BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3104c
Length=308
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610241|ref|NP_217620.1| transmembrane protein [Mycobacteriu... 610 6e-173
gi|15842675|ref|NP_337712.1| hypothetical protein MT3187 [Mycoba... 609 1e-172
gi|308375988|ref|ZP_07668162.1| conserved membrane protein [Myco... 535 4e-150
gi|183981543|ref|YP_001849834.1| transmembrane protein [Mycobact... 523 1e-146
gi|118617903|ref|YP_906235.1| transmembrane protein [Mycobacteri... 503 1e-140
gi|240168636|ref|ZP_04747295.1| hypothetical protein MkanA1_0494... 478 5e-133
gi|342861024|ref|ZP_08717673.1| MscS mechanosensitive ion channe... 435 4e-120
gi|41409272|ref|NP_962108.1| hypothetical protein MAP3174c [Myco... 434 9e-120
gi|254820378|ref|ZP_05225379.1| hypothetical protein MintA_10636... 432 2e-119
gi|296169216|ref|ZP_06850869.1| small conductance mechanosensiti... 432 4e-119
gi|336459372|gb|EGO38315.1| small-conductance mechanosensitive c... 432 5e-119
gi|254776428|ref|ZP_05217944.1| hypothetical protein MaviaA2_174... 431 5e-119
gi|126434178|ref|YP_001069869.1| mechanosensitive ion channel Ms... 415 4e-114
gi|108798579|ref|YP_638776.1| mechanosensitive ion channel MscS ... 415 5e-114
gi|333991484|ref|YP_004524098.1| transmembrane protein [Mycobact... 412 5e-113
gi|120402909|ref|YP_952738.1| mechanosensitive ion channel prote... 398 7e-109
gi|145225029|ref|YP_001135707.1| mechanosensitive ion channel Ms... 395 5e-108
gi|315445398|ref|YP_004078277.1| small-conductance mechanosensit... 394 1e-107
gi|118466985|ref|YP_883158.1| transporter, small conductance mec... 389 3e-106
gi|118473758|ref|YP_886447.1| transporter small conductance mech... 379 3e-103
gi|169630558|ref|YP_001704207.1| mechanosensitive ion channel Ms... 363 2e-98
gi|226305795|ref|YP_002765755.1| MscS family protein [Rhodococcu... 343 3e-92
gi|312140590|ref|YP_004007926.1| mechanosensitive ion channel [R... 341 7e-92
gi|229490967|ref|ZP_04384800.1| MscS Mechanosensitive ion channe... 341 9e-92
gi|111023367|ref|YP_706339.1| hypothetical protein RHA1_ro06405 ... 331 1e-88
gi|296140714|ref|YP_003647957.1| mechanosensitive ion channel Ms... 330 2e-88
gi|54026460|ref|YP_120702.1| putative transporter [Nocardia farc... 321 1e-85
gi|339295940|gb|AEJ48051.1| hypothetical protein CCDC5079_2861 [... 314 1e-83
gi|120401156|ref|YP_950985.1| mechanosensitive ion channel prote... 309 4e-82
gi|158318417|ref|YP_001510925.1| mechanosensitive ion channel Ms... 303 2e-80
gi|284993248|ref|YP_003411803.1| mechanosensitive ion channel Ms... 296 2e-78
gi|288924090|ref|ZP_06418144.1| MscS Mechanosensitive ion channe... 295 6e-78
gi|111224900|ref|YP_715694.1| hypothetical protein FRAAL5535 [Fr... 288 6e-76
gi|343924878|ref|ZP_08764415.1| putative MscS family protein [Go... 285 9e-75
gi|262203334|ref|YP_003274542.1| mechanosensitive ion channel pr... 280 2e-73
gi|326383345|ref|ZP_08205033.1| MscS mechanosensitive ion channe... 259 3e-67
gi|296392774|ref|YP_003657658.1| mechanosensitive ion channel pr... 258 9e-67
gi|317507692|ref|ZP_07965399.1| mechanosensitive ion channel [Se... 254 1e-65
gi|339295939|gb|AEJ48050.1| transmembrane protein [Mycobacterium... 248 8e-64
gi|319951471|ref|ZP_08025280.1| MscS mechanosensitive ion channe... 236 3e-60
gi|295396667|ref|ZP_06806814.1| small conductance mechanosensiti... 172 8e-41
gi|326333761|ref|ZP_08199994.1| transporter, small conductance m... 160 3e-37
gi|311743075|ref|ZP_07716883.1| mechanosensitive ion channel fam... 158 8e-37
gi|269125584|ref|YP_003298954.1| mechanosensitive ion channel Ms... 157 2e-36
gi|332669909|ref|YP_004452917.1| mechanosensitive ion channel Ms... 155 5e-36
gi|302529049|ref|ZP_07281391.1| MscS mechanosensitive ion channe... 155 7e-36
gi|271968587|ref|YP_003342783.1| mechanosensitive ion channel [S... 152 5e-35
gi|134097919|ref|YP_001103580.1| MscS mechanosensitive ion chann... 152 6e-35
gi|84494314|ref|ZP_00993433.1| small-conductance mechanosensitiv... 151 1e-34
gi|269929422|ref|YP_003321743.1| MscS Mechanosensitive ion chann... 149 4e-34
>gi|15610241|ref|NP_217620.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|31794283|ref|NP_856776.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121638989|ref|YP_979213.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
72 more sequence titles
Length=308
Score = 610 bits (1574), Expect = 6e-173, Method: Compositional matrix adjust.
Identities = 308/308 (100%), Positives = 308/308 (100%), Gaps = 0/308 (0%)
Query 1 MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL 60
MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL
Sbjct 1 MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL 60
Query 61 DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL 120
DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL
Sbjct 61 DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL 120
Query 121 GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS 180
GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS
Sbjct 121 GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS 180
Query 181 SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE 240
SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE
Sbjct 181 SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE 240
Query 241 LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA 300
LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA
Sbjct 241 LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA 300
Query 301 AVAESPEQ 308
AVAESPEQ
Sbjct 301 AVAESPEQ 308
>gi|15842675|ref|NP_337712.1| hypothetical protein MT3187 [Mycobacterium tuberculosis CDC1551]
gi|13882994|gb|AAK47526.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|323718335|gb|EGB27513.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
Length=308
Score = 609 bits (1571), Expect = 1e-172, Method: Compositional matrix adjust.
