BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3095
Length=158
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610232|ref|NP_217611.1| putative transcriptional regulatory... 322 2e-86
gi|289448774|ref|ZP_06438518.1| transcriptional regulator [Mycob... 321 2e-86
gi|15842666|ref|NP_337703.1| hypothetical protein MT3179 [Mycoba... 320 4e-86
gi|240168660|ref|ZP_04747319.1| transcriptional regulatory prote... 274 3e-72
gi|183981571|ref|YP_001849862.1| transcriptional regulatory prot... 263 9e-69
gi|118618773|ref|YP_907105.1| transcriptional regulatory protein... 261 2e-68
gi|289444658|ref|ZP_06434402.1| transcriptional regulator [Mycob... 216 1e-54
gi|300782775|ref|YP_003763066.1| HxlR family transcriptional reg... 195 2e-48
gi|345012287|ref|YP_004814641.1| HxlR family transcriptional reg... 157 6e-37
gi|254514016|ref|ZP_05126077.1| transcriptional regulator family... 147 5e-34
gi|294650287|ref|ZP_06727655.1| conserved hypothetical protein [... 145 2e-33
gi|297197064|ref|ZP_06914461.1| transcriptional regulator [Strep... 145 2e-33
gi|218778009|ref|YP_002429327.1| HxlR family transcriptional reg... 145 3e-33
gi|206560001|ref|YP_002230765.1| putative DNA-binding protein [B... 145 3e-33
gi|171317486|ref|ZP_02906676.1| transcriptional regulator, HxlR ... 144 5e-33
gi|88703657|ref|ZP_01101373.1| Transcriptional regulator (DUF24)... 144 6e-33
gi|107022659|ref|YP_620986.1| HxlR family transcriptional regula... 143 7e-33
gi|226954106|ref|ZP_03824570.1| transcriptional regulator [Acine... 142 1e-32
gi|254245510|ref|ZP_04938831.1| conserved hypothetical protein [... 142 1e-32
gi|29831109|ref|NP_825743.1| hypothetical protein SAV_4566 [Stre... 142 2e-32
gi|15597909|ref|NP_251403.1| hypothetical protein PA2713 [Pseudo... 142 2e-32
gi|134099543|ref|YP_001105204.1| hypothetical protein SACE_3001 ... 142 2e-32
gi|49080826|gb|AAT50062.1| PA2713 [synthetic construct] 142 2e-32
gi|170732911|ref|YP_001764858.1| HxlR family transcriptional reg... 142 2e-32
gi|114797163|ref|YP_761047.1| hypothetical protein HNE_2352 [Hyp... 142 2e-32
gi|107099108|ref|ZP_01363026.1| hypothetical protein PaerPA_0100... 141 3e-32
gi|302529666|ref|ZP_07282008.1| transcriptional regulator [Strep... 141 4e-32
gi|154254083|ref|YP_001414907.1| HxlR family transcriptional reg... 141 4e-32
gi|330816782|ref|YP_004360487.1| Transcriptional regulator famil... 140 5e-32
gi|172060553|ref|YP_001808205.1| HxlR family transcriptional reg... 140 5e-32
gi|107102236|ref|ZP_01366154.1| hypothetical protein PaerPA_0100... 140 6e-32
gi|15595314|ref|NP_248806.1| hypothetical protein PA0116 [Pseudo... 140 6e-32
gi|49080374|gb|AAT50010.1| PA0116 [synthetic construct] 140 6e-32
gi|254252420|ref|ZP_04945738.1| hypothetical protein BDAG_01647 ... 140 6e-32
gi|254483031|ref|ZP_05096266.1| putative transcriptional regulat... 140 7e-32
gi|254243223|ref|ZP_04936545.1| hypothetical protein PA2G_04028 ... 140 7e-32
gi|126347596|emb|CAJ89308.1| putative transcriptional regulator ... 140 8e-32
gi|221213002|ref|ZP_03585978.1| putative transcriptional regulat... 140 9e-32
gi|294341299|emb|CAZ89713.1| putative Transcriptional regulator ... 139 9e-32
gi|300789468|ref|YP_003769759.1| HxlR family transcriptional reg... 139 1e-31
gi|115351535|ref|YP_773374.1| HxlR family transcriptional regula... 139 1e-31
gi|16124898|ref|NP_419462.1| hypothetical protein CC_0645 [Caulo... 139 1e-31
gi|167586191|ref|ZP_02378579.1| transcriptional regulator, HxlR ... 139 1e-31
gi|238027480|ref|YP_002911711.1| transcriptional regulator famil... 139 2e-31
gi|83643731|ref|YP_432166.1| transcriptional regulator [Hahella ... 139 2e-31
gi|149376500|ref|ZP_01894261.1| putative transcriptional regulat... 139 2e-31
gi|333912908|ref|YP_004486640.1| HxlR family transcriptional reg... 138 2e-31
gi|288916425|ref|ZP_06410803.1| transcriptional regulator, HxlR ... 138 3e-31
gi|119505383|ref|ZP_01627457.1| hypothetical protein MGP2080_142... 138 3e-31
gi|262372684|ref|ZP_06065963.1| transcriptional regulator [Acine... 138 3e-31
>gi|15610232|ref|NP_217611.1| putative transcriptional regulatory protein [Mycobacterium tuberculosis
H37Rv]
gi|31794274|ref|NP_856767.1| putative transcriptional regulatory protein [Mycobacterium bovis
AF2122/97]
gi|121638980|ref|YP_979204.1| transcriptional regulator [Mycobacterium bovis BCG str. Pasteur
1173P2]
75 more sequence titles
Length=158
Score = 322 bits (824), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/158 (100%), Positives = 158/158 (100%), Gaps = 0/158 (0%)
Query 1 MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR 60
MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR
Sbjct 1 MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR 60
Query 61 MLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT 120
MLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT
Sbjct 61 MLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT 120
Query 121 CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS 158
CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS
Sbjct 121 CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS 158
>gi|289448774|ref|ZP_06438518.1| transcriptional regulator [Mycobacterium tuberculosis CPHL_A]
gi|289421732|gb|EFD18933.1| transcriptional regulator [Mycobacterium tuberculosis CPHL_A]
Length=158
Score = 321 bits (823), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/158 (99%), Positives = 158/158 (100%), Gaps = 0/158 (0%)
Query 1 MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR 60
