BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3104c

Length=308
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610241|ref|NP_217620.1|  transmembrane protein [Mycobacteriu...   610    6e-173
gi|15842675|ref|NP_337712.1|  hypothetical protein MT3187 [Mycoba...   609    1e-172
gi|308375988|ref|ZP_07668162.1|  conserved membrane protein [Myco...   535    4e-150
gi|183981543|ref|YP_001849834.1|  transmembrane protein [Mycobact...   523    1e-146
gi|118617903|ref|YP_906235.1|  transmembrane protein [Mycobacteri...   503    1e-140
gi|240168636|ref|ZP_04747295.1|  hypothetical protein MkanA1_0494...   478    5e-133
gi|342861024|ref|ZP_08717673.1|  MscS mechanosensitive ion channe...   435    4e-120
gi|41409272|ref|NP_962108.1|  hypothetical protein MAP3174c [Myco...   434    9e-120
gi|254820378|ref|ZP_05225379.1|  hypothetical protein MintA_10636...   432    2e-119
gi|296169216|ref|ZP_06850869.1|  small conductance mechanosensiti...   432    4e-119
gi|336459372|gb|EGO38315.1|  small-conductance mechanosensitive c...   432    5e-119
gi|254776428|ref|ZP_05217944.1|  hypothetical protein MaviaA2_174...   431    5e-119
gi|126434178|ref|YP_001069869.1|  mechanosensitive ion channel Ms...   415    4e-114
gi|108798579|ref|YP_638776.1|  mechanosensitive ion channel MscS ...   415    5e-114
gi|333991484|ref|YP_004524098.1|  transmembrane protein [Mycobact...   412    5e-113
gi|120402909|ref|YP_952738.1|  mechanosensitive ion channel prote...   398    7e-109
gi|145225029|ref|YP_001135707.1|  mechanosensitive ion channel Ms...   395    5e-108
gi|315445398|ref|YP_004078277.1|  small-conductance mechanosensit...   394    1e-107
gi|118466985|ref|YP_883158.1|  transporter, small conductance mec...   389    3e-106
gi|118473758|ref|YP_886447.1|  transporter small conductance mech...   379    3e-103
gi|169630558|ref|YP_001704207.1|  mechanosensitive ion channel Ms...   363    2e-98 
gi|226305795|ref|YP_002765755.1|  MscS family protein [Rhodococcu...   343    3e-92 
gi|312140590|ref|YP_004007926.1|  mechanosensitive ion channel [R...   341    7e-92 
gi|229490967|ref|ZP_04384800.1|  MscS Mechanosensitive ion channe...   341    9e-92 
gi|111023367|ref|YP_706339.1|  hypothetical protein RHA1_ro06405 ...   331    1e-88 
gi|296140714|ref|YP_003647957.1|  mechanosensitive ion channel Ms...   330    2e-88 
gi|54026460|ref|YP_120702.1|  putative transporter [Nocardia farc...   321    1e-85 
gi|339295940|gb|AEJ48051.1|  hypothetical protein CCDC5079_2861 [...   314    1e-83 
gi|120401156|ref|YP_950985.1|  mechanosensitive ion channel prote...   309    4e-82 
gi|158318417|ref|YP_001510925.1|  mechanosensitive ion channel Ms...   303    2e-80 
gi|284993248|ref|YP_003411803.1|  mechanosensitive ion channel Ms...   296    2e-78 
gi|288924090|ref|ZP_06418144.1|  MscS Mechanosensitive ion channe...   295    6e-78 
gi|111224900|ref|YP_715694.1|  hypothetical protein FRAAL5535 [Fr...   288    6e-76 
gi|343924878|ref|ZP_08764415.1|  putative MscS family protein [Go...   285    9e-75 
gi|262203334|ref|YP_003274542.1|  mechanosensitive ion channel pr...   280    2e-73 
gi|326383345|ref|ZP_08205033.1|  MscS mechanosensitive ion channe...   259    3e-67 
gi|296392774|ref|YP_003657658.1|  mechanosensitive ion channel pr...   258    9e-67 
gi|317507692|ref|ZP_07965399.1|  mechanosensitive ion channel [Se...   254    1e-65 
gi|339295939|gb|AEJ48050.1|  transmembrane protein [Mycobacterium...   248    8e-64 
gi|319951471|ref|ZP_08025280.1|  MscS mechanosensitive ion channe...   236    3e-60 
gi|295396667|ref|ZP_06806814.1|  small conductance mechanosensiti...   172    8e-41 
gi|326333761|ref|ZP_08199994.1|  transporter, small conductance m...   160    3e-37 
gi|311743075|ref|ZP_07716883.1|  mechanosensitive ion channel fam...   158    8e-37 
gi|269125584|ref|YP_003298954.1|  mechanosensitive ion channel Ms...   157    2e-36 
gi|332669909|ref|YP_004452917.1|  mechanosensitive ion channel Ms...   155    5e-36 
gi|302529049|ref|ZP_07281391.1|  MscS mechanosensitive ion channe...   155    7e-36 
gi|271968587|ref|YP_003342783.1|  mechanosensitive ion channel [S...   152    5e-35 
gi|134097919|ref|YP_001103580.1|  MscS mechanosensitive ion chann...   152    6e-35 
gi|84494314|ref|ZP_00993433.1|  small-conductance mechanosensitiv...   151    1e-34 
gi|269929422|ref|YP_003321743.1|  MscS Mechanosensitive ion chann...   149    4e-34 


>gi|15610241|ref|NP_217620.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
 gi|31794283|ref|NP_856776.1| transmembrane protein [Mycobacterium bovis AF2122/97]
 gi|121638989|ref|YP_979213.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 72 more sequence titles
 Length=308

 Score =  610 bits (1574),  Expect = 6e-173, Method: Compositional matrix adjust.
 Identities = 308/308 (100%), Positives = 308/308 (100%), Gaps = 0/308 (0%)

Query  1    MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL  60
            MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL
Sbjct  1    MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL  60

Query  61   DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL  120
            DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL
Sbjct  61   DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL  120

Query  121  GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS  180
            GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS
Sbjct  121  GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS  180

Query  181  SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE  240
            SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE
Sbjct  181  SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE  240

Query  241  LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA  300
            LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA
Sbjct  241  LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA  300

Query  301  AVAESPEQ  308
            AVAESPEQ
Sbjct  301  AVAESPEQ  308


>gi|15842675|ref|NP_337712.1| hypothetical protein MT3187 [Mycobacterium tuberculosis CDC1551]
 gi|13882994|gb|AAK47526.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|323718335|gb|EGB27513.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
Length=308

 Score =  609 bits (1571),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 307/308 (99%), Positives = 308/308 (100%), Gaps = 0/308 (0%)

Query  1    MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL  60
            MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL
Sbjct  1    MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL  60

Query  61   DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL  120
            DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL
Sbjct  61   DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL  120

Query  121  GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS  180
            GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS
Sbjct  121  GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS  180

Query  181  SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE  240
            SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE
Sbjct  181  SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE  240

Query  241  LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA  300
            LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFE+GRQLRVLVIRALTRAGIVTAADARA
Sbjct  241  LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFESGRQLRVLVIRALTRAGIVTAADARA  300

Query  301  AVAESPEQ  308
            AVAESPEQ
Sbjct  301  AVAESPEQ  308


>gi|308375988|ref|ZP_07668162.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|308377221|ref|ZP_07668461.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|308344661|gb|EFP33512.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|308348611|gb|EFP37462.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
Length=272

 Score =  535 bits (1377),  Expect = 4e-150, Method: Compositional matrix adjust.
 Identities = 272/272 (100%), Positives = 272/272 (100%), Gaps = 0/272 (0%)

Query  37   MLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYV  96
            MLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYV
Sbjct  1    MLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYV  60

Query  97   VVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELS  156
            VVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELS
Sbjct  61   VVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELS  120

Query  157  MVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSA  216
            MVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSA
Sbjct  121  MVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSA  180

Query  217  DLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAG  276
            DLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAG
Sbjct  181  DLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAG  240

Query  277  RQLRVLVIRALTRAGIVTAADARAAVAESPEQ  308
            RQLRVLVIRALTRAGIVTAADARAAVAESPEQ
Sbjct  241  RQLRVLVIRALTRAGIVTAADARAAVAESPEQ  272


>gi|183981543|ref|YP_001849834.1| transmembrane protein [Mycobacterium marinum M]
 gi|183174869|gb|ACC39979.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=328

 Score =  523 bits (1347),  Expect = 1e-146, Method: Compositional matrix adjust.
 Identities = 256/305 (84%), Positives = 287/305 (95%), Gaps = 3/305 (0%)

Query  1    MTTSGTVLAT---SIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVT  57
            MTT+ T  A    S AQ+WH+FWRG+IG+WI+ RGLRIVM+LIAAVLAARFVTW+A RVT
Sbjct  1    MTTNTTAFALATFSPAQYWHDFWRGQIGEWIITRGLRIVMVLIAAVLAARFVTWVAKRVT  60

Query  58   RRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPA  117
            +RLDLGFTESDALVRSE +KHRQAVASVISWVSIVLIYV+V+YE++D+LP PVG+LVGPA
Sbjct  61   QRLDLGFTESDALVRSEVSKHRQAVASVISWVSIVLIYVIVLYEIVDILPFPVGSLVGPA  120

Query  118  AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTK  177
            AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVE+VTLRVTK
Sbjct  121  AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEEVTLRVTK  180

Query  178  LRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSL  237
            LRSS+GEV+TVPNGNIVKS+NLSKDWARAV+DIPVPT ADL RVNEVLH+EC+HAR D++
Sbjct  181  LRSSDGEVYTVPNGNIVKSINLSKDWARAVIDIPVPTGADLNRVNEVLHRECQHAREDAI  240

Query  238  LGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD  297
            LG+LLLDEPTVMGVE++E+DTVTLRLVARTLPGKQF AGRQLRVLVIRALT AGI+T AD
Sbjct  241  LGDLLLDEPTVMGVEKLEMDTVTLRLVARTLPGKQFAAGRQLRVLVIRALTGAGIITPAD  300

Query  298  ARAAV  302
            A+AAV
Sbjct  301  AQAAV  305


>gi|118617903|ref|YP_906235.1| transmembrane protein [Mycobacterium ulcerans Agy99]
 gi|118570013|gb|ABL04764.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99]
Length=328

 Score =  503 bits (1296),  Expect = 1e-140, Method: Compositional matrix adjust.
 Identities = 255/305 (84%), Positives = 287/305 (95%), Gaps = 3/305 (0%)

Query  1    MTTSGTVLAT---SIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVT  57
            MTT+ T  A    S AQ+WH+FWRG+IG+WI+ RGLRIVM+LIAAVLAARFVTW+A RVT
Sbjct  1    MTTNTTAFALATFSPAQYWHDFWRGQIGEWIITRGLRIVMVLIAAVLAARFVTWVAKRVT  60

Query  58   RRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPA  117
            +RLDLGFTESDALVRSE +KHRQAVASVISWVSIV+IYV+V+YE++D+LP PVG+LVGPA
Sbjct  61   QRLDLGFTESDALVRSEVSKHRQAVASVISWVSIVVIYVIVLYEIVDILPFPVGSLVGPA  120

Query  118  AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTK  177
            AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVE+VTLRVTK
Sbjct  121  AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEEVTLRVTK  180

Query  178  LRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSL  237
            LRSS+GEV+TVPNGNIVKS+NLSKDWARAV+DIPVPT ADL RVNEVLH+EC+HAR D++
Sbjct  181  LRSSDGEVYTVPNGNIVKSINLSKDWARAVIDIPVPTGADLNRVNEVLHRECQHAREDAI  240

Query  238  LGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD  297
            LG+LLLDEPTVMGVE++E+DTVTLRLVARTLPGKQF AGRQLRVLVIRALT AGI+T AD
Sbjct  241  LGDLLLDEPTVMGVEKLEMDTVTLRLVARTLPGKQFAAGRQLRVLVIRALTGAGIITPAD  300

Query  298  ARAAV  302
            A+AAV
Sbjct  301  AQAAV  305


>gi|240168636|ref|ZP_04747295.1| hypothetical protein MkanA1_04945 [Mycobacterium kansasii ATCC 
12478]
Length=316