Identities = 307/308 (99%), Positives = 308/308 (100%), Gaps = 0/308 (0%)
Query 1 MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL 60
MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL
Sbjct 1 MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL 60
Query 61 DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL 120
DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL
Sbjct 61 DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL 120
Query 121 GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS 180
GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS
Sbjct 121 GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS 180
Query 181 SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE 240
SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE
Sbjct 181 SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE 240
Query 241 LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA 300
LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFE+GRQLRVLVIRALTRAGIVTAADARA
Sbjct 241 LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFESGRQLRVLVIRALTRAGIVTAADARA 300
Query 301 AVAESPEQ 308
AVAESPEQ
Sbjct 301 AVAESPEQ 308
>gi|308375988|ref|ZP_07668162.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|308377221|ref|ZP_07668461.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|308344661|gb|EFP33512.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|308348611|gb|EFP37462.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
Length=272
Score = 535 bits (1377), Expect = 4e-150, Method: Compositional matrix adjust.
Identities = 272/272 (100%), Positives = 272/272 (100%), Gaps = 0/272 (0%)
Query 37 MLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYV 96
MLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYV
Sbjct 1 MLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYV 60
Query 97 VVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELS 156
VVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELS
Sbjct 61 VVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELS 120
Query 157 MVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSA 216
MVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSA
Sbjct 121 MVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSA 180
Query 217 DLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAG 276
DLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAG
Sbjct 181 DLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAG 240
Query 277 RQLRVLVIRALTRAGIVTAADARAAVAESPEQ 308
RQLRVLVIRALTRAGIVTAADARAAVAESPEQ
Sbjct 241 RQLRVLVIRALTRAGIVTAADARAAVAESPEQ 272
>gi|183981543|ref|YP_001849834.1| transmembrane protein [Mycobacterium marinum M]
gi|183174869|gb|ACC39979.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=328
Score = 523 bits (1347), Expect = 1e-146, Method: Compositional matrix adjust.
Identities = 256/305 (84%), Positives = 287/305 (95%), Gaps = 3/305 (0%)
Query 1 MTTSGTVLAT---SIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVT 57
MTT+ T A S AQ+WH+FWRG+IG+WI+ RGLRIVM+LIAAVLAARFVTW+A RVT
Sbjct 1 MTTNTTAFALATFSPAQYWHDFWRGQIGEWIITRGLRIVMVLIAAVLAARFVTWVAKRVT 60
Query 58 RRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPA 117
+RLDLGFTESDALVRSE +KHRQAVASVISWVSIVLIYV+V+YE++D+LP PVG+LVGPA
Sbjct 61 QRLDLGFTESDALVRSEVSKHRQAVASVISWVSIVLIYVIVLYEIVDILPFPVGSLVGPA 120
Query 118 AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTK 177
AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVE+VTLRVTK
Sbjct 121 AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEEVTLRVTK 180
Query 178 LRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSL 237
LRSS+GEV+TVPNGNIVKS+NLSKDWARAV+DIPVPT ADL RVNEVLH+EC+HAR D++
Sbjct 181 LRSSDGEVYTVPNGNIVKSINLSKDWARAVIDIPVPTGADLNRVNEVLHRECQHAREDAI 240
Query 238 LGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD 297
LG+LLLDEPTVMGVE++E+DTVTLRLVARTLPGKQF AGRQLRVLVIRALT AGI+T AD
Sbjct 241 LGDLLLDEPTVMGVEKLEMDTVTLRLVARTLPGKQFAAGRQLRVLVIRALTGAGIITPAD 300
Query 298 ARAAV 302
A+AAV
Sbjct 301 AQAAV 305
>gi|118617903|ref|YP_906235.1| transmembrane protein [Mycobacterium ulcerans Agy99]
gi|118570013|gb|ABL04764.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99]
Length=328
Score = 503 bits (1296), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 255/305 (84%), Positives = 287/305 (95%), Gaps = 3/305 (0%)
Query 1 MTTSGTVLAT---SIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVT 57
MTT+ T A S AQ+WH+FWRG+IG+WI+ RGLRIVM+LIAAVLAARFVTW+A RVT
Sbjct 1 MTTNTTAFALATFSPAQYWHDFWRGQIGEWIITRGLRIVMVLIAAVLAARFVTWVAKRVT 60
Query 58 RRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPA 117
+RLDLGFTESDALVRSE +KHRQAVASVISWVSIV+IYV+V+YE++D+LP PVG+LVGPA
Sbjct 61 QRLDLGFTESDALVRSEVSKHRQAVASVISWVSIVVIYVIVLYEIVDILPFPVGSLVGPA 120
Query 118 AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTK 177
AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVE+VTLRVTK
Sbjct 121 AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEEVTLRVTK 180
Query 178 LRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSL 237
LRSS+GEV+TVPNGNIVKS+NLSKDWARAV+DIPVPT ADL RVNEVLH+EC+HAR D++
Sbjct 181 LRSSDGEVYTVPNGNIVKSINLSKDWARAVIDIPVPTGADLNRVNEVLHRECQHAREDAI 240
Query 238 LGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD 297
LG+LLLDEPTVMGVE++E+DTVTLRLVARTLPGKQF AGRQLRVLVIRALT AGI+T AD
Sbjct 241 LGDLLLDEPTVMGVEKLEMDTVTLRLVARTLPGKQFAAGRQLRVLVIRALTGAGIITPAD 300
Query 298 ARAAV 302
A+AAV
Sbjct 301 AQAAV 305
>gi|240168636|ref|ZP_04747295.1| hypothetical protein MkanA1_04945 [Mycobacterium kansasii ATCC
12478]
Length=316
Score = 478 bits (1230), Expect = 5e-133, Method: Compositional matrix adjust.
