BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3074 Length=424 Score E Sequences producing significant alignments: (Bits) Value gi|339295909|gb|AEJ48020.1| hypothetical protein CCDC5079_2830 [... 840 0.0 gi|15610211|ref|NP_217590.1| hypothetical protein Rv3074 [Mycoba... 839 0.0 gi|254365702|ref|ZP_04981747.1| conserved hypothetical protein [... 838 0.0 gi|167969679|ref|ZP_02551956.1| hypothetical protein MtubH3_1730... 838 0.0 gi|340628065|ref|YP_004746517.1| hypothetical protein MCAN_31001... 836 0.0 gi|289755191|ref|ZP_06514569.1| LOW QUALITY PROTEIN: conserved h... 694 0.0 gi|183981600|ref|YP_001849891.1| hypothetical protein MMAR_1584 ... 665 0.0 gi|342860971|ref|ZP_08717620.1| hypothetical protein MCOL_18907 ... 615 5e-174 gi|41409249|ref|NP_962085.1| hypothetical protein MAP3151 [Mycob... 606 2e-171 gi|118464996|ref|YP_883136.1| hypothetical protein MAV_3980 [Myc... 595 4e-168 gi|296169248|ref|ZP_06850901.1| HNH nuclease [Mycobacterium para... 568 8e-160 gi|254776396|ref|ZP_05217912.1| hypothetical protein MaviaA2_172... 566 3e-159 gi|298526546|ref|ZP_07013955.1| conserved hypothetical protein [... 559 4e-157 gi|254550391|ref|ZP_05140838.1| hypothetical protein Mtube_08010... 556 2e-156 gi|323720131|gb|EGB29235.1| hypothetical protein TMMG_02079 [Myc... 555 6e-156 gi|308375447|ref|ZP_07443945.2| hypothetical protein TMGG_01948 ... 554 1e-155 gi|15608518|ref|NP_215894.1| hypothetical protein Rv1378c [Mycob... 554 1e-155 gi|31792572|ref|NP_855065.1| hypothetical protein Mb1413c [Mycob... 553 1e-155 gi|289554832|ref|ZP_06444042.1| conserved hypothetical protein [... 553 1e-155 gi|121637308|ref|YP_977531.1| hypothetical protein BCG_1439c [My... 553 2e-155 gi|308371953|ref|ZP_07667276.1| hypothetical protein TMDG_03491 ... 552 3e-155 gi|289574045|ref|ZP_06454272.1| conserved hypothetical protein [... 552 3e-155 gi|340626392|ref|YP_004744844.1| hypothetical protein MCAN_13941... 552 4e-155 gi|339631445|ref|YP_004723087.1| hypothetical protein MAF_14000 ... 551 6e-155 gi|15840836|ref|NP_335873.1| hypothetical protein MT1422 [Mycoba... 551 6e-155 gi|108798576|ref|YP_638773.1| hypothetical protein Mmcs_1606 [My... 543 2e-152 gi|289571279|ref|ZP_06451506.1| LOW QUALITY PROTEIN: conserved h... 534 1e-149 gi|126432903|ref|YP_001068594.1| hypothetical protein Mjls_0290 ... 523 3e-146 gi|254821166|ref|ZP_05226167.1| hypothetical protein MintA_14612... 521 8e-146 gi|289553135|ref|ZP_06442345.1| conserved hypothetical protein [... 515 4e-144 gi|240168682|ref|ZP_04747341.1| hypothetical protein MkanA1_0517... 509 2e-142 gi|108797279|ref|YP_637476.1| hypothetical protein Mmcs_0299 [My... 502 4e-140 gi|108801662|ref|YP_641859.1| hypothetical protein Mmcs_4699 [My... 500 2e-139 gi|126437648|ref|YP_001073339.1| hypothetical protein Mjls_5084 ... 499 3e-139 gi|118469447|ref|YP_890248.1| hypothetical protein MSMEG_6025 [M... 496 2e-138 gi|307083945|ref|ZP_07493058.1| hypothetical protein TMLG_03064 ... 490 1e-136 gi|120405676|ref|YP_955505.1| hypothetical protein Mvan_4725 [My... 477 2e-132 gi|120406245|ref|YP_956074.1| hypothetical protein Mvan_5297 [My... 462 6e-128 gi|315446192|ref|YP_004079071.1| hypothetical protein Mspyr1_469... 457 2e-126 gi|315444664|ref|YP_004077543.1| hypothetical protein Mspyr1_309... 454 1e-125 gi|145224332|ref|YP_001135010.1| HNH nuclease [Mycobacterium gil... 454 2e-125 gi|145223173|ref|YP_001133851.1| hypothetical protein Mflv_2586 ... 453 3e-125 gi|120404582|ref|YP_954411.1| hypothetical protein Mvan_3614 [My... 453 3e-125 gi|169628995|ref|YP_001702644.1| hypothetical protein MAB_1907 [... 440 2e-121 gi|145223484|ref|YP_001134162.1| HNH nuclease [Mycobacterium gil... 440 2e-121 gi|119963190|ref|YP_946206.1| hypothetical protein AAur_0393 [Ar... 399 4e-109 gi|226361477|ref|YP_002779255.1| hypothetical protein ROP_20630 ... 390 2e-106 gi|343924565|ref|ZP_08764113.1| hypothetical protein GOALK_017_0... 384 1e-104 gi|111019339|ref|YP_702311.1| hypothetical protein RHA1_ro02347 ... 384 2e-104 gi|119962228|ref|YP_946315.1| HNH endonuclease domain-containing... 380 3e-103 >gi|339295909|gb|AEJ48020.1| hypothetical protein CCDC5079_2830 [Mycobacterium tuberculosis CCDC5079] Length=432 Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/424 (100%), Positives = 424/424 (100%), Gaps = 0/424 (0%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR Sbjct 9 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 68 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL Sbjct 69 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 128 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP Sbjct 129 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 188 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI Sbjct 189 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 248 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA Sbjct 249 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 308 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE Sbjct 309 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 368 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 420 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA Sbjct 369 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 428 Query 421 RYAA 424 RYAA Sbjct 429 RYAA 432 >gi|15610211|ref|NP_217590.1| hypothetical protein Rv3074 [Mycobacterium tuberculosis H37Rv] gi|15842644|ref|NP_337681.1| hypothetical protein MT3159 [Mycobacterium tuberculosis CDC1551] gi|31794253|ref|NP_856746.1| hypothetical protein Mb3101 [Mycobacterium bovis AF2122/97] 62 more sequence titles Length=424 Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/424 (100%), Positives = 424/424 (100%), Gaps = 0/424 (0%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR Sbjct 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL Sbjct 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP Sbjct 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI Sbjct 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA Sbjct 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE Sbjct 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 420 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA Sbjct 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 420 Query 421 RYAA 424 RYAA Sbjct 421 RYAA 424 >gi|254365702|ref|ZP_04981747.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|134151215|gb|EBA43260.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] Length=432 Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/424 (99%), Positives = 424/424 (100%), Gaps = 0/424 (0%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 +FETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR Sbjct 9 IFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 68 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL Sbjct 69 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 128 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP Sbjct 129 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 188 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI Sbjct 189 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 248 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA Sbjct 249 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 308 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE Sbjct 309 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 368 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 420 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA Sbjct 369 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 428 Query 421 RYAA 424 RYAA Sbjct 429 RYAA 432 >gi|167969679|ref|ZP_02551956.1| hypothetical protein MtubH3_17308 [Mycobacterium tuberculosis H37Ra] Length=424 Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/424 (99%), Positives = 424/424 (100%), Gaps = 0/424 (0%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR Sbjct 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL Sbjct 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP Sbjct 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI Sbjct 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 AVNLVMSD+TLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA Sbjct 241 AVNLVMSDDTLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE Sbjct 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 420 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA Sbjct 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 420 Query 421 RYAA 424 RYAA Sbjct 421 RYAA 424 >gi|340628065|ref|YP_004746517.1| hypothetical protein MCAN_31001 [Mycobacterium canettii CIPT 140010059] gi|340006255|emb|CCC45431.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=424 Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/424 (99%), Positives = 423/424 (99%), Gaps = 0/424 (0%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MF+TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR Sbjct 1 MFDTLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL Sbjct 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP Sbjct 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRD AVPTPI Sbjct 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDTAVPTPI 240 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA Sbjct 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE Sbjct 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 420 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA Sbjct 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 420 Query 421 RYAA 424 RYAA Sbjct 421 RYAA 424 >gi|289755191|ref|ZP_06514569.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289695778|gb|EFD63207.