MA+SDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR
Sbjct 1 MAISDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR 60
Query 61 MLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT 120
MLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT
Sbjct 61 MLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT 120
Query 121 CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS 158
CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS
Sbjct 121 CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS 158
>gi|15842666|ref|NP_337703.1| hypothetical protein MT3179 [Mycobacterium tuberculosis CDC1551]
gi|13882984|gb|AAK47517.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|323718326|gb|EGB27504.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A]
Length=158
Score = 320 bits (820), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/158 (99%), Positives = 158/158 (100%), Gaps = 0/158 (0%)
Query 1 MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR 60
MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR
Sbjct 1 MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR 60
Query 61 MLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT 120
MLVE+GLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT
Sbjct 61 MLVELGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT 120
Query 121 CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS 158
CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS
Sbjct 121 CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS 158
>gi|240168660|ref|ZP_04747319.1| transcriptional regulatory protein [Mycobacterium kansasii ATCC
12478]
Length=159
Score = 274 bits (700), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/158 (84%), Positives = 146/158 (93%), Gaps = 0/158 (0%)
Query 1 MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR 60
M ++LSHRF+GESVGRALELVGERWTLLILREAFFGV+RFGQLARNL IPRPTLSSRLR
Sbjct 1 MHPAELSHRFDGESVGRALELVGERWTLLILREAFFGVQRFGQLARNLNIPRPTLSSRLR 60
Query 61 MLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT 120
MLV+VGL DRVPYS DPERHEYRLTEAGR+LFAAIVVLM+WGDE+LP P+GPPI LRHHT
Sbjct 61 MLVDVGLLDRVPYSRDPERHEYRLTEAGRELFAAIVVLMRWGDEHLPHPDGPPIMLRHHT 120
Query 121 CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS 158
CGE DPRL+C HCGEEITARNVTPE GPGF+ +L++S
Sbjct 121 CGELVDPRLVCMHCGEEITARNVTPEAGPGFRDRLSAS 158
>gi|183981571|ref|YP_001849862.1| transcriptional regulatory protein [Mycobacterium marinum M]
gi|183174897|gb|ACC40007.1| transcriptional regulatory protein [Mycobacterium marinum M]
Length=158
Score = 263 bits (671), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 127/157 (81%), Positives = 138/157 (88%), Gaps = 1/157 (0%)
Query 1 MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR 60
M +DLSHRFEGESVGRALELVGERWTLLILREAFFGV+RFGQLARNL IPRPTLSSRLR
Sbjct 1 MGAADLSHRFEGESVGRALELVGERWTLLILREAFFGVQRFGQLARNLNIPRPTLSSRLR 60
Query 61 MLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT 120
MLV GL DRVPYS DPERHEYRLT+ G +LFAAIVVLMQWGD++LP P+GPPI LRHH
Sbjct 61 MLVNAGLLDRVPYSQDPERHEYRLTDTGHELFAAIVVLMQWGDKHLPNPDGPPIVLRHH- 119
Query 121 CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLAS 157
CG+ +PRLIC HCGEEITARNVTPE GPGF +A+
Sbjct 120 CGQFVEPRLICAHCGEEITARNVTPEAGPGFGDAVAA 156
>gi|118618773|ref|YP_907105.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
gi|118570883|gb|ABL05634.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
Length=158
Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/157 (81%), Positives = 138/157 (88%), Gaps = 1/157 (0%)
Query 1 MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLR 60
M +DLSHRFEGESVGRALELVGERWTLLILREAFFGV+RFGQLARNL IPRPTLSSRLR
Sbjct 1 MGAADLSHRFEGESVGRALELVGERWTLLILREAFFGVQRFGQLARNLNIPRPTLSSRLR 60
Query 61 MLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHT 120
MLV GL DRVPYS DPERHEYRLT+ G +LFAAIVVLMQWGD++LP P+GPPI LRHH
Sbjct 61 MLVNAGLLDRVPYSQDPERHEYRLTDTGHELFAAIVVLMQWGDKHLPNPDGPPIVLRHH- 119
Query 121 CGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLAS 157
CG+ +PRLIC HCGEEITARNVTPE GPG+ +A+
Sbjct 120 CGQFVEPRLICAHCGEEITARNVTPEAGPGYGDAVAA 156
>gi|289444658|ref|ZP_06434402.1| transcriptional regulator [Mycobacterium tuberculosis T46]
gi|289417577|gb|EFD14817.1| transcriptional regulator [Mycobacterium tuberculosis T46]
Length=104
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/104 (99%), Positives = 104/104 (100%), Gaps = 0/104 (0%)
Query 55 LSSRLRMLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPI 114
+SSRLRMLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPI
Sbjct 1 MSSRLRMLVEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPI 60
Query 115 KLRHHTCGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS 158
KLRHHTCGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS
Sbjct 61 KLRHHTCGEHADPRLICTHCGEEITARNVTPEPGPGFKAKLASS 104
>gi|300782775|ref|YP_003763066.1| HxlR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|299792289|gb|ADJ42664.1| HxlR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|340524149|gb|AEK39354.1| HxlR family transcriptional regulator [Amycolatopsis mediterranei
S699]
Length=145
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/150 (65%), Positives = 116/150 (78%), Gaps = 5/150 (3%)
Query 3 VSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRML 62
++ L HRF +SVGRAL+LVGERW+LLILRE+FFGVRR+G+ ARNL IPRPTLS+RL+ L
Sbjct 1 MTGLGHRFTADSVGRALDLVGERWSLLILRESFFGVRRYGEFARNLAIPRPTLSARLKTL 60
Query 63 VEVGLFDRVPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCG 122