Identities = 237/293 (81%), Positives = 265/293 (91%), Gaps = 0/293 (0%)
Query 12 IAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALV 71
+AQ WH+FWRG IG+WI+ RGLR+VMLLIAAVLAARFV+W+A RVTRRLDLGF ESDALV
Sbjct 1 MAQRWHDFWRGHIGEWIITRGLRVVMLLIAAVLAARFVSWVAQRVTRRLDLGFAESDALV 60
Query 72 RSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRL 131
RSEATKHRQAVASVISWVSIVLI +VVV ++ DVL VG LV PA V+GAALGFGAQ+L
Sbjct 61 RSEATKHRQAVASVISWVSIVLIGIVVVMQIADVLQFSVGGLVAPATVVGAALGFGAQQL 120
Query 132 VQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNG 191
V+DLLAGFFIIVE+QYGFGDLV+L+++GS +A GTVE+VTLRVT+LRS++GEVFTVPNG
Sbjct 121 VRDLLAGFFIIVERQYGFGDLVKLTIMGSATDATGTVENVTLRVTRLRSADGEVFTVPNG 180
Query 192 NIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGV 251
IVKSVNLSKDWARAVVDIPV T+ADL RVNEVLHQECEHAR D++LGELLLD PTVMGV
Sbjct 181 QIVKSVNLSKDWARAVVDIPVSTNADLNRVNEVLHQECEHARDDAVLGELLLDSPTVMGV 240
Query 252 ERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE 304
E IE+DTVTLRLVARTLPGKQFEAGRQLRVLVIRAL RAGIVTAADA + E
Sbjct 241 ESIELDTVTLRLVARTLPGKQFEAGRQLRVLVIRALARAGIVTAADATVGLVE 293
>gi|342861024|ref|ZP_08717673.1| MscS mechanosensitive ion channel [Mycobacterium colombiense
CECT 3035]
gi|342131468|gb|EGT84738.1| MscS mechanosensitive ion channel [Mycobacterium colombiense
CECT 3035]
Length=317
Score = 435 bits (1118), Expect = 4e-120, Method: Compositional matrix adjust.
Identities = 216/295 (74%), Positives = 253/295 (86%), Gaps = 1/295 (0%)
Query 12 IAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALV 71
+ WH+FWRGE+G+WI+ RGLRIVM+LIAAVLAARFV W+A +VT +L+LGF ESDALV
Sbjct 1 MTHRWHDFWRGELGEWIITRGLRIVMILIAAVLAARFVNWVAQQVTHQLNLGFAESDALV 60
Query 72 RSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRL 131
RSEA+KHRQA+ASVISWVS+V+I + V+ ++ VL VG LV PA V+GAALGFGAQ+L
Sbjct 61 RSEASKHRQALASVISWVSVVIIGIWVIMQISSVLQFSVGGLVAPATVVGAALGFGAQQL 120
Query 132 VQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNG 191
V+DLLAGFFI+VE+QYGFGDLV +++V + E A+GTVE+VTLRVT+LRS++GEV T+PNG
Sbjct 121 VRDLLAGFFILVERQYGFGDLVTITVVSATE-ASGTVENVTLRVTRLRSADGEVLTIPNG 179
Query 192 NIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGV 251
IVK VNLSKDWARAVVDIPV TSADL RVNEVLHQEC+ A + +LGELLLD PTVMGV
Sbjct 180 QIVKVVNLSKDWARAVVDIPVSTSADLNRVNEVLHQECDRAMDNPVLGELLLDAPTVMGV 239
Query 252 ERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESP 306
E I VDTVTLRLVARTLPGKQFE GRQLRVLVIRAL R GIVTAADAR + E P
Sbjct 240 ESIAVDTVTLRLVARTLPGKQFEVGRQLRVLVIRALARVGIVTAADARVGLVEDP 294
>gi|41409272|ref|NP_962108.1| hypothetical protein MAP3174c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398092|gb|AAS05722.1| hypothetical protein MAP_3174c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=331
Score = 434 bits (1116), Expect = 9e-120, Method: Compositional matrix adjust.
Identities = 220/307 (72%), Positives = 259/307 (85%), Gaps = 4/307 (1%)
Query 1 MTTSGTVLA---TSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVT 57
MT + +VLA T+ A WH+FWRGE+G+WI+ RGLRIVM+LIAAVLAARFV W+A +V+
Sbjct 1 MTNNTSVLAGAMTTAAHRWHDFWRGELGEWIITRGLRIVMVLIAAVLAARFVNWVALQVS 60
Query 58 RRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPA 117
R+ GF ESDALVRSEA+KHRQAVASVISWVS+V+I + V+ ++ +L VG LV PA
Sbjct 61 RQPTTGFVESDALVRSEASKHRQAVASVISWVSVVIIGIWVMLQIASILQFSVGGLVAPA 120
Query 118 AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTK 177
V+GAALGFGAQ+LV+DLL+GFFI+ E+QYGFGDLV L++V + E A+GTVE+VTLRVT+
Sbjct 121 TVVGAALGFGAQQLVKDLLSGFFILAERQYGFGDLVTLTVVAATE-ASGTVENVTLRVTR 179
Query 178 LRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSL 237
LRS +GEV T+PNG IVK VNLSKDWARAVVDIPV TSADL RVNEVLHQEC+ A + +
Sbjct 180 LRSPDGEVLTIPNGQIVKVVNLSKDWARAVVDIPVSTSADLNRVNEVLHQECDRAMDNPV 239
Query 238 LGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD 297
LG+LLLD PTVMGVE IEVDTVTLRLVARTLPGKQFE GRQLRVLVIRAL RAGIVTAAD
Sbjct 240 LGQLLLDSPTVMGVESIEVDTVTLRLVARTLPGKQFEVGRQLRVLVIRALARAGIVTAAD 299
Query 298 ARAAVAE 304
AR + E
Sbjct 300 ARVGLVE 306
>gi|254820378|ref|ZP_05225379.1| hypothetical protein MintA_10636 [Mycobacterium intracellulare
ATCC 13950]
Length=314
Score = 432 bits (1112), Expect = 2e-119, Method: Compositional matrix adjust.