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=407 Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/345 (99%), Positives = 345/345 (100%), Gaps = 0/345 (0%) Query 80 SRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAELCGDPGDL 139 +RHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAELCGDPGDL Sbjct 63 ARHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAELCGDPGDL 122 Query 140 EGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVS 199 EGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVS Sbjct 123 EGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVS 182 Query 200 VYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAANTPA 259 VYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAANTPA Sbjct 183 VYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAANTPA 242 Query 260 QLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFI 319 QLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFI Sbjct 243 QLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFI 302 Query 320 ELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDE 379 ELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDE Sbjct 303 ELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDE 362 Query 380 NHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALARYAA 424 NHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALARYAA Sbjct 363 NHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALARYAA 407 >gi|183981600|ref|YP_001849891.1| hypothetical protein MMAR_1584 [Mycobacterium marinum M] gi|183174926|gb|ACC40036.1| conserved hypothetical protein [Mycobacterium marinum M] Length=424 Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/424 (85%), Positives = 389/424 (92%), Gaps = 0/424 (0%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE+L A+DP A++AAL+ERIAELE +KSAAAAGQARAAAA+D ARRAAE AAGVPAARR Sbjct 1 MFESLAAVDPAADQAALVERIAELETVKSAAAAGQARAAAALDTARRAAESAAGVPAARR 60 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRGLA+EIALARRDSPARGSRHLGFAKALV+EMPHTLAAL+CG LSEWRATLIVRESACL Sbjct 61 GRGLANEIALARRDSPARGSRHLGFAKALVHEMPHTLAALECGLLSEWRATLIVRESACL 120 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 D+ RR LDAELCGDP LEGMGDARV AAA+AIAYRLDP AVVDRAA AE +RTVTIRP Sbjct 121 DIEHRRELDAELCGDPSGLEGMGDARVAAAAKAIAYRLDPHAVVDRAAKAERERTVTIRP 180 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 APDTMTYLTALLPVAQG+SVYAAL RAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI Sbjct 181 APDTMTYLTALLPVAQGISVYAALRRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 AVNLV++DE+LLGA + PA +CGYGPIPAAVARTMVA AV D RSRATLRRLYAHP+AGA Sbjct 241 AVNLVLTDESLLGADSAPADVCGYGPIPAAVARTMVADAVADGRSRATLRRLYAHPRAGA 300 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHA PWA GGPT+A NGLG+CE Sbjct 301 LVAMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHARPWAKGGPTTADNGLGSCE 360 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 420 RCNYAK+A GWRV TS+ E HTHTAEF TPTG+ +RSGAPP + VT SELEVR+GI+LA Sbjct 361 RCNYAKEAYGWRVETSMHETHTHTAEFTTPTGTSYRSGAPPRVQTVTASELEVRVGISLA 420 Query 421 RYAA 424 R+AA Sbjct 421 RHAA 424 >gi|342860971|ref|ZP_08717620.1| hypothetical protein MCOL_18907 [Mycobacterium colombiense CECT 3035] gi|342131415|gb|EGT84685.1| hypothetical protein MCOL_18907 [Mycobacterium colombiense CECT 3035] Length=424 Score = 615 bits (1586), Expect = 5e-174, Method: Compositional matrix adjust. Identities = 330/424 (78%), Positives = 366/424 (87%), Gaps = 0/424 (0%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE L +DP A+E+ALIERIAELE KSAAAAGQARAAA +DA RRA E AAGVPA RR Sbjct 1 MFEELATVDPAADESALIERIAELETAKSAAAAGQARAAAELDALRRATEAAAGVPATRR 60 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRG+A E+ALARRD+P+RG RHLGFA ALV+EMPHTLAAL+CGALSEWRATLIVRESACL Sbjct 61 GRGVAGEVALARRDAPSRGGRHLGFATALVHEMPHTLAALECGALSEWRATLIVRESACL 120 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 DV DRRALDAELC D L G+GDARV AAA+AIAYRLDP AVV+RAA AEN+RTVTIRP Sbjct 121 DVEDRRALDAELCADLASLSGLGDARVAAAAKAIAYRLDPHAVVERAAKAENERTVTIRP 180 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 APDTMTYLTALLPVAQGVSVYAAL R ADTR DGR RGQVMADTLVER+TGR A+VP P Sbjct 181 APDTMTYLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERITGRSASVPVPT 240 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 AVNLV+SDETLLG + PA + GYGP+PA VAR MVA AVTD+RSRATLRRLYAHP+AGA Sbjct 241 AVNLVLSDETLLGGDDAPATISGYGPVPAPVARAMVAGAVTDRRSRATLRRLYAHPRAGA 300 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MESRAR+FPRGLA FI LRDQ CRTPYCDAP+RHRDHA PWA GG T+A NGLG CE Sbjct 301 LVAMESRARIFPRGLAEFIGLRDQSCRTPYCDAPVRHRDHAKPWARGGRTTADNGLGLCE 360 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 420 CNY K+ GWRVST+VDENHTHTA F TPTG +RS APP + +TVSE+E+RIG++LA Sbjct 361 ACNYVKENAGWRVSTAVDENHTHTALFTTPTGKSYRSTAPPPVLRITVSEVELRIGVSLA 420 Query 421 RYAA 424 R+AA Sbjct 421 RHAA 424 >gi|41409249|ref|NP_962085.1| hypothetical protein MAP3151 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398069|gb|AAS05699.1| hypothetical protein MAP_3151 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459196|gb|EGO38141.1| hypothetical protein MAPs_04970 [Mycobacterium avium subsp. paratuberculosis S397] Length=428 Score = 606 bits (1563), Expect = 2e-171, Method: Compositional matrix adjust. Identities = 341/424 (81%), Positives = 370/424 (88%), Gaps = 0/424 (0%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 +FE+L A+DP A E+ALIERI+ELE LK AAAA QARAAAA+DAARRAAE AAGVPAARR Sbjct 5 VFESLMAVDPAAGESALIERISELEMLKCAAAAAQARAAAALDAARRAAEAAAGVPAARR 64 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRG+ASE+ALARRDSPARG RHLGFAKALV+EMPHTLAAL+CGALSEWRATLIVRESACL Sbjct 65 GRGVASEVALARRDSPARGGRHLGFAKALVHEMPHTLAALECGALSEWRATLIVRESACL 124 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 D DRRALDAELC DP L GMGDARV AAA+AIAYRLDP AVV+RAA AENDRTVTIRP Sbjct 125 DAEDRRALDAELCADPAGLSGMGDARVAAAAKAIAYRLDPHAVVERAAKAENDRTVTIRP 184 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 APDTMTYLTALLPVAQGVSVYAAL R ADTR DGR RGQVMADTLVERVTGR A VPTP+ Sbjct 185 APDTMTYLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERVTGRRATVPTPV 244 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 AVNLV+SDETLLG A+ P ++ GYGPIPAAVAR MVA+A D RSRATLRRLYAHP+AGA Sbjct 245 AVNLVLSDETLLGGADAPGEISGYGPIPAAVARRMVANAAADPRSRATLRRLYAHPRAGA 304 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MESRARLFP+GLA FI LRDQRCRTPYCDAPIRHRDHA PWADGG TSA NGLG CE Sbjct 305 LVAMESRARLFPQGLARFIGLRDQRCRTPYCDAPIRHRDHAQPWADGGATSAGNGLGLCE 364 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA 420 CNY K+ PGW VS VDE HTHTA F TPTG +RS APP PA+T+S +EVR+ +A A Sbjct 365 HCNYVKETPGWTVSAGVDETHTHTALFTTPTGQTYRSTAPPRAPAITMSTVEVRVTVAFA 424 Query 421 RYAA 424 R+AA Sbjct 425 RHAA 428 >gi|118464996|ref|YP_883136.1| hypothetical protein MAV_3980 [Mycobacterium avium 104] gi|118166283|gb|ABK67180.1| conserved hypothetical protein [Mycobacterium avium 104] Length=419 Score = 595 bits (1535), Expect = 4e-168, Method: Compositional matrix adjust. Identities = 336/418 (81%), Positives = 364/418 (88%), Gaps = 0/418 (0%) Query 7 AIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRGLAS 66 A+DP A E+ALIERI+ELE LK AAAA QARAAAA+DAARRAAE AAGVPAARRGRG+AS Sbjct 2 AVDPAAGESALIERISELETLKCAAAAAQARAAAALDAARRAAEAAAGVPAARRGRGVAS 61 Query 67 EIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRR 126 E+ALARRDSPARG RHLGFAKALV+EMPHTLAAL+CGALSEWRATLIVRESACLD DRR Sbjct 62 EVALARRDSPARGGRHLGFAKALVHEMPHTLAALECGALSEWRATLIVRESACLDAEDRR 121 Query 127 ALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMT 186 ALDAELC DP L GMGDARV AAA+AIAYRLDP AVV+RAA AENDRTVTIRPAPDTMT Sbjct 122 ALDAELCADPAGLSGMGDARVAAAAKAIAYRLDPHAVVERAAKAENDRTVTIRPAPDTMT 181 Query 187 YLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVM 246 YLTALLPVAQGVSVYAAL R ADTR DGR RGQVMADTLVERVTGR + VPTP+AVNLV+ Sbjct 182 YLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERVTGRRSTVPTPVAVNLVL 241 Query 247 SDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMES 306 SDETLLG A+ P ++ GYGPIPAAVAR MVA+A D RSRATLRRLYAHP+AGALV+MES Sbjct 242 SDETLLGGADAPGEISGYGPIPAAVARRMVANAAADPRSRATLRRLYAHPRAGALVAMES 301 Query 307 RARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAK 366 RARLFP+GLA FI LRDQRCRTPYCDAPIRHRDHA PWADGG TSA NGLG CE CNY K Sbjct 302 RARLFPQGLARFIGLRDQRCRTPYCDAPIRHRDHAQPWADGGATSAGNGLGLCEHCNYVK 361 Query 367 QAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALARYAA 424 + GW VS VDE HTHTA F TPTG +RS APP PA+T+S +EVR+ +A AR+AA Sbjct 362 ETSGWTVSAGVDETHTHTALFTTPTGQTYRSTAPPRAPAITMSTVEVRVAVAFARHAA 419 >gi|296169248|ref|ZP_06850901.1| HNH nuclease [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896146|gb|EFG75813.1| HNH nuclease [Mycobacterium parascrofulaceum ATCC BAA-614] Length=358 Score = 568 bits (1463), Expect = 8e-160, Method: Compositional matrix adjust. Identities = 288/358 (81%), Positives = 316/358 (89%), Gaps = 0/358 (0%) Query 67 EIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRR 126 E+ALARRDSPARG RHLGFAKALV EMPHTLAAL+ GALSEWRATLIVRESACLDV DRR Sbjct 1 EVALARRDSPARGGRHLGFAKALVCEMPHTLAALERGALSEWRATLIVRESACLDVEDRR 60 Query 127 ALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMT 186 ALDAELC DP L GMGDARV AAA+AIAYRLDP AVV+RAA AE +RTVTIRPAPDTMT Sbjct 61 ALDAELCADPASLSGMGDARVAAAAKAIAYRLDPHAVVERAARAEQERTVTIRPAPDTMT 120 Query 187 YLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVM 246 YLTALLPVAQGVSVYAAL R ADTR DGRSRGQVMADTLVERVTGR AAVP+PIAVNLV+ Sbjct 121 YLTALLPVAQGVSVYAALRREADTRGDGRSRGQVMADTLVERVTGRSAAVPSPIAVNLVL 180 Query 247 SDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMES 306 SD+TLLG + PA + GYGPIPAAVAR MV SAV D+RSRATLRRLYAHP+ GALV+MES Sbjct 181 SDQTLLGGDHAPADIAGYGPIPAAVARAMVGSAVADRRSRATLRRLYAHPRTGALVAMES 240 Query 307 RARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAK 366 R+R+FPRGLAAFI LRDQRCRTPYCDAP+RHRDHA PWADGG T+A NGLG CE CNY K Sbjct 241 RSRIFPRGLAAFIGLRDQRCRTPYCDAPVRHRDHAQPWADGGATTADNGLGLCENCNYVK 300 Query 367 QAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALARYAA 424 ++ GWRV+T+VDEN THTA F TPTG +RS APP P +TVSELE+R+G++LAR+AA Sbjct 301 ESAGWRVTTTVDENRTHTALFTTPTGKSYRSAAPPRAPTITVSELEIRVGVSLARHAA 358 >gi|254776396|ref|ZP_05217912.1| hypothetical protein MaviaA2_17254 [Mycobacterium avium subsp. avium ATCC 