BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3090
Length=295
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610227|ref|NP_217606.1| hypothetical protein Rv3090 [Mycoba... 603 1e-170
gi|15842662|ref|NP_337699.1| hypothetical protein MT3175 [Mycoba... 601 4e-170
gi|148824282|ref|YP_001289036.1| hypothetical protein TBFG_13107... 600 1e-169
gi|289575801|ref|ZP_06456028.1| conserved hypothetical protein [... 599 1e-169
gi|254552168|ref|ZP_05142615.1| hypothetical protein Mtube_17231... 599 2e-169
gi|183981588|ref|YP_001849879.1| hypothetical protein MMAR_1572 ... 529 2e-148
gi|240168669|ref|ZP_04747328.1| hypothetical protein MkanA1_0511... 527 8e-148
gi|298526562|ref|ZP_07013971.1| conserved hypothetical protein [... 518 3e-145
gi|289444653|ref|ZP_06434397.1| conserved hypothetical protein [... 505 3e-141
gi|118618764|ref|YP_907096.1| hypothetical protein MUL_3461 [Myc... 426 2e-117
gi|289571295|ref|ZP_06451522.1| conserved hypothetical protein [... 414 7e-114
gi|203457379|ref|YP_002224725.1| gp27 [Mycobacterium phage Rizal... 238 9e-61
gi|29566540|ref|NP_818105.1| gp29 [Mycobacterium phage Bxz1] >gi... 238 1e-60
gi|203458906|ref|YP_002224062.1| gp29 [Mycobacterium phage Scott... 237 2e-60
gi|203460551|ref|YP_002224285.1| gp31 [Mycobacterium phage Spud]... 237 2e-60
gi|339754272|gb|AEJ94288.1| gp24 [Mycobacterium phage Alice] >gi... 237 2e-60
gi|339780669|gb|AEK06506.1| gp29 [Mycobacterium phage Sebata] 237 2e-60
gi|343170893|gb|AEL97703.1| gp33 [Mycobacterium phage Dandelion] 236 3e-60
gi|339781692|gb|AEK07522.1| gp78 [Mycobacterium phage Send513] 203 2e-50
gi|288924136|ref|ZP_06418183.1| band 7 protein [Frankia sp. EUN1... 184 2e-44
gi|309812801|ref|ZP_07706539.1| SPFH/Band 7/PHB domain protein [... 184 2e-44
gi|308178652|ref|YP_003918058.1| band 7 family protein [Arthroba... 181 9e-44
gi|337291560|ref|YP_004630581.1| hypothetical protein CULC22_019... 173 2e-41
gi|330466903|ref|YP_004404646.1| band 7 family protein [Verrucos... 99.0 8e-19
gi|328883389|emb|CCA56628.1| hypothetical protein SVEN_3342 [Str... 57.8 2e-06
gi|139437164|ref|ZP_01771324.1| Hypothetical protein COLAER_0030... 53.5 4e-05
gi|46190901|ref|ZP_00120853.2| COG0330: Membrane protease subuni... 49.7 6e-04
gi|291517516|emb|CBK71132.1| SPFH domain, Band 7 family protein ... 49.3 6e-04
gi|297193051|ref|ZP_06910449.1| conserved hypothetical protein [... 47.8 0.002
gi|154488100|ref|ZP_02029217.1| hypothetical protein BIFADO_0167... 47.4 0.002
gi|336450860|ref|ZP_08621306.1| membrane protease subunit, stoma... 47.4 0.003
gi|322368218|ref|ZP_08042787.1| hypothetical protein ZOD2009_020... 45.4 0.009
gi|293412295|ref|ZP_06655018.1| conserved hypothetical protein [... 45.1 0.013
gi|343460553|gb|AEM38989.1| band 7 protein [Pyrolobus fumarii 1A] 44.7 0.016
gi|27228583|ref|NP_758633.1| putative protease [Pseudomonas resi... 43.1 0.057
gi|18138428|ref|NP_542529.1| hypothetical conserved protein COG3... 42.4 0.079
gi|104781777|ref|YP_608275.1| hypothetical protein PSEEN2689 [Ps... 42.4 0.084
gi|313127677|ref|YP_004037947.1| membrane protease subunit, stom... 41.6 0.13
gi|218778574|ref|YP_002429892.1| HflC protein [Desulfatibacillum... 41.6 0.15
gi|295101559|emb|CBK99104.1| Membrane protease subunits, stomati... 41.2 0.19
gi|169237406|ref|YP_001690610.1| hypothetical protein OE5091F [H... 40.8 0.27
gi|344211206|ref|YP_004795526.1| membrane protease subunit, stom... 40.8 0.27
gi|16120147|ref|NP_395735.1| hypothetical protein VNG6208C [Halo... 40.4 0.32
gi|300928128|ref|ZP_07143671.1| SPFH domain / Band 7 family prot... 40.4 0.38
gi|126011087|ref|YP_001039912.1| putative prohibitin [Streptococ... 40.0 0.40
gi|345371853|gb|EGX03822.1| SPFH domain / Band 7 family protein ... 39.7 0.51
gi|24114188|ref|NP_708698.1| putative serine protease [Shigella ... 39.7 0.58
gi|331674418|ref|ZP_08375178.1| putative HflC protein [Escherich... 39.7 0.58
gi|19745477|ref|NP_606613.1| hypothetical protein spyM18_0361 [S... 39.7 0.58
gi|330502089|ref|YP_004378958.1| P-type (transporting) HAD super... 39.7 0.62
>gi|15610227|ref|NP_217606.1| hypothetical protein Rv3090 [Mycobacterium tuberculosis H37Rv]
gi|31794269|ref|NP_856762.1| hypothetical protein Mb3117 [Mycobacterium bovis AF2122/97]
gi|121638975|ref|YP_979199.1| hypothetical protein BCG_3115 [Mycobacterium bovis BCG str. Pasteur
1173P2]
66 more sequence titles
Length=295
Score = 603 bits (1554), Expect = 1e-170, Method: Compositional matrix adjust.
Identities = 295/295 (100%), Positives = 295/295 (100%), Gaps = 0/295 (0%)
Query 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR
Sbjct 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
Query 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST
Sbjct 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
Query 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS
Sbjct 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
Query 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT
Sbjct 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
Query 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR
Sbjct 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
>gi|15842662|ref|NP_337699.1| hypothetical protein MT3175 [Mycobacterium tuberculosis CDC1551]
gi|13882980|gb|AAK47513.1| hypothetical protein MT3175 [Mycobacterium tuberculosis CDC1551]
gi|323718322|gb|EGB27500.1| hypothetical protein TMMG_02222 [Mycobacterium tuberculosis CDC1551A]
Length=295
Score = 601 bits (1549), Expect = 4e-170, Method: Compositional matrix adjust.
Identities = 294/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%)
Query 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR
Sbjct 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
Query 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST
Sbjct 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
Query 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
ALADVSIRWQLKQAAAPELFQQYKTFDNV VNLIERNLSVALNEVFAGFNPLDPRNLDVS
Sbjct 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVHVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
Query 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT
Sbjct 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
Query 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR
Sbjct 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
>gi|148824282|ref|YP_001289036.1| hypothetical protein TBFG_13107 [Mycobacterium tuberculosis F11]
gi|148722809|gb|ABR07434.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis
F11]
Length=295
Score = 600 bits (1546), Expect = 1e-169, Method: Compositional matrix adjust.
Identities = 294/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%)
Query 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR
Sbjct 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
Query 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMD AVQIDKYVKEGNTDQRITVRLGNQST
Sbjct 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDDAVQIDKYVKEGNTDQRITVRLGNQST 120
Query 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS
Sbjct 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
Query 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT
Sbjct 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
Query 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR
Sbjct 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
>gi|289575801|ref|ZP_06456028.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289540232|gb|EFD44810.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=295
Score = 599 bits (1545), Expect = 1e-169, Method: Compositional matrix adjust.
Identities = 294/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%)
Query 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR
Sbjct 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
Query 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST
Sbjct 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
Query 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS
Sbjct 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
Query 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT
Sbjct 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
Query 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSAL TIAVPGR
Sbjct 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALLTIAVPGR 295
>gi|254552168|ref|ZP_05142615.1| hypothetical protein Mtube_17231 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=295
Score = 599 bits (1544), Expect = 2e-169, Method: Compositional matrix adjust.
Identities = 294/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%)
Query 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR
Sbjct 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
Query 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
QFAIMTTFGRPTGVS NNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST
Sbjct 61 QFAIMTTFGRPTGVSPNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
Query 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS
Sbjct 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
Query 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT
Sbjct 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
Query 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR
Sbjct 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
>gi|183981588|ref|YP_001849879.1| hypothetical protein MMAR_1572 [Mycobacterium marinum M]
gi|183174914|gb|ACC40024.1| hypothetical alanine and valine rich protein [Mycobacterium marinum
M]
Length=296
Score = 529 bits (1362), Expect = 2e-148, Method: Compositional matrix adjust.
Identities = 251/293 (86%), Positives = 271/293 (93%), Gaps = 0/293 (0%)
Query 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
MTW+IV + +C+I A VAAL W+ +D R R K VT+ A+ AA +FF +GCFTIVGTR
Sbjct 1 MTWEIVMLTMCLIGAAVAALLWKFAGNDKARLRGKIVTLGALGAAVLFFLMGCFTIVGTR 60
Query 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
Q AI+TTFGRP GVSLNNGFHGKWPWQMTH MDGAVQIDKYVKEGN+DQRITVRLGNQST
Sbjct 61 QIAIVTTFGRPNGVSLNNGFHGKWPWQMTHQMDGAVQIDKYVKEGNSDQRITVRLGNQST 120
Query 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
ALADVSIRWQLKQ+AAPELFQQYKTFDNVRVNLIERNLSVALNEVFA FNPLDP+NLDVS
Sbjct 121 ALADVSIRWQLKQSAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAAFNPLDPQNLDVS 180
Query 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
PLP+LAKRAADI+RQDVGGQVDIFDVNVPTIQYDQ TEDKINQLNQQRAQTSIA+EAQRT
Sbjct 181 PLPNLAKRAADIMRQDVGGQVDIFDVNVPTIQYDQGTEDKINQLNQQRAQTSIAVEAQRT 240
Query 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVP 293
AEAQAKANEILSRSIS+DPNVVVQNCITAAINKGISPLGCWPGSSALPT++VP
Sbjct 241 AEAQAKANEILSRSISNDPNVVVQNCITAAINKGISPLGCWPGSSALPTVSVP 293
>gi|240168669|ref|ZP_04747328.1| hypothetical protein MkanA1_05110 [Mycobacterium kansasii ATCC
12478]
Length=295
Score = 527 bits (1358), Expect = 8e-148, Method: Compositional matrix adjust.