V+ G+ +RV DP EY LT AGRDLF A+V LMQWGD++L PEGPPI LRHH CG
Sbjct 61 VDAGVLERV----DPV-PEYVLTAAGRDLFGAVVTLMQWGDQHLAGPEGPPILLRHHDCG 115
Query 123 EHADPRLICTHCGEEITARNVTPEPGPGFK 152
E A + C HCG IT+ VTPEPGPGF+
Sbjct 116 EIAGTFVACRHCGGAITSDRVTPEPGPGFR 145
>gi|345012287|ref|YP_004814641.1| HxlR family transcriptional regulator [Streptomyces violaceusniger
Tu 4113]
gi|344038636|gb|AEM84361.1| transcriptional regulator, HxlR family [Streptomyces violaceusniger
Tu 4113]
Length=158
Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/136 (59%), Positives = 95/136 (70%), Gaps = 5/136 (3%)
Query 13 ESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVP 72
+SV R L LVGERWT+LILREAFFGV+R+GQ A+NLGIPRPTLS+RL LV+VGL R
Sbjct 16 DSVTRTLNLVGERWTMLILREAFFGVQRYGQFAQNLGIPRPTLSNRLGKLVDVGLLIRER 75
Query 73 YSSDPER--HEYRLTEAGRDLFAAIVVLMQWGDEYLPRP---EGPPIKLRHHTCGEHADP 127
Y+ P R +EYRLT+AG DLF AI +LM+WG+ YLP G + H CG P
Sbjct 76 YAGGPIRSDYEYRLTQAGLDLFPAIQILMEWGNTYLPDDPAGSGSTVAWTHDVCGSPTHP 135
Query 128 RLICTHCGEEITARNV 143
RL C CGE +TA NV
Sbjct 136 RLTCDQCGEPVTAHNV 151
>gi|254514016|ref|ZP_05126077.1| transcriptional regulator family [gamma proteobacterium NOR5-3]
gi|219676259|gb|EED32624.1| transcriptional regulator family [gamma proteobacterium NOR5-3]
Length=174
Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/138 (52%), Positives = 91/138 (66%), Gaps = 0/138 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV RAL +VGERWTLLILR+AFFG RRF Q NLGI R LS RL LVE G+ RV Y
Sbjct 12 SVARALSVVGERWTLLILRDAFFGTRRFDQFQSNLGITRHRLSERLNKLVEQGVLTRVQY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
S P RHEYRLT G L+ +++L +WGDE++ R +G P++ H CG+ P + C+
Sbjct 72 SEKPPRHEYRLTRKGLGLYPVLMMLGRWGDEWMDRGDGAPVEYFHQRCGKKTLPVMTCSE 131
Query 134 CGEEITARNVTPEPGPGF 151
C E++ ++VTP GP
Sbjct 132 CHEDLRPQHVTPMVGPAL 149
>gi|294650287|ref|ZP_06727655.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292823817|gb|EFF82652.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length=160
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/140 (47%), Positives = 89/140 (64%), Gaps = 0/140 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF GVRRF R+LG+ R LS RL+ LVE + +VPY
Sbjct 12 SVARTLSILGDRWTMLILRNAFMGVRRFDDFQRSLGLTRHVLSERLKRLVEHDILVKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
ER EY+LTE G DL+ I+ + QW D+++ G PI+ H TCG P+++C+
Sbjct 72 VERQERFEYKLTEKGLDLYPIILSMTQWADKWMDMGLGKPIEFTHKTCGNKMTPKMVCSE 131
Query 134 CGEEITARNVTPEPGPGFKA 153
C E+I A+ V GPG+ A
Sbjct 132 CNEQIKAKEVRASAGPGYFA 151
>gi|297197064|ref|ZP_06914461.1| transcriptional regulator [Streptomyces sviceus ATCC 29083]
gi|197714060|gb|EDY58094.1| transcriptional regulator [Streptomyces sviceus ATCC 29083]
Length=165
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/143 (45%), Positives = 94/143 (66%), Gaps = 0/143 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R ++L+G+ WT L+LREAF+G++RF +LGI R TL+ RLR LV+ GL ++ PY
Sbjct 12 SIARTMDLLGDWWTPLVLREAFYGIKRFDGFQESLGIARNTLTDRLRRLVDEGLLEKRPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
++P RH+Y LTE GRD + ++ + +WGD +L GPP+ H CG+ + ++C
Sbjct 72 QTEPVRHDYVLTEKGRDFYGVLLAMNRWGDRWLAGEAGPPVTSYHDVCGQESHAEVVCAA 131
Query 134 CGEEITARNVTPEPGPGFKAKLA 156
CGE +TA N P GPG+ +LA
Sbjct 132 CGEPMTAENTHPRMGPGYPPRLA 154
>gi|218778009|ref|YP_002429327.1| HxlR family transcriptional regulator [Desulfatibacillum alkenivorans
AK-01]
gi|218759393|gb|ACL01859.1| transcriptional regulator, HxlR family [Desulfatibacillum alkenivorans
AK-01]
Length=157
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/138 (48%), Positives = 90/138 (66%), Gaps = 0/138 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SVGR LE++G+RWT +ILREAFFGVR + Q NLGI LS RL+ LV G+ ++
Sbjct 11 SVGRVLEILGDRWTFMILREAFFGVRYYDQFQANLGIASNILSDRLKSLVSNGILNKRKD 70
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
D R YR ++ G +L++ + LM+WGD++L EGPP++L H TCG +P + C H
Sbjct 71 PEDARRVVYRFSQKGVELYSVTLALMRWGDKWLSGEEGPPLRLHHKTCGHDLEPMMCCAH 130
Query 134 CGEEITARNVTPEPGPGF 151
C EEI A +V+ E GPG
Sbjct 131 CREEIRAFDVSYESGPGL 148
>gi|206560001|ref|YP_002230765.1| putative DNA-binding protein [Burkholderia cenocepacia J2315]
gi|198036042|emb|CAR51936.1| putative DNA-binding protein [Burkholderia cenocepacia J2315]
Length=162
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/141 (49%), Positives = 91/141 (65%), Gaps = 0/141 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV RAL ++G+RWT+LILR AF G RRF LG+ R L+ RL LV+ G+ + Y
Sbjct 12 SVARALAVLGDRWTMLILRNAFLGSRRFDAFQAQLGLTRHVLAERLARLVDEGVLVKRAY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G DL+ A++ LM WGD + +GPP++LRH TCG+ +C+
Sbjct 72 QERPPRFEYRLTEKGLDLYPALLALMAWGDRWKDDGQGPPVQLRHRTCGQLMHAVTVCSA 131
Query 134 CGEEITARNVTPEPGPGFKAK 154
CGE + AR+V PEPGPG+ A
Sbjct 132 CGEPLDARDVQPEPGPGWIAS 152
>gi|171317486|ref|ZP_02906676.1| transcriptional regulator, HxlR family [Burkholderia ambifaria
MEX-5]
gi|171097315|gb|EDT42160.1| transcriptional regulator, HxlR family [Burkholderia ambifaria
MEX-5]
Length=160
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/144 (48%), Positives = 92/144 (64%), Gaps = 0/144 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF G RRF LG+ R L+ RL LV+ G+ + Y
Sbjct 12 SVARTLAVLGDRWTMLILRNAFLGCRRFDAFQTQLGLTRHVLAERLARLVDEGVLVKRAY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G DL+ A++ LM WGD + +GPP++LRHHTCG+ +C+
Sbjct 72 QERPPRFEYRLTEKGLDLYPALLALMTWGDRWKDDGQGPPLQLRHHTCGQLMHAVAVCSA 131
Query 134 CGEEITARNVTPEPGPGFKAKLAS 157
CGE + A +V PEPGPG+ A A+
