbjct 132 DLLTFLAAHTERLGLATGVLVLPNHHPVVLAKRVATVDALSRGRVRLAVGT 182
>gi|108799843|ref|YP_640040.1| luciferase-like protein [Mycobacterium sp. MCS]
gi|108770262|gb|ABG08984.1| luciferase-like protein [Mycobacterium sp. MCS]
Length=291
Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/111 (41%), Positives = 67/111 (61%), Gaps = 0/111 (0%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G ADPA + A A + CGF ++ EH V++ + S YPY G + + A DP+
Sbjct 12 GVTADPAWMAAFARHLEACGFESIVAVEHTVLMTQYTSVYPYDPSGRVELAADTPVPDPL 71
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVAS 129
L+F AA + R+ +ATGVL+LP H+PV++AK A++D LS R+ L V +
Sbjct 72 DLLTFLAAHTERLGLATGVLVLPNHHPVVLAKRVATVDALSRGRVRLAVGT 122
>gi|254820284|ref|ZP_05225285.1| hypothetical protein MintA_10166 [Mycobacterium intracellulare
ATCC 13950]
Length=293
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/109 (42%), Positives = 65/109 (60%), Gaps = 0/109 (0%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G ADP + A A + CGF ++ EH V++ R S YPY R G + + DP+
Sbjct 12 GVTADPEWMVAFARHLEACGFESIVAVEHTVLLTRYDSVYPYDRSGRVGLAPDCPIPDPL 71
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
L+F A ++ + +ATGVL+LP H+PV++AK A++D LSG RL L V
Sbjct 72 DLLAFLAGHTTSLGLATGVLVLPNHHPVVLAKRVATVDALSGGRLRLCV 120
>gi|126435486|ref|YP_001071177.1| luciferase family protein [Mycobacterium sp. JLS]
gi|126235286|gb|ABN98686.1| luciferase family protein [Mycobacterium sp. JLS]
Length=291
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/111 (41%), Positives = 67/111 (61%), Gaps = 0/111 (0%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G ADPA + A A + CGF ++ EH V++ + S YPY G + + A DP+
Sbjct 12 GVTADPAWMAAFARHLEACGFESIVAVEHTVLMTQYTSVYPYDPSGRVELAADTPVPDPL 71
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVAS 129
L+F AA + R+ +ATGVL+LP H+PV++AK A++D LS R+ L V +
Sbjct 72 DLLTFLAAHTERLGLATGVLVLPNHHPVVLAKRVATVDALSRGRVRLAVGT 122
>gi|118466263|ref|YP_882121.1| hypothetical protein MAV_2935 [Mycobacterium avium 104]
gi|118167550|gb|ABK68447.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=292
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/109 (42%), Positives = 64/109 (59%), Gaps = 0/109 (0%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G ADP + A A + CGF ++ EH V++ R S YPY G + + DP+
Sbjct 7 GVTADPDWMVAFARHLEACGFESIVAVEHTVLLTRYDSVYPYDSSGRVGLAPDCPIPDPL 66
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
L+F A ++R+ +ATGVL+LP H+PV++AK +LD LSG RL L V
Sbjct 67 DLLAFLAGHTTRLGLATGVLVLPNHHPVVLAKRVGTLDALSGGRLRLCV 115
>gi|111022786|ref|YP_705758.1| hypothetical protein RHA1_ro05823 [Rhodococcus jostii RHA1]
gi|110822316|gb|ABG97600.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=295
Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/108 (42%), Positives = 64/108 (60%), Gaps = 0/108 (0%)
Query 18 IGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDP 77
+G +P + A AA+ GF + EH V++ AS YPYS G +P DP
Sbjct 11 LGGAGEPEWILEFARAAESLGFDEISAVEHSVVIADTASAYPYSPTGKSHLPDDCSLPDP 70
Query 78 MIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTL 125
+ LSF A A++ + +ATGVL+LP H+PV++AK A+LDRLS RL +