Identities = 254/295 (87%), Positives = 268/295 (91%), Gaps = 0/295 (0%)
Query 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
MTWQIV + +IVAGVAAL W D R+RAK+VTI A+AA+ +FF LGCFTIVGTR
Sbjct 1 MTWQIVLFTMGLIVAGVAALLWVFAGADKARARAKSVTIGALAASVLFFLLGCFTIVGTR 60
Query 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
Q AI+T FGRP GVSLNNGFHGKWPWQMTH MDGAVQIDKYVKEGN DQRI VRLGNQST
Sbjct 61 QIAIVTAFGRPNGVSLNNGFHGKWPWQMTHQMDGAVQIDKYVKEGNNDQRIMVRLGNQST 120
Query 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
ALADVSIRWQLKQ AAPELFQQYKTFDNVRVNLIERNLSVALNEVFA FNPLDP+NLDVS
Sbjct 121 ALADVSIRWQLKQPAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAAFNPLDPQNLDVS 180
Query 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRT 240
PLP LAKRAADI+RQDV GQVDIFDVNVPTIQYDQ TEDKINQLNQQRAQTSIA+EAQRT
Sbjct 181 PLPKLAKRAADIMRQDVSGQVDIFDVNVPTIQYDQGTEDKINQLNQQRAQTSIAVEAQRT 240
Query 241 AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
AEAQAKANEILSRSIS+DPNVVVQNCITAAINKGISPLGCWPGSSALPT++VPG
Sbjct 241 AEAQAKANEILSRSISNDPNVVVQNCITAAINKGISPLGCWPGSSALPTVSVPGH 295
>gi|298526562|ref|ZP_07013971.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496356|gb|EFI31650.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=295
Score = 518 bits (1335), Expect = 3e-145, Method: Compositional matrix adjust.
Identities = 285/297 (96%), Positives = 285/297 (96%), Gaps = 4/297 (1%)
Query 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR
Sbjct 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
Query 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST
Sbjct 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
Query 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFN R
Sbjct 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNRWT-RETSTC 179
Query 181 P--LPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQ 238
P LP LAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQ
Sbjct 180 PRCLP-LAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQ 238
Query 239 RTAEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
RTAEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR
Sbjct 239 RTAEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVPGR 295
>gi|289444653|ref|ZP_06434397.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289417572|gb|EFD14812.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=253
Score = 505 bits (1301), Expect = 3e-141, Method: Compositional matrix adjust.
Identities = 245/246 (99%), Positives = 245/246 (99%), Gaps = 0/246 (0%)
Query 50 FLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQ 109
LGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQ
Sbjct 8 LLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQ 67
Query 110 RITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGF 169
RITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGF
Sbjct 68 RITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGF 127
Query 170 NPLDPRNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRA 229
NPLDPRNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRA
Sbjct 128 NPLDPRNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRA 187
Query 230 QTSIALEAQRTAEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPT 289
QTSIALEAQRTAEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPT
Sbjct 188 QTSIALEAQRTAEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPT 247
Query 290 IAVPGR 295
IAVPGR
Sbjct 248 IAVPGR 253
>gi|118618764|ref|YP_907096.1| hypothetical protein MUL_3461 [Mycobacterium ulcerans Agy99]
gi|118570874|gb|ABL05625.1| hypothetical alanine and valine rich protein [Mycobacterium ulcerans
Agy99]
Length=225
Score = 426 bits (1095), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 208/225 (93%), Positives = 218/225 (97%), Gaps = 3/225 (1%)
Query 74 VSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQ 133
+SLNNGFHGKWPWQMTH MDGA QIDKYVKEGN+DQRITVRLGNQSTALADVSIRWQLKQ
Sbjct 1 MSLNNGFHGKWPWQMTHQMDGAAQIDKYVKEGNSDQRITVRLGNQSTALADVSIRWQLKQ 60
Query 134 AAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVSPLPSLAKRAADIL 193
+AAPELFQQYKTFDNVRVNLIERNLSVALNEVFA FNPLDP+NLDVSPLP+LAKRAADI+
Sbjct 61 SAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAAFNPLDPQNLDVSPLPNLAKRAADIM 120
Query 194 RQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRTAEAQ--AKANEIL 251
RQDVGGQVDIFDVNVPTIQYDQ TEDKINQLNQQRAQTSIA+EAQRTAEAQ AKANEIL
Sbjct 121 RQDVGGQVDIFDVNVPTIQYDQGTEDKINQLNQQRAQTSIAVEAQRTAEAQAKAKANEIL 180
Query 252 SRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAV-PGR 295
SRSIS+DPNVVVQNCITAAINKGISPLGCWPGSSALPT++V PGR
Sbjct 181 SRSISNDPNVVVQNCITAAINKGISPLGCWPGSSALPTVSVPPGR 225
>gi|289571295|ref|ZP_06451522.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289545049|gb|EFD48697.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=293
Score = 414 bits (1065), Expect = 7e-114, Method: Compositional matrix adjust.
Identities = 223/229 (98%), Positives = 224/229 (98%), Gaps = 0/229 (0%)
Query 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR
Sbjct 64 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 123
Query 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST
Sbjct 124 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 183
Query 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS
Sbjct 184 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 243
Query 181 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRA 229
PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKI + RA
Sbjct 244 PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKITSSSAARA 292
>gi|203457379|ref|YP_002224725.1| gp27 [Mycobacterium phage Rizal]
gi|197311907|gb|ACH62264.1| gp27 [Mycobacterium phage Rizal]
gi|339781005|gb|AEK06840.1| gp29 [Mycobacterium phage Drazdys]
Length=314
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 123/270 (46%), Positives = 168/270 (63%), Gaps = 23/270 (8%)
Query 43 AAAAVFF----FLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQI 98
A A V F F FT+V TR ++TTFGRP G +L+NG H WPWQ +DGA+QI
Sbjct 40 AGALVLFLIVAFFATFTVVSTRNIGVVTTFGRPVG-TLSNGPHFVWPWQSVEELDGAIQI 98
Query 99 DKYVKEG----NTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLI 154
D + N D I VRL N S A AD S+ W++KQ A ELF QYKTFDN+R NL+
Sbjct 99 DWHKDNDPNGDNHDGAIVVRLANNSNAWADTSVSWEMKQDKADELFLQYKTFDNIRTNLV 158
Query 155 ERNLSVALNEVFAGFNPLDPRNLDVSP--------------LPSLAKRAADILRQDVGGQ 200
RNL A+NEVFA +NPL + +P LP+LA R DI++ VG
Sbjct 159 TRNLQTAMNEVFATYNPLGQIKTEQTPEGPKTTVVPVTESQLPTLATRVRDIMQSKVGDY 218
Query 201 VDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPN 260
V I +V +PTI +D +T+ +I++LNQQ+A T++A+E Q TA A+++AN ++ SI+ DPN
Sbjct 219 VSIKEVQIPTIAFDGNTQQRIDELNQQKAATAVAIEKQATASAESQANAEIAASINKDPN 278
Query 261 VVVQNCITAAINKGISPLGCWPGSSALPTI 290
V+V C+ KG + LGCWPG++ +PT+
Sbjct 279 VLVNKCLDIVREKGGNVLGCWPGTNVVPTV 308
>gi|29566540|ref|NP_818105.1| gp29 [Mycobacterium phage Bxz1]
gi|109393243|ref|YP_656040.1| gp27 [Mycobacterium phage Catera]
gi|29425265|gb|AAN16689.1| gp29 [Mycobacterium phage Bxz1]
gi|91981065|gb|ABE67780.1| gp27 [Mycobacterium phage Catera]
gi|339754879|gb|AEJ94891.1| gp29 [Mycobacterium phage Ghost]
Length=314
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/270 (46%), Positives = 168/270 (63%), Gaps = 23/270 (8%)