 Score =  478 bits (1230),  Expect = 5e-133, Method: Compositional matrix adjust.
 Identities = 237/293 (81%), Positives = 265/293 (91%), Gaps = 0/293 (0%)

Query  12   IAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALV  71
            +AQ WH+FWRG IG+WI+ RGLR+VMLLIAAVLAARFV+W+A RVTRRLDLGF ESDALV
Sbjct  1    MAQRWHDFWRGHIGEWIITRGLRVVMLLIAAVLAARFVSWVAQRVTRRLDLGFAESDALV  60

Query  72   RSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRL  131
            RSEATKHRQAVASVISWVSIVLI +VVV ++ DVL   VG LV PA V+GAALGFGAQ+L
Sbjct  61   RSEATKHRQAVASVISWVSIVLIGIVVVMQIADVLQFSVGGLVAPATVVGAALGFGAQQL  120

Query  132  VQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNG  191
            V+DLLAGFFIIVE+QYGFGDLV+L+++GS  +A GTVE+VTLRVT+LRS++GEVFTVPNG
Sbjct  121  VRDLLAGFFIIVERQYGFGDLVKLTIMGSATDATGTVENVTLRVTRLRSADGEVFTVPNG  180

Query  192  NIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGV  251
             IVKSVNLSKDWARAVVDIPV T+ADL RVNEVLHQECEHAR D++LGELLLD PTVMGV
Sbjct  181  QIVKSVNLSKDWARAVVDIPVSTNADLNRVNEVLHQECEHARDDAVLGELLLDSPTVMGV  240

Query  252  ERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE  304
            E IE+DTVTLRLVARTLPGKQFEAGRQLRVLVIRAL RAGIVTAADA   + E
Sbjct  241  ESIELDTVTLRLVARTLPGKQFEAGRQLRVLVIRALARAGIVTAADATVGLVE  293


>gi|342861024|ref|ZP_08717673.1| MscS mechanosensitive ion channel [Mycobacterium colombiense 
CECT 3035]
 gi|342131468|gb|EGT84738.1| MscS mechanosensitive ion channel [Mycobacterium colombiense 
CECT 3035]
Length=317

 Score =  435 bits (1118),  Expect = 4e-120, Method: Compositional matrix adjust.
 Identities = 216/295 (74%), Positives = 253/295 (86%), Gaps = 1/295 (0%)

Query  12   IAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALV  71
            +   WH+FWRGE+G+WI+ RGLRIVM+LIAAVLAARFV W+A +VT +L+LGF ESDALV
Sbjct  1    MTHRWHDFWRGELGEWIITRGLRIVMILIAAVLAARFVNWVAQQVTHQLNLGFAESDALV  60

Query  72   RSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRL  131
            RSEA+KHRQA+ASVISWVS+V+I + V+ ++  VL   VG LV PA V+GAALGFGAQ+L
Sbjct  61   RSEASKHRQALASVISWVSVVIIGIWVIMQISSVLQFSVGGLVAPATVVGAALGFGAQQL  120

Query  132  VQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNG  191
            V+DLLAGFFI+VE+QYGFGDLV +++V + E A+GTVE+VTLRVT+LRS++GEV T+PNG
Sbjct  121  VRDLLAGFFILVERQYGFGDLVTITVVSATE-ASGTVENVTLRVTRLRSADGEVLTIPNG  179

Query  192  NIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGV  251
             IVK VNLSKDWARAVVDIPV TSADL RVNEVLHQEC+ A  + +LGELLLD PTVMGV
Sbjct  180  QIVKVVNLSKDWARAVVDIPVSTSADLNRVNEVLHQECDRAMDNPVLGELLLDAPTVMGV  239

Query  252  ERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESP  306
            E I VDTVTLRLVARTLPGKQFE GRQLRVLVIRAL R GIVTAADAR  + E P
Sbjct  240  ESIAVDTVTLRLVARTLPGKQFEVGRQLRVLVIRALARVGIVTAADARVGLVEDP  294


>gi|41409272|ref|NP_962108.1| hypothetical protein MAP3174c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398092|gb|AAS05722.1| hypothetical protein MAP_3174c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=331

 Score =  434 bits (1116),  Expect = 9e-120, Method: Compositional matrix adjust.
 Identities = 220/307 (72%), Positives = 259/307 (85%), Gaps = 4/307 (1%)

Query  1    MTTSGTVLA---TSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVT  57
            MT + +VLA   T+ A  WH+FWRGE+G+WI+ RGLRIVM+LIAAVLAARFV W+A +V+
Sbjct  1    MTNNTSVLAGAMTTAAHRWHDFWRGELGEWIITRGLRIVMVLIAAVLAARFVNWVALQVS  60

Query  58   RRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPA  117
            R+   GF ESDALVRSEA+KHRQAVASVISWVS+V+I + V+ ++  +L   VG LV PA
Sbjct  61   RQPTTGFVESDALVRSEASKHRQAVASVISWVSVVIIGIWVMLQIASILQFSVGGLVAPA  120

Query  118  AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTK  177
             V+GAALGFGAQ+LV+DLL+GFFI+ E+QYGFGDLV L++V + E A+GTVE+VTLRVT+
Sbjct  121  TVVGAALGFGAQQLVKDLLSGFFILAERQYGFGDLVTLTVVAATE-ASGTVENVTLRVTR  179

Query  178  LRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSL  237
            LRS +GEV T+PNG IVK VNLSKDWARAVVDIPV TSADL RVNEVLHQEC+ A  + +
Sbjct  180  LRSPDGEVLTIPNGQIVKVVNLSKDWARAVVDIPVSTSADLNRVNEVLHQECDRAMDNPV  239

Query  238  LGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD  297
            LG+LLLD PTVMGVE IEVDTVTLRLVARTLPGKQFE GRQLRVLVIRAL RAGIVTAAD
Sbjct  240  LGQLLLDSPTVMGVESIEVDTVTLRLVARTLPGKQFEVGRQLRVLVIRALARAGIVTAAD  299

Query  298  ARAAVAE  304
            AR  + E
Sbjct  300  ARVGLVE  306


>gi|254820378|ref|ZP_05225379.1| hypothetical protein MintA_10636 [Mycobacterium intracellulare 
ATCC 13950]
Length=314

 Score =  432 bits (1112),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 216/288 (75%), Positives = 250/288 (87%), Gaps = 1/288 (0%)

Query  12   IAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALV  71
            +   WH+FWRGEIG+WI+ RGLRI M+LIAAVLAARFV W+A +VTR+L+LGF ESDALV
Sbjct  1    MTHRWHDFWRGEIGEWIITRGLRIAMVLIAAVLAARFVNWVAQQVTRQLNLGFAESDALV  60

Query  72   RSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRL  131
            RSEA+KHRQAVASVISWVS+V+I + V+ ++ DVL   VG LV PA V+GAALGFGAQ+L
Sbjct  61   RSEASKHRQAVASVISWVSVVIIGIWVMLQIADVLQFSVGGLVAPATVVGAALGFGAQQL  120

Query  132  VQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNG  191
            V+DLL+GFFI+VE+QYGFGDLV L++V + E A+GTVE+VTLRVT+LRS +GEV T+PNG
Sbjct  121  VRDLLSGFFILVERQYGFGDLVTLTVVAATE-ASGTVENVTLRVTRLRSPDGEVLTIPNG  179

Query  192  NIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGV  251
             IVK VNLSKDWARAVVDIPV TSADL RVNEVLHQEC+ A  + +LG LLLD PTVMGV
Sbjct  180  QIVKVVNLSKDWARAVVDIPVSTSADLNRVNEVLHQECDRAMDNPVLGALLLDAPTVMGV  239

Query  252  ERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADAR  299
            E IEVDTVTLR+VARTLPGKQFE GRQLRVLVIRAL R GIVTAADAR
Sbjct  240  ESIEVDTVTLRMVARTLPGKQFEVGRQLRVLVIRALARVGIVTAADAR  287


>gi|296169216|ref|ZP_06850869.1| small conductance mechanosensitive ion channel family transporter 
[Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295896114|gb|EFG75781.1| small conductance mechanosensitive ion channel family transporter 
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length=331

 Score =  432 bits (1110),  Expect = 4e-119, Method: Compositional matrix adjust.
 Identities = 220/309 (72%), Positives = 257/309 (84%), Gaps = 4/309 (1%)

Query  1    MTTSGTVLATSI---AQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVT  57
            MT + T+LA+     A  WH FWRGEIG WI+ RGLRI M+LIAAVLAARFV W+A +VT
Sbjct  1    MTANTTLLASPATINALGWHAFWRGEIGQWIITRGLRIAMVLIAAVLAARFVNWVAQQVT  60

Query  58   RRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPA  117
            RR+ LGF  SDALV SEA+KHRQA+ASVISWVS+V+I + V+ ++ DVL   VG LV PA
Sbjct  61   RRVSLGFAASDALVPSEASKHRQALASVISWVSVVIIGIWVMMQIADVLQFSVGGLVAPA  120

Query  118  AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTK  177
             V+GAALGFGAQ+LV+DLL+GFFI+ E+QYGFGDLV L++V + E A+GTVE+VTLRVT+
Sbjct  121  TVVGAALGFGAQQLVKDLLSGFFILAERQYGFGDLVTLTVVAATE-ASGTVENVTLRVTR  179

Query  178  LRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSL  237
            LRS++GEV T+PNG IVK VNLSKDWARAVVDIPV TSADL RVNEVLHQEC+ A  + L
Sbjct  180  LRSADGEVLTIPNGQIVKVVNLSKDWARAVVDIPVSTSADLNRVNEVLHQECDRAMDNPL  239

Query  238  LGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD  297
            LG+LLLD PTVMGVE IE+DTVTLRLVARTLPGKQFEAGRQLRVLVIRAL R GIVT+AD
Sbjct  240  LGDLLLDAPTVMGVESIELDTVTLRLVARTLPGKQFEAGRQLRVLVIRALARVGIVTSAD  299

Query  298  ARAAVAESP  306
            A   + E P
Sbjct  300  ATVGLVEDP  308


>gi|336459372|gb|EGO38315.1| small-conductance mechanosensitive channel [Mycobacterium avium 
subsp. paratuberculosis S397]
Length=320

 Score =  432 bits (1110),  Expect = 5e-119, Method: Compositional matrix adjust.
 Identities = 215/295 (73%), Positives = 252/295 (86%), Gaps = 1/295 (0%)

Query  10   TSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDA  69
            T+ A  WH+FWRGE+G+WI+ RGLRIVM+LIAAVLAARFV W+A +V+R+L  GF ESDA
Sbjct  2    TTAAHRWHDFWRGELGEWIITRGLRIVMVLIAAVLAARFVNWVALQVSRQLTTGFVESDA  61

Query  70   LVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQ  129
            LVRSEA+KHRQAVASVISWVS+V+I + V+ ++  +L   VG L  PA V+GAALGFGAQ
Sbjct  62   LVRSEASKHRQAVASVISWVSVVIIGIWVMLQIASILQFSVGGLAAPATVVGAALGFGAQ  121

Query  130  RLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVP  189
            +LV+DLL+GFFI+ E+QYGFGDLV L++V + E A+GTVE+VTLRVT+LRS +GEV T+P
Sbjct  122  QLVKDLLSGFFILAERQYGFGDLVTLTVVAATE-ASGTVENVTLRVTRLRSPDGEVLTIP  180

Query  190  NGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVM  249
            NG IVK VNLSKDWARAVVDIPV TSADL RVNEVLHQEC+ A  + +LG+LLLD PTVM
Sbjct  181  NGQIVKVVNLSKDWARAVVDIPVSTSADLNRVNEVLHQECDRAMDNPVLGQLLLDSPTVM  240

Query  250  GVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE  304
            GVE IEVDTVTLRLVARTLPGKQFE GRQLRVLVIRAL RAGIVTAADAR  + E
Sbjct  241  GVESIEVDTVTLRLVARTLPGKQFEVGRQLRVLVIRALARAGIVTAADARVGLVE  295


>gi|254776428|ref|ZP_05217944.1| hypothetical protein MaviaA2_17414 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=324