Identities = 216/288 (75%), Positives = 250/288 (87%), Gaps = 1/288 (0%)
Query 12 IAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALV 71
+ WH+FWRGEIG+WI+ RGLRI M+LIAAVLAARFV W+A +VTR+L+LGF ESDALV
Sbjct 1 MTHRWHDFWRGEIGEWIITRGLRIAMVLIAAVLAARFVNWVAQQVTRQLNLGFAESDALV 60
Query 72 RSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRL 131
RSEA+KHRQAVASVISWVS+V+I + V+ ++ DVL VG LV PA V+GAALGFGAQ+L
Sbjct 61 RSEASKHRQAVASVISWVSVVIIGIWVMLQIADVLQFSVGGLVAPATVVGAALGFGAQQL 120
Query 132 VQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNG 191
V+DLL+GFFI+VE+QYGFGDLV L++V + E A+GTVE+VTLRVT+LRS +GEV T+PNG
Sbjct 121 VRDLLSGFFILVERQYGFGDLVTLTVVAATE-ASGTVENVTLRVTRLRSPDGEVLTIPNG 179
Query 192 NIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGV 251
IVK VNLSKDWARAVVDIPV TSADL RVNEVLHQEC+ A + +LG LLLD PTVMGV
Sbjct 180 QIVKVVNLSKDWARAVVDIPVSTSADLNRVNEVLHQECDRAMDNPVLGALLLDAPTVMGV 239
Query 252 ERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADAR 299
E IEVDTVTLR+VARTLPGKQFE GRQLRVLVIRAL R GIVTAADAR
Sbjct 240 ESIEVDTVTLRMVARTLPGKQFEVGRQLRVLVIRALARVGIVTAADAR 287
>gi|296169216|ref|ZP_06850869.1| small conductance mechanosensitive ion channel family transporter
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896114|gb|EFG75781.1| small conductance mechanosensitive ion channel family transporter
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length=331
Score = 432 bits (1110), Expect = 4e-119, Method: Compositional matrix adjust.
Identities = 220/309 (72%), Positives = 257/309 (84%), Gaps = 4/309 (1%)
Query 1 MTTSGTVLATSI---AQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVT 57
MT + T+LA+ A WH FWRGEIG WI+ RGLRI M+LIAAVLAARFV W+A +VT
Sbjct 1 MTANTTLLASPATINALGWHAFWRGEIGQWIITRGLRIAMVLIAAVLAARFVNWVAQQVT 60
Query 58 RRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPA 117
RR+ LGF SDALV SEA+KHRQA+ASVISWVS+V+I + V+ ++ DVL VG LV PA
Sbjct 61 RRVSLGFAASDALVPSEASKHRQALASVISWVSVVIIGIWVMMQIADVLQFSVGGLVAPA 120
Query 118 AVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTK 177
V+GAALGFGAQ+LV+DLL+GFFI+ E+QYGFGDLV L++V + E A+GTVE+VTLRVT+
Sbjct 121 TVVGAALGFGAQQLVKDLLSGFFILAERQYGFGDLVTLTVVAATE-ASGTVENVTLRVTR 179
Query 178 LRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSL 237
LRS++GEV T+PNG IVK VNLSKDWARAVVDIPV TSADL RVNEVLHQEC+ A + L
Sbjct 180 LRSADGEVLTIPNGQIVKVVNLSKDWARAVVDIPVSTSADLNRVNEVLHQECDRAMDNPL 239
Query 238 LGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD 297
LG+LLLD PTVMGVE IE+DTVTLRLVARTLPGKQFEAGRQLRVLVIRAL R GIVT+AD
Sbjct 240 LGDLLLDAPTVMGVESIELDTVTLRLVARTLPGKQFEAGRQLRVLVIRALARVGIVTSAD 299
Query 298 ARAAVAESP 306
A + E P
Sbjct 300 ATVGLVEDP 308
>gi|336459372|gb|EGO38315.1| small-conductance mechanosensitive channel [Mycobacterium avium
subsp. paratuberculosis S397]
Length=320
Score = 432 bits (1110), Expect = 5e-119, Method: Compositional matrix adjust.
Identities = 215/295 (73%), Positives = 252/295 (86%), Gaps = 1/295 (0%)
Query 10 TSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDA 69
T+ A WH+FWRGE+G+WI+ RGLRIVM+LIAAVLAARFV W+A +V+R+L GF ESDA
Sbjct 2 TTAAHRWHDFWRGELGEWIITRGLRIVMVLIAAVLAARFVNWVALQVSRQLTTGFVESDA 61
Query 70 LVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQ 129
LVRSEA+KHRQAVASVISWVS+V+I + V+ ++ +L VG L PA V+GAALGFGAQ
Sbjct 62 LVRSEASKHRQAVASVISWVSVVIIGIWVMLQIASILQFSVGGLAAPATVVGAALGFGAQ 121
Query 130 RLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVP 189
+LV+DLL+GFFI+ E+QYGFGDLV L++V + E A+GTVE+VTLRVT+LRS +GEV T+P
Sbjct 122 QLVKDLLSGFFILAERQYGFGDLVTLTVVAATE-ASGTVENVTLRVTRLRSPDGEVLTIP 180
Query 190 NGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVM 249
NG IVK VNLSKDWARAVVDIPV TSADL RVNEVLHQEC+ A + +LG+LLLD PTVM
Sbjct 181 NGQIVKVVNLSKDWARAVVDIPVSTSADLNRVNEVLHQECDRAMDNPVLGQLLLDSPTVM 240
Query 250 GVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE 304
GVE IEVDTVTLRLVARTLPGKQFE GRQLRVLVIRAL RAGIVTAADAR + E
Sbjct 241 GVESIEVDTVTLRLVARTLPGKQFEVGRQLRVLVIRALARAGIVTAADARVGLVE 295
>gi|254776428|ref|ZP_05217944.1| hypothetical protein MaviaA2_17414 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=324
Score = 431 bits (1109), Expect = 5e-119, Method: Compositional matrix adjust.