Query 43 AAAAVFF----FLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQI 98
A A V F F FT+V TR ++TTFGRP G +L+NG H WPWQ +DGA+QI
Sbjct 40 AGALVLFLIVGFFATFTVVSTRNIGVVTTFGRPVG-TLSNGPHFVWPWQSVEELDGAIQI 98
Query 99 DKYVKEG----NTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLI 154
D + N D I VRL N S A AD S+ W++KQ A ELF QYKTFDN+R NL+
Sbjct 99 DWHKDNDPNGDNHDGAIVVRLANNSNAWADTSVSWEMKQDKADELFLQYKTFDNIRTNLV 158
Query 155 ERNLSVALNEVFAGFNPLDPRNLDVSP--------------LPSLAKRAADILRQDVGGQ 200
RNL A+NEVFA +NPL + +P LP+LA R DI++ VG
Sbjct 159 TRNLQTAMNEVFATYNPLGQIKTEQTPEGPKTTVVPVTESQLPTLATRVRDIMQSKVGDY 218
Query 201 VDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPN 260
V I +V +PTI +D +T+ +I++LNQQ+A T++A+E Q TA A+++AN ++ SI+ DPN
Sbjct 219 VSIKEVQIPTIAFDGNTQQRIDELNQQKAATAVAIEKQATASAESQANAEIAASINKDPN 278
Query 261 VVVQNCITAAINKGISPLGCWPGSSALPTI 290
V+V C+ KG + LGCWPG++ +PT+
Sbjct 279 VLVNKCLDIVREKGGNVLGCWPGTNVVPTV 308
>gi|203458906|ref|YP_002224062.1| gp29 [Mycobacterium phage ScottMcG]
gi|197312353|gb|ACH62708.1| gp29 [Mycobacterium phage ScottMcG]
Length=312
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/270 (46%), Positives = 168/270 (63%), Gaps = 23/270 (8%)
Query 43 AAAAVFF----FLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQI 98
A A V F F FT+V TR ++TTFGRP G +L+NG H WPWQ +DGA+QI
Sbjct 38 AGALVLFLVIGFFATFTVVSTRNIGVVTTFGRPVG-TLSNGPHFVWPWQSVEELDGAIQI 96
Query 99 DKYVKEG----NTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLI 154
D + N D I VRL N S A AD S+ W++KQ A ELF QYKTFDN+R NL+
Sbjct 97 DWHKDNDPNGDNHDGAIVVRLANNSNAWADTSVSWEMKQDKADELFLQYKTFDNIRTNLV 156
Query 155 ERNLSVALNEVFAGFNPLDPRNLDVSP--------------LPSLAKRAADILRQDVGGQ 200
RNL A+NEVFA +NPL + +P LP+LA R DI++ VG
Sbjct 157 TRNLQTAMNEVFATYNPLGQIKTEQTPEGPKTTVVPVTESQLPTLATRVRDIMQSKVGDY 216
Query 201 VDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPN 260
V I +V +PTI +D +T+ +I++LNQQ+A T++A+E Q TA A+++AN ++ SI+ DPN
Sbjct 217 VSIKEVQIPTIAFDGNTQQRIDELNQQKAATAVAIEKQATASAESQANAEIAASINKDPN 276
Query 261 VVVQNCITAAINKGISPLGCWPGSSALPTI 290
V+V C+ KG + LGCWPG++ +PT+
Sbjct 277 VLVNKCLDIVREKGGNVLGCWPGTNVVPTV 306
>gi|203460551|ref|YP_002224285.1| gp31 [Mycobacterium phage Spud]
gi|204305689|ref|YP_002224506.1| gp29 [Mycobacterium phage Cali]
gi|281415971|ref|YP_003347707.1| gp24 [Mycobacterium phage ET08]
gi|197312132|gb|ACH62488.1| gp31 [Mycobacterium phage Spud]
gi|197312662|gb|ACH63015.1| gp29 [Mycobacterium phage Cali]
gi|255927650|gb|ACU41271.1| gp24 [Mycobacterium phage ET08]
gi|255927935|gb|ACU41554.1| gp26 [Mycobacterium phage LRRHood]
Length=314
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/270 (46%), Positives = 168/270 (63%), Gaps = 23/270 (8%)
Query 43 AAAAVFF----FLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQI 98
A A V F F FT+V TR ++TTFGRP G +L+NG H WPWQ +DGA+QI
Sbjct 40 AGALVLFLVIGFFATFTVVSTRNIGVVTTFGRPVG-TLSNGPHFVWPWQSVEELDGAIQI 98
Query 99 DKYVKEG----NTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLI 154
D + N D I VRL N S A AD S+ W++KQ A ELF QYKTFDN+R NL+
Sbjct 99 DWHKDNDPNGDNHDGAIVVRLANNSNAWADTSVSWEMKQDKADELFLQYKTFDNIRTNLV 158
Query 155 ERNLSVALNEVFAGFNPLDPRNLDVSP--------------LPSLAKRAADILRQDVGGQ 200
RNL A+NEVFA +NPL + +P LP+LA R DI++ VG
Sbjct 159 TRNLQTAMNEVFATYNPLGQIKTEQTPEGPKTTVVPVTESQLPTLATRVRDIMQSKVGDY 218
Query 201 VDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPN 260
V I +V +PTI +D +T+ +I++LNQQ+A T++A+E Q TA A+++AN ++ SI+ DPN
Sbjct 219 VSIKEVQIPTIAFDGNTQQRIDELNQQKAATAVAIEKQATASAESQANAEIAASINKDPN 278
Query 261 VVVQNCITAAINKGISPLGCWPGSSALPTI 290
V+V C+ KG + LGCWPG++ +PT+
Sbjct 279 VLVNKCLDIVREKGGNVLGCWPGTNVVPTV 308
>gi|339754272|gb|AEJ94288.1| gp24 [Mycobacterium phage Alice]
gi|343171467|gb|AEL98273.1| gp29 [Mycobacterium phage LinStu]
Length=314
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/270 (46%), Positives = 168/270 (63%), Gaps = 23/270 (8%)
Query 43 AAAAVFF----FLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQI 98
A A V F F FT+V TR ++TTFGRP G +L+NG H WPWQ +DGA+QI
Sbjct 40 AGALVLFLVIGFFATFTVVSTRNIGVVTTFGRPVG-TLSNGPHFVWPWQSVEELDGAIQI 98
Query 99 DKYVKEG----NTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLI 154
D + N D I VRL N S A AD S+ W++KQ A ELF QYKTFDN+R NL+
Sbjct 99 DWHKDNDPNGDNHDGAIVVRLANNSNAWADTSVSWEMKQDKADELFLQYKTFDNIRTNLV 158
Query 155 ERNLSVALNEVFAGFNPLDPRNLDVSP--------------LPSLAKRAADILRQDVGGQ 200
RNL A+NEVFA +NPL + +P LP+LA R DI++ VG
Sbjct 159 TRNLQTAMNEVFATYNPLGQIKTEQTPEGPKTTVVPVTESQLPTLATRVRDIMQSKVGDY 218
Query 201 VDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPN 260
V I +V +PTI +D +T+ +I++LNQQ+A T++A+E Q TA A+++AN ++ SI+ DPN
Sbjct 219 VSIKEVQIPTIAFDGNTQQRIDELNQQKAATAVAIEKQATASAESQANAEIAASINKDPN 278
Query 261 VVVQNCITAAINKGISPLGCWPGSSALPTI 290
V+V C+ KG + LGCWPG++ +PT+
Sbjct 279 VLVNKCLDIVREKGGNVLGCWPGTNVVPTV 308
>gi|339780669|gb|AEK06506.1| gp29 [Mycobacterium phage Sebata]
Length=312
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/270 (46%), Positives = 168/270 (63%), Gaps = 23/270 (8%)
Query 43 AAAAVFF----FLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQI 98
A A V F F FT+V TR ++TTFGRP G +L+NG H WPWQ +DGA+QI
Sbjct 38 AGALVLFLVIGFFATFTVVSTRNIGVVTTFGRPVG-TLSNGPHFVWPWQSVEELDGAIQI 96
Query 99 DKYVKEG----NTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLI 154
D + N D I VRL N S A AD S+ W++KQ A ELF QYKTFDN+R NL+
Sbjct 97 DWHKDNDPNGDNHDGAIVVRLANNSNAWADTSVSWEMKQDKADELFLQYKTFDNIRTNLV 156
Query 155 ERNLSVALNEVFAGFNPLDPRNLDVSP--------------LPSLAKRAADILRQDVGGQ 200
RNL A+NEVFA +NPL + +P LP+LA R DI++ VG
Sbjct 157 TRNLQTAMNEVFATYNPLGQIKTEQTPEGPKTTVVPVTESQLPTLATRVRDIMQSKVGDY 216
Query 201 VDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPN 260
V I +V +PTI +D +T+ +I++LNQQ+A T++A+E Q TA A+++AN ++ SI+ DPN
Sbjct 217 VSIKEVQIPTIAFDGNTQQRIDELNQQKAATAVAIEKQATASAESQANAEIAASINKDPN 276
Query 261 VVVQNCITAAINKGISPLGCWPGSSALPTI 290
V+V C+ KG + LGCWPG++ +PT+
Sbjct 277 VLVNKCLDIVREKGGNVLGCWPGTNVVPTV 306
>gi|343170893|gb|AEL97703.1| gp33 [Mycobacterium phage Dandelion]
Length=314
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/270 (46%), Positives = 168/270 (63%), Gaps = 23/270 (8%)
Query 43 AAAAVFF----FLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQI 98
A A V F F FT+V TR ++TTFGRP G +L+NG H WPWQ +DGA+QI
Sbjct 40 AGALVLFLIVGFFATFTVVSTRNIGVVTTFGRPVG-TLSNGPHFVWPWQSVEELDGAIQI 98
Query 99 DKYVKEG----NTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLI 154
D + N D I VRL N S A AD S+ W++KQ A ELF QYKTFDN+R NL+
Sbjct 99 DWHKDNDPNGDNHDGAIVVRLANNSNAWADTSVSWEMKQDKADELFLQYKTFDNIRTNLV 158
Query 155 ERNLSVALNEVFAGFNPLDPRNLDVSP--------------LPSLAKRAADILRQDVGGQ 200
RNL A+NEVFA +NPL + +P LP+LA R DI++ VG
Sbjct 159 TRNLQTAMNEVFATYNPLGQIKTEQTPEGPKTTVVPVTESQLPTLATRVRDIMQSKVGDY 218
Query 201 VDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPN 260
V I +V +PTI +D +T+ +I++LNQQ+A T++A+E Q TA A+++AN ++ SI+ DPN
Sbjct 219 VSIKEVQIPTIAFDGNTQQRIDELNQQKAATAVAIEKQATASAESQANAEIAASINKDPN 278
Query 261 VVVQNCITAAINKGISPLGCWPGSSALPTI 290
V+V C+ +G + LGCWPG++ +PT+
Sbjct 279 VLVNKCLDIVRERGGNVLGCWPGTNVVPTV 308
>gi|339781692|gb|AEK07522.1| gp78 [Mycobacterium phage Send513]
Length=320
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/317 (42%), Positives = 175/317 (56%), Gaps = 30/317 (9%)