 Score =  431 bits (1109),  Expect = 5e-119, Method: Compositional matrix adjust.
 Identities = 215/295 (73%), Positives = 253/295 (86%), Gaps = 1/295 (0%)

Query  10   TSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDA  69
            T+ A  WH+FWRGE+G+WI+ RGLRIVM+LIAAVLAARFV W+A +V+R+L  GF ESDA
Sbjct  2    TTAAHRWHDFWRGELGEWIITRGLRIVMVLIAAVLAARFVNWVALQVSRQLTTGFVESDA  61

Query  70   LVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQ  129
            LVRSEA+KHRQAVASVISWVS+V+I + V+ ++  +L   VG LV PA V+GAALGFGAQ
Sbjct  62   LVRSEASKHRQAVASVISWVSVVIIGIWVMLQIASILQFSVGGLVAPATVVGAALGFGAQ  121

Query  130  RLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVP  189
            +LV+DLL+GFFI+ E+QYGFGDLV L++V + E A+GTVE+VTLRVT+LRS +GEV T+P
Sbjct  122  QLVKDLLSGFFILAERQYGFGDLVTLTVVAATE-ASGTVENVTLRVTRLRSPDGEVLTIP  180

Query  190  NGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVM  249
            NG IVK VNLSKDWARAVVDIPV T+ADL RVNEVLHQEC+ A  + +LG+LLLD PTVM
Sbjct  181  NGQIVKVVNLSKDWARAVVDIPVSTTADLNRVNEVLHQECDRAMDNPVLGQLLLDSPTVM  240

Query  250  GVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE  304
            GVE IEVDTVTLRLVARTLPGKQFE GRQLRVLVIRAL RAGIVTAADAR  + E
Sbjct  241  GVESIEVDTVTLRLVARTLPGKQFEVGRQLRVLVIRALARAGIVTAADARVGLVE  295


>gi|126434178|ref|YP_001069869.1| mechanosensitive ion channel MscS [Mycobacterium sp. JLS]
 gi|126233978|gb|ABN97378.1| MscS Mechanosensitive ion channel [Mycobacterium sp. JLS]
Length=319

 Score =  415 bits (1067),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 209/313 (67%), Positives = 251/313 (81%), Gaps = 6/313 (1%)

Query  1    MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL  60
            MTTS T LA   A+ WH+FW G+IG W++ RGL+I +L+I A+L ARF+ W+A RVTRR+
Sbjct  1    MTTS-TTLAIGFAEGWHDFWHGDIGVWVMTRGLQIALLVIGALLGARFINWVARRVTRRI  59

Query  61   DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL  120
            D  + ESD LVRSE+ KHRQAVASVISWVSI +++VVV  ++  VL +PVG+LV PAAVL
Sbjct  60   DAEYQESDQLVRSESAKHRQAVASVISWVSIAVLFVVVGMQITAVLNIPVGSLVAPAAVL  119

Query  121  GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS  180
            GAALGFGAQ+LVQDLLAGFFII E+QYGFGDLV+L+M+G+ + A GTVE+VTLRVTKLR+
Sbjct  120  GAALGFGAQKLVQDLLAGFFIITERQYGFGDLVQLNMIGATDAAEGTVEEVTLRVTKLRT  179

Query  181  SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE  240
            SEGEVFTVPNGNIV+S+N+SKDWARAVVDIPVPT+ADL  VNE+LH+  E A  D  L  
Sbjct  180  SEGEVFTVPNGNIVRSLNMSKDWARAVVDIPVPTTADLNDVNELLHRVGEDAMDDVKLSA  239

Query  241  LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVT-----A  295
            LLLD P +MGVE IEVDTV LR+VARTLPGKQFE GR+LR+ +I ALTRAGI T      
Sbjct  240  LLLDTPQLMGVESIEVDTVNLRMVARTLPGKQFEVGRRLRIRIIAALTRAGIATKDHTPK  299

Query  296  ADARAAVAESPEQ  308
             D  A   E+P Q
Sbjct  300  VDTIAGHGEAPPQ  312


>gi|108798579|ref|YP_638776.1| mechanosensitive ion channel MscS [Mycobacterium sp. MCS]
 gi|119867679|ref|YP_937631.1| mechanosensitive ion channel MscS [Mycobacterium sp. KMS]
 gi|108768998|gb|ABG07720.1| MscS Mechanosensitive ion channel [Mycobacterium sp. MCS]
 gi|119693768|gb|ABL90841.1| MscS Mechanosensitive ion channel [Mycobacterium sp. KMS]
Length=319

 Score =  415 bits (1066),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 209/313 (67%), Positives = 251/313 (81%), Gaps = 6/313 (1%)

Query  1    MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL  60
            MTTS T LA   A+ WH+FW G+IG W++ RGL+I +L+I A+L ARF+ W+A RVTRR+
Sbjct  1    MTTS-TTLAIGFAEGWHDFWHGDIGVWVMTRGLQIALLVIGALLGARFINWVARRVTRRI  59

Query  61   DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL  120
            D  + ESD LVRSE+ KHRQAVASVISWVSI +++VVV  ++  VL +PVG+LV PAAVL
Sbjct  60   DAEYQESDQLVRSESAKHRQAVASVISWVSIAVLFVVVGMQITAVLNIPVGSLVAPAAVL  119

Query  121  GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS  180
            GAALGFGAQ+LVQDLLAGFFII E+QYGFGDLV+L+M+G+ + A GTVE+VTLRVTKLR+
Sbjct  120  GAALGFGAQKLVQDLLAGFFIITERQYGFGDLVQLNMIGATDAAEGTVEEVTLRVTKLRT  179

Query  181  SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE  240
            SEGEVFTVPNGNIV+S+N+SKDWARAVVDIPVPT+ADL  VNE+LH+  E A  D  L  
Sbjct  180  SEGEVFTVPNGNIVRSLNMSKDWARAVVDIPVPTTADLNDVNELLHRVGEDAMDDVKLSA  239

Query  241  LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVT-----A  295
            LLLD P +MGVE IEVDTV LR+VARTLPGKQFE GR+LR+ +I ALTRAGI T      
Sbjct  240  LLLDTPQLMGVESIEVDTVNLRMVARTLPGKQFEVGRRLRIRIIAALTRAGIATKDHTPK  299

Query  296  ADARAAVAESPEQ  308
             D  A   E+P Q
Sbjct  300  VDTIAGHGEAPPQ  312


>gi|333991484|ref|YP_004524098.1| transmembrane protein [Mycobacterium sp. JDM601]
 gi|333487452|gb|AEF36844.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=300

 Score =  412 bits (1058),  Expect = 5e-113, Method: Compositional matrix adjust.
 Identities = 209/301 (70%), Positives = 255/301 (85%), Gaps = 3/301 (0%)

Query  7    VLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTE  66
            VLA S  Q WH+ W GEIG W++++GLRIV+LLI AVLA+RF+TW A RVTRRL+LGF  
Sbjct  2    VLAFSPGQRWHDAWSGEIGQWVIDKGLRIVLLLIGAVLASRFITWAARRVTRRLELGFQT  61

Query  67   SDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGF  126
            SDALVRSEA+KHRQAVASVISWVS+V++ VVV  ++  +L +P+G+LVGPAAV+G A+GF
Sbjct  62   SDALVRSEASKHRQAVASVISWVSVVMLCVVVAVQITGILDIPIGSLVGPAAVIGGAIGF  121

Query  127  GAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVF  186
            GAQ+LVQDLL+GFFII E+QYGFGDLV+LSM+G+   A GTVEDVTLRVTKLR+++GEVF
Sbjct  122  GAQKLVQDLLSGFFIITERQYGFGDLVQLSMIGASVEALGTVEDVTLRVTKLRTADGEVF  181

Query  187  TVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARH-DSLLGELLLDE  245
            TVPNGNIV+S+NLSKDWARAVVDIPVPTSADL RVNEVLHQ CE+A   D+ L +LLLD 
Sbjct  182  TVPNGNIVRSLNLSKDWARAVVDIPVPTSADLNRVNEVLHQVCENAMEADAPLRDLLLDT  241

Query  246  PTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAES  305
            P++MGVE IE+  V LR+VARTLPGKQFE GR+LR+ V+RAL  AG+VTA + +    E+
Sbjct  242  PSIMGVESIELGVVNLRMVARTLPGKQFEVGRRLRIQVVRALASAGVVTAGEVQP--VET  299

Query  306  P  306
            P
Sbjct  300  P  300


>gi|120402909|ref|YP_952738.1| mechanosensitive ion channel protein MscS [Mycobacterium vanbaalenii 
PYR-1]
 gi|119955727|gb|ABM12732.1| MscS Mechanosensitive ion channel [Mycobacterium vanbaalenii 
PYR-1]
Length=325

 Score =  398 bits (1022),  Expect = 7e-109, Method: Compositional matrix adjust.
 Identities = 202/296 (69%), Positives = 242/296 (82%), Gaps = 0/296 (0%)

Query  3    TSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDL  62
            TS  +LA  +A  WH FWRG+IG WIL+RG+RI +LLI  +LAARF+ W A R+TRR+D 
Sbjct  2    TSNRLLAFDLASRWHGFWRGDIGVWILDRGVRIALLLIGGLLAARFINWAAQRITRRIDA  61

Query  63   GFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGA  122
             + ESD LVRSE+ KHRQAVASVISWVS+ L++V+V  ++ D+L +P+G+LV PAAV+GA
Sbjct  62   EYQESDQLVRSESAKHRQAVASVISWVSVALLFVMVAVQITDILAIPIGSLVAPAAVIGA  121

Query  123  ALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSE  182
            ALGFGAQRLVQDLL+GFFII EKQYGFGDLV L++ G    A GTVEDVTLRVTKLRS+E
Sbjct  122  ALGFGAQRLVQDLLSGFFIITEKQYGFGDLVALTVSGIAAPAEGTVEDVTLRVTKLRSAE  181

Query  183  GEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELL  242
            GE+FT+PNG IVK+VNLSKDWARAV+DIPVPTSADL  VN+VLH   + A  DS L +LL
Sbjct  182  GEMFTIPNGQIVKTVNLSKDWARAVIDIPVPTSADLNLVNDVLHDVAQKAIDDSQLHDLL  241

Query  243  LDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADA  298
            LD P +MGVE IE+DTV LR+VARTLPGKQFE GR+LRVLVIR L R+GIV   +A
Sbjct  242  LDPPQLMGVESIELDTVNLRMVARTLPGKQFEVGRRLRVLVIRELRRSGIVAPGEA  297


>gi|145225029|ref|YP_001135707.1| mechanosensitive ion channel MscS [Mycobacterium gilvum PYR-GCK]
 gi|145217515|gb|ABP46919.1| MscS Mechanosensitive ion channel [Mycobacterium gilvum PYR-GCK]
Length=334

 Score =  395 bits (1015),  Expect = 5e-108, Method: Compositional matrix adjust.
 Identities = 200/294 (69%), Positives = 242/294 (83%), Gaps = 0/294 (0%)

Query  1    MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL  60
            +T + TVLA  +A  W  FW+G+ G WIL RG+ I +LLI  +LAARF+ W A R+TRR+
Sbjct  10   ITLNTTVLAFDMAGAWRGFWQGDTGVWILGRGVPIALLLIGGLLAARFINWSARRITRRI  69

Query  61   DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL  120
            D  + ESD LVR+E+ KHRQAVASVISWVS+ L++V+V  ++ D+L +P+G+LV PAAV+
Sbjct  70   DAQYLESDQLVRTESAKHRQAVASVISWVSVALLFVMVAVQITDILAIPIGSLVAPAAVI  129

Query  121  GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS  180
            GAALGFGAQ+LVQDLLAGFFII E+QYGFGDLVEL+MVG+P+ A GTVE+VTLRVTKLR+
Sbjct  130  GAALGFGAQKLVQDLLAGFFIITERQYGFGDLVELNMVGAPQAAQGTVEEVTLRVTKLRT  189

Query  181  SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE  240
            SEGEVFTVPNGNIV+S+N+SKDWARAVVDIPVPT+ DL RVNEVLH+  E A  D  L  
Sbjct  190  SEGEVFTVPNGNIVQSLNMSKDWARAVVDIPVPTTVDLNRVNEVLHRVGETAMQDDELRA  249