Sbjct 71 LELLSFVAGATTTLGLATGVLVLPNHHPVVLAKRLATLDRLSAGRLRI 118
>gi|254775409|ref|ZP_05216925.1| hypothetical protein MaviaA2_12171 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=297
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/109 (42%), Positives = 64/109 (59%), Gaps = 0/109 (0%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G ADP + A A + CGF ++ EH V++ R S YPY G + + DP+
Sbjct 12 GVTADPDWMVAFARHLEACGFESIVAVEHTVLLTRYDSVYPYDSSGRVGLAPDCPIPDPL 71
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
L+F A ++R+ +ATGVL+LP H+PV++AK +LD LSG RL L V
Sbjct 72 DLLAFLAGHTTRLGLATGVLVLPNHHPVVLAKRVGTLDALSGGRLRLCV 120
>gi|158314154|ref|YP_001506662.1| luciferase family protein [Frankia sp. EAN1pec]
gi|158109559|gb|ABW11756.1| luciferase family protein [Frankia sp. EAN1pec]
Length=281
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 70/110 (64%), Gaps = 8/110 (7%)
Query 20 AGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPMI 79
A A P +A A++ G+ + W GEHVV+ P+ R P S + A LDP++
Sbjct 12 ATAGPEATVRLARLAEELGYRSWWAGEHVVL---PSPRVPAS-----PMEATDPILDPLV 63
Query 80 ALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVAS 129
L++ AAA+ R+++ TG+++LP+ NP+++AK+ ASLD LSG R+ LGV +
Sbjct 64 HLTYVAAATRRLELGTGIVILPQRNPLVLAKQVASLDVLSGGRVLLGVGA 113
>gi|297182086|gb|ADI18259.1| coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin
reductase and related flavin-dependent oxidoreductases [uncultured
Chromatiales bacterium HF0200_41F04]
Length=288
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/109 (38%), Positives = 62/109 (57%), Gaps = 0/109 (0%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G + P V ++ +D GF ++WV +H+++ S YPY DG V L+P
Sbjct 11 GETSRPDYVARMSRGIEDRGFHSVWVPDHILVPKVIKSSYPYEEDGSFPVEPTTQGLEPF 70
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
LSF AA ++R+ + TGV++LP+ N + AK+ A +D LSG RL GV
Sbjct 71 TVLSFMAAHTTRLRLGTGVIVLPQRNAALTAKQVADVDVLSGGRLDFGV 119
>gi|226365294|ref|YP_002783077.1| oxidoreductase [Rhodococcus opacus B4]
gi|226243784|dbj|BAH54132.1| putative oxidoreductase [Rhodococcus opacus B4]
Length=295
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/108 (41%), Positives = 63/108 (59%), Gaps = 0/108 (0%)
Query 18 IGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDP 77
+G +P + A AA+ GF + EH V++ S YPYS G +P DP
Sbjct 11 LGRAGEPEWILEFARAAESLGFDEISAVEHSVVIADTTSDYPYSPTGKSHLPDDCSLPDP 70
Query 78 MIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTL 125
+ LSF A A++ + +ATGVL+LP H+PV++AK A+LDRLS RL +
Sbjct 71 LELLSFVAGATTTLGLATGVLVLPNHHPVVLAKRLATLDRLSAGRLRI 118
>gi|312197054|ref|YP_004017115.1| F420-dependent oxidoreductase [Frankia sp. EuI1c]
gi|311228390|gb|ADP81245.1| putative F420-dependent oxidoreductase [Frankia sp. EuI1c]
Length=293
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/99 (40%), Positives = 58/99 (59%), Gaps = 0/99 (0%)
Query 29 AVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPMIALSFAAAAS 88
A+A +D GF ++WV +H+ + + YPY DG + DP + LS+ AAA+
Sbjct 18 AIAEIYEDAGFESIWVPDHLALPVEMPTDYPYRSDGTLPFGTDVALYDPWLWLSYLAAAT 77
Query 89 SRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
RV +ATGV +LP +P+ A+ +LDRLSG R LG+