25291] Length=361 Score = 566 bits (1458), Expect = 3e-159, Method: Compositional matrix adjust. Identities = 289/361 (81%), Positives = 313/361 (87%), Gaps = 0/361 (0%) Query 64 LASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVA 123 +ASE+ALARRDSPARG RHLGFAKALV+EMPHTLAAL+CGALSEWRATLIVRESACLD Sbjct 1 MASEVALARRDSPARGGRHLGFAKALVHEMPHTLAALECGALSEWRATLIVRESACLDAE 60 Query 124 DRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPD 183 DRRALDAELC DP L GMGDARV AAA+AIAYRLDP AVV+RAA AENDRTVTIRPAPD Sbjct 61 DRRALDAELCADPAGLSGMGDARVAAAAKAIAYRLDPHAVVERAAKAENDRTVTIRPAPD 120 Query 184 TMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVN 243 TMTYLTALLPVAQGVSVYAAL R ADTR DGR RGQVMADTLVERVTGR A VPTP+AVN Sbjct 121 TMTYLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERVTGRRATVPTPVAVN 180 Query 244 LVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVS 303 LV+SDETLLG A+ P ++ GYGPIPAAVAR MVA+A D RSRATLRRLYAHP+AGALV+ Sbjct 181 LVLSDETLLGGADAPGEISGYGPIPAAVARRMVANAAADPRSRATLRRLYAHPRAGALVA 240 Query 304 MESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCN 363 MESRARLFP+GLA FI LRDQRCRTPYCDAPIRHRDHA PWADGG TSA NGLG CE CN Sbjct 241 MESRARLFPQGLARFIGLRDQRCRTPYCDAPIRHRDHAQPWADGGATSAGNGLGLCEHCN 300 Query 364 YAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALARYA 423 Y K+ GW VS VDE H HTA F TPTG +RS APP PA+T+S++EVR+ +A AR+A Sbjct 301 YVKETAGWTVSAGVDETHIHTALFTTPTGQTYRSTAPPRAPAITMSKVEVRVAVAFARHA 360 Query 424 A 424 A Sbjct 361 A 361 >gi|298526546|ref|ZP_07013955.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298496340|gb|EFI31634.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=296 Score = 559 bits (1440), Expect = 4e-157, Method: Compositional matrix adjust. Identities = 279/289 (97%), Positives = 280/289 (97%), Gaps = 0/289 (0%) Query 136 PGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVA 195 P G VVAAARAIA+RLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVA Sbjct 8 PATWRGWAMRGVVAAARAIAHRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVA 67 Query 196 QGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAA 255 QGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAA Sbjct 68 QGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAA 127 Query 256 NTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGL 315 NTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGL Sbjct 128 NTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGL 187 Query 316 AAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVST 375 AAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVST Sbjct 188 AAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVST 247 Query 376 SVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALARYAA 424 SVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALARYAA Sbjct 248 SVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALARYAA 296 >gi|254550391|ref|ZP_05140838.1| hypothetical protein Mtube_08010 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|308231826|ref|ZP_07663944.1| hypothetical protein TMAG_03382 [Mycobacterium tuberculosis SUMu001] gi|308369785|ref|ZP_07666807.1| hypothetical protein TMBG_01206 [Mycobacterium tuberculosis SUMu002] 11 more sequence titles Length=429 Score = 556 bits (1434), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 312/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 1 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 60 Query 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 61 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 120 Query 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 121 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 180 Query 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 RPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A Sbjct 181 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 240 Query 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 241 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 300 Query 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 301 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 360 Query 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 361 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 419 Query 416 GIAL 419 G+AL Sbjct 420 GVAL 423 >gi|323720131|gb|EGB29235.1| hypothetical protein TMMG_02079 [Mycobacterium tuberculosis CDC1551A] Length=429 Score = 555 bits (1430), Expect = 6e-156, Method: Compositional matrix adjust. Identities = 311/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 1 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 60 Query 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 61 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 120 Query 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 121 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 180 Query 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 RPAPDTMT++TALLPVA+GVSVYAAL RAA+T D R+RGQVMADTLVERVTG+ A Sbjct 181 RPAPDTMTWVTALLPVARGVSVYAALKRAAETTFDDRTRGQVMADTLVERVTGQPAEAAQ 240 Query 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 241 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 300 Query 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 301 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 360 Query 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 361 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 419 Query 416 GIAL 419 G+AL Sbjct 420 GVAL 423 >gi|308375447|ref|ZP_07443945.2| hypothetical protein TMGG_01948 [Mycobacterium tuberculosis SUMu007] gi|308346301|gb|EFP35152.1| hypothetical protein TMGG_01948 [Mycobacterium tuberculosis SUMu007] Length=503 Score = 554 bits (1428), Expect = 1e-155, Method: Compositional matrix adjust. Identities = 312/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 75 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 134 Query 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 135 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 194 Query 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 195 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 254 Query 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 RPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A Sbjct 255 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 314 Query 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 315 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 374 Query 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 375 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 434 Query 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 435 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 493 Query 416 GIAL 419 G+AL Sbjct 494 GVAL 497 >gi|15608518|ref|NP_215894.1| hypothetical protein Rv1378c [Mycobacterium tuberculosis H37Rv] gi|148661169|ref|YP_001282692.1| hypothetical protein MRA_1387 [Mycobacterium tuberculosis H37Ra] gi|167968430|ref|ZP_02550707.1| hypothetical protein MtubH3_10496 [Mycobacterium tuberculosis H37Ra] gi|1621260|emb|CAB02639.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505321|gb|ABQ73130.1| hypothetical protein MRA_1387 [Mycobacterium tuberculosis H37Ra] Length=475 Score = 554 bits (1427), Expect = 1e-155, Method: Compositional matrix adjust. Identities = 312/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 Query 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 Query 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 Query 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 RPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A Sbjct 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 Query 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 Query 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 Query 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 465 Query 416 GIAL 419 G+AL Sbjct 466 GVAL 469 >gi|31792572|ref|NP_855065.1| hypothetical protein Mb1413c [Mycobacterium bovis AF2122/97] gi|31618161|emb|CAD94274.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] Length=475 Score = 553 bits (1426), Expect = 1e-155, Method: Compositional matrix adjust. Identities = 312/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 Query 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 Query 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 Query 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 RPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A Sbjct 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 Query 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 Query 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 Query 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 465 Query 416 GIAL 419 G+AL Sbjct 466 GVAL 469 >gi|289554832|ref|ZP_06444042.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289439464|gb|EFD21957.