Query  241  LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVT  294
            LLLD P +MGVE IEVDTV LR+VARTLPGKQFE GR+LR+L+I AL  AGI T
Sbjct  250  LLLDTPQLMGVESIEVDTVNLRMVARTLPGKQFEVGRRLRILIIAALAGAGIST  303


>gi|315445398|ref|YP_004078277.1| small-conductance mechanosensitive channel [Mycobacterium sp. 
Spyr1]
 gi|315263701|gb|ADU00443.1| small-conductance mechanosensitive channel [Mycobacterium sp. 
Spyr1]
Length=323

 Score =  394 bits (1011),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 199/289 (69%), Positives = 239/289 (83%), Gaps = 0/289 (0%)

Query  6    TVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFT  65
            TVLA  +A  W  FW+G+ G WIL RG+ I +LLI  +LAARF+ W A R+TRR+D  + 
Sbjct  4    TVLAFDMAGAWRGFWQGDTGVWILGRGVPIALLLIGGLLAARFINWSARRITRRIDAQYL  63

Query  66   ESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALG  125
            ESD LVR+E+ KHRQAVASVISWVS+ L++V+V  ++ D+L +P+G+LV PAAV+GAALG
Sbjct  64   ESDQLVRTESAKHRQAVASVISWVSVALLFVMVAVQITDILAIPIGSLVAPAAVIGAALG  123

Query  126  FGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEV  185
            FGAQ+LVQDLLAGFFII E+QYGFGDLVEL+MVG+P+ A GTVE+VTLRVTKLR+SEGEV
Sbjct  124  FGAQKLVQDLLAGFFIITERQYGFGDLVELNMVGAPQAAQGTVEEVTLRVTKLRTSEGEV  183

Query  186  FTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDE  245
            FTVPNGNIV+S+N+SKDWARAVVDIPVPT+ DL RVNEVLH+  E A  D  L  LLLD 
Sbjct  184  FTVPNGNIVQSLNMSKDWARAVVDIPVPTTVDLNRVNEVLHRVGETAMQDDELRALLLDT  243

Query  246  PTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVT  294
            P +MGVE IEVDTV LR+VARTLPGKQFE GR+LR+L+I AL  AGI T
Sbjct  244  PQLMGVESIEVDTVNLRMVARTLPGKQFEVGRRLRILIIAALAGAGIST  292


>gi|118466985|ref|YP_883158.1| transporter, small conductance mechanosensitive ion channel (MscS) 
family protein [Mycobacterium avium 104]
 gi|118168272|gb|ABK69169.1| transporter, small conductance mechanosensitive ion channel (MscS) 
family protein [Mycobacterium avium 104]
Length=292

 Score =  389 bits (999),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 198/268 (74%), Positives = 230/268 (86%), Gaps = 1/268 (0%)

Query  37   MLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYV  96
            M+LIAAVLAARFV W+A +V+R+L  GF ESDALVRSEA+KHRQAVASVISWVS+V+I +
Sbjct  1    MVLIAAVLAARFVNWVALQVSRQLTTGFVESDALVRSEASKHRQAVASVISWVSVVIIGI  60

Query  97   VVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELS  156
             V+ ++  +L   VG LV PA V+GAALGFGAQ+LV+DLL+GFFI+ E+QYGFGDLV L+
Sbjct  61   WVMLQIASILQFSVGGLVAPATVVGAALGFGAQQLVKDLLSGFFILAERQYGFGDLVTLT  120

Query  157  MVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSA  216
            +V + E A+GTVE+VTLRVT+LRS +GEV T+PNG IVK VNLSKDWARAVVDIPV TSA
Sbjct  121  VVAATE-ASGTVENVTLRVTRLRSPDGEVLTIPNGQIVKVVNLSKDWARAVVDIPVSTSA  179

Query  217  DLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAG  276
            DL RVNEVLHQEC+ A  + +LG+LLLD PTVMGVE IEVDTVTLRLVARTLPGKQFE G
Sbjct  180  DLNRVNEVLHQECDRAMDNPVLGQLLLDSPTVMGVESIEVDTVTLRLVARTLPGKQFEVG  239

Query  277  RQLRVLVIRALTRAGIVTAADARAAVAE  304
            RQLRVLVIRAL RAGIVTAADAR  + E
Sbjct  240  RQLRVLVIRALARAGIVTAADARVGLVE  267


>gi|118473758|ref|YP_886447.1| transporter small conductance mechanosensitive ion channel (MscS) 
family protein [Mycobacterium smegmatis str. MC2 155]
 gi|118175045|gb|ABK75941.1| transporter, small conductance mechanosensitive ion channel (MscS) 
family protein [Mycobacterium smegmatis str. MC2 155]
Length=326

 Score =  379 bits (974),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 207/302 (69%), Positives = 248/302 (83%), Gaps = 1/302 (0%)

Query  2    TTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLD  61
            +++ TVLA S+A  WH+FW GEIG WIL +GLRI +LLI  +LAARF++W A RV RR+D
Sbjct  5    SSAATVLAFSVADRWHDFWHGEIGVWILTKGLRIALLLIGGLLAARFISWAAQRVVRRID  64

Query  62   LGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLG  121
              + ESD LVRSE+ KHRQAVASVISWVS+ L++V+V+ EV DVL VPV +LV PAAVLG
Sbjct  65   AEYQESDQLVRSESAKHRQAVASVISWVSVALLFVIVLVEVTDVLAVPVASLVAPAAVLG  124

Query  122  AALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSS  181
            AALGFGAQR+VQDLLAGFFII EKQYGFGDLV L+ +G+   A GTVEDVTLRVTKLRS+
Sbjct  125  AALGFGAQRIVQDLLAGFFIITEKQYGFGDLVRLT-IGASNEAEGTVEDVTLRVTKLRST  183

Query  182  EGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGEL  241
            EGE++TVPNG IVKS+NLSKDWARAVVDIPV  S DL  VN+VL++  E A  D+ L +L
Sbjct  184  EGEMYTVPNGQIVKSLNLSKDWARAVVDIPVSVSVDLNVVNDVLNEVAERATEDAELSKL  243

Query  242  LLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAA  301
            +LD+P +MGVE I VDTV LR+VARTLPGKQFE GR+LRV V+RAL RAG+VT++DA  A
Sbjct  244  VLDKPQLMGVESIGVDTVNLRMVARTLPGKQFEVGRRLRVRVVRALRRAGVVTSSDASVA  303

Query  302  VA  303
             A
Sbjct  304  AA  305


>gi|169630558|ref|YP_001704207.1| mechanosensitive ion channel MscS [Mycobacterium abscessus ATCC 
19977]
 gi|169242525|emb|CAM63553.1| MscS Mechanosensitive ion channel [Mycobacterium abscessus]
Length=350

 Score =  363 bits (932),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 183/291 (63%), Positives = 229/291 (79%), Gaps = 0/291 (0%)

Query  12   IAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALV  71
            +A+ W++FW  +IG W+L+ GL+IV+ ++ A++  RF+ W A ++TRRLD  FT+SDALV
Sbjct  14   LAERWNSFWSSQIGRWLLDNGLQIVIAILGAMILVRFINWGAQKITRRLDRSFTQSDALV  73

Query  72   RSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRL  131
            RSEA+KHRQA+ASVISW+ +VL+ V+    V+ VL + VG L GPAAVLG ALGFGAQR+
Sbjct  74   RSEASKHRQALASVISWIIVVLVVVLTTVHVVGVLGISVGGLAGPAAVLGGALGFGAQRV  133

Query  132  VQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNG  191
            VQDLL+GFF+I EKQYGFGDLVEL + G    + GTVE+VTLRVTKLRS +GEV T+PNG
Sbjct  134  VQDLLSGFFLITEKQYGFGDLVELYVQGQTTESRGTVEEVTLRVTKLRSGDGEVITIPNG  193

Query  192  NIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGV  251
             IVK+VNLSKDWARAVVDIPVPTS DL RVN+VL+  C+ A  D  L +LLLD P++MGV
Sbjct  194  LIVKAVNLSKDWARAVVDIPVPTSVDLARVNDVLYDVCQQALVDRDLSQLLLDAPSLMGV  253

Query  252  ERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAV  302
            E IEVD V +R+VARTLPGKQFE GR+LR  VI AL +AG+    D+R  V
Sbjct  254  ESIEVDRVNVRMVARTLPGKQFEVGRRLRAKVIAALAKAGVALVGDSRPTV  304


>gi|226305795|ref|YP_002765755.1| MscS family protein [Rhodococcus erythropolis PR4]
 gi|226184912|dbj|BAH33016.1| putative MscS family protein [Rhodococcus erythropolis PR4]
Length=294

 Score =  343 bits (879),  Expect = 3e-92, Method: Compositional matrix adjust.
 Identities = 169/283 (60%), Positives = 212/283 (75%), Gaps = 0/283 (0%)

Query  26   DWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASV  85
            DW+   GL ++M ++ A++ AR V+W  N+VT ++D  +   DALVRSEATKHR +VA V
Sbjct  12   DWLQTTGLSVLMTVLGAMILARLVSWGGNKVTDQIDSNYQLGDALVRSEATKHRHSVAQV  71

Query  86   ISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEK  145
            I+WV I  IYV+   +V+D L +P+G+LV PA VLGAALGFGAQR+VQD+LAGFFII E+
Sbjct  72   ITWVVITFIYVIATLKVLDQLNLPIGSLVAPATVLGAALGFGAQRVVQDILAGFFIITER  131

Query  146  QYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWAR  205
            QYGFGD V L++ GS ++A G +EDVTLRVT++R+S+GEV TVPNG IVK+ NLSKDWAR
Sbjct  132  QYGFGDTVRLAITGSSDDAEGVIEDVTLRVTRMRNSDGEVITVPNGQIVKATNLSKDWAR  191

Query  206  AVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVA  265
            AV+D+PVP +ADL RVNEVL Q    A  D  L +LLLDEPTVMGVE +EVD V +R+VA
Sbjct  192  AVIDVPVPATADLTRVNEVLRQVGVDAMADRGLKKLLLDEPTVMGVESLEVDQVNVRMVA  251

Query  266  RTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESPEQ  308
            RTLPGKQF+ GR LRV V  AL R GI  + D   A  E   +
Sbjct  252  RTLPGKQFQVGRALRVRVAAALRRQGITVSPDLHTARTEEASE  294


>gi|312140590|ref|YP_004007926.1| mechanosensitive ion channel [Rhodococcus equi 103S]
 gi|325675788|ref|ZP_08155472.1| small conductance mechanosensitive ion channel family transporter 
[Rhodococcus equi ATCC 33707]
 gi|311889929|emb|CBH49246.1| putative mechanosensitive ion channel [Rhodococcus equi 103S]
 gi|325553759|gb|EGD23437.1| small conductance mechanosensitive ion channel family transporter 
[Rhodococcus equi ATCC 33707]
Length=301

 Score =  341 bits (875),  Expect = 7e-92, Method: Compositional matrix adjust.
 Identities = 165/275 (60%), Positives = 215/275 (79%), Gaps = 0/275 (0%)

Query  26   DWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASV  85
            DW+   GL I + ++ AV+ ARFV W   R+T+R+D  + + DALVRSEATKHR +VA V
Sbjct  18   DWLKVTGLPIALTVLGAVILARFVNWAGGRITQRIDDNYQQGDALVRSEATKHRHSVAQV  77

Query  86   ISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEK  145
            I+WV I +IYV+   +V+++L +P+G+LV PA VLGAALGFGAQR+VQD+LAGFFII E+
Sbjct  78   ITWVVITIIYVITAMKVLNLLGLPIGSLVAPATVLGAALGFGAQRVVQDILAGFFIITER  137

Query  146  QYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWAR  205
            QYGFGD V++++ GS  +A G +EDVTLRVT++R+++GEV TVPNG IVK+VNLSKDWAR
Sbjct  138  QYGFGDTVQIAITGSGTDAEGVIEDVTLRVTRMRNADGEVITVPNGQIVKAVNLSKDWAR  197

Query  206  AVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVA  265
            AVVD+P+P SAD+ RVN++LH+    A  D  L  LLLD P+VMGVE + VD V++R+VA
Sbjct  198  AVVDVPIPASADINRVNDILHRVGVDAYEDKSLRPLLLDTPSVMGVESLAVDQVSVRMVA  257