Sbjct 132 CGEPLDAHDVQPEPGPGWVAPEAT 155
>gi|88703657|ref|ZP_01101373.1| Transcriptional regulator (DUF24) [Congregibacter litoralis KT71]
gi|88702371|gb|EAQ99474.1| Transcriptional regulator (DUF24) [Congregibacter litoralis KT71]
Length=203
Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 91/138 (66%), Gaps = 0/138 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV RAL +VGERWTLLILR+AFFG RRF Q NLGI R LS RL LV+ G+ RV Y
Sbjct 35 SVARALSVVGERWTLLILRDAFFGTRRFDQFQSNLGITRHRLSERLGKLVDQGVLTRVKY 94
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
S P R+EYRLT G L+ +++L +WGDE++ R +G P++ H CG+ P + C+
Sbjct 95 SEKPPRYEYRLTRKGLGLYPVLMMLGRWGDEWMDRGDGAPVEYFHQRCGKKTRPLMTCSE 154
Query 134 CGEEITARNVTPEPGPGF 151
C E++ ++VTP GP
Sbjct 155 CHEDLRPQHVTPMVGPAL 172
>gi|107022659|ref|YP_620986.1| HxlR family transcriptional regulator [Burkholderia cenocepacia
AU 1054]
gi|116689608|ref|YP_835231.1| HxlR family transcriptional regulator [Burkholderia cenocepacia
HI2424]
gi|105892848|gb|ABF76013.1| transcriptional regulator, HxlR family [Burkholderia cenocepacia
AU 1054]
gi|116647697|gb|ABK08338.1| transcriptional regulator, HxlR family [Burkholderia cenocepacia
HI2424]
Length=162
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/138 (49%), Positives = 89/138 (65%), Gaps = 0/138 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF G RRF LG+ R L+ RL LV+ G+ + Y
Sbjct 12 SVARTLAVLGDRWTMLILRNAFLGCRRFDAFQTQLGVTRHVLAERLARLVDEGVLVKRAY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G DL+ A++ LM WGD + +GPP++LRH TCG+ +C+
Sbjct 72 QERPPRFEYRLTEKGLDLYPALLALMAWGDRWKDDGQGPPVQLRHRTCGQLMHAVTVCSA 131
Query 134 CGEEITARNVTPEPGPGF 151
CGE + AR+V PEPGPG+
Sbjct 132 CGEPLDARDVQPEPGPGW 149
>gi|226954106|ref|ZP_03824570.1| transcriptional regulator [Acinetobacter sp. ATCC 27244]
gi|226835147|gb|EEH67530.1| transcriptional regulator [Acinetobacter sp. ATCC 27244]
Length=160
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/142 (46%), Positives = 89/142 (63%), Gaps = 0/142 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF GVRRF R+LG+ R LS RL+ LVE + +VPY
Sbjct 12 SVARTLSILGDRWTMLILRNAFMGVRRFDDFQRSLGLTRHVLSERLKRLVEHDILVKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
ER EY+LTE G DL+ I+ + QW D+++ G PI+ H TCG P+++C+
Sbjct 72 VERQERFEYKLTEKGLDLYPIILSMTQWADKWMDMGLGKPIEFTHKTCGNKMTPKMVCSE 131
Query 134 CGEEITARNVTPEPGPGFKAKL 155
C E I A+ V GPG+ A +
Sbjct 132 CNEPIKAKEVRASAGPGYFAYI 153
>gi|254245510|ref|ZP_04938831.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
gi|124870286|gb|EAY62002.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
Length=162
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/141 (48%), Positives = 89/141 (64%), Gaps = 0/141 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF G RRF LG+ R L+ RL LV+ G+ + Y
Sbjct 12 SVARTLAVLGDRWTMLILRNAFLGCRRFDAFQAQLGLTRHVLAERLARLVDEGVLVKRAY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G DL+ A++ LM WGD + +GPP++LRH CG+ +C+
Sbjct 72 QERPPRFEYRLTEKGLDLYPALLALMAWGDRWKDDGQGPPVQLRHRACGQLMHAVTVCSA 131
Query 134 CGEEITARNVTPEPGPGFKAK 154
CGE + AR+V PEPGPG+ A
Sbjct 132 CGEPLDARDVQPEPGPGWIAS 152
>gi|29831109|ref|NP_825743.1| hypothetical protein SAV_4566 [Streptomyces avermitilis MA-4680]
gi|29608223|dbj|BAC72278.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=215
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/143 (44%), Positives = 93/143 (66%), Gaps = 0/143 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R ++L+G+ WT L+LREAF+GVRRF ++LGI R TL+ RLR LV+ GL ++ PY
Sbjct 62 SIARTMDLLGDWWTPLVLREAFYGVRRFDAFQQSLGIARNTLTDRLRRLVDEGLMEKQPY 121
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
++P RH+Y LT+ GRD + ++ + WGD +L +G P+ H CG ++C+
Sbjct 122 QNEPVRHDYVLTDKGRDFYGVLMAMNAWGDRWLAGEQGAPVVFHHERCGRQGHAEVVCSE 181
Query 134 CGEEITARNVTPEPGPGFKAKLA 156
CGE +TA + P GPG+ +LA
Sbjct 182 CGEPMTATDTRPRLGPGYPPRLA 204
>gi|15597909|ref|NP_251403.1| hypothetical protein PA2713 [Pseudomonas aeruginosa PAO1]
gi|116050698|ref|YP_790482.1| putative transcriptional regulator [Pseudomonas aeruginosa UCBPP-PA14]
gi|218891126|ref|YP_002439992.1| putative transcriptional regulator [Pseudomonas aeruginosa LESB58]
12 more sequence titles
Length=159
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/148 (46%), Positives = 91/148 (62%), Gaps = 3/148 (2%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R+L ++G+RWTLLILR F G+RRF + +LG+ R L+ RL LVE G +VPY
Sbjct 12 SMARSLAILGDRWTLLILRNCFLGMRRFDEFQASLGVTRQVLADRLSRLVEAGALKKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R+EYRLTE G DL ++ L WGD +L G P++ H CG P ++C
Sbjct 72 QERPPRYEYRLTEMGHDLHPVLLALANWGDRWLDEGRGAPVEYVHKACGHKFRPTMVCPE 131
Query 134 CGEEITARNVTPEPGPGFKA---KLASS 158
CGE + +R+VT PGPGF A KLA +
Sbjct 132 CGEPVGSRDVTAVPGPGFAAMAGKLAQN 159
>gi|134099543|ref|YP_001105204.1| hypothetical protein SACE_3001 [Saccharopolyspora erythraea NRRL
2338]
gi|291009273|ref|ZP_06567246.1| hypothetical protein SeryN2_32538 [Saccharopolyspora erythraea
NRRL 2338]
gi|133912166|emb|CAM02279.1| hypothetical protein SACE_3001 [Saccharopolyspora erythraea NRRL
2338]
Length=165
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/144 (46%), Positives = 90/144 (63%), Gaps = 0/144 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R ++L+G+ WT L+LREAF+GVRRF + LGI R TLS RLR LVE GL ++ Y
Sbjct 12 SIARTMDLLGDWWTPLVLREAFYGVRRFDDFQQELGIARNTLSERLRRLVEEGLLEKQQY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
+ P R+EY LTE GRD F + + +WGD +L EGPP+ L H CG + ++C