Identities = 215/295 (73%), Positives = 253/295 (86%), Gaps = 1/295 (0%)
Query 10 TSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDA 69
T+ A WH+FWRGE+G+WI+ RGLRIVM+LIAAVLAARFV W+A +V+R+L GF ESDA
Sbjct 2 TTAAHRWHDFWRGELGEWIITRGLRIVMVLIAAVLAARFVNWVALQVSRQLTTGFVESDA 61
Query 70 LVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQ 129
LVRSEA+KHRQAVASVISWVS+V+I + V+ ++ +L VG LV PA V+GAALGFGAQ
Sbjct 62 LVRSEASKHRQAVASVISWVSVVIIGIWVMLQIASILQFSVGGLVAPATVVGAALGFGAQ 121
Query 130 RLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVP 189
+LV+DLL+GFFI+ E+QYGFGDLV L++V + E A+GTVE+VTLRVT+LRS +GEV T+P
Sbjct 122 QLVKDLLSGFFILAERQYGFGDLVTLTVVAATE-ASGTVENVTLRVTRLRSPDGEVLTIP 180
Query 190 NGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVM 249
NG IVK VNLSKDWARAVVDIPV T+ADL RVNEVLHQEC+ A + +LG+LLLD PTVM
Sbjct 181 NGQIVKVVNLSKDWARAVVDIPVSTTADLNRVNEVLHQECDRAMDNPVLGQLLLDSPTVM 240
Query 250 GVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE 304
GVE IEVDTVTLRLVARTLPGKQFE GRQLRVLVIRAL RAGIVTAADAR + E
Sbjct 241 GVESIEVDTVTLRLVARTLPGKQFEVGRQLRVLVIRALARAGIVTAADARVGLVE 295
>gi|126434178|ref|YP_001069869.1| mechanosensitive ion channel MscS [Mycobacterium sp. JLS]
gi|126233978|gb|ABN97378.1| MscS Mechanosensitive ion channel [Mycobacterium sp. JLS]
Length=319
Score = 415 bits (1067), Expect = 4e-114, Method: Compositional matrix adjust.
Identities = 209/313 (67%), Positives = 251/313 (81%), Gaps = 6/313 (1%)
Query 1 MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL 60
MTTS T LA A+ WH+FW G+IG W++ RGL+I +L+I A+L ARF+ W+A RVTRR+
Sbjct 1 MTTS-TTLAIGFAEGWHDFWHGDIGVWVMTRGLQIALLVIGALLGARFINWVARRVTRRI 59
Query 61 DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL 120
D + ESD LVRSE+ KHRQAVASVISWVSI +++VVV ++ VL +PVG+LV PAAVL
Sbjct 60 DAEYQESDQLVRSESAKHRQAVASVISWVSIAVLFVVVGMQITAVLNIPVGSLVAPAAVL 119
Query 121 GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS 180
GAALGFGAQ+LVQDLLAGFFII E+QYGFGDLV+L+M+G+ + A GTVE+VTLRVTKLR+
Sbjct 120 GAALGFGAQKLVQDLLAGFFIITERQYGFGDLVQLNMIGATDAAEGTVEEVTLRVTKLRT 179
Query 181 SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE 240
SEGEVFTVPNGNIV+S+N+SKDWARAVVDIPVPT+ADL VNE+LH+ E A D L
Sbjct 180 SEGEVFTVPNGNIVRSLNMSKDWARAVVDIPVPTTADLNDVNELLHRVGEDAMDDVKLSA 239
Query 241 LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVT-----A 295
LLLD P +MGVE IEVDTV LR+VARTLPGKQFE GR+LR+ +I ALTRAGI T
Sbjct 240 LLLDTPQLMGVESIEVDTVNLRMVARTLPGKQFEVGRRLRIRIIAALTRAGIATKDHTPK 299
Query 296 ADARAAVAESPEQ 308
D A E+P Q
Sbjct 300 VDTIAGHGEAPPQ 312
>gi|108798579|ref|YP_638776.1| mechanosensitive ion channel MscS [Mycobacterium sp. MCS]
gi|119867679|ref|YP_937631.1| mechanosensitive ion channel MscS [Mycobacterium sp. KMS]
gi|108768998|gb|ABG07720.1| MscS Mechanosensitive ion channel [Mycobacterium sp. MCS]
gi|119693768|gb|ABL90841.1| MscS Mechanosensitive ion channel [Mycobacterium sp. KMS]
Length=319
Score = 415 bits (1066), Expect = 5e-114, Method: Compositional matrix adjust.
Identities = 209/313 (67%), Positives = 251/313 (81%), Gaps = 6/313 (1%)
Query 1 MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL 60
MTTS T LA A+ WH+FW G+IG W++ RGL+I +L+I A+L ARF+ W+A RVTRR+
Sbjct 1 MTTS-TTLAIGFAEGWHDFWHGDIGVWVMTRGLQIALLVIGALLGARFINWVARRVTRRI 59
Query 61 DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL 120
D + ESD LVRSE+ KHRQAVASVISWVSI +++VVV ++ VL +PVG+LV PAAVL
Sbjct 60 DAEYQESDQLVRSESAKHRQAVASVISWVSIAVLFVVVGMQITAVLNIPVGSLVAPAAVL 119
Query 121 GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS 180
GAALGFGAQ+LVQDLLAGFFII E+QYGFGDLV+L+M+G+ + A GTVE+VTLRVTKLR+
Sbjct 120 GAALGFGAQKLVQDLLAGFFIITERQYGFGDLVQLNMIGATDAAEGTVEEVTLRVTKLRT 179
Query 181 SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE 240
SEGEVFTVPNGNIV+S+N+SKDWARAVVDIPVPT+ADL VNE+LH+ E A D L
Sbjct 180 SEGEVFTVPNGNIVRSLNMSKDWARAVVDIPVPTTADLNDVNELLHRVGEDAMDDVKLSA 239
Query 241 LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVT-----A 295
LLLD P +MGVE IEVDTV LR+VARTLPGKQFE GR+LR+ +I ALTRAGI T
Sbjct 240 LLLDTPQLMGVESIEVDTVNLRMVARTLPGKQFEVGRRLRIRIIAALTRAGIATKDHTPK 299
Query 296 ADARAAVAESPEQ 308
D A E+P Q
Sbjct 300 VDTIAGHGEAPPQ 312
>gi|333991484|ref|YP_004524098.1| transmembrane protein [Mycobacterium sp. JDM601]
gi|333487452|gb|AEF36844.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=300
Score = 412 bits (1058), Expect = 5e-113, Method: Compositional matrix adjust.