Query  266  RTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA  300
            RTLPGKQF+ GR LRV V+ AL RAGI  AA+  A
Sbjct  258  RTLPGKQFQVGRALRVRVVTALRRAGITVAAELEA  292


>gi|229490967|ref|ZP_04384800.1| MscS Mechanosensitive ion channel [Rhodococcus erythropolis SK121]
 gi|229322083|gb|EEN87871.1| MscS Mechanosensitive ion channel [Rhodococcus erythropolis SK121]
Length=294

 Score =  341 bits (874),  Expect = 9e-92, Method: Compositional matrix adjust.
 Identities = 167/272 (62%), Positives = 209/272 (77%), Gaps = 0/272 (0%)

Query  26   DWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASV  85
            DW+   GL ++M ++ A++ AR V+W  N+VT ++D  +   DALVRSEATKHR +VA V
Sbjct  12   DWLQTTGLSVLMTVLGAMILARLVSWGGNKVTDQIDSNYQLGDALVRSEATKHRHSVAQV  71

Query  86   ISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEK  145
            I+WV I  IYV+   +V+D L +P+G+LV PA VLGAALGFGAQR+VQD+LAGFFII E+
Sbjct  72   ITWVVITFIYVIATLKVLDQLNLPIGSLVAPATVLGAALGFGAQRVVQDILAGFFIITER  131

Query  146  QYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWAR  205
            QYGFGD V L++ GS ++A G +EDVTLRVT++R+S+GEV TVPNG IVK+ NLSKDWAR
Sbjct  132  QYGFGDTVRLAITGSSDDAEGVIEDVTLRVTRMRNSDGEVITVPNGQIVKATNLSKDWAR  191

Query  206  AVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVA  265
            AV+D+PVP +ADL RVNEVL Q    A  D  L +LLLDEPTVMGVE +EVD V +R+VA
Sbjct  192  AVIDVPVPATADLTRVNEVLRQVGVDAMADRGLKKLLLDEPTVMGVESLEVDQVNVRMVA  251

Query  266  RTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD  297
            RTLPGKQF+ GR LRV V  AL R GI  + D
Sbjct  252  RTLPGKQFQVGRALRVRVAAALRRQGITVSPD  283


>gi|111023367|ref|YP_706339.1| hypothetical protein RHA1_ro06405 [Rhodococcus jostii RHA1]
 gi|226365871|ref|YP_002783654.1| MscS family transporter [Rhodococcus opacus B4]
 gi|110822897|gb|ABG98181.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
 gi|226244361|dbj|BAH54709.1| putative MscS family transporter [Rhodococcus opacus B4]
Length=298

 Score =  331 bits (848),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 169/282 (60%), Positives = 217/282 (77%), Gaps = 3/282 (1%)

Query  26   DWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASV  85
            DW+ + GL + + ++ A+L ARFV W  ++VT R+D  + + DALVRSEATKHR +VA V
Sbjct  16   DWLSSTGLAVSLTVLGAILMARFVNWGGSKVTDRIDSNYMQGDALVRSEATKHRHSVAQV  75

Query  86   ISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEK  145
            I+WV I +IYV+   +V+D L +P+G+LV PA VLGAALGFGAQR+VQD+LAGFFII E+
Sbjct  76   ITWVIITIIYVIATMKVLDQLSLPIGSLVAPATVLGAALGFGAQRVVQDILAGFFIITER  135

Query  146  QYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWAR  205
            QYGFGD V+L++ GS E+A G +EDVTLRVT++R+S+GEV TVPNG IVK++NLSKDWAR
Sbjct  136  QYGFGDTVQLAVTGSSEDAEGVIEDVTLRVTRMRNSDGEVITVPNGQIVKAINLSKDWAR  195

Query  206  AVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVA  265
            AV+D+PVP ++D+ RVNEVLHQ    A  D  L +LLLDEPTVMGVE + VD V++R+VA
Sbjct  196  AVIDVPVPATSDINRVNEVLHQVGVEAFADRGLKKLLLDEPTVMGVESLTVDEVSVRVVA  255

Query  266  RTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD---ARAAVAE  304
            RTLPGKQF+ GR LRV +  A+ R GI    D    RAA  E
Sbjct  256  RTLPGKQFQVGRALRVRIATAMRRQGITVEPDLQTVRAAEGE  297


>gi|296140714|ref|YP_003647957.1| mechanosensitive ion channel MscS [Tsukamurella paurometabola 
DSM 20162]
 gi|296028848|gb|ADG79618.1| MscS Mechanosensitive ion channel [Tsukamurella paurometabola 
DSM 20162]
Length=309

 Score =  330 bits (846),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 165/265 (63%), Positives = 203/265 (77%), Gaps = 1/265 (0%)

Query  28   ILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVIS  87
            +  R L I +  IAAVLA RFV W + RVT R+D  F  SD+LVRSE+ KH+ AV  VIS
Sbjct  22   MFERVLPIALWSIAAVLANRFVNWASARVTMRIDAEFKNSDSLVRSESAKHQHAVIQVIS  81

Query  88   WVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQY  147
            WV+I  IY++  Y++I  L VP+ ALV PA V+GAALGFGAQR+VQDLLAGFF+I E+QY
Sbjct  82   WVAIAAIYLLAGYQIIVALGVPITALVAPATVIGAALGFGAQRVVQDLLAGFFLITERQY  141

Query  148  GFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAV  207
            GFGD+V L++ G    A GTVEDVTLRVTKLR+++GEV TVPNG +VK+ NLSKDWARAV
Sbjct  142  GFGDVVNLALTGG-STAEGTVEDVTLRVTKLRNTDGEVITVPNGQVVKATNLSKDWARAV  200

Query  208  VDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVART  267
            VDIP+PT+ DLG+VN +LH   E A  D  +  LLLDEP+VMGVE I++D V +R+VART
Sbjct  201  VDIPLPTTVDLGKVNALLHTVGERAFQDPYMSTLLLDEPSVMGVESIDLDQVNMRMVART  260

Query  268  LPGKQFEAGRQLRVLVIRALTRAGI  292
            LPGKQFE GR LR  ++R+L  AGI
Sbjct  261  LPGKQFEVGRNLRERIVRSLATAGI  285


>gi|54026460|ref|YP_120702.1| putative transporter [Nocardia farcinica IFM 10152]
 gi|54017968|dbj|BAD59338.1| putative transporter [Nocardia farcinica IFM 10152]
Length=282

 Score =  321 bits (822),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 158/266 (60%), Positives = 203/266 (77%), Gaps = 0/266 (0%)

Query  27   WILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVI  86
            W+ + GL IV+L++ A+L +RF T++ +R+T ++D GF   DALVR+EA KHR A+A V+
Sbjct  13   WLRSNGLEIVLLILGAMLFSRFATYVRDRITAKIDAGFRGGDALVRTEAAKHRHALAQVL  72

Query  87   SWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQ  146
            +WV + + YV+V  EV+  L   V  LV PAAVLGAALGFGAQR+VQD+LAGFF+I E+Q
Sbjct  73   TWVVLTIAYVLVGMEVLQRLGFQVTGLVAPAAVLGAALGFGAQRIVQDILAGFFLITERQ  132

Query  147  YGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARA  206
            YGFGD+V +++ GS E A GTVEDVTLR+T LR+++GEV TVPNG IVK  NLSKDWARA
Sbjct  133  YGFGDVVRIAVTGSAEMAEGTVEDVTLRITTLRNADGEVITVPNGQIVKVTNLSKDWARA  192

Query  207  VVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVAR  266
             +D+PV  SAD+ RVNE+LH+    A  D  L  LLLDEPTVMG++ + VD + +R+VAR
Sbjct  193  AIDVPVAASADITRVNEILHKVGAEAFRDPRLEPLLLDEPTVMGLDDLSVDQMNIRMVAR  252

Query  267  TLPGKQFEAGRQLRVLVIRALTRAGI  292
            TLPGKQFE GR+LRV V  AL R GI
Sbjct  253  TLPGKQFEVGRELRVRVASALRREGI  278


>gi|339295940|gb|AEJ48051.1| hypothetical protein CCDC5079_2861 [Mycobacterium tuberculosis 
CCDC5079]
Length=183

 Score =  314 bits (804),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 177/183 (97%), Positives = 178/183 (98%), Gaps = 0/183 (0%)

Query  1    MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL  60
            MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL
Sbjct  1    MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL  60

Query  61   DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL  120
            DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL
Sbjct  61   DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL  120

Query  121  GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS  180
            GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVT+   
Sbjct  121  GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTQAAF  180

Query  181  SEG  183
              G
Sbjct  181  QRG  183


>gi|120401156|ref|YP_950985.1| mechanosensitive ion channel protein MscS [Mycobacterium vanbaalenii 
PYR-1]
 gi|119953974|gb|ABM10979.1| MscS Mechanosensitive ion channel [Mycobacterium vanbaalenii 
PYR-1]
Length=275

 Score =  309 bits (791),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 167/273 (62%), Positives = 208/273 (77%), Gaps = 2/273 (0%)

Query  24   IGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVA  83
            +G WI+  GL I M+++ A++  R + W A RV+RR+  G  + +  VRSE  KHRQAVA
Sbjct  5    VGQWIMTTGLHIAMVVVFALVVTRAIRWAAERVSRRIADG-DDREPTVRSETVKHRQAVA  63

Query  84   SVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIV  143
            +  S V+I ++YV+V  ++ + L +P+ +LV PAAVLGAALGFGAQRLVQDLL+GFF+I 
Sbjct  64   AATSSVAIGVLYVLVALDIANQLGLPIASLVAPAAVLGAALGFGAQRLVQDLLSGFFVIS  123

Query  144  EKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDW  203
            EKQYGFGDLVEL+ V +   A GTVE VTLRVTKLR+SEGEV+TVPNG I KS NLSKDW
Sbjct  124  EKQYGFGDLVELT-VSAGGTATGTVEAVTLRVTKLRTSEGEVYTVPNGMIAKSRNLSKDW  182

Query  204  ARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRL  263
            A AVVD+PVP++AD+ RVN+VL +    A +D  L  LLLDEP +MGVE IEVDTV +R+
Sbjct  183  ASAVVDVPVPSTADINRVNDVLREVAVTAGNDEDLARLLLDEPQLMGVESIEVDTVNVRM  242

Query  264  VARTLPGKQFEAGRQLRVLVIRALTRAGIVTAA  296
            VARTLPGKQFE GR+LR LV+ AL R GI  AA
Sbjct  243  VARTLPGKQFEVGRRLRALVVAALRREGIALAA  275


>gi|158318417|ref|YP_001510925.1| mechanosensitive ion channel MscS [Frankia sp. EAN1pec]
 gi|158113822|gb|ABW16019.1| MscS Mechanosensitive ion channel [Frankia sp. EAN1pec]
Length=293

 Score =  303 bits (777),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 160/275 (59%), Positives = 202/275 (74%), Gaps = 0/275 (0%)

Query  23   EIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAV  82
            +I +W   RGL IVM++IAAVL  RF TW+ +RV RR+D   ++SD +VRSEATKHR AV
Sbjct  10   DISEWARGRGLEIVMIVIAAVLLTRFATWVGDRVERRIDQQSSQSDGVVRSEATKHRHAV  69

Query  83   ASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFII  142
              V++WVS+ L+Y V V  V+  L VPV  +V PA V+G ALGFGAQR+VQD+LAGFF++
Sbjct  70   VQVLTWVSLALVYCVAVVLVLQRLGVPVTGIVAPATVVGVALGFGAQRVVQDVLAGFFLV  129

Query  143  VEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKD  202
             E+QYGFGDLV L + G+P    GTVE+VTLR+T +R+S GEV   PNG IV+ VNLS+D
Sbjct  130  TERQYGFGDLVRLVVQGAPSAVTGTVEEVTLRITSVRTSNGEVVITPNGQIVQVVNLSRD  189

Query  203  WARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLR  262
            WARAVVD+P+PTS D+  V++VL +    A  D  L +LLLD PTVMGVE I++D   +R
Sbjct  190  WARAVVDVPIPTSVDVTTVSDVLARVGAEAYADDALHDLLLDAPTVMGVESIDLDQFKIR  249