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] Length=443 Score = 553 bits (1426), Expect = 1e-155, Method: Compositional matrix adjust. Identities = 312/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 15 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 74 Query 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 75 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 134 Query 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 135 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 194 Query 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 RPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A Sbjct 195 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 254 Query 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 255 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 314 Query 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 315 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 374 Query 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 375 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 433 Query 416 GIAL 419 G+AL Sbjct 434 GVAL 437 >gi|121637308|ref|YP_977531.1| hypothetical protein BCG_1439c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822599|ref|YP_001287352.1| hypothetical protein TBFG_11407 [Mycobacterium tuberculosis F11] gi|224989783|ref|YP_002644470.1| hypothetical protein JTY_1414 [Mycobacterium bovis BCG str. Tokyo 172] 29 more sequence titles Length=475 Score = 553 bits (1426), Expect = 2e-155, Method: Compositional matrix adjust. Identities = 312/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 Query 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 Query 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 Query 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 RPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A Sbjct 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 Query 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 Query 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 Query 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 465 Query 416 GIAL 419 G+AL Sbjct 466 GVAL 469 >gi|308371953|ref|ZP_07667276.1| hypothetical protein TMDG_03491 [Mycobacterium tuberculosis SUMu004] gi|308377714|ref|ZP_07668578.1| hypothetical protein TMIG_03060 [Mycobacterium tuberculosis SUMu009] gi|308380062|ref|ZP_07669111.1| hypothetical protein TMKG_01882 [Mycobacterium tuberculosis SUMu011] gi|308334956|gb|EFP23807.1| hypothetical protein TMDG_03491 [Mycobacterium tuberculosis SUMu004] gi|308354872|gb|EFP43723.1| hypothetical protein TMIG_03060 [Mycobacterium tuberculosis SUMu009] gi|308362760|gb|EFP51611.1| hypothetical protein TMKG_01882 [Mycobacterium tuberculosis SUMu011] Length=420 Score = 552 bits (1423), Expect = 3e-155, Method: Compositional matrix adjust. Identities = 309/415 (75%), Positives = 342/415 (83%), Gaps = 4/415 (0%) Query 8 IDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRGLASE 67 +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA RRGRG+ASE Sbjct 1 MDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASE 60 Query 68 IALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRA 127 +ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESACLDV DRRA Sbjct 61 VALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRA 120 Query 128 LDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTY 187 LDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTIRPAPDTMT+ Sbjct 121 LDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTW 180 Query 188 LTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMS 247 +TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A P+AVNLV+S Sbjct 181 VTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLS 240 Query 248 DETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESR 307 DETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++GALV+MESR Sbjct 241 DETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESR 300 Query 308 ARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQ 367 AR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+CERCNY K+ Sbjct 301 ARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKE 360 Query 368 APGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRIGIAL 419 APGWRVST DE HTAEF TPTG + APP LP + VS++E RIG+AL Sbjct 361 APGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARIGVAL 414 >gi|289574045|ref|ZP_06454272.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289538476|gb|EFD43054.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length=475 Score = 552 bits (1423), Expect = 3e-155, Method: Compositional matrix adjust. Identities = 311/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AG+PA Sbjct 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGLPAR 106 Query 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 Query 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 Query 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 RPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A Sbjct 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 Query 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 Query 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 Query 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 465 Query 416 GIAL 419 G+AL Sbjct 466 GVAL 469 >gi|340626392|ref|YP_004744844.1| hypothetical protein MCAN_13941 [Mycobacterium canettii CIPT 140010059] gi|340004582|emb|CCC43726.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=475 Score = 552 bits (1422), Expect = 4e-155, Method: Compositional matrix adjust. Identities = 310/419 (74%), Positives = 344/419 (83%), Gaps = 4/419 (0%) Query 4 TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRG 63 +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA RRGRG Sbjct 52 SLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRG 111 Query 64 LASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVA 123 +ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESACLDV Sbjct 112 VASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVE 171 Query 124 DRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPD 183 DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTIRPAPD Sbjct 172 DRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPD 231 Query 184 TMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVN 243 TMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A P+AVN Sbjct 232 TMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVN 291 Query 244 LVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVS 303 LV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++GALV+ Sbjct 292 LVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVA 351 Query 304 MESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCN 363 MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+CERCN Sbjct 352 MESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCN 411 Query 364 YAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRIGIAL 419 Y K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RIG+AL Sbjct 412 YVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARIGVAL 469 >gi|339631445|ref|YP_004723087.1| hypothetical protein MAF_14000 [Mycobacterium africanum GM041182] gi|339330801|emb|CCC26472.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=475 Score = 551 bits (1421), Expect = 6e-155, Method: Compositional matrix adjust. Identities = 311/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 Query 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 Query 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 CL+V DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 167 CLEVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 Query 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 RPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A Sbjct 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 Query 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 Query 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 Query 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 465 Query 416 GIAL 419 G+AL Sbjct 466 GVAL 469 >gi|15840836|ref|NP_335873.1| hypothetical protein MT1422 [Mycobacterium tuberculosis CDC1551] gi|13881034|gb|AAK45687.1| hypothetical protein MT1422 [Mycobacterium tuberculosis CDC1551] Length=475 Score = 551 bits (1421), Expect = 6e-155, Method: Compositional matrix adjust. Identities = 311/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 Query 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 Query 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 Query 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 RPAPDTMT++TALLPVA+GVSVYAAL RAA+T D R+RGQVMADTLVERVTG+ A Sbjct 227 RPAPDTMTWVTALLPVARGVSVYAALKRAAETTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 Query 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 Query 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 Query 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 465 Query 416 GIAL 419 G+AL Sbjct 466 GVAL 469 >gi|108798576|ref|YP_638773.1| hypothetical protein Mmcs_1606 [Mycobacterium sp. MCS] gi|119867676|ref|YP_937628.1| hypothetical protein Mkms_1631 [Mycobacterium sp. KMS] gi|108768995|gb|ABG07717.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119693765|gb|ABL90838.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=430 Score = 543 bits (1399), Expect = 2e-152, Method: Compositional matrix adjust. Identities = 295/414 (72%), Positives = 335/414 (81%), Gaps = 2/414 (0%) Query 11 DAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRGLASEIAL 70 +A E ALIERIA LER KSAAAA QARA A +D RRAAE AAGVPA +RGRGLASE+AL Sbjct 13 EASETALIERIAALERAKSAAAAAQARATALLDEKRRAAEAAAGVPANKRGRGLASEVAL 72 Query 71 ARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDA 130 AR D P +G RHLGFA+ALV+EMPHTLAAL+CGALSEWRATLIVRESACL V DRR LDA Sbjct 73 ARHDCPNKGGRHLGFARALVHEMPHTLAALECGALSEWRATLIVRESACLSVEDRRMLDA 132 Query 131 ELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTA 190 ELC D LEG+GD R+ A A+ IAYRLDPQAVVDRAA A ++RTVT RPAPDTMTY+TA Sbjct 133 ELCRDVSRLEGLGDKRIEAEAKRIAYRLDPQAVVDRAAKAASERTVTCRPAPDTMTYVTA 192 Query 191 LLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDET 250 LLPVAQGV+VYAAL R+ADT D RSRGQVMADTLVERVTG A V P+AVNLV++DE Sbjct 193 LLPVAQGVAVYAALKRSADTTFDDRSRGQVMADTLVERVTGCPAEVAVPVAVNLVITDEA 252 Query 251 LLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARL 310 LLG PA + GYGP+PAAV R +V +AVTD+RS+ATLRRLY P++GALV+MESR+R Sbjct 253 LLGGDPEPAVISGYGPVPAAVGRRLVDAAVTDKRSKATLRRLYRRPRSGALVAMESRSRC 312 Query 311 FPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPG 370 FP+GLAAFI+LRDQ CRTPYCDAPIRH DHA P GGPTSA NGLG C CNYAK+APG Sbjct 313 FPKGLAAFIDLRDQTCRTPYCDAPIRHHDHARPHRAGGPTSAANGLGECAACNYAKEAPG 372 Query 371 WRVSTSVDENHTHTAEFITPTGSRHRSGAPPH--LPAVTVSELEVRIGIALARY 422 WRV+TS D H A F TPTG+++ S APP + V +S+LEVRIGI LA + Sbjct 373 WRVATSCDAEGRHRATFTTPTGTQYHSTAPPSPGMTVVNLSDLEVRIGIELAAF 426 >gi|289571279|ref|ZP_06451506.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289545033|gb|EFD48681.