Identities = 209/301 (70%), Positives = 255/301 (85%), Gaps = 3/301 (0%)
Query 7 VLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTE 66
VLA S Q WH+ W GEIG W++++GLRIV+LLI AVLA+RF+TW A RVTRRL+LGF
Sbjct 2 VLAFSPGQRWHDAWSGEIGQWVIDKGLRIVLLLIGAVLASRFITWAARRVTRRLELGFQT 61
Query 67 SDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGF 126
SDALVRSEA+KHRQAVASVISWVS+V++ VVV ++ +L +P+G+LVGPAAV+G A+GF
Sbjct 62 SDALVRSEASKHRQAVASVISWVSVVMLCVVVAVQITGILDIPIGSLVGPAAVIGGAIGF 121
Query 127 GAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVF 186
GAQ+LVQDLL+GFFII E+QYGFGDLV+LSM+G+ A GTVEDVTLRVTKLR+++GEVF
Sbjct 122 GAQKLVQDLLSGFFIITERQYGFGDLVQLSMIGASVEALGTVEDVTLRVTKLRTADGEVF 181
Query 187 TVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARH-DSLLGELLLDE 245
TVPNGNIV+S+NLSKDWARAVVDIPVPTSADL RVNEVLHQ CE+A D+ L +LLLD
Sbjct 182 TVPNGNIVRSLNLSKDWARAVVDIPVPTSADLNRVNEVLHQVCENAMEADAPLRDLLLDT 241
Query 246 PTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAES 305
P++MGVE IE+ V LR+VARTLPGKQFE GR+LR+ V+RAL AG+VTA + + E+
Sbjct 242 PSIMGVESIELGVVNLRMVARTLPGKQFEVGRRLRIQVVRALASAGVVTAGEVQP--VET 299
Query 306 P 306
P
Sbjct 300 P 300
>gi|120402909|ref|YP_952738.1| mechanosensitive ion channel protein MscS [Mycobacterium vanbaalenii
PYR-1]
gi|119955727|gb|ABM12732.1| MscS Mechanosensitive ion channel [Mycobacterium vanbaalenii
PYR-1]
Length=325
Score = 398 bits (1022), Expect = 7e-109, Method: Compositional matrix adjust.
Identities = 202/296 (69%), Positives = 242/296 (82%), Gaps = 0/296 (0%)
Query 3 TSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDL 62
TS +LA +A WH FWRG+IG WIL+RG+RI +LLI +LAARF+ W A R+TRR+D
Sbjct 2 TSNRLLAFDLASRWHGFWRGDIGVWILDRGVRIALLLIGGLLAARFINWAAQRITRRIDA 61
Query 63 GFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGA 122
+ ESD LVRSE+ KHRQAVASVISWVS+ L++V+V ++ D+L +P+G+LV PAAV+GA
Sbjct 62 EYQESDQLVRSESAKHRQAVASVISWVSVALLFVMVAVQITDILAIPIGSLVAPAAVIGA 121
Query 123 ALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSE 182
ALGFGAQRLVQDLL+GFFII EKQYGFGDLV L++ G A GTVEDVTLRVTKLRS+E
Sbjct 122 ALGFGAQRLVQDLLSGFFIITEKQYGFGDLVALTVSGIAAPAEGTVEDVTLRVTKLRSAE 181
Query 183 GEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELL 242
GE+FT+PNG IVK+VNLSKDWARAV+DIPVPTSADL VN+VLH + A DS L +LL
Sbjct 182 GEMFTIPNGQIVKTVNLSKDWARAVIDIPVPTSADLNLVNDVLHDVAQKAIDDSQLHDLL 241
Query 243 LDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADA 298
LD P +MGVE IE+DTV LR+VARTLPGKQFE GR+LRVLVIR L R+GIV +A
Sbjct 242 LDPPQLMGVESIELDTVNLRMVARTLPGKQFEVGRRLRVLVIRELRRSGIVAPGEA 297
>gi|145225029|ref|YP_001135707.1| mechanosensitive ion channel MscS [Mycobacterium gilvum PYR-GCK]
gi|145217515|gb|ABP46919.1| MscS Mechanosensitive ion channel [Mycobacterium gilvum PYR-GCK]
Length=334
Score = 395 bits (1015), Expect = 5e-108, Method: Compositional matrix adjust.
Identities = 200/294 (69%), Positives = 242/294 (83%), Gaps = 0/294 (0%)
Query 1 MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL 60
+T + TVLA +A W FW+G+ G WIL RG+ I +LLI +LAARF+ W A R+TRR+
Sbjct 10 ITLNTTVLAFDMAGAWRGFWQGDTGVWILGRGVPIALLLIGGLLAARFINWSARRITRRI 69
Query 61 DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL 120
D + ESD LVR+E+ KHRQAVASVISWVS+ L++V+V ++ D+L +P+G+LV PAAV+
Sbjct 70 DAQYLESDQLVRTESAKHRQAVASVISWVSVALLFVMVAVQITDILAIPIGSLVAPAAVI 129
Query 121 GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS 180
GAALGFGAQ+LVQDLLAGFFII E+QYGFGDLVEL+MVG+P+ A GTVE+VTLRVTKLR+
Sbjct 130 GAALGFGAQKLVQDLLAGFFIITERQYGFGDLVELNMVGAPQAAQGTVEEVTLRVTKLRT 189
Query 181 SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE 240
SEGEVFTVPNGNIV+S+N+SKDWARAVVDIPVPT+ DL RVNEVLH+ E A D L
Sbjct 190 SEGEVFTVPNGNIVQSLNMSKDWARAVVDIPVPTTVDLNRVNEVLHRVGETAMQDDELRA 249
Query 241 LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVT 294
LLLD P +MGVE IEVDTV LR+VARTLPGKQFE GR+LR+L+I AL AGI T
Sbjct 250 LLLDTPQLMGVESIEVDTVNLRMVARTLPGKQFEVGRRLRILIIAALAGAGIST 303
>gi|315445398|ref|YP_004078277.1| small-conductance mechanosensitive channel [Mycobacterium sp.