Query  263  LVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD  297
            +VARTLPGKQFE GR LR  +  AL RAGI   AD
Sbjct  250  VVARTLPGKQFEVGRALRAKITVALLRAGIHVPAD  284


>gi|284993248|ref|YP_003411803.1| mechanosensitive ion channel MscS [Geodermatophilus obscurus 
DSM 43160]
 gi|284066494|gb|ADB77432.1| MscS Mechanosensitive ion channel [Geodermatophilus obscurus 
DSM 43160]
Length=301

 Score =  296 bits (759),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 158/266 (60%), Positives = 198/266 (75%), Gaps = 0/266 (0%)

Query  27   WILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVI  86
            W+  RGL IV+L++ +VL ARFV W+  ++T R+D   T  DALVRSEA KHR ++  VI
Sbjct  10   WLAGRGLEIVLLILGSVLLARFVAWVGEKITDRIDARATGGDALVRSEAAKHRHSLTQVI  69

Query  87   SWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQ  146
            +W  IVLIY V V+ V+D   +P+G LV PA VLG  LGFGAQR+V D+LAGFFII E+Q
Sbjct  70   TWTLIVLIYAVAVFAVLDRAGIPIGGLVAPATVLGVGLGFGAQRIVGDVLAGFFIITERQ  129

Query  147  YGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARA  206
            YGFGD+V + +VG  E A GT+EDVTLRVT+LRS+ GEV T+PNG IVK  NLS+DWARA
Sbjct  130  YGFGDVVSIQVVGGVEPAEGTIEDVTLRVTRLRSANGEVVTLPNGQIVKVTNLSRDWARA  189

Query  207  VVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVAR  266
            VVD+PVPT+ D+ RVNE+L +    A HD  L  LLLD P+VMGVE I+++ V +R+VAR
Sbjct  190  VVDVPVPTTVDVNRVNEILKEVGAEAFHDQRLRPLLLDPPSVMGVETIDLEQVNVRMVAR  249

Query  267  TLPGKQFEAGRQLRVLVIRALTRAGI  292
            TLPGKQFE GR LR  V+ A  R G+
Sbjct  250  TLPGKQFEVGRDLRARVVLAFRREGL  275


>gi|288924090|ref|ZP_06418144.1| MscS Mechanosensitive ion channel [Frankia sp. EUN1f]
 gi|288344561|gb|EFC79036.1| MscS Mechanosensitive ion channel [Frankia sp. EUN1f]
Length=302

 Score =  295 bits (755),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 149/270 (56%), Positives = 192/270 (72%), Gaps = 0/270 (0%)

Query  23   EIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAV  82
            +I +W   +GL IVM++I AVL  RF  W   RV RR+D     +D  VRSE TKHR AV
Sbjct  19   DISEWARGQGLEIVMIVIGAVLLTRFANWAGARVERRIDARALVTDGAVRSETTKHRHAV  78

Query  83   ASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFII  142
              V++WV++VL+Y V V  V+  L VP+  +V PA VLG ALGFGAQR+VQD+LAGFF++
Sbjct  79   VQVLTWVTLVLVYCVAVMLVLRRLGVPLTGIVAPATVLGVALGFGAQRIVQDVLAGFFMV  138

Query  143  VEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKD  202
             E+QYGFGDLV L + GSP    GTVE+VTLR+T++R+  GEV   PNG IV+ VNLS+D
Sbjct  139  AERQYGFGDLVRLVVQGSPTAITGTVEEVTLRITRVRTPNGEVVITPNGQIVQVVNLSRD  198

Query  203  WARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLR  262
            WARAV+++P+P+S D+  V +VL +    A  D  L  LLLDEPTVMGVE +++D   ++
Sbjct  199  WARAVINVPIPSSVDVATVTDVLTEVGVDAYADEALHGLLLDEPTVMGVESLDLDQFKVQ  258

Query  263  LVARTLPGKQFEAGRQLRVLVIRALTRAGI  292
            +VARTLPGKQFE GR LR  +  AL RAGI
Sbjct  259  IVARTLPGKQFEVGRALRARISGALLRAGI  288


>gi|111224900|ref|YP_715694.1| hypothetical protein FRAAL5535 [Frankia alni ACN14a]
 gi|111152432|emb|CAJ64168.1| Conserved hypothetical protein [Frankia alni ACN14a]
Length=304

 Score =  288 bits (738),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 144/284 (51%), Positives = 194/284 (69%), Gaps = 1/284 (0%)

Query  23   EIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAV  82
            +IG W    GL +V+L+  A L  R  TWL +RVT R+D+  T +D +VR+EA KHR AV
Sbjct  20   DIGHWARGSGLEVVLLVTGAALLTRLATWLGDRVTSRIDVPATGADRVVRTEAAKHRHAV  79

Query  83   ASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFII  142
            A V++W  +V++Y +    V+    VP+   V PA ++G ALGFGAQR+VQD+LAGFFII
Sbjct  80   AQVVTWTVLVIVYCLTAVLVLQRFGVPLTGFVAPATIVGVALGFGAQRVVQDILAGFFII  139

Query  143  VEKQYGFGDLVELSMVGSP-ENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSK  201
             E+QYGFGDLV L + G P   + GTVE+VTLR+T++R+S GEV T  NG IV+ +NLS+
Sbjct  140  AERQYGFGDLVRLLVAGGPAAGSTGTVEEVTLRITRIRTSSGEVVTTSNGQIVQVINLSR  199

Query  202  DWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTL  261
            DWARA+VD+P+P +ADL  V+++L++    A  D  L  LLLD PTVMGVE +++D   +
Sbjct  200  DWARAIVDVPIPATADLTTVSDLLNRVGAEAYADETLHALLLDAPTVMGVESMDLDEFKI  259

Query  262  RLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAES  305
            R+VART PG+QFE GR LR  +  AL R GI+   D   A   S
Sbjct  260  RVVARTQPGRQFEVGRTLRARIGTALLREGIIVPTDLDTAAPTS  303


>gi|343924878|ref|ZP_08764415.1| putative MscS family protein [Gordonia alkanivorans NBRC 16433]
 gi|343765224|dbj|GAA11341.1| putative MscS family protein [Gordonia alkanivorans NBRC 16433]
Length=321

 Score =  285 bits (728),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 154/290 (54%), Positives = 205/290 (71%), Gaps = 11/290 (3%)

Query  22   GEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQA  81
            G +  W+   GL IV+ ++ AVL AR + W A +   R++  F+ SD +V++E  KHR+A
Sbjct  22   GRVYVWLATSGLEIVIWILGAVLLARVIRWFAGKYAARVETRFSTSDLIVQTEDAKHRRA  81

Query  82   VASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFI  141
            +  V++W  IV I +VVV  ++ V  +P+  L GP AV+GAALGFGAQR+VQD+LAGFF+
Sbjct  82   LVDVVAWTLIVGIAIVVVIHILGVFGIPLSGLTGPTAVIGAALGFGAQRIVQDILAGFFV  141

Query  142  IVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSK  201
            + EKQYG+GD+V L++ G+   A GTVEDVTLRVTKLR++EGEV TVPNG I+K+ NLSK
Sbjct  142  VAEKQYGYGDVVNLTVTGN-APAEGTVEDVTLRVTKLRTTEGEVITVPNGQIIKATNLSK  200

Query  202  DWARAVVDIPVPTSADLGRVNEVL----HQECEHAR-HDSLLGELLLDEPTVMGVERIEV  256
            DWARAVVD+PVP+ AD+G VN+ L    HQ  E  R HD     +LLD P+ +GV  +E+
Sbjct  201  DWARAVVDVPVPSEADIGLVNDTLDRVGHQFYELPRWHD-----ILLDAPSSLGVINLEL  255

Query  257  DTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESP  306
            D++T+R+V RTLPGKQFE GR LRV +IRAL R GI+  A      A  P
Sbjct  256  DSITVRMVTRTLPGKQFEVGRALRVHIIRALAREGIMVPAGREVQAAGGP  305


>gi|262203334|ref|YP_003274542.1| mechanosensitive ion channel protein MscS [Gordonia bronchialis 
DSM 43247]
 gi|262086681|gb|ACY22649.1| MscS Mechanosensitive ion channel [Gordonia bronchialis DSM 43247]
Length=320

 Score =  280 bits (716),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 142/277 (52%), Positives = 197/277 (72%), Gaps = 1/277 (0%)

Query  30   NRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWV  89
             +GL +++ ++ A+L  RF+ W A++   R+D  FT SD +V++E  KHR+A+  V++W 
Sbjct  30   TKGLEVLVWILGAILVIRFIRWSADKYASRVDSRFTNSDLIVQTEDAKHRRALVDVVAWT  89

Query  90   SIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGF  149
             IV++ ++V+   + V    +GAL GP AV+GAALGFGAQR+VQD+LAGFF++ E+QYG+
Sbjct  90   LIVIVGIIVILHALSVYGFKLGALTGPTAVIGAALGFGAQRIVQDILAGFFVVAERQYGY  149

Query  150  GDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVD  209
            GD+V L++ G  ++A GTVEDVTLRVTKLR+SEGEV TVPNG I+K+ NLSKDWARAVVD
Sbjct  150  GDVVSLTVTGG-KDADGTVEDVTLRVTKLRTSEGEVITVPNGQIIKATNLSKDWARAVVD  208

Query  210  IPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLP  269
            +PVP  A++G VN+ L +            +LLLD P+ +GV  +E+D++T+R+V RTLP
Sbjct  209  VPVPAEAEIGLVNDTLDRVGREFYEQKRWHDLLLDAPSSLGVIDLELDSITVRMVTRTLP  268

Query  270  GKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESP  306
            GKQFE GR LR  V+RAL R GI  A       A  P
Sbjct  269  GKQFEVGRALRANVVRALAREGITVAPGRDVTAAGGP  305


>gi|326383345|ref|ZP_08205033.1| MscS mechanosensitive ion channel [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326198095|gb|EGD55281.1| MscS mechanosensitive ion channel [Gordonia neofelifaecis NRRL 
B-59395]
Length=312

 Score =  259 bits (663),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 139/293 (48%), Positives = 191/293 (66%), Gaps = 7/293 (2%)

Query  16   WHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEA  75
            W   W     +W+    + I++ +I  +L  RF  W+A+R + R+   F  SD +V+SE 
Sbjct  16   WMRAWE----EWLAVDFVSILLWVIGGILVVRFFRWIADRYSSRILKQFESSDDIVQSED  71

Query  76   TKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDL  135
             KHR+A+  V++W  + +I V V   V+    +P  +LVG +AV+GAALGFGAQR+VQDL
Sbjct  72   MKHRRALVEVVTWTLVAIIAVAVTLHVLATW-IPSSSLVGLSAVVGAALGFGAQRVVQDL  130

Query  136  LAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVK  195
            LAGFFII E QYG+GD+V LS+ G   +A GTVEDVTLRVT+LR+S+GE+  VPNG ++K
Sbjct  131  LAGFFIIAEHQYGYGDVVNLSVTGGL-SAEGTVEDVTLRVTRLRNSDGELIVVPNGQMIK  189

Query  196  SVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIE  255
            + NLSKDWARAVVD+PVP  AD+  VN  L +       +     LLLD P+ +G+  +E
Sbjct  190  ATNLSKDWARAVVDVPVPIDADINEVNATLREVGAEFYDNPKWNRLLLDAPSSLGIISME  249

Query  256  VDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAES-PE  307
            +D+ T+R+VARTLPG+QF  GR LR  +I  L R GI      +A V  + PE
Sbjct  250  LDSATVRMVARTLPGQQFVIGRALRGDIIYGLARHGIFVQTKQKAVVKTAEPE  302


>gi|296392774|ref|YP_003657658.1| mechanosensitive ion channel protein MscS [Segniliparus rotundus 
DSM 44985]
 gi|296179921|gb|ADG96827.1| MscS Mechanosensitive ion channel [Segniliparus rotundus DSM 
44985]
Length=326

 Score =  258 bits (659),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 146/281 (52%), Positives = 191/281 (68%), Gaps = 2/281 (0%)