Sbjct 72 DTAPARYEYLLTEKGRDFFGVLAAMSRWGDRWLVGEEGPPVTLHHDRCGHDSHAEVVCAV 131
Query 134 CGEEITARNVTPEPGPGFKAKLAS 157
CGE + A + GPG+ +LA
Sbjct 132 CGEPLRAEETSKRMGPGYPPRLAD 155
>gi|49080826|gb|AAT50062.1| PA2713 [synthetic construct]
Length=160
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/148 (46%), Positives = 91/148 (62%), Gaps = 3/148 (2%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R+L ++G+RWTLLILR F G+RRF + +LG+ R L+ RL LVE G +VPY
Sbjct 12 SMARSLAILGDRWTLLILRNCFLGMRRFDEFQASLGVTRQVLADRLSRLVEAGALKKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R+EYRLTE G DL ++ L WGD +L G P++ H CG P ++C
Sbjct 72 QERPPRYEYRLTEMGHDLHPVLLALANWGDRWLDEGRGAPVEYVHKACGHKFRPTMVCPE 131
Query 134 CGEEITARNVTPEPGPGFKA---KLASS 158
CGE + +R+VT PGPGF A KLA +
Sbjct 132 CGEPVGSRDVTAVPGPGFAAMAGKLAQN 159
>gi|170732911|ref|YP_001764858.1| HxlR family transcriptional regulator [Burkholderia cenocepacia
MC0-3]
gi|169816153|gb|ACA90736.1| transcriptional regulator, HxlR family [Burkholderia cenocepacia
MC0-3]
Length=162
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/138 (48%), Positives = 88/138 (64%), Gaps = 0/138 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF G RRF LG+ R L+ RL LV+ G+ + Y
Sbjct 12 SVARTLAVLGDRWTMLILRNAFLGCRRFDAFQTQLGLTRHVLAERLARLVDEGVLVKRAY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G DL+ ++ LM WGD + +GPP++LRH TCG+ +C+
Sbjct 72 QERPPRFEYRLTEKGLDLYPTLLALMAWGDRWKDDGQGPPVQLRHRTCGQLMHAMTVCSA 131
Query 134 CGEEITARNVTPEPGPGF 151
CGE + AR+V PEPGPG+
Sbjct 132 CGEPLDARDVQPEPGPGW 149
>gi|114797163|ref|YP_761047.1| hypothetical protein HNE_2352 [Hyphomonas neptunium ATCC 15444]
gi|114737337|gb|ABI75462.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length=160
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/140 (49%), Positives = 87/140 (63%), Gaps = 0/140 (0%)
Query 11 EGESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDR 70
E S+ RA+ +VG+RWTLL+LREAF VRRF LGI R L+ RL+ LV+ G+ ++
Sbjct 9 ENCSLARAMAVVGDRWTLLVLREAFLRVRRFDDFQERLGIARRVLTERLKHLVDHGVLEK 68
Query 71 VPYSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLI 130
V YS P RHEYRLTE G L+ I+ L+ WGD Y +GPP+ RH CG L
Sbjct 69 VAYSQTPLRHEYRLTEKGLALYPVIISLVHWGDAYYAGKKGPPVLHRHQACGHDFRSVLT 128
Query 131 CTHCGEEITARNVTPEPGPG 150
C+ CGE + R V+P GPG
Sbjct 129 CSECGEALDPREVSPHAGPG 148
>gi|107099108|ref|ZP_01363026.1| hypothetical protein PaerPA_01000117 [Pseudomonas aeruginosa
PACS2]
gi|218888861|ref|YP_002437725.1| putative transcriptional regulator [Pseudomonas aeruginosa LESB58]
gi|254237642|ref|ZP_04930965.1| hypothetical protein PACG_03727 [Pseudomonas aeruginosa C3719]
gi|126169573|gb|EAZ55084.1| hypothetical protein PACG_03727 [Pseudomonas aeruginosa C3719]
gi|218769084|emb|CAW24844.1| putative transcriptional regulator [Pseudomonas aeruginosa LESB58]
gi|334840552|gb|EGM19203.1| putative transcriptional regulator [Pseudomonas aeruginosa 138244]
Length=157
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/142 (48%), Positives = 93/142 (66%), Gaps = 0/142 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R L +VG+RWTLL+LR+ F GVRRF R+LG+ R L+ RL+ LVE + +VPY
Sbjct 12 SLARVLAIVGDRWTLLVLRDCFLGVRRFDDFERSLGVTRHVLADRLKRLVEAEILAKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G +L+ AI+ L+ WGD +L EGPP++ H CG+H L+C+
Sbjct 72 QERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSE 131
Query 134 CGEEITARNVTPEPGPGFKAKL 155
CGE + AR+VT G +K +L
Sbjct 132 CGEPLHARDVTVREGLFWKGRL 153
>gi|302529666|ref|ZP_07282008.1| transcriptional regulator [Streptomyces sp. AA4]
gi|302438561|gb|EFL10377.1| transcriptional regulator [Streptomyces sp. AA4]
Length=180
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/144 (44%), Positives = 92/144 (64%), Gaps = 0/144 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R ++L+G+ WT L+LR+AF+GVRRF + + LGI R TL+ RLR LV+ GL ++ Y
Sbjct 25 SIARTMDLLGDWWTPLVLRDAFYGVRRFDEFQQALGIARNTLADRLRRLVDEGLLEKRAY 84
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
++P R++Y LTE GRD ++ + + WGD +L GPPI L H TCG ++C
Sbjct 85 QAEPVRYDYVLTEKGRDFWSVLAAMTAWGDRWLATEAGPPIVLHHETCGHDTTATVVCAD 144
Query 134 CGEEITARNVTPEPGPGFKAKLAS 157
CGE ++A + GPGF +LA
Sbjct 145 CGEPLSAEDTRMRRGPGFPERLAQ 168
>gi|154254083|ref|YP_001414907.1| HxlR family transcriptional regulator [Parvibaculum lavamentivorans
DS-1]
gi|154158033|gb|ABS65250.1| transcriptional regulator, HxlR family [Parvibaculum lavamentivorans
DS-1]
Length=164
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/141 (48%), Positives = 89/141 (64%), Gaps = 0/141 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R L +VG+RWTLL+LRE F VRRF + + LGI R L+ RL+ L + G+ ++VPY
Sbjct 12 SLARTLSVVGDRWTLLVLRECFLRVRRFEEFEQRLGIARHVLADRLKKLSDAGVLEKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G L+ A+ L+ WGD Y+ PEG PI RH +CG IC+
Sbjct 72 QERPRREEYRLTEKGLALYPALQALLDWGDAYMSGPEGAPIIRRHKSCGHAMHAVQICSE 131
Query 134 CGEEITARNVTPEPGPGFKAK 154
CGE AR++T E GPG + +
Sbjct 132 CGEPFGARDITAELGPGAQGE 152
>gi|330816782|ref|YP_004360487.1| Transcriptional regulator family protein [Burkholderia gladioli
BSR3]
gi|327369175|gb|AEA60531.1| Transcriptional regulator family protein [Burkholderia gladioli
BSR3]
Length=158
Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/139 (46%), Positives = 89/139 (65%), Gaps = 0/139 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+L+LR AFFGVRRF LG+ R L+ RL LV+ G+F ++ Y
Sbjct 12 SVARTLAVLGDRWTMLVLRNAFFGVRRFDAFQAQLGVTRHVLAERLARLVDEGIFVKLRY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R+EY+L+E GRDL+ ++ L WGD + GPP+ LRH +CG P ++C+