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=263 Score = 534 bits (1376), Expect = 1e-149, Method: Compositional matrix adjust. Identities = 263/263 (100%), Positives = 263/263 (100%), Gaps = 0/263 (0%) Query 162 AVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVM 221 AVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVM Sbjct 1 AVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVM 60 Query 222 ADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVT 281 ADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVT Sbjct 61 ADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVT 120 Query 282 DQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHA 341 DQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHA Sbjct 121 DQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHA 180 Query 342 HPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPP 401 HPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPP Sbjct 181 HPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPP 240 Query 402 HLPAVTVSELEVRIGIALARYAA 424 HLPAVTVSELEVRIGIALARYAA Sbjct 241 HLPAVTVSELEVRIGIALARYAA 263 >gi|126432903|ref|YP_001068594.1| hypothetical protein Mjls_0290 [Mycobacterium sp. JLS] gi|126232703|gb|ABN96103.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=411 Score = 523 bits (1346), Expect = 3e-146, Method: Compositional matrix adjust. Identities = 285/393 (73%), Positives = 327/393 (84%), Gaps = 0/393 (0%) Query 8 IDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRGLASE 67 +D + +EAALIERIA LER KSAAAA QARA A +D RRAAE AAGVPA +RGRGLASE Sbjct 2 VDTEIDEAALIERIAALERAKSAAAAAQARATALLDEKRRAAEAAAGVPANKRGRGLASE 61 Query 68 IALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRA 127 +ALAR D P +G RHLGFA+ LV+EMPHTLAAL+CGALSEWRATLIVRESACL V DRR+ Sbjct 62 VALARHDCPNKGGRHLGFARVLVHEMPHTLAALECGALSEWRATLIVRESACLSVEDRRS 121 Query 128 LDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTY 187 LD ELC D LEG+GD R+ A A+ IAYRLDPQAVVDRAA A ++RTVT RPAPDTMTY Sbjct 122 LDTELCRDVSSLEGLGDKRIEAEAKKIAYRLDPQAVVDRAARAASERTVTCRPAPDTMTY 181 Query 188 LTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMS 247 +TALLPVAQGV+VYAAL R+ADT D RSRGQVMADTLVERVTG A V P+AVNLV++ Sbjct 182 VTALLPVAQGVAVYAALKRSADTTFDDRSRGQVMADTLVERVTGCPAEVAVPVAVNLVIT 241 Query 248 DETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESR 307 DE LLG PA + GYGP+PAAV R +V +AVTD+RS+ATLRRLY P++GALV+MESR Sbjct 242 DEALLGGDPEPAVISGYGPVPAAVGRRLVDAAVTDKRSKATLRRLYRRPRSGALVAMESR 301 Query 308 ARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQ 367 AR FP+GLAAFI+LRDQ CRTPYC+APIRH DHA P GGPTSA NGLG CE+CNYAK+ Sbjct 302 ARCFPKGLAAFIDLRDQTCRTPYCNAPIRHHDHARPHRAGGPTSAANGLGECEQCNYAKE 361 Query 368 APGWRVSTSVDENHTHTAEFITPTGSRHRSGAP 400 APGW+V+ ++DE THTAEF TPTG+ +RS AP Sbjct 362 APGWQVTAAIDETGTHTAEFTTPTGAVYRSTAP 394 >gi|254821166|ref|ZP_05226167.1| hypothetical protein MintA_14612 [Mycobacterium intracellulare ATCC 13950] Length=335 Score = 521 bits (1342), Expect = 8e-146, Method: Compositional matrix adjust. Identities = 261/335 (78%), Positives = 293/335 (88%), Gaps = 0/335 (0%) Query 90 VYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAELCGDPGDLEGMGDARVVA 149 ++EMPHTLAAL+CGALSEWRATLIVRESACLDV DRRALDAE+C DP L GMGDARV A Sbjct 1 MHEMPHTLAALECGALSEWRATLIVRESACLDVEDRRALDAEMCADPSSLSGMGDARVAA 60 Query 150 AARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAAD 209 AA+AIAYRLDP A+V+RAA AE RTVTIRPAPDTM+Y+TALLPVAQGVSVYA L R AD Sbjct 61 AAKAIAYRLDPHAIVERAAKAEEGRTVTIRPAPDTMSYVTALLPVAQGVSVYATLRREAD 120 Query 210 TRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAANTPAQLCGYGPIPA 269 T DGR+RGQVMADTLVERVTGR A VPTP+AVNL ++DETLLG + PA + GYGPIPA Sbjct 121 TCGDGRTRGQVMADTLVERVTGRSATVPTPVAVNLALTDETLLGGDDAPADVAGYGPIPA 180 Query 270 AVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTP 329 +VAR+MVA A D+RSRATLRRLY HPQ+GALV+MESRARLFP+GLAAFI LRDQ CRTP Sbjct 181 SVARSMVAEAAADRRSRATLRRLYTHPQSGALVAMESRARLFPQGLAAFIGLRDQHCRTP 240 Query 330 YCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFIT 389 YCDAPIRHRDHA PWADGGPT+A NGLG CE+CNY K+ GWRVSTSVDENHTHTA F T Sbjct 241 YCDAPIRHRDHAQPWADGGPTTAGNGLGLCEQCNYVKENAGWRVSTSVDENHTHTALFTT 300 Query 390 PTGSRHRSGAPPHLPAVTVSELEVRIGIALARYAA 424 PTG+ +RS APP P +T+S+LEVR+G+ALAR+AA Sbjct 301 PTGTTYRSTAPPRGPTITMSKLEVRVGVALARHAA 335 >gi|289553135|ref|ZP_06442345.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289437767|gb|EFD20260.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] Length=296 Score = 515 bits (1327), Expect = 4e-144, Method: Compositional matrix adjust. Identities = 253/254 (99%), Positives = 254/254 (100%), Gaps = 0/254 (0%) Query 171 ENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVT 230 +NDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVT Sbjct 43 KNDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVT 102 Query 231 GRDAAVPTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLR 290 GRDAAVPTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLR Sbjct 103 GRDAAVPTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLR 162 Query 291 RLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPT 350 RLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPT Sbjct 163 RLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPT 222 Query 351 SAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSE 410 SAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSE Sbjct 223 SAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSE 282 Query 411 LEVRIGIALARYAA 424 LEVRIGIALARYAA Sbjct 283 LEVRIGIALARYAA 296 >gi|240168682|ref|ZP_04747341.1| hypothetical protein MkanA1_05175 [Mycobacterium kansasii ATCC 12478] Length=333 Score = 509 bits (1312), Expect = 2e-142, Method: Compositional matrix adjust. Identities = 270/333 (82%), Positives = 298/333 (90%), Gaps = 1/333 (0%) Query 92 EMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAELCGDPGDLEGMGDARVVAAA 151 EMPHTLAAL+ GALSEWRATLIVRESACLDVADRR LDAELCGDP +L+G+GDARV AAA Sbjct 2 EMPHTLAALERGALSEWRATLIVRESACLDVADRRTLDAELCGDPANLDGLGDARVAAAA 61 Query 152 RAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTR 211 +AIA RLDP AV DRAA A +R VTIRPAPDTM+Y+TALLPVAQGVSVYAAL R AD Sbjct 62 KAIACRLDPHAVADRAATAAEERRVTIRPAPDTMSYVTALLPVAQGVSVYAALCREADAC 121 Query 212 CDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAV 271 DGR RGQVMADTLVERVTGR A VP PIAVNLV+SDETLLGA + PA +CGYGPIPAAV Sbjct 122 RDGRPRGQVMADTLVERVTGRAATVPAPIAVNLVLSDETLLGADSAPADVCGYGPIPAAV 181 Query 272 ARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYC 331 AR MVA V D RSRATLRRLYAHP++GALV+MESR+RLFPRGLAAFIELRDQRCRTPYC Sbjct 182 ARAMVADTVADPRSRATLRRLYAHPRSGALVAMESRSRLFPRGLAAFIELRDQRCRTPYC 241 Query 332 DAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPT 391 DAPIRHRDHA PWA+GG T+A+NGLG+CERCNYAKQAPGW+V+T+ DENHTHTAEF TPT Sbjct 242 DAPIRHRDHARPWAEGGATTANNGLGSCERCNYAKQAPGWQVTTN-DENHTHTAEFTTPT 300 Query 392 GSRHRSGAPPHLPAVTVSELEVRIGIALARYAA 424 G R+RSGAPP +P +TVS++EVRIGIALAR+AA Sbjct 301 GKRYRSGAPPRIPPITVSDVEVRIGIALARHAA 333 >gi|108797279|ref|YP_637476.1| hypothetical protein Mmcs_0299 [Mycobacterium sp. MCS] gi|119866364|ref|YP_936316.1| hypothetical protein Mkms_0309 [Mycobacterium sp. KMS] gi|108767698|gb|ABG06420.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692453|gb|ABL89526.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=377 Score = 502 bits (1293), Expect = 4e-140, Method: Compositional matrix adjust. Identities = 261/359 (73%), Positives = 300/359 (84%), Gaps = 0/359 (0%) Query 42 VDAARRAAEGAAGVPAARRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALD 101 +D RRAAE AAGVPA +RGRGLASE+ALAR D P +G RHLGFA+ LV+EMPHTLAAL+ Sbjct 2 LDEKRRAAEAAAGVPANKRGRGLASEVALARHDCPNKGGRHLGFARVLVHEMPHTLAALE 61 Query 102 CGALSEWRATLIVRESACLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQ 161 CGALSEWRATLIVRESACL V DRR+LD ELC D LEG+GD R+ A A+ IAYRLDPQ Sbjct 62 CGALSEWRATLIVRESACLSVEDRRSLDTELCRDVSSLEGLGDKRIEAEAKKIAYRLDPQ 121 Query 162 AVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVM 221 AVVDRAA A ++RTVT RPAPDTMTY+TALLPVAQGV+VYAAL R+ADT D RSRGQVM Sbjct 122 AVVDRAARAASERTVTCRPAPDTMTYVTALLPVAQGVAVYAALKRSADTTFDDRSRGQVM 181 Query 222 ADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVT 281 ADTLVERVTG A V P+AVNLV++DE LLG PA + GYGP+PAAV R +V +AVT Sbjct 182 ADTLVERVTGCPAEVAVPVAVNLVITDEALLGGDPEPAVISGYGPVPAAVGRRLVDAAVT 241 Query 282 DQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHA 341 D+RS+ATLRRLY P++GALV+MESRAR FP+GLAAFI+LRDQ CRTPYC+APIRH DHA Sbjct 242 DKRSKATLRRLYRRPRSGALVAMESRARCFPKGLAAFIDLRDQTCRTPYCNAPIRHHDHA 301 Query 342 HPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAP 400 P GGPTSA NGLG CE+CNYAK+APGW+V+ ++DE THTAEF TPTG+ +RS AP Sbjct 302 RPHRAGGPTSAANGLGECEQCNYAKEAPGWQVTAAIDETGTHTAEFTTPTGAVYRSTAP 360 >gi|108801662|ref|YP_641859.1| hypothetical protein Mmcs_4699 [Mycobacterium sp. MCS] gi|119870813|ref|YP_940765.1| hypothetical protein Mkms_4785 [Mycobacterium sp. KMS] gi|108772081|gb|ABG10803.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696902|gb|ABL93975.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=434 Score = 500 bits (1287), Expect = 2e-139, Method: Compositional matrix adjust. Identities = 267/427 (63%), Positives = 323/427 (76%), Gaps = 5/427 (1%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE++ +DPDA EA L ++ +LERLKS+AAA QARA A A RRA E A+G+P +R Sbjct 9 MFESVFDVDPDAGEAELRAQVEQLERLKSSAAAAQARATALWAAKRRATEAASGMPKRKR 68 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRGLA+E+ALAR+D+P G+ HLG A+ALV+EMPHTLAAL+CGALSEWRATLIV++SACL Sbjct 69 GRGLATEVALARKDAPVCGNTHLGMARALVHEMPHTLAALECGALSEWRATLIVKQSACL 128 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 V RR LDAELC D L+G G+ R+ A A+ I RLD AVV R+A A DR VTIRP Sbjct 129 SVEHRRHLDAELCADVSKLDGWGNRRIEAEAKKITTRLDAAAVVARSAKAAGDRCVTIRP 188 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 AP TM Y+TALLPVAQGV+VYAAL R ADT D RSRGQVMADTLVERVTGR A P P+ Sbjct 189 APGTMAYVTALLPVAQGVAVYAALKREADTTFDDRSRGQVMADTLVERVTGRPAEKPVPV 248 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 ++NL ++D TL+G + P GYGP+PA V R +V+ AV D+ ++ATLRRLY HP +G Sbjct 249 SLNLALADTTLVGDDDEPGWCEGYGPVPAGVVRALVSDAVADEAAKATLRRLYRHPASGQ 308 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MES+AR FP+GLAAFI++RDQ CRTPYC+APIRH DHA P GGPTSA NGLG CE Sbjct 309 LVAMESKARTFPKGLAAFIDIRDQTCRTPYCNAPIRHHDHAEPHRQGGPTSARNGLGECE 368 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTV---SELEVRIGI 417 CNYAK+APGW V+TS D+ H AEF TPTG+ +RS APP LP V S +E + I Sbjct 369 GCNYAKEAPGWTVTTS-DDGGEHRAEFRTPTGATYRSTAPP-LPGPPVYARSIIEGGLSI 426 Query 418 ALARYAA 424 + R+AA Sbjct 427 DIVRFAA 433 >gi|126437648|ref|YP_001073339.1| hypothetical protein Mjls_5084 [Mycobacterium sp. JLS] gi|126237448|gb|ABO00849.