Sbjct 78 ERVKLATGVFILPLRHPLPTARSLVTLDRLSGGRAVLGI 116
>gi|269127718|ref|YP_003301088.1| luciferase-like monooxygenase [Thermomonospora curvata DSM 43183]
gi|268312676|gb|ACY99050.1| Luciferase-like monooxygenase [Thermomonospora curvata DSM 43183]
Length=295
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/131 (41%), Positives = 72/131 (55%), Gaps = 5/131 (3%)
Query 19 GAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPM 78
G ADP + A A+ CGF ++ V EH V+ S YPY G + + D DP+
Sbjct 12 GVTADPQWIGRYARHAEACGFESISVVEHTVVAAGYTSTYPYDASGRMDLADDLDIPDPL 71
Query 79 IALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVASDGPRRSSTR 138
L+F A + R+ +ATGVL+LP H+PV++AK AA++DRLSG RL L V R
Sbjct 72 DLLAFLAGCTGRIGLATGVLVLPNHHPVVLAKRAATVDRLSGGRLRLTVGM-----GWMR 126
Query 139 SECHSSGAQSA 149
E + GA A
Sbjct 127 EEVEACGADFA 137
>gi|262198764|ref|YP_003269973.1| luciferase-like protein [Haliangium ochraceum DSM 14365]
gi|262082111|gb|ACY18080.1| Luciferase-like, subgroup [Haliangium ochraceum DSM 14365]
Length=294
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/98 (40%), Positives = 61/98 (63%), Gaps = 2/98 (2%)
Query 34 ADDCGFATLWVGEHVVMV--DRPASRYPYSRDGVIAVPAQADWLDPMIALSFAAAASSRV 91
A+ GF ++WV +HV++ + S YPY +G PA WLDP++AL+ A + V
Sbjct 26 AEALGFHSVWVSDHVILPAPEEVRSHYPYDAEGRWPYPADTPWLDPLLALATVAQVAPSV 85
Query 92 DVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVAS 129
+ T VL+ P +PV++AK+ A+LD LSG R+ LG+ +
Sbjct 86 SLGTSVLVAPLRHPVLLAKQIATLDYLSGGRVLLGIGA 123
>gi|312199356|ref|YP_004019417.1| F420-dependent oxidoreductase [Frankia sp. EuI1c]
gi|311230692|gb|ADP83547.1| putative F420-dependent oxidoreductase [Frankia sp. EuI1c]
Length=307
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
Query 30 VAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPMIALSFAAAASS 89
+A AADD G TL +HV+M +R RYP+ R P + WL+P+ LS A A++
Sbjct 30 LARAADDAGIDTLVQSDHVIMGER-HDRYPWGR---FPFPNGSPWLEPLTLLSVIAGATA 85
Query 90 RVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVAS 129
RV ++TG+L+ P ++AK+AA+LD LSG RL LGV +
Sbjct 86 RVRLSTGILIAGLRRPTLLAKQAATLDALSGGRLELGVGT 125
>gi|296164772|ref|ZP_06847334.1| luciferase family protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295899873|gb|EFG79317.1| luciferase family protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=293
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/118 (44%), Positives = 72/118 (62%), Gaps = 0/118 (0%)
Query 10 VTGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVP 69
V+ A G G ADP + A A+ + CGF ++ V EH V+V R S YPY G + +
Sbjct 3 VSVVAPVGDGVTADPEWMAAFALHLERCGFESVVVVEHTVLVTRYESVYPYDSSGRVGLA 62
Query 70 AQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
A DP+ L+F A ++ + +ATGVL+LP H+PV++AK AA++D LSG RL L V
Sbjct 63 ADCPIPDPLDLLAFLAGRTTTLGLATGVLVLPNHHPVVLAKRAATVDALSGGRLRLCV 120
>gi|221633550|ref|YP_002522776.1| putative monooxygenase [Thermomicrobium roseum DSM 5159]
gi|221155433|gb|ACM04560.1| putative monooxygenase [Thermomicrobium roseum DSM 5159]
Length=292
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/110 (40%), Positives = 63/110 (58%), Gaps = 11/110 (10%)