Sbjct 72 QERPPRYEYKLSEKGRDLYPVLLALTAWGDRWKDEGAGPPVLLRHRSCGHLVKPVMVCSE 131
Query 134 CGEEITARNVTPEPGPGFK 152
CGE + R + P PGPG +
Sbjct 132 CGEPLDPREIEPLPGPGLQ 150
>gi|172060553|ref|YP_001808205.1| HxlR family transcriptional regulator [Burkholderia ambifaria
MC40-6]
gi|171993070|gb|ACB63989.1| transcriptional regulator, HxlR family [Burkholderia ambifaria
MC40-6]
Length=160
Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/144 (48%), Positives = 90/144 (63%), Gaps = 0/144 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF G RRF LG+ R L+ RL LV+ G+ + Y
Sbjct 12 SVARTLAVLGDRWTMLILRNAFLGCRRFDAFQTQLGLTRHVLAERLARLVDEGVLVKRAY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G DL+ A++ LM WGD + +GPP++LRH CGE +C+
Sbjct 72 QERPPRFEYRLTEKGLDLYPALLALMTWGDRWKDDGQGPPLQLRHRNCGELMHAVAVCSA 131
Query 134 CGEEITARNVTPEPGPGFKAKLAS 157
CGE + A +V PEPGPG+ A A+
Sbjct 132 CGEPLDAHDVQPEPGPGWVAPEAA 155
>gi|107102236|ref|ZP_01366154.1| hypothetical protein PaerPA_01003288 [Pseudomonas aeruginosa
PACS2]
Length=147
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/147 (46%), Positives = 90/147 (62%), Gaps = 3/147 (2%)
Query 15 VGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPYS 74
+ R+L ++G+RWTLLILR F G+RRF + +LG+ R L+ RL LVE G +VPY
Sbjct 1 MARSLAILGDRWTLLILRNCFLGMRRFDEFQASLGVTRQVLADRLSRLVEAGALKKVPYQ 60
Query 75 SDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTHC 134
P R+EYRLTE G DL ++ L WGD +L G P++ H CG P ++C C
Sbjct 61 ERPPRYEYRLTEMGHDLHPVLLALANWGDRWLDEGRGAPVEYVHKACGHKFRPTMVCPEC 120
Query 135 GEEITARNVTPEPGPGFKA---KLASS 158
GE + +R+VT PGPGF A KLA +
Sbjct 121 GEPVGSRDVTAVPGPGFAAMAGKLAQN 147
>gi|15595314|ref|NP_248806.1| hypothetical protein PA0116 [Pseudomonas aeruginosa PAO1]
gi|116053837|ref|YP_788274.1| hypothetical protein PA14_01410 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296386603|ref|ZP_06876102.1| hypothetical protein PaerPAb_00665 [Pseudomonas aeruginosa PAb1]
gi|313112319|ref|ZP_07798086.1| putative transcriptional regulator [Pseudomonas aeruginosa 39016]
gi|9945944|gb|AAG03506.1|AE004450_1 hypothetical protein PA0116 [Pseudomonas aeruginosa PAO1]
gi|115589058|gb|ABJ15073.1| putative transcriptional regulator [Pseudomonas aeruginosa UCBPP-PA14]
gi|310884588|gb|EFQ43182.1| putative transcriptional regulator [Pseudomonas aeruginosa 39016]
gi|334838640|gb|EGM17352.1| hypothetical protein PA15_19253 [Pseudomonas aeruginosa 152504]
Length=157
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/142 (48%), Positives = 93/142 (66%), Gaps = 0/142 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R L ++G+RWTLL+LR+ F GVRRF R+LG+ R L+ RL+ LVE + +VPY
Sbjct 12 SLARVLAILGDRWTLLVLRDCFLGVRRFDDFERSLGVTRHVLADRLKRLVEAEILAKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G +L+ AI+ L+ WGD +L EGPP++ H CG+H L+C+
Sbjct 72 QERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSE 131
Query 134 CGEEITARNVTPEPGPGFKAKL 155
CGE + AR+VT G +K +L
Sbjct 132 CGEPLHARDVTVREGLFWKGRL 153
>gi|49080374|gb|AAT50010.1| PA0116 [synthetic construct]
Length=158
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/142 (48%), Positives = 93/142 (66%), Gaps = 0/142 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R L ++G+RWTLL+LR+ F GVRRF R+LG+ R L+ RL+ LVE + +VPY
Sbjct 12 SLARVLAILGDRWTLLVLRDCFLGVRRFDDFERSLGVTRHVLADRLKRLVEAEILAKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G +L+ AI+ L+ WGD +L EGPP++ H CG+H L+C+
Sbjct 72 QERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSE 131
Query 134 CGEEITARNVTPEPGPGFKAKL 155
CGE + AR+VT G +K +L
Sbjct 132 CGEPLHARDVTVREGLFWKGRL 153
>gi|254252420|ref|ZP_04945738.1| hypothetical protein BDAG_01647 [Burkholderia dolosa AUO158]
gi|124895029|gb|EAY68909.1| hypothetical protein BDAG_01647 [Burkholderia dolosa AUO158]
Length=160
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/140 (49%), Positives = 88/140 (63%), Gaps = 0/140 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF G RRF LG+ R L+ RL LV+ G+ + Y
Sbjct 12 SVARTLAVLGDRWTMLILRNAFLGCRRFEAFQAQLGVTRHVLAERLARLVDEGVLIKRAY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE GRDL+ A++ LM WGD + +GPP++LRH TCG +C+
Sbjct 72 QERPPRFEYRLTEKGRDLYPALLALMTWGDRWKDDGQGPPLQLRHRTCGHVMHALAVCSA 131
Query 134 CGEEITARNVTPEPGPGFKA 153
CGE + R V PEPGPG+ A
Sbjct 132 CGEPLDPREVRPEPGPGWIA 151
>gi|254483031|ref|ZP_05096266.1| putative transcriptional regulator family protein [marine gamma
proteobacterium HTCC2148]
gi|214036716|gb|EEB77388.1| putative transcriptional regulator family protein [marine gamma
proteobacterium HTCC2148]
Length=174
Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/139 (48%), Positives = 86/139 (62%), Gaps = 0/139 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R+L +VGERWT+LI+R+AF G RRF Q NLGI R LS RL LV+ G+ +VPY
Sbjct 12 SVARSLSVVGERWTMLIIRDAFLGTRRFDQFQSNLGITRHRLSERLGKLVDAGVLVKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
+ P RHEYRLT G L+ ++ L WGDE++ + EG P++ H CG+ P L C+
Sbjct 72 NERPLRHEYRLTRKGLGLYPVLMSLAHWGDEWMDKGEGAPLEYVHQNCGQKTQPTLTCSE 131
Query 134 CGEEITARNVTPEPGPGFK 152
C E + VTP G K
Sbjct 132 CHEPLRPEEVTPRLGSALK 150
>gi|254243223|ref|ZP_04936545.1| hypothetical protein PA2G_04028 [Pseudomonas aeruginosa 2192]
gi|126196601|gb|EAZ60664.1| hypothetical protein PA2G_04028 [Pseudomonas aeruginosa 2192]
Length=157
Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/142 (48%), Positives = 93/142 (66%), Gaps = 0/142 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R L ++G+RWTLL+LR+ F GVRRF R+LG+ R L+ RL+ LVE + +VPY