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=434 Score = 499 bits (1286), Expect = 3e-139, Method: Compositional matrix adjust. Identities = 267/427 (63%), Positives = 321/427 (76%), Gaps = 5/427 (1%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE+ +DPDA EA L ++ +LERLKS+AAA QARA A A RRA E A+G+P +R Sbjct 9 MFESAFDVDPDAGEAELRAQVEQLERLKSSAAAAQARATALWAAKRRATEAASGMPKRKR 68 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRGLA+E+ALAR+D+P G+ HLG A+ALV+EMPHTLAAL+CGALSEWRATLIV++SACL Sbjct 69 GRGLATEVALARKDAPVCGNTHLGMARALVHEMPHTLAALECGALSEWRATLIVKQSACL 128 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 V RR LDAELC D L+G G+ R+ A A+ I RLD AVV R+A A DR VTIRP Sbjct 129 SVEHRRHLDAELCADVSKLDGWGNRRIEAEAKKITTRLDAAAVVARSAKAAGDRCVTIRP 188 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 APDTM Y+TALLPVAQGV+VYAAL R ADT D RSRGQVMADTLVERVTGR A P P+ Sbjct 189 APDTMAYVTALLPVAQGVAVYAALKREADTTFDDRSRGQVMADTLVERVTGRPAEKPVPV 248 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 ++NL ++D TL+G + P GYGP+PA V R +V AV D+ ++ATLRRLY HP +G Sbjct 249 SLNLALADTTLVGDDDEPGWCEGYGPVPAGVVRALVGDAVADEAAKATLRRLYRHPASGQ 308 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MES+AR FP+GLAAFI++RDQ CRTPYC+APIRH DHA P GGPTSA NGLG CE Sbjct 309 LVAMESKARTFPKGLAAFIDIRDQTCRTPYCNAPIRHHDHAEPHRQGGPTSARNGLGECE 368 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTV---SELEVRIGI 417 CNYAK+ PGW V+TS D+ H AEF TPTG+ +RS APP LP V S +E + I Sbjct 369 GCNYAKETPGWTVTTS-DDGGEHRAEFRTPTGATYRSTAPP-LPGPPVYARSIIEGGLSI 426 Query 418 ALARYAA 424 + R+AA Sbjct 427 DIVRFAA 433 >gi|118469447|ref|YP_890248.1| hypothetical protein MSMEG_6025 [Mycobacterium smegmatis str. MC2 155] gi|118170734|gb|ABK71630.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=438 Score = 496 bits (1278), Expect = 2e-138, Method: Compositional matrix adjust. Identities = 268/428 (63%), Positives = 318/428 (75%), Gaps = 5/428 (1%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE+L IDP A EA L +RI + ER+KSAAAA QA A+ + RRAAE AAG+PA+RR Sbjct 11 MFESLFDIDPQASEAELRDRIEQFERMKSAAAAAQATASVLWEQKRRAAEAAAGIPASRR 70 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRGLA+E+ALARR+SP G RHLG A ALV E+PHTLAAL CGALSEWRATLI RESACL Sbjct 71 GRGLATEVALARRESPNAGGRHLGLAHALVDELPHTLAALRCGALSEWRATLIARESACL 130 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 RR LDAEL DP +G GDARV A A+ IA RL+ AV+DR+A AE DR VTIRP Sbjct 131 SPELRRELDAELSADPSRFDGWGDARVAAEAKKIACRLNIDAVLDRSAKAEKDRRVTIRP 190 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 APD MT LT LLP+ QGV+VYAAL +AA D R+RGQVMADTLVERVTGR A P P+ Sbjct 191 APDAMTKLTVLLPLKQGVAVYAALHQAAMVNADDRNRGQVMADTLVERVTGRPAHAPVPV 250 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 +NLVM+D TL G + P + GYGP+PA VAR MVA A D+ ++A +RRL+ HP++G Sbjct 251 NLNLVMADTTLFGEDDQPGWVQGYGPVPAEVARRMVADATLDENTKAAVRRLFRHPKSGQ 310 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MESR+R+FP+GLA FI LRDQ CRTPYCDA IRHRDHA P DGGPT+AHNGLGTCE Sbjct 311 LVAMESRSRIFPKGLATFIGLRDQTCRTPYCDALIRHRDHAVPHHDGGPTTAHNGLGTCE 370 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA----VTVSELEVRIG 416 CNYAK+APGW V + + H AE++TPTG+ +RS APP LP T+S +E + Sbjct 371 ACNYAKEAPGWSVIITETSDGEHIAEYVTPTGAVYRSTAPP-LPGRPVRHTLSLVETGLT 429 Query 417 IALARYAA 424 I L + A Sbjct 430 IDLVTFDA 437 >gi|307083945|ref|ZP_07493058.1| hypothetical protein TMLG_03064 [Mycobacterium tuberculosis SUMu012] gi|308366414|gb|EFP55265.1| hypothetical protein TMLG_03064 [Mycobacterium tuberculosis SUMu012] Length=353 Score = 490 bits (1262), Expect = 1e-136, Method: Compositional matrix adjust. Identities = 261/348 (75%), Positives = 287/348 (83%), Gaps = 4/348 (1%) Query 75 SPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAELCG 134 SPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESACLDV DRRALDAELC Sbjct 1 SPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAELCA 60 Query 135 DPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPV 194 D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTIRPAPDTMT++TALLPV Sbjct 61 DMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLPV 120 Query 195 AQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETLLGA 254 A+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A P+AVNLV+SDETLL Sbjct 121 ARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAG 180 Query 255 ANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRG 314 PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++GALV+MESRAR FP+G Sbjct 181 DRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKG 240 Query 315 LAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVS 374 LAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+CERCNY K+APGWRVS Sbjct 241 LAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVS 300 Query 375 TSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRIGIAL 419 T DE HTAEF TPTG + APP LP + VS++E RIG+AL Sbjct 301 TDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARIGVAL 347 >gi|120405676|ref|YP_955505.1| hypothetical protein Mvan_4725 [Mycobacterium vanbaalenii PYR-1] gi|119958494|gb|ABM15499.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=426 Score = 477 bits (1227), Expect = 2e-132, Method: Compositional matrix adjust. Identities = 251/401 (63%), Positives = 299/401 (75%), Gaps = 1/401 (0%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE++ +D A +A L + LERLKS AAA QARA A A R+ AE +AGV A R Sbjct 1 MFESMFDVDETASQAELRAAVERLERLKSQAAAAQARATALWAAKRQLAEESAGVRAHHR 60 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 G+GLASE+ALARRD+P +G++HLGFAKALV EMPHTLAAL+ G LSEWRA LIVRESACL Sbjct 61 GKGLASEVALARRDAPVKGNQHLGFAKALVNEMPHTLAALESGVLSEWRANLIVRESACL 120 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 V RR LDAELC D LEG G+ R+ A A+ IA RLD A+V+RA A R V+ RP Sbjct 121 SVEHRRQLDAELCADASGLEGWGNRRIEAEAKKIAARLDAAALVERARKAPEQRCVSCRP 180 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 APD M Y+T LLP+ GV+VYAA RAADT DGR+R QVMADT+ ERVTGR AA P + Sbjct 181 APDNMLYVTVLLPMTHGVAVYAACNRAADTTFDGRTRDQVMADTIYERVTGRSAAEPVSV 240 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 A+NLVM+D TL G P GYGP+PAAV R +V+ AVTD +++ATLRRLY HP++G Sbjct 241 ALNLVMADTTLFGDDEAPGWAQGYGPVPAAVVRDLVSDAVTDAKAKATLRRLYRHPKSGQ 300 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MESR+ LFP+GLA FI LRDQ CRTPYCDAPIRH DHA P +GGPTSA NGLG C+ Sbjct 301 LVAMESRSWLFPKGLATFIGLRDQSCRTPYCDAPIRHHDHAVPDREGGPTSALNGLGECQ 360 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPP 401 CNYAK+APGW V+T+ D + HTA F TPTG+++ S APP Sbjct 361 ACNYAKEAPGWHVTTT-DTDGEHTATFCTPTGAKYFSIAPP 400 >gi|120406245|ref|YP_956074.1| hypothetical protein Mvan_5297 [Mycobacterium vanbaalenii PYR-1] gi|119959063|gb|ABM16068.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=430 Score = 462 bits (1188), Expect = 6e-128, Method: Compositional matrix adjust. Identities = 260/431 (61%), Positives = 304/431 (71%), Gaps = 9/431 (2%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE+L +D A EA L + ERLKS AAA QARA A A RRAAE A GVPAARR Sbjct 1 MFESLFDVDVGASEAELRAAVERCERLKSQAAAAQARATALWAAKRRAAEQARGVPAARR 60 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 G+GLASE+ALAR D+P G+RHLGFA ALV EMPHTLAAL+CGALSEWRATLIVRESACL Sbjct 61 GKGLASEVALARHDAPVLGNRHLGFATALVEEMPHTLAALECGALSEWRATLIVRESACL 120 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 V RRALD ELCGD L G G+ RV A A+ IA RLD A+V+R+ A D VT RP Sbjct 121 SVEHRRALDEELCGDVSRLAGWGNKRVEAEAKTIAARLDAAAIVERSEKAAADCAVTCRP 180 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 AP+ M Y+T LP+ +GV +YAA RAADT DGR RGQVM DT+ ERVTGR A P P+ Sbjct 181 APNNMVYVTLRLPLTRGVGIYAACKRAADTTFDGRPRGQVMTDTVYERVTGRPADTPVPV 240 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVAS---AVTDQRSRATLRRLYAHPQ 297 A+NLVM+D TL G + L GYGP+PA RT++ + A + +ATLRRLY HP Sbjct 241 ALNLVMADTTLAGDDDELGWLDGYGPVPAGFCRTLIGNADDAEAEAEVKATLRRLYRHPT 300 Query 298 AGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLG 357 +G LV+MESRAR+FP+GL ++ RD+ CRTPYCDAPIRH DHA P GGPTSA NGLG Sbjct 301 SGQLVAMESRARIFPKGLGMLLQRRDRTCRTPYCDAPIRHHDHATPDRQGGPTSALNGLG 360 Query 358 TCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTV----SELEV 413 CE CNYAK+APGW V+T D + HTA+F TPTG+ +RS APP LP V S LE Sbjct 361 ECEACNYAKEAPGWTVTTG-DVDGAHTADFETPTGAVYRSTAPP-LPGPPVRRRLSLLEG 418 Query 414 RIGIALARYAA 424 R+ I L + A Sbjct 419 RLSIDLVTFDA 429 >gi|315446192|ref|YP_004079071.1| hypothetical protein Mspyr1_46930 [Mycobacterium sp. Spyr1] gi|315264495|gb|ADU01237.1| hypothetical protein Mspyr1_46930 [Mycobacterium sp. Spyr1] Length=430 Score = 457 bits (1176), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 258/426 (61%), Positives = 302/426 (71%), Gaps = 6/426 (1%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE+L ID A +A L + ERLKSAAAA QARA A A R AAE AAGVP RR Sbjct 1 MFESLFDIDEGASQAELRAVVERCERLKSAAAAAQARATALWAAKRAAAEEAAGVPVRRR 60 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 G+GLASE+ALARRD+P +G +HLGFAKALV+EMPHT AAL+CGALSEWRATLIVRESACL Sbjct 61 GKGLASEVALARRDAPVKGGQHLGFAKALVHEMPHTWAALECGALSEWRATLIVRESACL 120 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 V DRR LD ELC D LEG G+ RV A A+ IA RLD AVV+RA A V+ RP Sbjct 121 