Spyr1]
gi|315263701|gb|ADU00443.1| small-conductance mechanosensitive channel [Mycobacterium sp.
Spyr1]
Length=323
Score = 394 bits (1011), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 199/289 (69%), Positives = 239/289 (83%), Gaps = 0/289 (0%)
Query 6 TVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFT 65
TVLA +A W FW+G+ G WIL RG+ I +LLI +LAARF+ W A R+TRR+D +
Sbjct 4 TVLAFDMAGAWRGFWQGDTGVWILGRGVPIALLLIGGLLAARFINWSARRITRRIDAQYL 63
Query 66 ESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALG 125
ESD LVR+E+ KHRQAVASVISWVS+ L++V+V ++ D+L +P+G+LV PAAV+GAALG
Sbjct 64 ESDQLVRTESAKHRQAVASVISWVSVALLFVMVAVQITDILAIPIGSLVAPAAVIGAALG 123
Query 126 FGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEV 185
FGAQ+LVQDLLAGFFII E+QYGFGDLVEL+MVG+P+ A GTVE+VTLRVTKLR+SEGEV
Sbjct 124 FGAQKLVQDLLAGFFIITERQYGFGDLVELNMVGAPQAAQGTVEEVTLRVTKLRTSEGEV 183
Query 186 FTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDE 245
FTVPNGNIV+S+N+SKDWARAVVDIPVPT+ DL RVNEVLH+ E A D L LLLD
Sbjct 184 FTVPNGNIVQSLNMSKDWARAVVDIPVPTTVDLNRVNEVLHRVGETAMQDDELRALLLDT 243
Query 246 PTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVT 294
P +MGVE IEVDTV LR+VARTLPGKQFE GR+LR+L+I AL AGI T
Sbjct 244 PQLMGVESIEVDTVNLRMVARTLPGKQFEVGRRLRILIIAALAGAGIST 292
>gi|118466985|ref|YP_883158.1| transporter, small conductance mechanosensitive ion channel (MscS)
family protein [Mycobacterium avium 104]
gi|118168272|gb|ABK69169.1| transporter, small conductance mechanosensitive ion channel (MscS)
family protein [Mycobacterium avium 104]
Length=292
Score = 389 bits (999), Expect = 3e-106, Method: Compositional matrix adjust.
Identities = 198/268 (74%), Positives = 230/268 (86%), Gaps = 1/268 (0%)
Query 37 MLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYV 96
M+LIAAVLAARFV W+A +V+R+L GF ESDALVRSEA+KHRQAVASVISWVS+V+I +
Sbjct 1 MVLIAAVLAARFVNWVALQVSRQLTTGFVESDALVRSEASKHRQAVASVISWVSVVIIGI 60
Query 97 VVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELS 156
V+ ++ +L VG LV PA V+GAALGFGAQ+LV+DLL+GFFI+ E+QYGFGDLV L+
Sbjct 61 WVMLQIASILQFSVGGLVAPATVVGAALGFGAQQLVKDLLSGFFILAERQYGFGDLVTLT 120
Query 157 MVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSA 216
+V + E A+GTVE+VTLRVT+LRS +GEV T+PNG IVK VNLSKDWARAVVDIPV TSA
Sbjct 121 VVAATE-ASGTVENVTLRVTRLRSPDGEVLTIPNGQIVKVVNLSKDWARAVVDIPVSTSA 179
Query 217 DLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAG 276
DL RVNEVLHQEC+ A + +LG+LLLD PTVMGVE IEVDTVTLRLVARTLPGKQFE G
Sbjct 180 DLNRVNEVLHQECDRAMDNPVLGQLLLDSPTVMGVESIEVDTVTLRLVARTLPGKQFEVG 239
Query 277 RQLRVLVIRALTRAGIVTAADARAAVAE 304
RQLRVLVIRAL RAGIVTAADAR + E
Sbjct 240 RQLRVLVIRALARAGIVTAADARVGLVE 267
>gi|118473758|ref|YP_886447.1| transporter small conductance mechanosensitive ion channel (MscS)
family protein [Mycobacterium smegmatis str. MC2 155]
gi|118175045|gb|ABK75941.1| transporter, small conductance mechanosensitive ion channel (MscS)
family protein [Mycobacterium smegmatis str. MC2 155]
Length=326
Score = 379 bits (974), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 207/302 (69%), Positives = 248/302 (83%), Gaps = 1/302 (0%)
Query 2 TTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLD 61
+++ TVLA S+A WH+FW GEIG WIL +GLRI +LLI +LAARF++W A RV RR+D
Sbjct 5 SSAATVLAFSVADRWHDFWHGEIGVWILTKGLRIALLLIGGLLAARFISWAAQRVVRRID 64
Query 62 LGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLG 121
+ ESD LVRSE+ KHRQAVASVISWVS+ L++V+V+ EV DVL VPV +LV PAAVLG
Sbjct 65 AEYQESDQLVRSESAKHRQAVASVISWVSVALLFVIVLVEVTDVLAVPVASLVAPAAVLG 124
Query 122 AALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSS 181
AALGFGAQR+VQDLLAGFFII EKQYGFGDLV L+ +G+ A GTVEDVTLRVTKLRS+
Sbjct 125 AALGFGAQRIVQDLLAGFFIITEKQYGFGDLVRLT-IGASNEAEGTVEDVTLRVTKLRST 183
Query 182 EGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGEL 241
EGE++TVPNG IVKS+NLSKDWARAVVDIPV S DL VN+VL++ E A D+ L +L
Sbjct 184 EGEMYTVPNGQIVKSLNLSKDWARAVVDIPVSVSVDLNVVNDVLNEVAERATEDAELSKL 243
Query 242 LLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAA 301
+LD+P +MGVE I VDTV LR+VARTLPGKQFE GR+LRV V+RAL RAG+VT++DA A
Sbjct 244 VLDKPQLMGVESIGVDTVNLRMVARTLPGKQFEVGRRLRVRVVRALRRAGVVTSSDASVA 303
Query 302 VA 303
A
Sbjct 304 AA 305