Sbjct 12 SLARVLAILGDRWTLLVLRDCFLGVRRFDDFERSLGVTRHVLADRLKRLVEAEILAKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G +L+ AI+ L+ WGD +L EGPP++ H CG+H L+C+
Sbjct 72 QERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSE 131
Query 134 CGEEITARNVTPEPGPGFKAKL 155
CGE + AR+VT G +K +L
Sbjct 132 CGEPLRARDVTVREGLFWKGRL 153
>gi|126347596|emb|CAJ89308.1| putative transcriptional regulator [Streptomyces ambofaciens
ATCC 23877]
Length=175
Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/142 (46%), Positives = 86/142 (61%), Gaps = 0/142 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R +L+G+ WTLL+LRE F+G RF +LGI R TL+ RLR L E GL R Y
Sbjct 16 SIARTADLLGDAWTLLVLREIFYGESRFDGFIDSLGIARNTLTDRLRRLEEAGLLTRRSY 75
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
+DP RHEY TE GRD F + + WGD +L EG P+ +RH CG R++C+
Sbjct 76 QTDPVRHEYLPTEKGRDFFGVLAAINAWGDRWLADDEGVPVVMRHTACGHDMQARVVCSS 135
Query 134 CGEEITARNVTPEPGPGFKAKL 155
CGE + +NVT GPG+ +L
Sbjct 136 CGELLDDKNVTVRTGPGYPPRL 157
>gi|221213002|ref|ZP_03585978.1| putative transcriptional regulator [Burkholderia multivorans
CGD1]
gi|221167215|gb|EED99685.1| putative transcriptional regulator [Burkholderia multivorans
CGD1]
Length=160
Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/140 (48%), Positives = 88/140 (63%), Gaps = 0/140 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF G RRF LG+ R L+ RL LV+ G+ + Y
Sbjct 12 SVARTLAVLGDRWTMLILRNAFLGCRRFDAFQAQLGLTRHVLADRLTRLVDEGVLAKRAY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE GRDL+ ++ L+ WGD + GPP++LRH CG+ +C+
Sbjct 72 QERPPRFEYRLTEKGRDLYPTLLALLAWGDRWKDDGHGPPLQLRHRRCGQLMHAVAVCSA 131
Query 134 CGEEITARNVTPEPGPGFKA 153
CGE + R+VTPEPGPG+ A
Sbjct 132 CGEPLDPRDVTPEPGPGWGA 151
>gi|294341299|emb|CAZ89713.1| putative Transcriptional regulator [Thiomonas sp. 3As]
Length=148
Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/145 (48%), Positives = 90/145 (63%), Gaps = 0/145 (0%)
Query 13 ESVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVP 72
+S+ R L VG+ WT LILREAFFGVRRF Q L L+ RL+ LV GL R
Sbjct 2 DSIERVLSQVGDAWTFLILREAFFGVRRFDQFQTTLAAAPNILTDRLKKLVANGLLQRHQ 61
Query 73 YSSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICT 132
Y P R EY LTE G DL+ AIV+LM+WGD +L +GPP+ L H CG+ + P L+C
Sbjct 62 YLERPPRFEYGLTEKGVDLYPAIVLLMRWGDRWLDEDKGPPLVLMHRPCGKVSQPVLVCD 121
Query 133 HCGEEITARNVTPEPGPGFKAKLAS 157
C E I AR++ +PGPG + +++
Sbjct 122 QCAEPINARDMDWKPGPGAEPSVSA 146
>gi|300789468|ref|YP_003769759.1| HxlR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|299798982|gb|ADJ49357.1| HxlR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|340531122|gb|AEK46327.1| HxlR family transcriptional regulator [Amycolatopsis mediterranei
S699]
Length=167
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/144 (44%), Positives = 93/144 (65%), Gaps = 0/144 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R ++L+G+ WT L+LR+AF+GVRRF + + LGI R TL+ RL+ LV+ GL ++VPY
Sbjct 12 SIARTMDLLGDWWTPLVLRDAFYGVRRFDEFQQALGIARNTLADRLKRLVDEGLLEKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
++P RH+Y LTE GRD + ++ + +WGD++L GPPI + H CG ++C
Sbjct 72 QTEPVRHDYVLTEKGRDFYPVLLAMTRWGDKWLAGEAGPPITVHHLACGHDTHAEIVCAE 131
Query 134 CGEEITARNVTPEPGPGFKAKLAS 157
C E +T + GPGF +LA
Sbjct 132 CREPMTPDDTRMRRGPGFPPRLAQ 155
>gi|115351535|ref|YP_773374.1| HxlR family transcriptional regulator [Burkholderia ambifaria
AMMD]
gi|115281523|gb|ABI87040.1| transcriptional regulator, HxlR family [Burkholderia ambifaria
AMMD]
Length=160
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/144 (47%), Positives = 90/144 (63%), Gaps = 0/144 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF G RRF LG+ R L+ RL LV+ G+ + Y
Sbjct 12 SVARTLAVLGDRWTMLILRNAFLGCRRFDAFQTQLGLTRHVLAERLARLVDEGVLVKRAY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G DL+ A++ LM WGD + +GPP++LRH CG+ +C+
Sbjct 72 QERPPRFEYRLTEKGLDLYPALLALMTWGDRWKDDGQGPPLQLRHRNCGQLMHAVAVCSA 131
Query 134 CGEEITARNVTPEPGPGFKAKLAS 157
CGE + A +V PEPGPG+ A A+
Sbjct 132 CGEPLDAHDVQPEPGPGWVAPEAA 155
>gi|16124898|ref|NP_419462.1| hypothetical protein CC_0645 [Caulobacter crescentus CB15]
gi|221233619|ref|YP_002516055.1| MarR family transcriptional regulator [Caulobacter crescentus
NA1000]
gi|13421858|gb|AAK22630.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220962791|gb|ACL94147.1| transcriptional regulator, MarR family [Caulobacter crescentus
NA1000]
Length=188
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/140 (48%), Positives = 87/140 (63%), Gaps = 0/140 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ RAL ++G+RWTL+ILR+ F GVRRF + LG+ R ++ RLR LVE G+ RVPY
Sbjct 48 SISRALAVIGDRWTLMILRDCFLGVRRFELFQKRLGVSRTIVTDRLRTLVEAGVLRRVPY 107
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P RHEYRLTE G DL ++ + +GD + EGPP+ RH CG P +C+
Sbjct 108 QDHPVRHEYRLTEKGLDLHPVVMAIAHFGDIHYAGAEGPPVLRRHKGCGCDFHPVQVCSE 167
Query 134 CGEEITARNVTPEPGPGFKA 153
CGE ++AR V G GF A
Sbjct 168 CGEPVSARQVEARAGAGFPA 187
>gi|167586191|ref|ZP_02378579.1| transcriptional regulator, HxlR family protein [Burkholderia
ubonensis Bu]
Length=161
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/140 (48%), Positives = 88/140 (63%), Gaps = 0/140 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF G RRF LG+ R L+ RL LV+ G+ + Y
Sbjct 12 SVARTLAVLGDRWTMLILRNAFLGCRRFDAFQAQLGLTRHVLAERLARLVDDGVLVKRAY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE GRDL+ A++ LM WGD + GPP++LRH TCG+ +C+
Sbjct 72 QERPPRFEYRLTEKGRDLYPALLALMAWGDRWKDDGAGPPLQLRHRTCGQLMHAVAVCSA 131
Query 134 CGEEITARNVTPEPGPGFKA 153