Query  24   IGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVA  83
             GDW+L RG+RIVM +IAAVL ARF+ W A  +  R  L F++  + VRSE ++ R+ +A
Sbjct  25   FGDWMLTRGVRIVMAMIAAVLLARFLRWAAG-IFGRGGL-FSQKHSGVRSEGSRQRETLA  82

Query  84   SVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIV  143
            + I+W   VL+Y V    +  +L   +  L  PA   GA LGFGAQR+VQDLL+GFFII 
Sbjct  83   ATIAWALTVLVYFVAGLRIAKLLEFDLTGLTVPATAAGAGLGFGAQRIVQDLLSGFFIIA  142

Query  144  EKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDW  203
            EKQY  GDLV+LS++G+  +  GTVE+VTLRVTKLRSSEG++FTVPNG IVKS N+SKDW
Sbjct  143  EKQYRIGDLVQLSVLGTTYDPVGTVEEVTLRVTKLRSSEGQLFTVPNGQIVKSTNMSKDW  202

Query  204  ARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRL  263
            ++AVVDIPVP S D+G V E L + C  A+ D  L  LL  EP   GVE IE+D  ++R+
Sbjct  203  SQAVVDIPVPNSTDIGLVREKLVEICAAAKEDPNLATLLRGEPVYTGVESIELDRTSMRI  262

Query  264  VARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE  304
            VA ++PG+QF   R+LR  ++  L + GI T A    A  E
Sbjct  263  VANSVPGQQFVLSRRLRARILSDLRKEGIATMASPGPAQPE  303


>gi|317507692|ref|ZP_07965399.1| mechanosensitive ion channel [Segniliparus rugosus ATCC BAA-974]
 gi|316254019|gb|EFV13382.1| mechanosensitive ion channel [Segniliparus rugosus ATCC BAA-974]
Length=327

 Score =  254 bits (650),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 137/293 (47%), Positives = 189/293 (65%), Gaps = 3/293 (1%)

Query  16   WHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEA  75
            W +F   + G+W+L +G RI +++IA +L  RFV   AN + R     F E +  +R EA
Sbjct  19   WQHFGVRDFGEWLLVKGTRIALIIIATILVTRFVKASANVIARG---SFKEQEPQIRGEA  75

Query  76   TKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDL  135
             + R  + S   WV  V+   V V  +   L +P+      AAV GA LGFGAQR+VQD+
Sbjct  76   ARQRATLLSAFIWVFTVIQIFVAVLMIATALELPISGFAPLAAVAGAGLGFGAQRIVQDV  135

Query  136  LAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVK  195
            L+GFFII EKQY  GDLV+L+++G+  +  GTVE VTLRVTKLRS++GE++TVPNG I+K
Sbjct  136  LSGFFIIAEKQYRIGDLVQLAVLGTTNDPIGTVEQVTLRVTKLRSTDGELYTVPNGQIIK  195

Query  196  SVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIE  255
            S NLSKDWA+AVVDIPVP S+D+  + E L + C+ A+ D  L  LL   PT +GVE IE
Sbjct  196  STNLSKDWAQAVVDIPVPASSDIAVLREKLTEVCDTAKDDPNLKPLLRSAPTFLGVEGIE  255

Query  256  VDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESPEQ  308
            +D + +R+VA ++PG+QF   R+LR   + AL + GI T  +      E P+Q
Sbjct  256  MDQINMRIVANSVPGQQFVLSRRLRAKALAALRQEGINTVKNGEDHAPERPQQ  308


>gi|339295939|gb|AEJ48050.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079]
Length=124

 Score =  248 bits (633),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%)

Query  185  VFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLD  244
            +FTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLD
Sbjct  1    MFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLD  60

Query  245  EPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE  304
            EPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE
Sbjct  61   EPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE  120

Query  305  SPEQ  308
            SPEQ
Sbjct  121  SPEQ  124


>gi|319951471|ref|ZP_08025280.1| MscS mechanosensitive ion channel [Dietzia cinnamea P4]
 gi|319434863|gb|EFV90174.1| MscS mechanosensitive ion channel [Dietzia cinnamea P4]
Length=298

 Score =  236 bits (602),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 129/276 (47%), Positives = 193/276 (70%), Gaps = 4/276 (1%)

Query  27   WILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVI  86
            W+ N GL +V+L++ AVL  R +  +A   T R+D     +D  + SE +KH  ++  V+
Sbjct  13   WLSNEGLEVVLLVLGAVLLTRVIGKIARMWTGRIDA--KNADKELWSEESKHLHSLIQVL  70

Query  87   SWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQ  146
            S+V++ ++YV+   +++    V + ALV PA VLGAALGFGAQ++VQD LAGFF++ E+Q
Sbjct  71   SYVAVAVLYVLFGIQILLRFGVNLVALVAPATVLGAALGFGAQKIVQDFLAGFFVLAERQ  130

Query  147  YGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARA  206
            YG+GD+VEL+       AAGT+EDVTLRVT+LR+ +GE   VPNG IV +VN S+DWARA
Sbjct  131  YGYGDIVELTTATGV--AAGTIEDVTLRVTRLRTLDGEAVIVPNGQIVTAVNQSQDWARA  188

Query  207  VVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVAR  266
            ++D+PVP +AD+ + +EVL + C     D  +GE +LDEP+VMGV+ I+++   +RL+AR
Sbjct  189  IIDVPVPNNADMDKAHEVLAEVCRDIVDDDRVGEYVLDEPSVMGVQSIKLEQTIIRLLAR  248

Query  267  TLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAV  302
            T PG Q+E GR++R +++R   + GIV   +A AA+
Sbjct  249  TKPGMQWEVGRRMRAVILRRFRQEGIVLEPEALAAI  284


>gi|295396667|ref|ZP_06806814.1| small conductance mechanosensitive ion channel family transporter 
[Brevibacterium mcbrellneri ATCC 49030]
 gi|294970476|gb|EFG46404.1| small conductance mechanosensitive ion channel family transporter 
[Brevibacterium mcbrellneri ATCC 49030]
Length=348

 Score =  172 bits (435),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 102/296 (35%), Positives = 160/296 (55%), Gaps = 22/296 (7%)

Query  27   WILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFT----------------ESDAL  70
            +++   LRI +L++ A+L    V  L  +  R++  G T                ++D  
Sbjct  39   FLIGAPLRIAILVVMAILVTFLVRLLIRKFARKIAEGTTAVSSRRFGGDARDRVIKTDPA  98

Query  71   VRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQR  130
              +   +  Q V S++S ++ ++I+V++   ++  L      ++  A V G A+GFGAQ 
Sbjct  99   SVARRAQRAQTVGSLLSSIAAIIIFVIMALMIMQELGYNPAPILASAGVAGVAIGFGAQS  158

Query  131  LVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPN  190
            LV+D L+GFFI+ E QYG GD V+L        A GTVEDV LR TK+R  +G ++ VPN
Sbjct  159  LVRDYLSGFFIVAEDQYGIGDTVDLG------EAVGTVEDVGLRTTKVRGIDGTLWHVPN  212

Query  191  GNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMG  250
            G I++  N S+ WARAV+D+PVP  AD   V+E +    E  R+   L   +L+EP + G
Sbjct  213  GEILRVGNQSQGWARAVMDLPVPYDADQKVVDEAIQAAVESMRNKPDLAPSILEEPEIWG  272

Query  251  VERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESP  306
            V+ I  + VT+R V +T P +Q+   R  R  + R L + GI  A  A++ +   P
Sbjct  273  VQEISGNAVTIRTVIKTKPNEQWGVARAFRAEIQRELRKRGITIAIPAQSLIGTVP  328


>gi|326333761|ref|ZP_08199994.1| transporter, small conductance mechanosensitive ion channel (MscS) 
family [Nocardioidaceae bacterium Broad-1]
 gi|325948343|gb|EGD40450.1| transporter, small conductance mechanosensitive ion channel (MscS) 
family [Nocardioidaceae bacterium Broad-1]
Length=316

 Score =  160 bits (405),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 98/285 (35%), Positives = 161/285 (57%), Gaps = 25/285 (8%)

Query  23   EIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALV-----------  71
            ++G+W++   LRI+ L++ AV+    + W+ +RV  ++     E+ AL            
Sbjct  16   KLGEWVIGIPLRILGLILLAVV----LRWVLHRVIDKVVHRAVEAPALAGKITKMHEPGE  71

Query  72   ----RSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFG  127
                 S  ++  QA+ S+   V   ++  V    ++D L + +  ++  A ++G ALGFG
Sbjct  72   EIHASSRRSQRAQAIGSLFKSVVTGVLVAVFATMILDQLGINIAPIIASAGIVGLALGFG  131

Query  128  AQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFT  187
            AQ LV+D L+G F+I+E QYG GD +E++      N +GTVE VTLR+T+LRS +G V+ 
Sbjct  132  AQSLVRDYLSGIFMIIEDQYGVGDSIEVN------NISGTVEAVTLRITRLRSLDGTVWY  185

Query  188  VPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPT  247
            +PNG I+   N S++WARAV+D+ V  + DL +V  VL +       D      +++EP 
Sbjct  186  IPNGEILTVGNHSQNWARAVIDVGVGYNEDLNKVQRVLREVSHDLWVDEDFKGQIIEEPE  245

Query  248  VMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGI  292
            V GVE +  D +T+R++ +TLP KQ+   R++R  +   L   GI
Sbjct  246  VTGVEALAADAITVRVLVKTLPLKQWAIAREMRQRIKARLDYEGI  290


>gi|311743075|ref|ZP_07716883.1| mechanosensitive ion channel family protein [Aeromicrobium marinum 
DSM 15272]
 gi|311313755|gb|EFQ83664.1| mechanosensitive ion channel family protein [Aeromicrobium marinum 
DSM 15272]
Length=304

 Score =  158 bits (400),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 95/243 (40%), Positives = 141/243 (59%), Gaps = 10/243 (4%)

Query  69   ALVRSEATKHRQ----AVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAAL  124
            A +R  A++ RQ    A+  +++ ++ +LI  +    ++D L V +  L+  A +LG AL
Sbjct  68   ADLRPGASQRRQQRATAIGDLLTSIASILIAGIAFVMILDQLGVNIAPLLTGAGILGVAL  127

Query  125  GFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGE  184
            GFGAQ LV+D LAG F+I+E QYG GD++++        A+GTVE V LR+T+LR   G 
Sbjct  128  GFGAQTLVKDFLAGIFMILEDQYGVGDVIDMG------EASGTVEAVGLRITRLRDVNGT  181

Query  185  VFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLD  244
            V+ V NG +V+  N S+ WAR V+DI V   ADL  V ++L +E      D    E++L+
Sbjct  182  VWYVRNGEVVRVGNQSQTWARTVLDITVSYDADLDVVQQILAEEAHAVYTDEKFSEVVLE  241

Query  245  EPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE  304
            EP V GVER + D   +R+V +T P +Q+   R +R  +      AGI   +  RA V E
Sbjct  242  EPEVWGVERFDSDGAVVRVVLKTAPLQQWAVARAMRQRIKYRFDEAGIEIPSLFRARVEE  301

Query  305  SPE  307
            S E
Sbjct  302  SSE  304


>gi|269125584|ref|YP_003298954.1| mechanosensitive ion channel MscS [Thermomonospora curvata DSM 
43183]
 gi|268310542|gb|ACY96916.1| MscS Mechanosensitive ion channel [Thermomonospora curvata DSM 
43183]
Length=335

 Score =  157 bits (396),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 107/307 (35%), Positives = 168/307 (55%), Gaps = 29/307 (9%)

Query  9    ATSIAQHWH-NFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLG----  63
            AT     +H + W         NR   IV+ L  A++  R V  +  ++T R+  G    
Sbjct  44   ATKFVHDYHLDLW--------TNRLFAIVVTLTVALILRRIVHRMIIKITTRMAEGTVPE  95

Query  64   --------FTESDALVRSEATKHR-QAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALV  114
                      E   ++ SE  + R + + SV+  ++ ++I    V+  +  L + +  ++
Sbjct  96   RLRSSGRTHVEGSQVLLSERRQQRAKTLGSVLRSIASIVIMGTAVFSALGELGLNLTPVL  155