Query 2 TWQIVFVVICVIVAGVAALFWRLPSD-DTTRSRAKTVTIAAVAA-------AAVFFF--- 50
T + FV++ I V LF+ + + + + R + T AA A VF
Sbjct 4 TLWLAFVLLVTIGFAVWFLFFPITKEREVSYGRYEKRTFRNPAALIGLGTSALVFLISLV 63
Query 51 LGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQR 110
L C TIVGTRQ I+T + RPTG +L+NG H PW H MD A+Q D Y N D R
Sbjct 64 LACTTIVGTRQVGIVTQWNRPTGETLSNGLHFILPWTSVHEMDAAIQNDVY----NGDHR 119
Query 111 ITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFN 170
I VRLGN STA+ADV++RW++K A ELFQQYKTFDNVR NL+ERNL LNE F F+
Sbjct 120 IQVRLGNNSTAMADVNVRWEIKPDQADELFQQYKTFDNVRSNLVERNLRTVLNEAFMAFD 179
Query 171 PL--DPR------NLDVSPLP---SLAKRAADILR--QDVGGQVDIFDVNVPTIQYDQST 217
PL DP+ P P +L+ AD L Q QV I D++VP I YD +T
Sbjct 180 PLAGDPKPPVGPDGKPTGPAPKPVTLSSVTADALAQLQAKSDQVTILDLSVPVIDYDDNT 239
Query 218 EDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPNVVVQNCITAAINKGISP 277
E KIN +N RA T+ A + +TAE + A E L++ D + + C+ G +
Sbjct 240 EQKINAINAARADTTRAEQEAKTAEQKRLAAEELAKQPIPDLRIAIAACVNKMAETGQT- 298
Query 278 LGCWP-GSSALPTIAVP 293
L C+P G++ +PT+ VP
Sbjct 299 LNCFPLGNNVVPTLQVP 315
>gi|288924136|ref|ZP_06418183.1| band 7 protein [Frankia sp. EUN1f]
gi|288344517|gb|EFC78999.1| band 7 protein [Frankia sp. EUN1f]
Length=314
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/253 (44%), Positives = 153/253 (61%), Gaps = 14/253 (5%)
Query 45 AAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKE 104
A +F L T V T++ I+T+FGRPTG L+NG HGK PWQ P D A+Q D Y E
Sbjct 59 AVLFTVLSSVTSVSTKKVGIVTSFGRPTGTVLSNGLHGKLPWQKVTPFDAAIQTDSYAPE 118
Query 105 GNTDQR----ITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSV 160
+ R I VR +QSTA S RW++ +A +LF Y+ FDNVR +L+ R+L
Sbjct 119 PSGSDREGNEIVVRTASQSTAYVSASARWRINPGSADDLFVDYRGFDNVRASLVTRDLRA 178
Query 161 ALNEVFAGFNPLDPRNLDVSP-LPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTED 219
A+N+VF+ +NPL D P +L+K+ L VG V++ V + + +D++T+D
Sbjct 179 AMNDVFSTYNPLGG---DAVPSYDNLSKQVTKALSARVGAPVEVQSVVISHVAFDKTTQD 235
Query 220 KINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPNVVVQNCIT---AAINKGIS 276
+IN L + AQT IA + + TA A+AKANE LS S+S DPNV+V C+T AA++KG
Sbjct 236 RINALQGEVAQTRIATQREATAAAEAKANETLSASVSQDPNVLVSQCMTLLRAAVDKGQQ 295
Query 277 -PLG--CWPGSSA 286
P G CWPG+ A
Sbjct 296 LPAGFSCWPGAGA 308
>gi|309812801|ref|ZP_07706539.1| SPFH/Band 7/PHB domain protein [Dermacoccus sp. Ellin185]
gi|308433218|gb|EFP57112.1| SPFH/Band 7/PHB domain protein [Dermacoccus sp. Ellin185]
Length=364
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/274 (38%), Positives = 158/274 (58%), Gaps = 12/274 (4%)
Query 20 LFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVG---TRQFAIMTTFGRPTGVSL 76
L P +TR+RA+ + + A A + + T++ ++TTFG+PTG SL
Sbjct 80 LHAARPEAPSTRARARLAYLVSAACATLAVIVLAVASSVVVPTKEIGVVTTFGKPTG-SL 138
Query 77 NNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAAA 136
+NGFH K PWQ MD A+Q D + + + I VR+ +Q+TA D SIRW+++ A+
Sbjct 139 SNGFHLKAPWQKVTYMDAAIQTDSHTADDKS--CINVRIAHQATACVDASIRWRIRPDAS 196
Query 137 PELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVSPLPSLAKRAADI---L 193
LFQ Y+ F ++R +L++R LS +LN+ FA ++ L P+LAK + D +
Sbjct 197 DALFQNYREFSSIRSSLVDRQLSSSLNKEFASYDALAVDEKGNPTTPTLAKLSDDATKDM 256
Query 194 RQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSR 253
R +G Q+++ V +P I+ D +T+ K N L Q AQT IA + +TAE QAKANE L++
Sbjct 257 RDQIGDQIEVLSVIIPVIKLDDNTQSKANALLAQVAQTRIAEQGVKTAEQQAKANEALAK 316
Query 254 SISDDPNVVVQNCITAAINKGIS-PLG--CWPGS 284
S+S DPNV+V C+ ++ P G CWP S
Sbjct 317 SVSKDPNVLVSKCLDMVEGGKVTLPAGFSCWPSS 350
>gi|308178652|ref|YP_003918058.1| band 7 family protein [Arthrobacter arilaitensis Re117]
gi|307746115|emb|CBT77087.1| band 7 family protein [Arthrobacter arilaitensis Re117]
Length=295
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 100/290 (35%), Positives = 161/290 (56%), Gaps = 9/290 (3%)
Query 1 MTWQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTR 60
M IV V+ +I V A + ++ RS + I+ + + + C TIV R
Sbjct 1 MFLTIVAVLCAIIGLIVMAAGKAMKPENKNRSSTRFTGISIFIVSLIVLAIACTTIVQPR 60
Query 61 QFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
+ G+PT V ++NGFH KWPW+ +DG+VQ D Y D I VRLGN
Sbjct 61 TVGVKVALGKPTSV-VSNGFHLKWPWEKVEKLDGSVQNDVYTG----DSAIPVRLGNNGR 115
Query 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
A D SI+WQLK A ++F Y+TF+ ++ NL++RN +LNEV A ++PL+ +
Sbjct 116 ADVDASIQWQLKTDDAMDVFLDYRTFEGIQSNLVDRNFRASLNEVMATYDPLEYGDSASG 175
Query 181 --PLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQ 238
L LAK + ++ V Q++I V +P I +D+ T+++IN+L + A+T +A + +
Sbjct 176 GQDLEGLAKSVQEKMQAKVKTQIEIRSVTLPIINFDEPTQNRINELQAETAKTRVAQQRK 235
Query 239 RTAEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSSALP 288
+T+ A+A+AN+IL RS++++ + C+ G SP+GC+P S P
Sbjct 236 QTSTAEAEANKILERSLTNE--TLTSKCLDIVAESGQSPIGCFPNSGVQP 283
>gi|337291560|ref|YP_004630581.1| hypothetical protein CULC22_01957 [Corynebacterium ulcerans BR-AD22]
gi|334699866|gb|AEG84662.1| putative secreted protein [Corynebacterium ulcerans BR-AD22]
Length=299
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/270 (38%), Positives = 151/270 (56%), Gaps = 22/270 (8%)
Query 37 VTIAAVAAAAVFFFLGCFT----------IVGTRQFAIMTTFGRPTGVSLNNGFHGKWPW 86
V ++ V A F+G FT +V R I FG+P G +LNNG H PW
Sbjct 37 VVVSHVVARLAPIFIGAFTTLILAFFVTTVVPARTVGINIAFGKPVG-TLNNGLHFIAPW 95
Query 87 QMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTF 146
+D AVQ D Y N+D+ I VRL N + A D SI+WQLK A + + Y++F
Sbjct 96 SSVEKLDLAVQNDVY----NSDRAIDVRLANSAKARVDASIQWQLKPEGAEQTYLDYRSF 151
Query 147 DNVRVNLIERNLSVALNEVFAGFNPL----DPRNLDVSPLPSLAKRAADILRQDVGGQVD 202
++++ NL++RN ALNEV ++PL D + D L LAK A +++ VG Q+D
Sbjct 152 ESIQSNLVDRNFRAALNEVLIDYDPLAVVRDGDSTD-QKLAQLAKDTAVKMQEKVGNQID 210
Query 203 IFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPNVV 262
+ V +P + +D +T+ +I++L + A+T IA + + T+ A+A+AN L+ SI +PNV+
Sbjct 211 VRSVTLPIVNFDDATQARIDELQTEFARTRIAEQKKNTSRAEAQANRELTESI--NPNVL 268
Query 263 VQNCITAAINKGISPLGCWPGSSALPTIAV 292
C+ SPLGC+PGS+A P +V
Sbjct 269 TDKCLNIVRETKQSPLGCFPGSTATPVTSV 298
>gi|330466903|ref|YP_004404646.1| band 7 family protein [Verrucosispora maris AB-18-032]
gi|328809874|gb|AEB44046.1| band 7 family protein [Verrucosispora maris AB-18-032]
Length=287
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 111/250 (45%), Gaps = 20/250 (8%)
Query 39 IAAVAAAAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQI 98
++A+ A + V R I+T+FG+PTG +G PWQ D Q
Sbjct 39 VSALVATLLLTVASSAHSVPIRSVGIVTSFGKPTGEVTGSGLKWVAPWQRVGEWDAGRQ- 97
Query 99 DKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYK-TFDNVRVNLIERN 157
KY GN D + VR G + A +V I WQ++ AP+ F YK FD+ R +
Sbjct 98 -KYDHIGN-DACVRVRTGTLADACVEVLIEWQVQPENAPQQFMDYKGDFDSFRGQRVGVQ 155
Query 158 LSVALNEVFAGFNPLDP-------RNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNVPT 210
L A+N+ FA +NPL+ N+D+ P K +A+ +G VDI V +
Sbjct 156 LDSAVNDAFASYNPLERIDAKTGNLNVDLKPFAESIKSSAE---GRLGSDVDILSVTITR 212
Query 211 IQYDQSTEDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPNVVVQNCITAA 270
+ +D+ TE I + AQT + +R AE Q + E ++ V C+ A
Sbjct 213 VNHDEKTEGNIKAFQDKLAQTRNLEQDRRNAEIQKEITETNAKVDK------VTRCLEIA 266
Query 271 INKGISPLGC 280
G SP C
Sbjct 267 EKNGSSPGLC 276
>gi|328883389|emb|CCA56628.1| hypothetical protein SVEN_3342 [Streptomyces venezuelae ATCC
10712]