CGE + R+V PE GPG+ A
Sbjct 132 CGEPLDPRDVQPEAGPGWVA 151
>gi|238027480|ref|YP_002911711.1| transcriptional regulator family [Burkholderia glumae BGR1]
gi|237876674|gb|ACR29007.1| Transcriptional regulator family [Burkholderia glumae BGR1]
Length=158
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/144 (46%), Positives = 89/144 (62%), Gaps = 0/144 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R L ++G+RWT+LILR AF+GVRRF LG+ R L+ RL LVE G+F R Y
Sbjct 12 SIARTLAVLGDRWTMLILRNAFYGVRRFDAFQAQLGLTRHVLADRLARLVEEGVFVRRQY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P RHEYRL++ GRDL+ ++ L WGD + GPP+ +RH CG P ++C+
Sbjct 72 QERPPRHEYRLSDKGRDLYPVLLALTAWGDRWKDEGAGPPVLIRHKHCGALLRPLMVCSE 131
Query 134 CGEEITARNVTPEPGPGFKAKLAS 157
CGE + R++ PGPG K K A
Sbjct 132 CGEPLDPRDIELLPGPGTKPKAAG 155
>gi|83643731|ref|YP_432166.1| transcriptional regulator [Hahella chejuensis KCTC 2396]
gi|83631774|gb|ABC27741.1| predicted transcriptional regulator [Hahella chejuensis KCTC
2396]
Length=158
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/145 (45%), Positives = 88/145 (61%), Gaps = 0/145 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R L ++G+RWTLL++REAF GVRRF Q + L I R LS RL LVE G+ + Y
Sbjct 12 SIARTLSVIGDRWTLLVIREAFLGVRRFEQFQKRLQITRHRLSDRLNKLVESGVLRKALY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R+EYRLT G DL+ I+ + WGD+Y+ GPP++ H CG+ L C+
Sbjct 72 QGSPARYEYRLTRKGMDLYPVILAMAGWGDKYMAGDAGPPVEYVHLGCGKKMTATLTCSE 131
Query 134 CGEEITARNVTPEPGPGFKAKLASS 158
CGE + A++V P G G +A S+
Sbjct 132 CGEPVDAKSVKPMLGSGLRALTKSA 156
>gi|149376500|ref|ZP_01894261.1| putative transcriptional regulator [Marinobacter algicola DG893]
gi|149359167|gb|EDM47630.1| putative transcriptional regulator [Marinobacter algicola DG893]
Length=167
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/138 (50%), Positives = 85/138 (62%), Gaps = 0/138 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV RAL +VG+RWTL+ILR+ F GVRRF Q LGI R L+ RL+ LVE + +VPY
Sbjct 12 SVARALAVVGDRWTLIILRDCFLGVRRFDQFESRLGITRHVLTDRLKKLVENDVLTKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R EYRLTE G L I+ L+ WG+ Y+ G P+ H TCG P C+
Sbjct 72 QEKPLREEYRLTEKGLALHPVIMSLVHWGNTYMTDERGVPLVHIHKTCGHRMAPVTTCSK 131
Query 134 CGEEITARNVTPEPGPGF 151
CGEE+TAR+V E GP +
Sbjct 132 CGEEVTARDVRVEVGPNW 149
>gi|333912908|ref|YP_004486640.1| HxlR family transcriptional regulator [Delftia sp. Cs1-4]
gi|333743108|gb|AEF88285.1| transcriptional regulator, HxlR family [Delftia sp. Cs1-4]
Length=149
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/137 (47%), Positives = 87/137 (64%), Gaps = 0/137 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
S+ R + ++G+RWTLL+LR+ F GVRRF + LGI RP LS RL LVE G+ ++V Y
Sbjct 12 SIARTVSVIGDRWTLLVLRDCFLGVRRFDEFLGRLGISRPMLSDRLARLVEAGVLNKVAY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P RHEYRLT G DL ++ ++ WGD ++ EG P+ RH CG DP ++C+
Sbjct 72 QEAPVRHEYRLTPKGLDLHPVVMAIVHWGDVHMSGEEGRPLLHRHTVCGHTFDPLVVCSE 131
Query 134 CGEEITARNVTPEPGPG 150
C + AR+V EPGPG
Sbjct 132 CHAPLHARDVAVEPGPG 148
>gi|288916425|ref|ZP_06410803.1| transcriptional regulator, HxlR family [Frankia sp. EUN1f]
gi|288352196|gb|EFC86395.1| transcriptional regulator, HxlR family [Frankia sp. EUN1f]
Length=173
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/145 (46%), Positives = 92/145 (64%), Gaps = 1/145 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV + LE++GE WT+LI+R+AF GV RF ++ R LGI R L+ RL LVE G+ RVPY
Sbjct 12 SVAQCLEVIGEWWTMLIVRDAFLGVTRFDEIQRRLGISRNVLNQRLAGLVEAGVLTRVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R++YRLT+ GR L+ + + +WGD Y P+GPP++LRH CGE L C+
Sbjct 72 QDHPVRYDYRLTDKGRALWPVLTAMREWGDRYAA-PDGPPLQLRHTGCGEIMHTALTCSQ 130
Query 134 CGEEITARNVTPEPGPGFKAKLASS 158
CGE + R++ GPG + +S
Sbjct 131 CGEPVGPRDLRAVAGPGDHDGIIAS 155
>gi|119505383|ref|ZP_01627457.1| hypothetical protein MGP2080_14244 [marine gamma proteobacterium
HTCC2080]
gi|119458838|gb|EAW39939.1| hypothetical protein MGP2080_14244 [marine gamma proteobacterium
HTCC2080]
Length=186
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/144 (47%), Positives = 88/144 (62%), Gaps = 0/144 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV RAL +VGERWTLLI+R+AF G RRF + RNLG+ R L+ RL LV+ G+ RVPY
Sbjct 12 SVARALSIVGERWTLLIIRDAFKGTRRFDEFYRNLGVTRHRLAERLAGLVDAGVMTRVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
P R+EYRLT G L+ ++ L WGD +L + +GPP + H CG A P L C+
Sbjct 72 CDRPVRYEYRLTRMGLGLYPVLMTLGNWGDAWLDKGQGPPTEYWHAGCGNLAKPVLSCSE 131
Query 134 CGEEITARNVTPEPGPGFKAKLAS 157
CGE + V+ GP + + S
Sbjct 132 CGESLRPEEVSARSGPIMQTFIES 155
>gi|262372684|ref|ZP_06065963.1| transcriptional regulator [Acinetobacter junii SH205]
gi|262312709|gb|EEY93794.1| transcriptional regulator [Acinetobacter junii SH205]
Length=160
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/140 (45%), Positives = 91/140 (65%), Gaps = 0/140 (0%)
Query 14 SVGRALELVGERWTLLILREAFFGVRRFGQLARNLGIPRPTLSSRLRMLVEVGLFDRVPY 73
SV R L ++G+RWT+LILR AF G+RRF R+LG+ R LS RL+ LVE + +VPY
Sbjct 12 SVARTLSVLGDRWTMLILRNAFMGIRRFDDFQRSLGLTRHVLSERLKRLVEHEILVKVPY 71
Query 74 SSDPERHEYRLTEAGRDLFAAIVVLMQWGDEYLPRPEGPPIKLRHHTCGEHADPRLICTH 133
ER EY+LTE G DL+ I+ ++QW D+++ + G PI+ H +CG+ P+++C+
Sbjct 72 IERQERFEYQLTEKGLDLYPIILSMVQWADKWMDKGLGKPIEFTHKSCGKKISPKVVCSE 131
Query 134 CGEEITARNVTPEPGPGFKA 153
C E I ++V GPG+ A
Sbjct 132 CEEPIHVKDVRVAAGPGYFA 151
Lambda K H
0.323 0.141 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128907826664
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40