SVEDRRRLDEELCADVSTLEGWGNKRVEAEAKKIAARLDVAAVVERADKAAAQARVSCRP 180 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 AP+ M Y T LLP+AQG+ +YAAL ADT DGRSRGQVM DT ER+TGR A P+ Sbjct 181 APNGMVYFTVLLPLAQGIGMYAALKHHADTTFDGRSRGQVMTDTAFERITGRSAGTAVPV 240 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 A+NLVM+D TL G + P L GYGP+PA R + AV D+ +RATLRRLY HP++G Sbjct 241 ALNLVMADTTLAGDDDCPGWLDGYGPVPAGFCRALTGDAVADKGARATLRRLYRHPRSGQ 300 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MESRAR+FP+GLA I+ RDQ CRTPYCDAPIRH DHA P GG TSA NGLG C Sbjct 301 LVAMESRARIFPKGLATLIDRRDQTCRTPYCDAPIRHHDHATPDRAGGKTSAENGLGECA 360 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTV----SELEVRIG 416 CNYAK+APGW+VS ++ +HTA ++TPTG+ H S AP LP V S+ E R+ Sbjct 361 ACNYAKEAPGWQVSAGT-QDGSHTARWVTPTGAVHYSIAPT-LPGPPVRRRISDTEGRLS 418 Query 417 IALARY 422 I L + Sbjct 419 IDLITF 424 >gi|315444664|ref|YP_004077543.1| hypothetical protein Mspyr1_30910 [Mycobacterium sp. Spyr1] gi|315262967|gb|ADT99708.1| hypothetical protein Mspyr1_30910 [Mycobacterium sp. Spyr1] Length=426 Score = 454 bits (1169), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 254/427 (60%), Positives = 300/427 (71%), Gaps = 5/427 (1%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE+L D +A E L + + E LKS AAA QAR A A R AAE AAG+ +R Sbjct 1 MFESLFDYDTEASEKELRVLVEQYEALKSRAAAAQARVTALWAAKRAAAERAAGIGTRKR 60 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 G+GLASEIALAR D+P +G++HLGFA ALV+EMPHTLAAL+CG LSE+RATLIVRESACL Sbjct 61 GKGLASEIALARHDAPVKGNQHLGFANALVHEMPHTLAALECGVLSEYRATLIVRESACL 120 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 RR LD ELC DP L G G+ RV A A+ I RLD AVV+R+A AE DR VT RP Sbjct 121 STEHRRRLDEELCSDPSKLAGWGNNRVEAEAKRITARLDAAAVVERSAKAEQDRCVTTRP 180 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 AP+ M Y+T LLPVAQGV +YAAL RAADT D RSRGQVMADT R+TG+ A P + Sbjct 181 APNCMVYVTVLLPVAQGVGMYAALKRAADTTFDERSRGQVMADTAYARITGKVATQPVSV 240 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 ++NLVM+D TL G PA L GYGP+PA A + AV D+ +ATLRRLY HP +G Sbjct 241 SLNLVMADTTLAGDDTEPAWLDGYGPVPAGFACKLTGDAVADEDVKATLRRLYRHPGSGQ 300 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MESR+R FP+GLAAFI +RD+ CRTPYC+APIRH DHA P DGG TSA NGLG CE Sbjct 301 LVAMESRSRAFPKGLAAFIGIRDRTCRTPYCNAPIRHHDHATPDRDGGRTSAVNGLGLCE 360 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSE---LEVRIGI 417 CNYAK+APGW V+TSV H AEF+TPT + + S APP LP +S +E R I Sbjct 361 ACNYAKEAPGWTVTTSVRAGE-HRAEFVTPTHATYYSIAPP-LPGTRISRRSIVEDRFSI 418 Query 418 ALARYAA 424 L + A Sbjct 419 DLVTFEA 425 >gi|145224332|ref|YP_001135010.1| HNH nuclease [Mycobacterium gilvum PYR-GCK] gi|145216818|gb|ABP46222.1| HNH nuclease [Mycobacterium gilvum PYR-GCK] Length=436 Score = 454 bits (1167), Expect = 2e-125, Method: Compositional matrix adjust. Identities = 254/427 (60%), Positives = 300/427 (71%), Gaps = 5/427 (1%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE+L D +A E L + + E LKS AAA QAR A A R AAE AAG+ +R Sbjct 11 MFESLFDYDTEASEKELRVLVEQYEALKSRAAAAQARVTALWAAKRAAAERAAGIGTRKR 70 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 G+GLASEIALAR D+P +G++HLGFA ALV+EMPHTLAAL+CG LSE+RATLIVRESACL Sbjct 71 GKGLASEIALARHDAPVKGNQHLGFANALVHEMPHTLAALECGVLSEYRATLIVRESACL 130 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 RR LD ELC DP L G G+ RV A A+ I RLD AVV+R+A AE DR VT RP Sbjct 131 SAEHRRRLDEELCSDPSKLAGWGNNRVEAEAKRITARLDAAAVVERSAKAEQDRCVTTRP 190 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 AP+ M Y+T LLPVAQGV +YAAL RAADT D RSRGQVMADT R+TG+ A P + Sbjct 191 APNCMVYVTVLLPVAQGVGMYAALKRAADTTFDERSRGQVMADTAYARITGKVATQPVSV 250 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 ++NLVM+D TL G PA L GYGP+PA A + AV D+ +ATLRRLY HP +G Sbjct 251 SLNLVMADTTLAGDDTEPAWLDGYGPVPAGFACKLTGDAVADEDVKATLRRLYRHPGSGQ 310 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MESR+R FP+GLAAFI +RD+ CRTPYC+APIRH DHA P DGG TSA NGLG CE Sbjct 311 LVAMESRSRAFPKGLAAFIGIRDRTCRTPYCNAPIRHHDHATPDRDGGRTSAVNGLGLCE 370 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSE---LEVRIGI 417 CNYAK+APGW V+TSV H AEF+TPT + + S APP LP +S +E R I Sbjct 371 ACNYAKEAPGWTVTTSVRAGE-HRAEFVTPTHATYYSIAPP-LPGTRISRRSIVEDRFSI 428 Query 418 ALARYAA 424 L + A Sbjct 429 DLVTFEA 435 >gi|145223173|ref|YP_001133851.1| hypothetical protein Mflv_2586 [Mycobacterium gilvum PYR-GCK] gi|145215659|gb|ABP45063.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=430 Score = 453 bits (1165), Expect = 3e-125, Method: Compositional matrix adjust. Identities = 257/426 (61%), Positives = 300/426 (71%), Gaps = 6/426 (1%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE+L ID A +A L + ERLKSAAAA QARA A A R AAE AAGVP RR Sbjct 1 MFESLFDIDEGASQAELRAVVERCERLKSAAAAAQARATALWAAKRAAAEEAAGVPVRRR 60 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 G+GLASE+ALARRD+P +G +HLGFAKAL+ EMPHT AAL+CGALSEWRATLIVRESACL Sbjct 61 GKGLASEVALARRDAPVKGGQHLGFAKALMGEMPHTWAALECGALSEWRATLIVRESACL 120 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 V DRR LD ELC D EG G+ RV A A+ IA RLD AVV+R A V+ RP Sbjct 121 SVEDRRRLDEELCADVSRFEGWGNKRVEAEAKKIAARLDVAAVVERVDRAAAQARVSCRP 180 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 AP+ M Y T LLP+AQG+ +YAAL ADT DGRSRGQVMADT ER+TGR A P+ Sbjct 181 APNGMVYFTVLLPLAQGIGMYAALKHHADTTFDGRSRGQVMADTAFERITGRSAGTAVPV 240 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 A+NLVM+D TL G + P L GYGP+PA R + AV D+ +RATLRRLY HP++G Sbjct 241 ALNLVMADTTLAGDDDCPGWLDGYGPVPAGFCRALTGDAVADKGARATLRRLYRHPRSGQ 300 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MESRARLFP+GLA I+ RDQ CRTPYCDAPIRH DHA P GG TSA NGLG C Sbjct 301 LVAMESRARLFPKGLATLIDRRDQTCRTPYCDAPIRHHDHATPDRAGGKTSAENGLGECA 360 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTV----SELEVRIG 416 CNYAK+APGW+VS ++ +HTA ++TPTG+ H S AP LP V S+ E R+ Sbjct 361 ACNYAKEAPGWQVSAGT-QDGSHTARWVTPTGAVHYSIAPA-LPGPPVRRRISDTEGRLS 418 Query 417 IALARY 422 I L + Sbjct 419 IDLITF 424 >gi|120404582|ref|YP_954411.1| hypothetical protein Mvan_3614 [Mycobacterium vanbaalenii PYR-1] gi|119957400|gb|ABM14405.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=466 Score = 453 bits (1165), Expect = 3e-125, Method: Compositional matrix adjust. Identities = 259/440 (59%), Positives = 302/440 (69%), Gaps = 18/440 (4%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE+L + A EA L + ERLKS AAA QARA A A RRAAE A GVPAA+R Sbjct 28 MFESLFDVGVGASEAELRAAVERCERLKSQAAAAQARATALWAAKRRAAEQAGGVPAAKR 87 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 G+GLASE+ALAR D+P G+RHLGFA+ALV EMPHTLAAL+CGALSEWRATLIVRESACL Sbjct 88 GKGLASEVALARHDAPVLGNRHLGFAQALVEEMPHTLAALECGALSEWRATLIVRESACL 147 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 V RRALD ELCGD L G G+ R+ A A+ IA RLD AVVD A D VT RP Sbjct 148 SVEHRRALDEELCGDVSRLAGWGNKRIEAEAKTIAARLDAAAVVDHTEKAAADCAVTCRP 207 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 AP+ M Y+T LP+ +GV +YAA RAADT DGR RGQVM DT+ ERVTGR A P P+ Sbjct 208 APNNMVYVTLRLPLTRGVGIYAACKRAADTTFDGRPRGQVMTDTVYERVTGRPADTPVPV 267 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAV------------TDQRSRAT 288 A+NLVM+D TL G + L GYGP+PA R ++ +AV D +AT Sbjct 268 ALNLVMADTTLAGDDDELGWLDGYGPVPAGFCRALIGNAVADAHAHADADAEVDAEVKAT 327 Query 289 LRRLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGG 348 LRRLY HP +G LV+MESRAR+FP+GL ++ RD+ CRTPYCDAPIRH DHA P GG Sbjct 328 LRRLYRHPTSGQLVAMESRARIFPKGLGMLLQRRDRTCRTPYCDAPIRHHDHATPDRAGG 387 Query 349 PTSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTV 408 PTSA NGLG CE CNYAK+APGW V+T D + HTA+F TPTG+ +RS APP LP V Sbjct 388 PTSALNGLGECEACNYAKEAPGWTVTTG-DVDGAHTADFETPTGAVYRSTAPP-LPGPPV 445 Query 409 ----SELEVRIGIALARYAA 424 S LE R+ I L + A Sbjct 446 RRRLSLLEGRLSIDLVTFDA 465 >gi|169628995|ref|YP_001702644.1| hypothetical protein MAB_1907 [Mycobacterium abscessus ATCC 19977] gi|169240962|emb|CAM61990.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=398 Score = 440 bits (1132), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 242/395 (62%), Positives = 293/395 (75%), Gaps = 3/395 (0%) Query 8 IDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRGLASE 67 +DP A L++RIAELER+K+AAAA QA AA +D ARR E A GVP R+G G+A+E Sbjct 4 LDPATRAAQLVDRIAELERVKAAAAAEQAHAAVLLDRARREEEAANGVPRRRQGAGVATE 63 Query 68 IALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRA 127 IALAR+DSPARGSRHLGFAKALV EMPHTLAAL+CGALSEWRAT++VRE+A L V DR+ Sbjct 64 IALARQDSPARGSRHLGFAKALVNEMPHTLAALECGALSEWRATILVRETAYLAVEDRQK 123 Query 128 LDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTY 187 +D E+C + L G+GD R+ A A+ +AYRLD QAVV RA AE++R V++RPAPDTMTY Sbjct 124 IDVEMCAETSRLRGLGDTRLAAEAKRLAYRLDAQAVVRRARRAESERRVSLRPAPDTMTY 183 Query 188 LTALLPVAQGVSVYAALTRAADTRCDG-RSRGQVMADTLVERVTGRDAAVPTPIAVNLVM 246 LTALLPV QGV+VYAAL R AD D R +GQ+MADTLVERVTG AA P+ VN+ + Sbjct 184 LTALLPVKQGVAVYAALKRTADASMDPVRGQGQIMADTLVERVTGVSAAAAVPVGVNITV 243 Query 247 SDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMES 306 SDE LLG + PA + G+G +PAAVAR +++ AV+ + ++ +RRLY GALV ES Sbjct 244 SDEALLGGGDEPATITGHGLVPAAVARRLISEAVSAE-AKVLVRRLYRRCTTGALVKAES 302 Query 307 RARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAK 366 R+RLFPRGLA I+LRDQ CRTPYCDAPIRH DH GGPT+ NG G CERCNY K Sbjct 303 RSRLFPRGLAELIDLRDQTCRTPYCDAPIRHHDHVVGSMRGGPTALDNGQGLCERCNYVK 362 Query 367 QAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPP 401 + GW V+ V HT EF TPTG+ +RS APP Sbjct 363 ETAGWNVA-PVPGADRHTVEFTTPTGTAYRSTAPP 396 >gi|145223484|ref|YP_001134162.1| HNH nuclease [Mycobacterium gilvum PYR-GCK] gi|145215970|gb|ABP45374.1| HNH nuclease [Mycobacterium gilvum PYR-GCK] Length=426 Score = 440 bits (1131), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 249/425 (59%), Positives = 297/425 (70%), Gaps = 8/425 (1%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 MFE +D A +A L + E ERLKS AAA QARA A R AAE AAGVPA+RR Sbjct 1 MFE----VDEGASQAELRAVVEECERLKSRAAAAQARATVLWAAQRAAAERAAGVPASRR 56 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 G+GLASE+ALARR++P +G++HLGFAKAL+ EMPHTLAAL+ G LSEWRATLIVRESACL