Length=294
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/302 (23%), Positives = 132/302 (44%), Gaps = 38/302 (12%)
Query 6 VFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTRQFAIM 65
+FV+ ++V L++ ++D+ K + AV A + ++ + +
Sbjct 1 MFVIAILLVIAAVVLYFVGRANDS--KGLKFGALGAVLAGLFSLIVSMTYVISAYEVGVP 58
Query 66 TTFGRPTGVSLNNGFHGKWPWQ-----MTHPMDGAVQIDKYVKEGNTDQRITVRLGNQST 120
FG+ G + +G H K P+ T P+D + DK V E VR
Sbjct 59 VAFGK-VGSPMTSGMHVKSPFTDVTTFSTRPVDLNLS-DKDVVE--------VRSSQGGV 108
Query 121 ALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVS 180
+V+++W + A EL++ + D V+ L+ + + VFA + D
Sbjct 109 MYVEVTVKWAVVPTKAVELYKLAGSEDTVQQRLVYPDSREIVRNVFARYTSEQGYASDRE 168
Query 181 PLPSLAKRAADILRQDVGGQ-VDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQR 239
+ + ++++ + + +D+ VN+ ++ + + +I++ QQ+ T A EA R
Sbjct 169 KINA---EIGTLIKERLAPRGIDVTTVNLRNVKPSDALQGQIDRKIQQQQATERATEAAR 225
Query 240 TAEAQ-----------AKANEILSRSISDDPNVVVQNCI----TAAINKGISPLGCWPGS 284
TA+A+ A+AN+IL+ S++D V++ CI AA + + C GS
Sbjct 226 TAKAEADRRRIEAEGIARANKILNESLTD--KVLMNQCIDAFKEAAAKNAVYAVPCGNGS 283
Query 285 SA 286
SA
Sbjct 284 SA 285
>gi|139437164|ref|ZP_01771324.1| Hypothetical protein COLAER_00303 [Collinsella aerofaciens ATCC
25986]
gi|133776811|gb|EBA40631.1| Hypothetical protein COLAER_00303 [Collinsella aerofaciens ATCC
25986]
Length=323
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/268 (24%), Positives = 114/268 (43%), Gaps = 33/268 (12%)
Query 42 VAAAAVFFFLGCFTIVGTRQFAIMTTFGRP-TGVSLNNGFHGKWPWQ--MTHPM------ 92
V A+ CF T + ++ G G + GFH K PWQ +T+ +
Sbjct 57 VLVGAIIAATACFYTQDTGEVCVIRNLGGSLAGSTSEAGFHAKAPWQDVVTYDVRNNLIN 116
Query 93 ---DGAVQIDKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNV 149
D ++D EG +++++ + ++A D+ + + L AA L+ +Y T ++
Sbjct 117 FYGDTDYEVDGGSYEG---KQVSINDKSGASANIDIQVNYSLNPDAALSLYSEYGTQESF 173
Query 150 RVNLIERNLSVALNEVFAGFNPLDPRNLDVSPLPSLAKRAADILRQDVG---GQVDIFDV 206
I ++ EV GF+ + D S ++A + +G QV + DV
Sbjct 174 VEKYISNDVRAVTREVSGGFDTVTMLT-DRSQFTKAVQKALTEKWKGIGLTVEQVSVQDV 232
Query 207 NVP---TIQYDQSTEDKINQLNQQRAQTSIALEAQRT---AEAQAKANEILSRSISDDPN 260
P T Y ++ ++ + Q Q + +EA+ A+ +A AN +L+ S++D
Sbjct 233 RYPKNITKSYSEAQAAEVAKQKAQNEQETAKVEAETKKIEAQGEADANAVLANSLND--Q 290
Query 261 VVVQNCITAAINKG------ISPLGCWP 282
V+ Q+ I A + G + P G P
Sbjct 291 VLQQHYIDALKSIGKDGNLVVVPEGSQP 318
>gi|46190901|ref|ZP_00120853.2| COG0330: Membrane protease subunits, stomatin/prohibitin homologs
[Bifidobacterium longum DJO10A]
gi|189440044|ref|YP_001955125.1| membrane protease [Bifidobacterium longum DJO10A]
gi|189428479|gb|ACD98627.1| Membrane protease [Bifidobacterium longum DJO10A]
Length=299
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/241 (25%), Positives = 99/241 (42%), Gaps = 27/241 (11%)
Query 53 CFTIVGTRQFAIMTTFGRP-TGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGN----- 106
C V + A++ G G S + GFH K PWQ D + + K+ +
Sbjct 47 CLYSVDVGEVAVIRNMGGSLAGHSEDAGFHWKTPWQSVIKYDTRNNLINFYKDTDYKYDG 106
Query 107 ---TDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALN 163
+++TV + ++A DV + + L +AA L+ +Y N I +L
Sbjct 107 GSAVGKQVTVNDRSGASADIDVQVNYSLDPSAAEYLYSEYGKQQTFTQNYISNDLRSVAR 166
Query 164 EVFAGFNPLDPRNLDVSPLPSLAKRAADILR---QDVG---GQVDIFDVNVPTIQYDQST 217
E F+ L ++ K D L + +G QV + DV + T
Sbjct 167 EQSGRFDTLTM----LTNRGEYTKAVQDALAAKWRKIGLTVEQVSVQDVRYGEAITKKYT 222
Query 218 E------DKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPNVVVQNCITAAI 271
E DK LN+Q+ + A + A+ +A AN +L+ S++D NV+ Q+ I A
Sbjct 223 EAQAAEIDKQKALNEQQVAKTEAETKKIKAQGEADANAVLNESLTD--NVLKQHYIDALS 280
Query 272 N 272
N
Sbjct 281 N 281
>gi|291517516|emb|CBK71132.1| SPFH domain, Band 7 family protein [Bifidobacterium longum subsp.
longum F8]
Length=299
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/241 (25%), Positives = 99/241 (42%), Gaps = 27/241 (11%)
Query 53 CFTIVGTRQFAIMTTFGRP-TGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGN----- 106
C V + A++ G G S + GFH K PWQ D + + K+ +
Sbjct 47 CLYSVDVGEVAVIRNMGGSLAGHSEDAGFHLKTPWQSVIKYDTRNNLINFYKDTDYKYDG 106
Query 107 ---TDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALN 163
+++TV + ++A DV + + L +AA L+ +Y N I +L
Sbjct 107 GSAVGKQVTVNDRSGASADIDVQVNYSLDPSAAEYLYSEYGKQQTFTQNYISNDLRSVAR 166
Query 164 EVFAGFNPLDPRNLDVSPLPSLAKRAADILR---QDVG---GQVDIFDVNVPTIQYDQST 217
E F+ L ++ K D L + +G QV + DV + T
Sbjct 167 EQSGRFDTLTM----LTNRGEYTKAVQDALAAKWKKIGLTVEQVSVQDVRYGEAITKKYT 222
Query 218 E------DKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPNVVVQNCITAAI 271
E DK LN+Q+ + A + A+ +A AN +L+ S++D NV+ Q+ I A
Sbjct 223 EAQAAEIDKQKALNEQQVAKTEAETKKIKAQGEADANAVLNESLTD--NVLKQHYIDALS 280
Query 272 N 272
N
Sbjct 281 N 281
>gi|297193051|ref|ZP_06910449.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197719818|gb|EDY63726.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=294
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/284 (24%), Positives = 123/284 (44%), Gaps = 40/284 (14%)
Query 6 VFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLG---CFTIVGTRQF 62
+FV+ ++V A ++ D K + + AV A F G C I+ +
Sbjct 1 MFVLFVILVIAAAVMYLVARGGDN-----KGLKLGAVGALIAGLFAGMASCVHIISAYEV 55
Query 63 AIMTTFGRPTGVSLNNGFHGKWPWQ-----MTHPMDGAVQIDKYVKEGNTDQRITVRLGN 117
+ TFG+ G +N+G + P+ T P+D + DK V E VR
Sbjct 56 GVPVTFGK-VGSPMNSGMNITSPFTNVTTFSTRPVDLNLS-DKDVVE--------VRSSQ 105
Query 118 QSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNL 177
+V+++W + A A EL++ + D ++ L+ + + VFA +
Sbjct 106 GGVMYVEVTVKWAVTPAKAVELYRLAGSEDAIQQRLVFPDSREIIRNVFARHTSEEGYT- 164
Query 178 DVSPLPSLAKRAADILRQDVGGQ-VDIFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALE 236
S + D++++ + + + + VN+ ++ + +++I++ QQ+ T A E
Sbjct 165 --SAREKINAEIGDLIKERLAPRGIAVTTVNLRNVRPSEQLQEQIDRKIQQQQATERATE 222
Query 237 AQRT-----------AEAQAKANEILSRSISDDPNVVVQNCITA 269
A RT AE AKAN+IL+ S+SD V+ CI A
Sbjct 223 AARTATAEAERRRIEAEGIAKANKILNDSLSD--RVLANQCIEA 264
>gi|154488100|ref|ZP_02029217.1| hypothetical protein BIFADO_01671 [Bifidobacterium adolescentis
L2-32]
gi|154083573|gb|EDN82618.1| hypothetical protein BIFADO_01671 [Bifidobacterium adolescentis
L2-32]
Length=299
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/241 (25%), Positives = 99/241 (42%), Gaps = 27/241 (11%)
Query 53 CFTIVGTRQFAIMTTFGRP-TGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGN----- 106
C V + A++ G G S + GFH K PWQ D + + K+ +
Sbjct 47 CLYSVDVGEVAVIRNMGGSLAGHSEDAGFHLKTPWQSVIKYDTRNNLINFYKDTDYKYDG 106
Query 107 ---TDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALN 163
+++TV + ++A DV + + L +AA L+ +Y N I +L
Sbjct 107 GSAVGKQVTVNDRSGASADIDVQVNYSLDPSAAEYLYSEYGKQQTFTQNYISNDLRSVAR 166
Query 164 EVFAGFNPLDPRNLDVSPLPSLAKRAADILR---QDVG---GQVDIFDVN-----VPTIQ 212
E F+ L ++ K D L + +G QV + DV V
Sbjct 167 EQSGRFDTLTM----LTNRGEYTKAVQDALAAKWRKIGLTVEQVSVQDVRYGDEIVKKYN 222
Query 213 YDQSTE-DKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRSISDDPNVVVQNCITAAI 271
Q+ E DK +N+Q + A + A+ +A AN +L+ S++D NV+ Q+ I A
Sbjct 223 EAQAAEIDKQKAMNEQEVAKTEAETKKIKAQGEADANAVLNESLTD--NVLKQHYIDALS 280
Query 272 N 272
N
Sbjct 281 N 281
>gi|336450860|ref|ZP_08621306.1| membrane protease subunit, stomatin/prohibitin [Idiomarina sp.
A28L]
gi|336282116|gb|EGN75354.1| membrane protease subunit, stomatin/prohibitin [Idiomarina sp.