Query 21 GADPAVVDAVAVAADDCGFATLWVGEHVVMVD---RPASRYPYSRDGVIAVPAQADWLDP 77
G+DPAV+ A A ++ G+ L EHVV VD P R PY A+ + +P
Sbjct 13 GSDPAVIRAYAETVEELGYTHLLTYEHVVGVDLAHYPGWRGPYH--------ARHQFHEP 64
Query 78 MIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
+ + AA + +++ TGV++LP+ V+VAK+AA +D LSG RL LGV
Sbjct 65 FVLFGYLAAVTRHLELVTGVVILPQRQTVLVAKQAAEVDVLSGGRLRLGV 114
>gi|311896166|dbj|BAJ28574.1| hypothetical protein KSE_27630 [Kitasatospora setae KM-6054]
Length=284
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/118 (38%), Positives = 63/118 (54%), Gaps = 12/118 (10%)
Query 18 IGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDP 77
G G DP V+ A A ++ GF L V +HV + A+RYP + +P
Sbjct 10 FGPGTDPGVLRAWARTVEELGFDLLMVSDHVAVTPDVAARYPEP------------FHEP 57
Query 78 MIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVASDGPRRS 135
LS+ A + RV + T VL+LP +P++ A+ AA+LDRLSG RL LGV + R+
Sbjct 58 FTLLSWLAGLTDRVRLGTTVLVLPYRDPLLTARMAANLDRLSGGRLVLGVGTGWARQE 115
>gi|269925517|ref|YP_003322140.1| Luciferase-like monooxygenase [Thermobaculum terrenum ATCC BAA-798]
gi|269789177|gb|ACZ41318.1| Luciferase-like monooxygenase [Thermobaculum terrenum ATCC BAA-798]
Length=288
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/121 (36%), Positives = 63/121 (53%), Gaps = 11/121 (9%)
Query 11 TGTARAGIGAGADPAVVDAVAVAADDCGFATLWVGEHVVMVD---RPASRYPYSRDGVIA 67
G I G DP V+ A AA+D G+ L V +HV+ D RP R YS D
Sbjct 3 VGVTFPQIEIGNDPHVIKDYAQAAEDLGYNHLLVFDHVLGADPTNRPGWRGSYSIDDPFH 62
Query 68 VPAQADWLDPMIALSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGV 127
+P + + AA + ++++ TGV++LP+ +VAK+AA +D L+G RL LGV
Sbjct 63 --------EPFVLFGYLAAVTQKLELVTGVIILPQRQTALVAKQAAEVDVLTGGRLRLGV 114
Query 128 A 128
Sbjct 115 G 115
>gi|226364191|ref|YP_002781973.1| hypothetical protein ROP_47810 [Rhodococcus opacus B4]
gi|226242680|dbj|BAH53028.1| hypothetical protein [Rhodococcus opacus B4]
Length=287
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 0/100 (0%)
Query 29 AVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPMIALSFAAAAS 88
A+A A++CGF+++ + + + ++R ++ YPY+ DG + W+DP+IA + A +
Sbjct 17 ALAKTAEECGFSSIALPDSLFFMERQSADYPYTPDGSRMWTEETPWVDPLIAAAAMGAVT 76
Query 89 SRVDVATGVLLLPEHNPVIVAKEAASLDRLSGRRLTLGVA 128
S+++ T VL L NPV++A++ S+ L G R GV
Sbjct 77 SKIEFYTQVLKLGSRNPVLLARQVGSVANLIGNRFGFGVG 116
>gi|256391176|ref|YP_003112740.1| Luciferase-like monooxygenase [Catenulispora acidiphila DSM 44928]
gi|256357402|gb|ACU70899.1| Luciferase-like monooxygenase [Catenulispora acidiphila DSM 44928]
Length=291
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/108 (40%), Positives = 62/108 (58%), Gaps = 8/108 (7%)
Query 21 GADPAVVDAVAVAADDCGFATLWVGEHVVMVDRPASRYPYSRDGVIAVPAQADWLDPMIA 80
GADP + VA A+ GF L+V EHV + YP ++ G +P + DP+
Sbjct 18 GADPDRLVTVAQQAEKSGFEALYVPEHVAV-------YPGAQIGGWQLPTDIPFPDPLDI 70
Query 81 LSFAAAASSRVDVATGVLLLPEHNPVIVAKEAASLDRLS-GRRLTLGV 127
L+F AA + + + TG+LLLP H+PV +AK A++D LS GR LG+
Sbjct 71 LTFVAANTEHLVLGTGILLLPYHHPVTLAKRLATIDVLSRGRMRLLGI 118
Lambda K H
0.317 0.128 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 142560794112
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40