Sbjct 57 GKGLASEVALARREAPVKGNQHLGFAKALMQEMPHTLAALEGGVLSEWRATLIVRESACL 116 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 V RR LDAELCGDP + G G+ RV A A+ IA RLD AVV+R A DR V+ RP Sbjct 117 SVEHRRQLDAELCGDPSRVAGWGNKRVEAEAKRIAARLDVAAVVERNDRAVKDRCVSTRP 176 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI 240 AP M Y+T L+P+AQG+ +YAAL R + DGRS GQVM DT ER+TGR AA P P+ Sbjct 177 APHNMVYVTLLMPLAQGIGMYAALRRHGEMTVDGRSLGQVMTDTAFERITGRSAAAPVPV 236 Query 241 AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA 300 +NLVM+D TL G + P L GYGP+PA R +V AV D +A LRRLY HP++G Sbjct 237 ELNLVMADTTLAGDDDCPGWLDGYGPVPAGFCRGLVGDAVADAEPKAALRRLYRHPRSGQ 296 Query 301 LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE 360 LV+MES AR+FP+GLA I+ RDQ CRTPYCDAPIRH DHA P GG TSA NGLG C Sbjct 297 LVAMESSARVFPKGLATLIDRRDQTCRTPYCDAPIRHHDHAVPDRAGGQTSADNGLGACA 356 Query 361 RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAP--PHLPAV-TVSELEVRIGI 417 CNYAK+APGW+V T+ E+ HTA ++TPTG+ H S AP P P +S E R+ I Sbjct 357 GCNYAKEAPGWKV-TAGGEDGVHTARWVTPTGAVHYSIAPTLPGPPVYRRISSTESRLSI 415 Query 418 ALARY 422 L + Sbjct 416 DLITF 420 >gi|119963190|ref|YP_946206.1| hypothetical protein AAur_0393 [Arthrobacter aurescens TC1] gi|119950049|gb|ABM08960.1| conserved hypothetical protein [Arthrobacter aurescens TC1] Length=481 Score = 399 bits (1026), Expect = 4e-109, Method: Compositional matrix adjust. Identities = 222/407 (55%), Positives = 278/407 (69%), Gaps = 20/407 (4%) Query 12 AEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRGLASEIALA 71 A+ +ALI+ + +LE LKSA +A QAR A A D A+RA + AGVPAA RG G+A+++ALA Sbjct 67 ADSSALIDELRDLEDLKSAISARQARVAVAFDLAQRAEQAQAGVPAAERGMGVAAQVALA 126 Query 72 RRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAE 131 RR+SP +GSR GFAKALV EMP T+AAL+ G L+EWRATL+V+E+ACL V DR A+D E Sbjct 127 RRESPNKGSRLFGFAKALVTEMPRTMAALESGQLNEWRATLLVKETACLSVEDRAAVDEE 186 Query 132 LCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTAL 191 L D G +G GD ++AAA+A AYR DP++V RA+ A +RTV++RPAPDTMTYLTAL Sbjct 187 LAPDAGTFDGTGDKAIIAAAKAAAYRRDPRSVAQRASRAATERTVSLRPAPDTMTYLTAL 246 Query 192 LPVAQGVSVYAALTRAAD---TRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSD 248 LPVAQGV+VYAALTR AD + D R+RGQVMADTL ERVTG + V I +NLVM+D Sbjct 247 LPVAQGVAVYAALTRTADSVRSSGDARTRGQVMADTLTERVTGTSSGV-AGINLNLVMTD 305 Query 249 ETLLGAANTPAQLCGYGPIPAAVARTMVA---SAVTDQ---------RS--RATLRRLYA 294 TL PA+L GYG +PA AR ++ S DQ RS R LRRLY Sbjct 306 RTLFQGDPEPARLEGYGIVPAEWARALLVEEQSGYEDQLHWNLESADRSELRVLLRRLYT 365 Query 295 HPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHN 354 P++G L++M+S+AR FP+ L FI +RD CRTPYCDAPIRH DH PW G T +N Sbjct 366 APRSGELLTMDSKARFFPQKLRRFIHIRDNTCRTPYCDAPIRHIDHVIPWHSEGSTHLNN 425 Query 355 GLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPP 401 G G C CN+ K+ PGW + + HT TPTG ++S APP Sbjct 426 GAGLCGACNHTKENPGWTAKSMPGD--VHTIRVSTPTGHSYKSKAPP 470 >gi|226361477|ref|YP_002779255.1| hypothetical protein ROP_20630 [Rhodococcus opacus B4] gi|226239962|dbj|BAH50310.1| hypothetical protein [Rhodococcus opacus B4] Length=447 Score = 390 bits (1002), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 221/412 (54%), Positives = 272/412 (67%), Gaps = 11/412 (2%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 L +D D ++A I+ + LE +K+A A QAR A +DA+ RA+ VP ++R Sbjct 9 FLAELPKLDRDIDDATRIDVLRALEEVKAACAGVQARVTADLDASIRASRADRDVPVSQR 68 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRG+A+++ALARRDSP RG RHLG A AL +EMPHTLA L+ G LSEWRAT++VRE+ACL Sbjct 69 GRGIANQVALARRDSPFRGGRHLGMATALAHEMPHTLALLERGLLSEWRATILVRETACL 128 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 DR ALD LCGDP L+G+GD V A RA A +D +AVV RA A +DR VT RP Sbjct 129 TREDRTALDYLLCGDPATLDGLGDQAVCAKVRAAAAEVDAEAVVRRARKAVSDRRVTSRP 188 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRC---DGRSRGQVMADTLVERVTG-RDAAV 236 APDTM Y++ALLPVA+GV+V+A L R AD+ D R+R Q+MAD LV RVTG A Sbjct 189 APDTMAYVSALLPVAEGVAVHATLARDADSILAAGDDRTRSQIMADLLVSRVTGTHHTAT 248 Query 237 PTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTD-------QRSRATL 289 PI VNLV+SD LL + PA + GYGP+PA +AR +A AV D +R L Sbjct 249 TPPITVNLVISDRALLDGGSEPAHVQGYGPVPADLARHWIAEAVQDAIDPNTGNATRVNL 308 Query 290 RRLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGP 349 RRLYA+P +GAL + ES+AR FP GLA I+LRD+ CRTP+CDAPIRH DH GGP Sbjct 309 RRLYANPASGALTATESQARCFPAGLARLIDLRDRTCRTPWCDAPIRHHDHIQSREFGGP 368 Query 350 TSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPP 401 T+AHNG G C CNYAKQ GW + H E TPTG R+RS APP Sbjct 369 TTAHNGAGLCAACNYAKQGAGWNATPRQRSGGLHHIEIYTPTGHRYRSTAPP 420 >gi|343924565|ref|ZP_08764113.1| hypothetical protein GOALK_017_00230 [Gordonia alkanivorans NBRC 16433] gi|343765500|dbj|GAA11039.1| hypothetical protein GOALK_017_00230 [Gordonia alkanivorans NBRC 16433] Length=419 Score = 384 bits (987), Expect = 1e-104, Method: Compositional matrix adjust. Identities = 208/392 (54%), Positives = 268/392 (69%), Gaps = 4/392 (1%) Query 13 EEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRGLASEIALAR 72 +EA + R+ LE +KSA A Q R A +D R E A VP RRGRGLA+E+ LAR Sbjct 6 DEAESVRRLTLLEEIKSACTAVQVRETANLDRLRADDEAARNVPQKRRGRGLAAEVGLAR 65 Query 73 RDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAEL 132 + SP +GS++LGFA+AL +EMPHT+AAL G L+EWRAT++VRE+A L R +D + Sbjct 66 KVSPKKGSQYLGFARALAHEMPHTMAALTDGVLTEWRATILVRETAFLTRESREEIDRRV 125 Query 133 CGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALL 192 CGD +L G+ D + + A+ AY L+P AVV R A AE DR V++RPAPD MT L+ALL Sbjct 126 CGDRAELVGVSDREIESTAKRHAYELEPAAVVARKAKAEKDRRVSVRPAPDLMTQLSALL 185 Query 193 PVAQGVSVYAALTRAADTRC--DGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDET 250 P+ QG+SVYA+L + AD+ D R+ Q+MADTLVERVTGR AA P P++V+++MSDE Sbjct 186 PMTQGISVYASLKKHADSILGADDRTHAQIMADTLVERVTGRSAAEPVPVSVDMIMSDEC 245 Query 251 LLGAANTPAQLCGYGPIPAAVARTMVASAVT-DQRSRATLRRLYAHPQAGALVSMESRAR 309 L G ++ A++ GYGPIPAAVAR +VA++V+ D + +T+RR+YA P GALV+MES++R Sbjct 246 LFGLNDSAAEVKGYGPIPAAVARELVAASVSPDGETASTMRRIYARPSDGALVAMESKSR 305 Query 310 LFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAP 369 FP LA F+ LRDQRCRTPYC API DHA P GPTS N G C N AK+A Sbjct 306 TFPAALAHFVRLRDQRCRTPYCGAPIAEIDHAKPHRHDGPTSEANADGICVTHNRAKEAD 365 Query 370 GWRVSTSVDENHTHTAEFITPTGSRHRSGAPP 401 GW S + + ITPTG RHRS APP Sbjct 366 GWGYSVRM-AGDIRVIDVITPTGGRHRSTAPP 396 >gi|111019339|ref|YP_702311.1| hypothetical protein RHA1_ro02347 [Rhodococcus jostii RHA1] gi|110818869|gb|ABG94153.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=573 Score = 384 bits (986), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 219/408 (54%), Positives = 266/408 (66%), Gaps = 11/408 (2%) Query 1 MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR 60 L +D D ++A I+ + LE +K+A A QAR A +DA+ R A VP A R Sbjct 135 FLAELPKLDLDIDDATRIDVLRTLEEVKAACAGVQARVTADLDASIRTARADRQVPVAHR 194 Query 61 GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL 120 GRG+A+++ALARRDSP RG RHLG A ALV+EMP TLA L+ G LSEWRAT++VRE+ACL Sbjct 195 GRGIANQVALARRDSPFRGGRHLGMATALVHEMPRTLALLERGVLSEWRATILVRETACL 254 Query 121 DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP 180 DR ALD LC DP L+G+GD V A RA A +D +A+V RA A +DR VT RP Sbjct 255 TREDRTALDYLLCADPATLDGLGDQAVCAKVRAAAAEVDAEAMVRRARKAVSDRRVTSRP 314 Query 181 APDTMTYLTALLPVAQGVSVYAALTRAADTRC---DGRSRGQVMADTLVERVTGR-DAAV 236 APDTM Y++ALLPVAQGV+V+A LTR AD+ D R+R Q+MAD LV RVTG A Sbjct 315 APDTMAYVSALLPVAQGVAVHATLTRDADSILAAGDERTRSQIMADLLVSRVTGAPHTAT 374 Query 237 PTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAV-------TDQRSRATL 289 PI VNLV+SD LL + PA + GYGP+PAA+A + AV T +R TL Sbjct 375 APPITVNLVISDRALLDRGSEPAYVQGYGPVPAALAGHWIHEAVQATIDPETGNEARVTL 434 Query 290 RRLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGP 349 RRLYA+P +GAL + ES+AR FP GLA I+LRD+ CRTP+CDAPIRH DH P GP Sbjct 435 RRLYANPHSGALTATESQARRFPAGLARMIDLRDRTCRTPWCDAPIRHHDHIQPREYEGP 494 Query 350 TSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRS 397 T+AHNG G C CNYAKQ GW H E TPTG R+RS Sbjct 495 TTAHNGAGLCAACNYAKQGAGWNARPHQLPGGLHKIEICTPTGHRYRS 542 >gi|119962228|ref|YP_946315.1| HNH endonuclease domain-containing protein [Arthrobacter aurescens TC1] gi|119949087|gb|ABM07998.1| putative HNH endonuclease domain protein [Arthrobacter aurescens TC1] Length=398 Score = 380 bits (975), Expect = 3e-103, Method: Compositional matrix adjust. Identities = 216/401 (54%), Positives = 268/401 (67%), Gaps = 23/401 (5%) Query 27 LKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRGLASEIALARRDSPARGSRHLGFA 86 +KSA A QAR A A D A+RA + AGVPA+ RGRG+ +++ALARR+SP RG R LG A Sbjct 1 MKSAITALQARVAVAFDLAQRAEQAEAGVPASERGRGVGAQVALARRESPNRGGRLLGLA 60 Query 87 KALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAELCGDPGDLEGMGDAR 146 KALV EMP TLAAL G L+EWRATL+V+E+ACL DR A+D EL D G +G GD Sbjct 61 KALVTEMPRTLAALQSGYLNEWRATLLVKETACLSAEDRCAVDEELAPDAGTFDGKGDKA 120 Query 147 VVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTR 206 ++AAA+A AYR DP++VV RA+ A +RTV++RPAPDTM+YLTALLPVAQGV+VY ALT+ Sbjct 121 IIAAAKAAAYRRDPRSVVGRASRAAAERTVSLRPAPDTMSYLTALLPVAQGVAVYKALTQ 180 Query 207 AADT-RCDG--------------RSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETL 251 AAD+ R G R RGQ+MADTLVER+TG + + I ++LVM+D TL Sbjct 181 AADSARSSGKAKSFEDVGSGRVVRPRGQIMADTLVERITGTPGGI-SGITIDLVMTDRTL 239 Query 252 LGAANTPAQLCGYGPIPAAVARTMVA--SAVTDQRSRATLRRLYAHPQAGALVSMESRAR 309 + PA+L GYG +PA ART+V + D+ LRRLY P G L++ +S+AR Sbjct 240 FQGDSEPARLQGYGVVPAEWARTVVGEEQSARDREFSVWLRRLYTAPATGDLLATDSKAR 299 Query 310 LFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAP 369 LF L FIE RD CRTPYCDAPIRH DH PW GG T+ NG G CE CN+ K+ P Sbjct 300 LFSGRLRRFIETRDDSCRTPYCDAPIRHIDHVIPWHSGGQTNLGNGAGLCEACNHTKENP 359 Query 370 GWRVSTSVDENHTHTAEFITPTGSRHRSGAPP---HLPAVT 407 GW ST + HT E TPTG ++S APP H P+ T Sbjct 360 GW--STRAVDADVHTLEISTPTGHTYQSKAPPLPGHRPSRT 398 Lambda K H 0.319 0.131 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 862149077424 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40