A28L]
Length=288
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/291 (25%), Positives = 117/291 (41%), Gaps = 53/291 (18%)
Query 39 IAAVAAAAVFFFL-----GCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPW-QMTHPM 92
+AA+ + V F+ G F V + ++ +G VS G H K P +
Sbjct 7 VAALGSVVVGIFILLLAVGSFYTVDEGERGVVVRYGSVVSVS-EPGLHFKIPLVDAVRKI 65
Query 93 DGAVQIDKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVN 152
Q++ Y QR+ +Q AL ++S+R+Q+ + E+++ + T R
Sbjct 66 STQEQVEMY-------QRMEAYSNDQQPALMNISVRYQIDNSRVDEVYRNFGT----RQA 114
Query 153 LIERNLS-VALNE---VFAGFNPLDPRNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNV 208
LI+R ++ + L E V FN + L A ++Q V G V I V V
Sbjct 115 LIDRQVTRIVLEEAKTVLGQFNAA----TSIRERGRLNAEMATAVQQSVTGPVIILGVQV 170
Query 209 PTIQYDQSTEDKINQ--------------LNQQRAQTSI-----ALEAQRT-AEAQAKAN 248
+ + + E+ + Q L ++R + I A EA R A+AQA+A+
Sbjct 171 EDVSFSAAYEESVEQRMLAEVAVERERQNLERERVEADIVRTRAAGEADRVRAQAQAEAD 230
Query 249 EILSR------SISDDPNVVVQNCITAAINKGISPLGCWPGSSALPTIAVP 293
I R +I D + N + + K G P ++ LP VP
Sbjct 231 GIRLRGSAEAEAIRDRAAALADNPLLVELVKAEKWDGKLP-TTMLPNSTVP 280
>gi|322368218|ref|ZP_08042787.1| hypothetical protein ZOD2009_02010 [Haladaptatus paucihalophilus
DX253]
gi|320552234|gb|EFW93879.1| hypothetical protein ZOD2009_02010 [Haladaptatus paucihalophilus
DX253]
Length=324
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/248 (27%), Positives = 102/248 (42%), Gaps = 36/248 (14%)
Query 45 AAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQM------THPMDGAVQI 98
A V FL +T V ++ +G TG G H P T P + +
Sbjct 43 APVIGFL-SWTPVDEGNVQVVKKWGAATGTVFEPGAHFINPVSQDTVSLSTRPQ--SYTM 99
Query 99 DKYVKEGN---TDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIE 155
EGN TD ITV + D+++R+++ A + ++ Y+T + LI
Sbjct 100 SSQQGEGNKAGTDDSITVLTEDGLRVDIDITVRYRVDAGQAVKFYKNYRTLGSAEQRLIR 159
Query 156 RNLSVAL---------NEVFAGFNPLDPRNLDVSPLPSLAKRAADILRQDVGGQVDIFDV 206
++ L E++ G + + S L R A IL V I V
Sbjct 160 PSIRSVLRTEAGALPVTEIYTGKGQTELKQAAQSALKKDFARDALILE-----AVQIRKV 214
Query 207 NVPTIQYDQSTEDK-INQLNQQRAQTSIA---LEAQRT---AEAQAKANEILSRSISDDP 259
N+P QY+Q+ E K I + +Q+ + + LEA R A +A+AN ILS S+ D
Sbjct 215 NLPK-QYEQAVEQKEITKQRRQQKENELEVEKLEADRKKIEANGEAEANRILSESL--DQ 271
Query 260 NVVVQNCI 267
V+ Q I
Sbjct 272 KVLTQQYI 279
>gi|293412295|ref|ZP_06655018.1| conserved hypothetical protein [Escherichia coli B354]
gi|291469066|gb|EFF11557.1| conserved hypothetical protein [Escherichia coli B354]
Length=281
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/281 (24%), Positives = 116/281 (42%), Gaps = 32/281 (11%)
Query 20 LFWRLPSDDTTRSRAKTVTIA-AVAAAAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNN 78
+ + P T+ K++ I V A V FL +T V + I+ +G+ V+
Sbjct 11 IHMKAPVSITSFRPQKSIAIVIGVLAVVVLPFLSYYT-VNEGERGILLRYGKIVKVA-EP 68
Query 79 GFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAAAPE 138
G K P+ M+ +I + Q + +Q A VS+ + +K + A
Sbjct 69 GLGFKIPF-----MESVEKISTR-NQAVVYQGLQAYSRDQQPAQMTVSVSFHIKPSEAGA 122
Query 139 LFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLDPRNLDVSPLPSLAKRAADILRQDVG 198
++ Y T ++++ LI R L L VF + + V L + + +R+ V
Sbjct 123 VYTTYNTIESLKERLIVRQLPTQLENVFGQYTAISA----VQDRTKLVQDLQNAMRKAVV 178
Query 199 GQVDIFDVNVPTIQ----YDQSTEDKIN----------QLNQQRAQTSIALEAQRTAEAQ 244
G V I V + I Y++S ED++ L ++ Q IA+ A+A+
Sbjct 179 GPVVIDGVQIENIDFSDAYEKSIEDRMKAEVAIATRKQNLETEKIQAQIAVT---QAQAE 235
Query 245 AKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPGSS 285
A+A + ++ ++P +V TA G P PGS+
Sbjct 236 AEAIRLRGEALRNNPGLVA--LTTAERWDGKLPDTMIPGST 274
>gi|343460553|gb|AEM38989.1| band 7 protein [Pyrolobus fumarii 1A]
Length=352
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/238 (26%), Positives = 99/238 (42%), Gaps = 42/238 (17%)
Query 35 KTVTIAAVAAAAVFFFLGCFTI----VGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTH 90
+ +T+ A A VF + + VG I GR GV F K PWQ
Sbjct 11 RLLTVLAAIIAIVFVAMVAMSTYQLDVGEAAVIIDPVQGRIVGVVFGPHFGFKMPWQEIR 70
Query 91 PMDGAVQIDKYVKEGNTDQRITVRLGNQSTALA----------DVSIRWQLKQ--AAAPE 138
+ +VQ TV L +QS +A ++ +R+++++ AA
Sbjct 71 VIPVSVQ--------------TVLLEDQSAVIAVTRDGARVPVEIQVRYEVRKDPAAVKY 116
Query 139 LFQQYKT--FDNVRVNLIERNLSVALNEVFAGFNPLD--PRNLDVSPLPSLAKRAADILR 194
L Q+Y + ++ +IER A+ V +N ++ PR ++S +A +L
Sbjct 117 LIQKYPENPHERIKREVIERAAYEAVRSVIGKYNLVEIVPRIQEIS--EEIAAYLKQLLL 174
Query 195 QD--VGGQVDIFDVNVPTIQYDQSTEDKI-NQLNQQRAQTSIALEAQRT---AEAQAK 246
+D V +DI DV V +I + I +L Q+ + EAQ+ AE +AK
Sbjct 175 EDPSVKAAIDIVDVVVKSIDIPKELSQAILRKLAAQQEAEAAKFEAQKEIIRAEMEAK 232
>gi|27228583|ref|NP_758633.1| putative protease [Pseudomonas resinovorans]
gi|219857005|ref|YP_002474037.1| probable protease [Pseudomonas sp. CA10]
gi|26106171|dbj|BAC41611.1| probable protease [Pseudomonas resinovorans]
gi|219688933|dbj|BAH10024.1| probable protease [Pseudomonas putida]
Length=293
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 49/219 (23%), Positives = 89/219 (41%), Gaps = 19/219 (8%)
Query 39 IAAVAAAAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQI 98
IA A V LG F V ++ A++ G V+ + G H K P+ +D A I
Sbjct 19 IAVSAVIGVGLLLGSFYTVDEKERAVVLRNGAFMEVA-DPGLHWKIPF-----IDSAKAI 72
Query 99 DKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNL 158
D + +Q A VS+ W + ++++ Y D + I R++
Sbjct 73 SIQNNATKWDG-LQAYSRDQQAATLSVSVSWHVPAGEVADVYKSYADLDGLLTRAISRHV 131
Query 159 SVALNEVFAGFNPLDPRNLDVSPLPSLAKRAADI---LRQDVGGQVDIFDVNVPTIQYDQ 215
+ VF + V+ + K ADI ++ + G V I V V I +
Sbjct 132 PTQVENVFGQYTA-------VNAVQQRGKLVADIATAIKGAISGPVVIDSVQVENIDFSD 184
Query 216 STEDKINQLNQQRAQTSIALEAQRTAEAQAKANEILSRS 254
+ E I + + RA+ ++ Q+ A Q +A +++++
Sbjct 185 AYEKSIEE--RMRAEVAVKTREQQLATEQIQARIVVTQA 221
>gi|18138428|ref|NP_542529.1| hypothetical conserved protein COG330 [Halorubrum phage HF2]
gi|32453855|ref|NP_861618.1| similar to COG330 [Halovirus HF1]
gi|18000369|gb|AAL54952.1| hypothetical conserved protein COG330 [Halorubrum phage HF2]
gi|32346423|gb|AAO61329.1| similar to COG330 [Halovirus HF1]
Length=291
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 44/180 (25%), Positives = 81/180 (45%), Gaps = 24/180 (13%)
Query 111 ITVRLGNQSTALADVSIRWQLKQ--AAAPELFQQYKTFDNVRVNLIERNL---------S 159
I V+ + A DV++R+QL A + + Y+T +N +I L S
Sbjct 93 IVVKTADGVEATFDVTVRYQLPNDPEAVTDFYTDYRTLENAEKRMIRTTLAKQMLVTTGS 152
Query 160 VALNEVFAGFNPLDPRNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNVPTIQYDQS-TE 218
+ +EV+ + + + L ++ AD V V I VN P Y++S TE
Sbjct 153 MKTSEVYTSAGQTE---ITMDARSQLEEKFADTGL--VLDSVQITKVNFPQ-SYEKSITE 206
Query 219 DKINQLNQQRAQTSIALEAQRT------AEAQAKANEILSRSISDDPNVVVQNCITAAIN 272
++ Q + +A+ + + Q A +AK+NEI+++S+ ++P ++ I A N
Sbjct 207 KEVAQQRELKAEAEVEVAKQEARAQIEKARGEAKSNEIVAQSVRNNPELIQIRYIEAIKN 266
>gi|104781777|ref|YP_608275.1| hypothetical protein PSEEN2689 [Pseudomonas entomophila L48]