Query  115  GPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLR  174
              A+V+G A+GFGAQ LV+D LAG FI++E Q+G GD+V++        A GTVE +TLR
Sbjct  156  ASASVIGVAVGFGAQSLVKDFLAGLFILLEDQFGVGDVVDVG------QAKGTVEAITLR  209

Query  175  VTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARH  234
            VT+LR   G V+ + NG I++  N S++WARAV+DIPV    D  +V E+L    +    
Sbjct  210  VTRLRDVNGVVWYIRNGEILRVGNESQNWARAVLDIPVGYEEDTTKVKEILKTTADKLAA  269

Query  235  DSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVT  294
            D    +++L+EP+V GV+ +  + V +RLV +T PG+Q E  R+LR  V  +L  AG VT
Sbjct  270  DPGWADIILEEPSVWGVQGLSGEAVVVRLVVKTAPGRQGEVARELRERVKYSLDAAG-VT  328

Query  295  AADARAA  301
             A+  AA
Sbjct  329  VANPPAA  335


>gi|332669909|ref|YP_004452917.1| mechanosensitive ion channel MscS [Cellulomonas fimi ATCC 484]
 gi|332338947|gb|AEE45530.1| MscS Mechanosensitive ion channel [Cellulomonas fimi ATCC 484]
Length=400

 Score =  155 bits (393),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 105/288 (37%), Positives = 155/288 (54%), Gaps = 27/288 (9%)

Query  26   DWILNRGLRIVML-------LIAAVLAARFVT--------WLANRVTRRL---DLGFT--  65
            +W L   LRIV++       LI    A R VT        W    V R L   D+  T  
Sbjct  36   EWFLGLPLRIVIIVAVGTVVLILLRRAIRGVTDHVADGTPWFQRGVMRPLGESDVARTLL  95

Query  66   -ESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAAL  124
              +D L  +  ++  + + SV+   + V++  ++V  V+  L V +   +  A ++G AL
Sbjct  96   RATDPLATARRSQRARTLGSVLRSTATVVVGTIMVLLVLAELGVNIAPFIASAGIVGVAL  155

Query  125  GFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGE  184
            GFGAQ LV+D L G F+++E QYG GD+V++        A GTVE VTLRVTK+R S+G 
Sbjct  156  GFGAQSLVKDFLTGLFMLLEDQYGVGDVVDVG------PATGTVEAVTLRVTKIRDSDGT  209

Query  185  VFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLD  244
            ++ VPNG++++  N ++ WA AVV+I V   ADL +V  +L +       D +LG  L  
Sbjct  210  LWYVPNGSMLRVGNKTQGWATAVVEIDVDYFADLDQVRALLREAAARVEADPVLGAHLQG  269

Query  245  EPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGI  292
             PT+ G+ER+  D +TLRL  RT P  Q++  R LR      L RA +
Sbjct  270  APTITGIERLSADAITLRLKVRTSPAMQWDVARALRTATRDVLERADV  317


>gi|302529049|ref|ZP_07281391.1| MscS mechanosensitive ion channel [Streptomyces sp. AA4]
 gi|302437944|gb|EFL09760.1| MscS mechanosensitive ion channel [Streptomyces sp. AA4]
Length=346

 Score =  155 bits (392),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 98/292 (34%), Positives = 157/292 (54%), Gaps = 22/292 (7%)

Query  17   HNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFT-ESDALVRS--  73
            HN W      W++ + L+I+M+L+ A +       L +RVT     G   +  +L+R   
Sbjct  40   HNEWLAASAGWLVTKPLKIIMILVIAFVVRYLTKRLIDRVTTLPSSGGNGKIPSLLRPLR  99

Query  74   ------------EATKHR-QAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL  120
                        E  + R + + SV+  ++  LIY +    V+  L + +  ++  A ++
Sbjct  100  ERAPEMLGTAVVERRRQRAKTIGSVLKSMATFLIYGLAFILVLGELGIDLAPIIASAGIV  159

Query  121  GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS  180
            G ALGFGAQ LV+D L+G F+++E QYG GD+V++        A GTVE V LR+T LR 
Sbjct  160  GVALGFGAQNLVKDFLSGMFMMIEDQYGVGDVVDIG------EATGTVEAVGLRITTLRD  213

Query  181  SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE  240
             +G V+ V NG +++  N S+ +A AVVD+P+  SAD+ +  EVL      A     L  
Sbjct  214  LKGTVWYVRNGEVLRVGNSSQGFAYAVVDVPLSYSADVDKATEVLSGAATKAVETDALSA  273

Query  241  LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGI  292
             +L+ P ++GVE++  + + LRL  +  PGKQ+   R+LR  ++ AL  AG 
Sbjct  274  NVLEPPEMLGVEQVTPEGIVLRLTVKVRPGKQWAVQRKLRGQLLGALEEAGF  325


>gi|271968587|ref|YP_003342783.1| mechanosensitive ion channel [Streptosporangium roseum DSM 43021]
 gi|270511762|gb|ACZ90040.1| mechanosensitive ion channel [Streptosporangium roseum DSM 43021]
Length=337

 Score =  152 bits (385),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 89/245 (37%), Positives = 145/245 (60%), Gaps = 7/245 (2%)

Query  52   LANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVG  111
            +A R+  +  +     DA+      +  + + SV+  V+ ++I       V++ L VP+ 
Sbjct  98   IAGRLRGKQSVALEGLDAVAAERRRQRAETIGSVLRPVASIVILGTAALTVLERLSVPIA  157

Query  112  ALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDV  171
             L+    ++G A+GFGAQ LV+D +AG F+++E QYG GD+++   VG+   A GTVE V
Sbjct  158  PLLTSVGIVGVAVGFGAQELVKDFIAGMFMLLEDQYGVGDVID---VGA---AIGTVEAV  211

Query  172  TLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEH  231
            TLR+T+LR  +G V+ V NG I +  N S+ W+RA VD+PV  ++D+  V  +L +  E 
Sbjct  212  TLRITRLRDIDGRVWYVRNGTITRVGNESQGWSRATVDVPVSYASDIPAVRALLKEVVED  271

Query  232  ARHDSLLGE-LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRA  290
              +DS   + ++++EP V G+E+I    +  R+ A+T+P +Q E  R+LRV +  AL RA
Sbjct  272  MWNDSTYRDSVMVEEPQVWGIEQISDTAIVFRISAKTIPSRQAEVARELRVRIKSALDRA  331

Query  291  GIVTA  295
             I  A
Sbjct  332  SIPIA  336


>gi|134097919|ref|YP_001103580.1| MscS mechanosensitive ion channel [Saccharopolyspora erythraea 
NRRL 2338]
 gi|291009511|ref|ZP_06567484.1| small conductance mechanosensitive ion channel, MscS family [Saccharopolyspora 
erythraea NRRL 2338]
 gi|133910542|emb|CAM00655.1| MscS mechanosensitive ion channel [Saccharopolyspora erythraea 
NRRL 2338]
Length=326

 Score =  152 bits (384),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 103/302 (35%), Positives = 157/302 (52%), Gaps = 19/302 (6%)

Query  20   WRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTR------------RLDLGFTES  67
            W     + ++ + L IV +L+ A L   FV    N +TR            +   G T +
Sbjct  30   WLAAYAELLIAKPLNIVFILLVAFLLRYFVHRTINGLTRGNGKTPKLLQPLKERRGDTLT  89

Query  68   DALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFG  127
              L+     +  + + SV+  ++  LI+ +    V+ V  V +G ++  A VLG A+ FG
Sbjct  90   AELLSERRKQRARTIGSVLKSIASFLIFGIASMYVLKVFDVELGPVLASAGVLGVAVAFG  149

Query  128  AQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFT  187
            AQ LV+D L+G F++VE QYG GD+V+L        A GTVE V LRVT LR   G V+ 
Sbjct  150  AQNLVRDFLSGMFMMVEDQYGVGDVVDLG------EATGTVEAVGLRVTTLRDLNGTVWY  203

Query  188  VPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPT  247
            V NG I++  N S+ +A AVVD P+  ++D+ +  EV  +    A     L + +L+ P 
Sbjct  204  VRNGEILRVGNSSQGFAVAVVDFPISHNSDVEKAIEVAGEVAAEATSREPLSQDVLEPPE  263

Query  248  VMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTA-ADARAAVAESP  306
            ++GV++I  DT+TLRL  +  PGKQ+   R+LR  + RA   + I     + R     SP
Sbjct  264  MLGVDQITSDTITLRLTTKVRPGKQWAVQRRLRAEIKRAYDDSDIQPPYPNGRPVTPTSP  323

Query  307  EQ  308
             Q
Sbjct  324  GQ  325


>gi|84494314|ref|ZP_00993433.1| small-conductance mechanosensitive channel [Janibacter sp. HTCC2649]
 gi|84383807|gb|EAP99687.1| small-conductance mechanosensitive channel [Janibacter sp. HTCC2649]
Length=308

 Score =  151 bits (381),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 105/289 (37%), Positives = 157/289 (55%), Gaps = 29/289 (10%)

Query  24   IGDWILNRGLRIVMLLIAAV--------LAARFVTWLANRVTRRLDLG---------FTE  66
            I +W+L  GLRI++ L  AV        L AR V  + ++ T R D G         F E
Sbjct  16   IQEWLLTDGLRILLTLALAVIVRWLLHRLIARVVKTMTSKTTARDDEGRDRSLTGRLFAE  75

Query  67   SDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLP---VPVGALVGPAAVLGAA  123
            + A  R+   +H+Q  A++ S +   + +VV +  ++ V+    +P+G L+  A V G A
Sbjct  76   ASATARA---RHQQRTATLGSLLRSSVTFVVGLVAMLTVMALVGIPLGPLLASAGVGGVA  132

Query  124  LGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEG  183
            LGFGAQ LV+D L+G F+I+E QYG GD+++         A GTVE+V+LRVT+LR + G
Sbjct  133  LGFGAQSLVKDFLSGVFMILEDQYGVGDVIDTG------EAIGTVEEVSLRVTRLRDANG  186

Query  184  EVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLL  243
              + + NG I++  NLS+  A A+VD+PV    D+  V  V+         D      LL
Sbjct  187  VTWYIRNGEIIRIGNLSQHRATAIVDVPVAYDEDVAHVTAVISDAAAAMAADKAWEGRLL  246

Query  244  DEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGI  292
            D P V G+E I   T+TLR++A   P  + +  R+LR  +  AL  AG+
Sbjct  247  DTPKVAGIESIVGQTMTLRVLAEASPSDKVDIQRELRQRIKSALDVAGV  295


>gi|269929422|ref|YP_003321743.1| MscS Mechanosensitive ion channel [Sphaerobacter thermophilus 
DSM 20745]
 gi|269788779|gb|ACZ40921.1| MscS Mechanosensitive ion channel [Sphaerobacter thermophilus 
DSM 20745]
Length=332

 Score =  149 bits (377),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 88/226 (39%), Positives = 132/226 (59%), Gaps = 7/226 (3%)

Query  67   SDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGF  126
            +D   R  A+K    +A+VI     +LI +V    V+  L V +  L+  A + G A+G 
Sbjct  72   ADTPPRELASKA-NTLANVIESAGRMLILIVAGMMVLSRLGVNIAPLLASAGIAGIAIGL  130

Query  127  GAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVF  186
            GAQ L++DL+ GFFI+ E Q+G GD+V++       +A+G VE ++LR T LR+ +G   
Sbjct  131  GAQSLIKDLIGGFFILFENQFGVGDVVQIG------DASGVVEQLSLRRTGLRAIDGSFI  184

Query  187  TVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEP  246
             VPNG+I    N++KDW+RAVVD+ VP  ADL +V E+L         D ++G+ +L   
Sbjct  185  VVPNGDIRTVTNMTKDWSRAVVDVAVPYDADLNKVIEILQGLVAGLDQDPVVGDAVLGPG  244

Query  247  TVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGI  292
             + GVE +E   V LRL+ +T P +Q+   R+LR  +  A T AGI
Sbjct  245  EITGVEALESTQVKLRLLVKTKPMEQWRVQRELRRRIKDAFTDAGI  290



Lambda     K      H
   0.322    0.136    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 524399257434


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40