gi|95110764|emb|CAK15477.1| conserved hypothetical protein; putative signal peptide [Pseudomonas
entomophila L48]
Length=316
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 55/229 (25%), Positives = 91/229 (40%), Gaps = 50/229 (21%)
Query 53 CFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQIDKYVKEGNTDQRIT 112
CF V + ++T FG P+ V + G +WP P + AV +D
Sbjct 26 CFVQVRVGEATVITRFGNPSRVLIEPGLAWRWPL----PFENAVPVD------------- 68
Query 113 VRLGNQSTALADVSIR------------WQLKQAAAPELFQQYKTFDNVRVNLIERNLSV 160
+RL S+ L DV R WQ+ AA P+ Q++ + + R +
Sbjct 69 LRLRTTSSGLQDVGTRDGLRIIVQAYIAWQV--AADPQSIQRFMRAVQNQPDEAARQIRT 126
Query 161 ----ALNEVFAGFNPLDPRNLDVSPLPSLAKRAADILRQDVGGQVD-----IFDVNVPTI 211
AL +GF D N+D S + D Q + Q++ + + V +
Sbjct 127 LVGSALETSASGFELADLVNVDASQV------RIDAFEQRLQAQIEQQLAQTYGIKVVQV 180
Query 212 QYDQSTEDKIN---QLNQQRAQTSIALEAQRTAEAQAKANEILSRSISD 257
++ T K+ + + RA+ + +RTAE + KA EI S + D
Sbjct 181 GIERLTLPKVTLEATVERMRAERE-TIATERTAEGKRKAAEIRSAAERD 228
>gi|313127677|ref|YP_004037947.1| membrane protease subunit, stomatin/prohibitin [Halogeometricum
borinquense DSM 11551]
gi|312294042|gb|ADQ68502.1| membrane protease subunit, stomatin/prohibitin [Halogeometricum
borinquense DSM 11551]
Length=329
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 70/271 (26%), Positives = 112/271 (42%), Gaps = 38/271 (14%)
Query 25 PSDDTTRSRAKTVTIAAVAA---AAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFH 81
P + +S A+T IA +A AA L + V ++ +G TG G H
Sbjct 7 PPSTSPKSLARTALIAGIAVLLLAAPITGLLAWEPVEEGNVKVVKKWGATTGEVFEPGAH 66
Query 82 GKWP-WQMTHPMDGAVQIDKYVK-----EGNTDQR---ITVRLGNQSTALADVSIRWQLK 132
P Q T + +V+ Y EG QR ITV + DV++R+++
Sbjct 67 FINPISQSTASL--SVRPQSYTMSSQQGEGEQAQRDDAITVLTEDGLRTDIDVTVRYRVD 124
Query 133 QAAAPELFQQYKTFDNVRVNLIERNLSVAL---------NEVFAGFNPLDPRNLDVSPLP 183
+ + ++ Y+T + LI ++ L E++ G + L
Sbjct 125 ASKSVSFYRSYRTLETAEKRLIRPSIRSVLRTEAGRLPVTEIYTGEGQTQLKKAAEKQLS 184
Query 184 SLAKRAADILRQDVGGQVDIFDVNVPTIQYDQSTEDK-INQLNQQRAQTSIA---LEAQR 239
A IL V I +V +P QY Q+ E+K I + +Q+ Q +A LEA R
Sbjct 185 KDFAEAGLILE-----AVQIRNVELPK-QYAQAVEEKEITEQRRQQKQDELAVEKLEADR 238
Query 240 ---TAEAQAKANEILSRSISDDPNVVVQNCI 267
A+ +A AN ILS+S+ D ++ Q I
Sbjct 239 KRIAAQGEADANRILSQSL--DQRILTQKYI 267
>gi|218778574|ref|YP_002429892.1| HflC protein [Desulfatibacillum alkenivorans AK-01]
gi|218759958|gb|ACL02424.1| HflC protein [Desulfatibacillum alkenivorans AK-01]
Length=339
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query 35 KTVTIAAVAAAAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNN-GFHGKWPWQMTHPMD 93
K V + + AAV + +T+ T Q I+T FGRP G ++ + G H K PW P+
Sbjct 2 KQVIVVILIIAAVVVYSCAYTVDETEQ-VIITWFGRPVGDTITDPGIHFKLPW----PLH 56
Query 94 GAVQIDKYVKE--GNTDQRITVRLGNQSTALADVSIRWQL 131
AV K ++E G+ D+ + ++ D RW++
Sbjct 57 QAVHFPKNLQEWDGDADK---INTDDKKLLWVDTFARWKI 93
>gi|295101559|emb|CBK99104.1| Membrane protease subunits, stomatin/prohibitin homologs [Faecalibacterium
prausnitzii L2-6]
Length=303
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/93 (35%), Positives = 45/93 (49%), Gaps = 7/93 (7%)
Query 5 IVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTRQFAI 64
I+F++ + V + AL + SDD R T I AV A +F + C + V T I
Sbjct 2 ILFIIGALFV--LIALAILIFSDDAKR----TAIIPAVVAV-IFIGISCVSYVPTGYTGI 54
Query 65 MTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQ 97
+TTFG+ + + G K PWQ MD VQ
Sbjct 55 VTTFGKVEDGTKDAGVVFKAPWQSIVKMDNRVQ 87
>gi|169237406|ref|YP_001690610.1| hypothetical protein OE5091F [Halobacterium salinarum R1]
gi|167728633|emb|CAP15475.1| hypothetical protein OE5091F [Halobacterium salinarum R1]
Length=295
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/187 (25%), Positives = 83/187 (45%), Gaps = 31/187 (16%)
Query 124 DVSIRWQLKQAAAPELFQQYKTFDNVRVNLIE---------RNLSVALNEVFAGFNPLDP 174
DV+IR+++ + A + +YK LI + E++ G
Sbjct 110 DVTIRYRVNKTEAATFYDEYKDVSQAEARLIRPTTQDVLRTEGGDIDTTEIYTGAGQ--- 166
Query 175 RNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNVPTI----QYDQSTEDK-INQLNQQRA 229
+ + K+A + + VG + I V + I QY + E K + + N ++
Sbjct 167 -----KQMAAAVKKALET--EAVGSGLIIEAVQIRNIKLPGQYADAVEKKEVEKQNIEKK 219
Query 230 QTSIAL---EAQRT---AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPG 283
Q SI + EA+R A+ +A+ANEI++ S+ D+P ++ I A+N+ S + G
Sbjct 220 QNSIQVAKAEAERKRVQAKGEAEANEIVAESLKDNPELIKIRYIE-ALNQDNSTIYVGAG 278
Query 284 SSALPTI 290
S A T+
Sbjct 279 SQAGITL 285
>gi|344211206|ref|YP_004795526.1| membrane protease subunit, stomatin/prohibitin [Haloarcula hispanica
ATCC 33960]
gi|343782561|gb|AEM56538.1| membrane protease subunit, stomatin/prohibitin [Haloarcula hispanica
ATCC 33960]
Length=323
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/252 (24%), Positives = 105/252 (42%), Gaps = 31/252 (12%)
Query 39 IAAVAAAAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMDGAVQI 98
+ A+A A F G + V + +FG TG G H P + + D ++
Sbjct 30 VVALAVATALF--GGYHQVPEGHVGVQKSFGAVTGAEFQPGAHIIVPVKDS-VQDVEIRP 86
Query 99 DKYV---KEGNTDQR-----ITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVR 150
Y EG D+ +TV+ N +T D+++R+++++A A +++ +
Sbjct 87 RTYTMANTEGEGDRAAQSDAVTVQTINGTTVDIDITVRYKVEEADASGFVTEWRNVEQAE 146
Query 151 VNLIERNLSVALNEVFAGFNPLDPRNLDVSPLPSLAKRAADILRQDVGGQ------VDIF 204
LI ++ L + AG + S L + A L G+ V +
Sbjct 147 ERLIRPSVRSQLRDEAAGIQTSEIYTN--SGRERLGEAAQQKLESAFEGEALVLEEVQVR 204
Query 205 DVNVPTIQYDQSTEDKINQLNQQRAQTS------IALEAQRT---AEAQAKANEILSRSI 255
DV++P YDQ+ DK ++ +QR + E +R AEA A+ EI ++
Sbjct 205 DVDLPD-SYDQALNDK--EIAKQRVEEKKFEIQQAEREKKRQEIQAEADARVIEIRGEAL 261
Query 256 SDDPNVVVQNCI 267
D+P V+ Q +
Sbjct 262 RDNPVVLKQQYV 273
>gi|16120147|ref|NP_395735.1| hypothetical protein VNG6208C [Halobacterium sp. NRC-1]
gi|10584263|gb|AAG20870.1| Vng6208c [Halobacterium sp. NRC-1]
Length=289
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/187 (25%), Positives = 83/187 (45%), Gaps = 31/187 (16%)
Query 124 DVSIRWQLKQAAAPELFQQYKTFDNVRVNLIE---------RNLSVALNEVFAGFNPLDP 174
DV+IR+++ + A + +YK LI + E++ G
Sbjct 104 DVTIRYRVNKTEAATFYDEYKDVSQAEARLIRPTTQDVLRTEGGDIDTTEIYTGAGQ--- 160
Query 175 RNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNVPTI----QYDQSTEDK-INQLNQQRA 229
+ + K+A + + VG + I V + I QY + E K + + N ++
Sbjct 161 -----KQMAAAVKKALET--EAVGSGLIIEAVQIRNIKLPGQYADAVEKKEVEKQNIEKK 213
Query 230 QTSIAL---EAQRT---AEAQAKANEILSRSISDDPNVVVQNCITAAINKGISPLGCWPG 283
Q SI + EA+R A+ +A+ANEI++ S+ D+P ++ I A+N+ S + G
Sbjct 214 QNSIQVAKAEAERKRVQAKGEAEANEIVAESLKDNPELIKIRYIE-ALNQDNSTIYVGAG 272
Query 284 SSALPTI 290
S A T+
Sbjct 273 SQAGITL 279
>gi|300928128|ref|ZP_07143671.1| SPFH domain / Band 7 family protein [Escherichia coli MS 187-1]
gi|300463819|gb|EFK27312.1| SPFH domain / Band 7 family protein [Escherichia coli MS 187-1]
Length=302
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/208 (23%), Positives = 86/208 (42%), Gaps = 14/208 (6%)
Query 31 RSRAKTVTIAAVAAAAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTH 90
R + + V A V FL +T V + I+ ++G+ V+ G K P+
Sbjct 11 RPQKSIAIVIGVLAVVVLPFLSYYT-VNEGERGILLSYGKIVKVA-EPGLGFKIPF---- 64
Query 91 PMDGAVQIDKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVR 150
M+ +I + Q + +Q A VS+ + +K + A ++ Y T ++++
Sbjct 65 -MESVEKISTR-NQAVVYQGLQAYSRDQQPAQMTVSVSFHIKPSEAGAVYTTYNTIESLK 122
Query 151 VNLIERNLSVALNEVFAGFNPLDPRNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNVPT 210
LI R L L VF + + V L + + +R+ V G V I V +
Sbjct 123 ERLIVRQLPTQLENVFGQYTAISA----VQDRTKLVQDLQNAMRKAVVGPVVIDGVQIEN 178
Query 211 IQYDQSTEDKINQLNQQRAQTSIALEAQ 238
I + + E I ++ +A+ +IA Q
Sbjct 179 IDFSDAYEKSIE--DRMKAEVAIATRKQ 204
>gi|126011087|ref|YP_001039912.1| putative prohibitin [Streptococcus phage phi3396]
gi|124389356|gb|ABN10798.1| putative prohibitin [Streptococcus phage phi3396]
Length=280
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 60/266 (23%), Positives = 121/266 (46%), Gaps = 44/266 (16%)
Query 21 FWRLPSDDTTRSRAKTV-TIAAVAAAAVFFFLGCFTIVGTRQFAIMTTFGRPTGV---SL 76
WR+ + K V T+A + VFF T + + + +GV +L
Sbjct 1 MWRIK----MKKEEKLVFTVAFLIIGGVFFRTTAVTRIPANTVGVKVSA--TSGVQKQTL 54
Query 77 NNGFHGKWPW-QMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAA 135
+ G+H K P+ + M +VQ K ++IT + + + +++++ +
Sbjct 55 STGYHLKVPFIDKIYKMPTSVQQKKI-------KKITTQTEDAQWLDTTLDVKYRVSEKN 107
Query 136 APELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLD----PRN-----LDVSPLPSLA 186
A +F+ Y++ +NV +LI+ + A+ +V ++ + RN ++ S LA
Sbjct 108 AMNVFKDYQSMENVNKSLIKAAVQRAVEQVTVNYDIYEALGSKRNELYAEIEKSLSERLA 167
Query 187 KRAADILR-----QDVGGQVD--IFDVNVPTIQYDQSTEDKINQLNQQRAQTSIALEAQR 239
K + +++ QD G +++ I D +V Q D + +DK + + A+T ++AQ
Sbjct 168 KESIELVSVTLTDQDAGDEIEKAIKDESVKQKQVDSAKQDK--EKAKIEAETK-QIQAQA 224
Query 240 TAEAQ-------AKANEILSRSISDD 258
A+AQ A++N + SI+D+
Sbjct 225 EADAQVIKAKGEAESNNTKAASITDN 250
>gi|345371853|gb|EGX03822.1| SPFH domain / Band 7 family protein [Escherichia coli STEC_MHI813]
Length=302
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/205 (25%), Positives = 87/205 (43%), Gaps = 15/205 (7%)
Query 35 KTVTIA-AVAAAAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMD 93
K++ IA V AA V FL +T V + I+ +G+ V+ G K P+ M+
Sbjct 14 KSLAIAIGVLAAVVLPFLSYYT-VNEGERGILLRYGKIVKVA-EPGLGFKIPF-----ME 66
Query 94 GAVQIDKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNL 153
+I + Q + +Q A VS+ + +K + A ++ Y T + ++ L
Sbjct 67 SVEKISTR-NQAVVYQGLQAYSRDQQPAQMTVSVSFHIKPSEAGAVYTTYNTIEALKDRL 125
Query 154 IERNLSVALNEVFAGFNPLDPRNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNVPTIQY 213
I R L L VF + + V L + + +R+ V G V I V + I +
Sbjct 126 IVRQLPTQLENVFGQYTAISA----VQDRTKLVQDLQNAMRKAVVGPVVIDGVQIENIDF 181
Query 214 DQSTEDKINQLNQQRAQTSIALEAQ 238
+ E I ++ +A+ +IA Q
Sbjct 182 SDAYEKSIE--DRMKAEVAIATRKQ 204
>gi|24114188|ref|NP_708698.1| putative serine protease [Shigella flexneri 2a str. 301]
gi|30064247|ref|NP_838418.1| putative serine protease [Shigella flexneri 2a str. 2457T]
gi|110806840|ref|YP_690360.1| putative serine protease [Shigella flexneri 5 str. 8401]
9 more sequence titles
Length=302
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 49/205 (24%), Positives = 86/205 (42%), Gaps = 15/205 (7%)
Query 35 KTVTIA-AVAAAAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTHPMD 93
K++ IA V A V FL +T V + I+ +G+ V+ G K P+ M+
Sbjct 14 KSLAIAIGVLAVVVLPFLSYYT-VNEGERGILLRYGKIVKVA-EPGLGFKIPF-----ME 66
Query 94 GAVQIDKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVRVNL 153
+I + Q + +Q A VS+ + +K + A ++ Y T + ++ L
Sbjct 67 SVEKISTR-NQAVVYQGLQAYSRDQQPAQMTVSVSFHIKPSEAGAVYTTYNTIEALKDRL 125
Query 154 IERNLSVALNEVFAGFNPLDPRNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNVPTIQY 213
I R L L +F + + V L + + +R+ V G V I V + I +
Sbjct 126 IVRQLPTQLENIFGQYTAISA----VQDRTKLVQDLQNAMRKAVVGPVVIDGVQIENIDF 181
Query 214 DQSTEDKINQLNQQRAQTSIALEAQ 238
+ E I N+ +A+ +IA Q
Sbjct 182 SDAYEKSIE--NRMKAEVAIATRKQ 204
>gi|331674418|ref|ZP_08375178.1| putative HflC protein [Escherichia coli TA280]
gi|331068512|gb|EGI39907.1| putative HflC protein [Escherichia coli TA280]
Length=302
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 47/208 (23%), Positives = 85/208 (41%), Gaps = 14/208 (6%)
Query 31 RSRAKTVTIAAVAAAAVFFFLGCFTIVGTRQFAIMTTFGRPTGVSLNNGFHGKWPWQMTH 90
R + + V A V FL +T V + I+ +G+ V+ G K P+
Sbjct 11 RPQKSIAIVIGVLAVVVLPFLSYYT-VNEGERGILLRYGKIVKVA-EPGLGFKIPF---- 64
Query 91 PMDGAVQIDKYVKEGNTDQRITVRLGNQSTALADVSIRWQLKQAAAPELFQQYKTFDNVR 150
M+ +I + Q + +Q A VS+ + +K + A ++ Y T ++++
Sbjct 65 -MESVEKISTR-NQAVVYQGLQAYSRDQQPAQMTVSVSFHIKPSEAGAVYTNYNTIESLK 122
Query 151 VNLIERNLSVALNEVFAGFNPLDPRNLDVSPLPSLAKRAADILRQDVGGQVDIFDVNVPT 210
LI R L L VF + + V L + + +R+ V G V I V +
Sbjct 123 ERLIVRQLPTQLENVFGQYTAISA----VQDRTKLVQDLQNAMRKAVVGPVVIDGVQIEN 178
Query 211 IQYDQSTEDKINQLNQQRAQTSIALEAQ 238
I + + E I ++ +A+ +IA Q
Sbjct 179 IDFSDAYEKSIE--DRMKAEVAIATRKQ 204
>gi|19745477|ref|NP_606613.1| hypothetical protein spyM18_0361 [Streptococcus pyogenes MGAS8232]
gi|19747593|gb|AAL97112.1| hypothetical phage protein [Streptococcus pyogenes MGAS8232]
Length=275
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 64/279 (23%), Positives = 126/279 (46%), Gaps = 63/279 (22%)
Query 4 QIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGTRQFA 63
++VF V +I+ GV F+R + TR A TV + A + V +Q
Sbjct 6 KLVFTVAFLIIGGV---FFRTTA--VTRIPANTVGVKVSATSGV-----------QKQ-- 47
Query 64 IMTTFGRPTGVSLNNGFHGKWPW-QMTHPMDGAVQIDKYVKEGNTDQRITVRLGNQSTAL 122
+L+ G+H K P+ + M +VQ K ++IT + +
Sbjct 48 -----------TLSTGYHLKVPFIDKIYKMPTSVQQKKI-------KKITTQTEDAQWLD 89
Query 123 ADVSIRWQLKQAAAPELFQQYKTFDNVRVNLIERNLSVALNEVFAGFNPLD----PRN-- 176
+ +++++ + A +F+ Y++ +NV +LI+ + A+ +V ++ + RN
Sbjct 90 TTLDVKYRVSEKNAMNVFKDYQSMENVNKSLIKAAVQRAVEQVTVNYDIYEALGSKRNEL 149
Query 177 ---LDVSPLPSLAKRAADILR-----QDVGGQVD--IFDVNVPTIQYDQSTEDKINQLNQ 226
++ S LAK + +++ QD G +++ I D +V Q D + +DK + +
Sbjct 150 YAEIEKSLSERLAKESIELVSVTLTDQDAGDEIEKAIKDESVKQKQVDSAKQDK--EKAK 207
Query 227 QRAQTSIALEAQRTAEAQ-------AKANEILSRSISDD 258
A+T ++AQ A+AQ A++N + SI+D+
Sbjct 208 IEAETK-QIQAQAEADAQVIKAKGEAESNNTKAASITDN 245
>gi|330502089|ref|YP_004378958.1| P-type (transporting) HAD superfamily ATPase [Pseudomonas mendocina
NK-01]
gi|328916375|gb|AEB57206.1| ATPase, P-type (transporting), HAD superfamily, subfamily IC
[Pseudomonas mendocina NK-01]
Length=905
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/57 (30%), Positives = 31/57 (55%), Gaps = 1/57 (1%)
Query 3 WQIVFVVICVIVAGVAALFWRLPSDDTTRSRAKTVTIAAVAAAAVFFFLGCFTIVGT 59
W++V + + + AG+A W L + S A+TV + AV +F+ L C ++ G+
Sbjct 772 WRVVMISVLIAGAGIALFLWELQLGNDLSS-ARTVAVNAVVMCEIFYLLNCRSLFGS 827
Lambda K H
0.321 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 489554810128
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40