>gi|169630558|ref|YP_001704207.1| mechanosensitive ion channel MscS [Mycobacterium abscessus ATCC
19977]
gi|169242525|emb|CAM63553.1| MscS Mechanosensitive ion channel [Mycobacterium abscessus]
Length=350
Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/291 (63%), Positives = 229/291 (79%), Gaps = 0/291 (0%)
Query 12 IAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALV 71
+A+ W++FW +IG W+L+ GL+IV+ ++ A++ RF+ W A ++TRRLD FT+SDALV
Sbjct 14 LAERWNSFWSSQIGRWLLDNGLQIVIAILGAMILVRFINWGAQKITRRLDRSFTQSDALV 73
Query 72 RSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRL 131
RSEA+KHRQA+ASVISW+ +VL+ V+ V+ VL + VG L GPAAVLG ALGFGAQR+
Sbjct 74 RSEASKHRQALASVISWIIVVLVVVLTTVHVVGVLGISVGGLAGPAAVLGGALGFGAQRV 133
Query 132 VQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNG 191
VQDLL+GFF+I EKQYGFGDLVEL + G + GTVE+VTLRVTKLRS +GEV T+PNG
Sbjct 134 VQDLLSGFFLITEKQYGFGDLVELYVQGQTTESRGTVEEVTLRVTKLRSGDGEVITIPNG 193
Query 192 NIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGV 251
IVK+VNLSKDWARAVVDIPVPTS DL RVN+VL+ C+ A D L +LLLD P++MGV
Sbjct 194 LIVKAVNLSKDWARAVVDIPVPTSVDLARVNDVLYDVCQQALVDRDLSQLLLDAPSLMGV 253
Query 252 ERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAV 302
E IEVD V +R+VARTLPGKQFE GR+LR VI AL +AG+ D+R V
Sbjct 254 ESIEVDRVNVRMVARTLPGKQFEVGRRLRAKVIAALAKAGVALVGDSRPTV 304
>gi|226305795|ref|YP_002765755.1| MscS family protein [Rhodococcus erythropolis PR4]
gi|226184912|dbj|BAH33016.1| putative MscS family protein [Rhodococcus erythropolis PR4]
Length=294
Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 169/283 (60%), Positives = 212/283 (75%), Gaps = 0/283 (0%)
Query 26 DWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASV 85
DW+ GL ++M ++ A++ AR V+W N+VT ++D + DALVRSEATKHR +VA V
Sbjct 12 DWLQTTGLSVLMTVLGAMILARLVSWGGNKVTDQIDSNYQLGDALVRSEATKHRHSVAQV 71
Query 86 ISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEK 145
I+WV I IYV+ +V+D L +P+G+LV PA VLGAALGFGAQR+VQD+LAGFFII E+
Sbjct 72 ITWVVITFIYVIATLKVLDQLNLPIGSLVAPATVLGAALGFGAQRVVQDILAGFFIITER 131
Query 146 QYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWAR 205
QYGFGD V L++ GS ++A G +EDVTLRVT++R+S+GEV TVPNG IVK+ NLSKDWAR
Sbjct 132 QYGFGDTVRLAITGSSDDAEGVIEDVTLRVTRMRNSDGEVITVPNGQIVKATNLSKDWAR 191
Query 206 AVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVA 265
AV+D+PVP +ADL RVNEVL Q A D L +LLLDEPTVMGVE +EVD V +R+VA
Sbjct 192 AVIDVPVPATADLTRVNEVLRQVGVDAMADRGLKKLLLDEPTVMGVESLEVDQVNVRMVA 251
Query 266 RTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESPEQ 308
RTLPGKQF+ GR LRV V AL R GI + D A E +
Sbjct 252 RTLPGKQFQVGRALRVRVAAALRRQGITVSPDLHTARTEEASE 294
>gi|312140590|ref|YP_004007926.1| mechanosensitive ion channel [Rhodococcus equi 103S]
gi|325675788|ref|ZP_08155472.1| small conductance mechanosensitive ion channel family transporter
[Rhodococcus equi ATCC 33707]
gi|311889929|emb|CBH49246.1| putative mechanosensitive ion channel [Rhodococcus equi 103S]
gi|325553759|gb|EGD23437.1| small conductance mechanosensitive ion channel family transporter
[Rhodococcus equi ATCC 33707]
Length=301
Score = 341 bits (875), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 165/275 (60%), Positives = 215/275 (79%), Gaps = 0/275 (0%)
Query 26 DWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASV 85
DW+ GL I + ++ AV+ ARFV W R+T+R+D + + DALVRSEATKHR +VA V
Sbjct 18 DWLKVTGLPIALTVLGAVILARFVNWAGGRITQRIDDNYQQGDALVRSEATKHRHSVAQV 77
Query 86 ISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEK 145
I+WV I +IYV+ +V+++L +P+G+LV PA VLGAALGFGAQR+VQD+LAGFFII E+
Sbjct 78 ITWVVITIIYVITAMKVLNLLGLPIGSLVAPATVLGAALGFGAQRVVQDILAGFFIITER 137
Query 146 QYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWAR 205
QYGFGD V++++ GS +A G +EDVTLRVT++R+++GEV TVPNG IVK+VNLSKDWAR
Sbjct 138 QYGFGDTVQIAITGSGTDAEGVIEDVTLRVTRMRNADGEVITVPNGQIVKAVNLSKDWAR 197
Query 206 AVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVA 265
AVVD+P+P SAD+ RVN++LH+ A D L LLLD P+VMGVE + VD V++R+VA
Sbjct 198 AVVDVPIPASADINRVNDILHRVGVDAYEDKSLRPLLLDTPSVMGVESLAVDQVSVRMVA 257
Query 266 RTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA 300
RTLPGKQF+ GR LRV V+ AL RAGI AA+ A
Sbjct 258 RTLPGKQFQVGRALRVRVVTALRRAGITVAAELEA 292
>gi|229490967|ref|ZP_04384800.1| MscS Mechanosensitive ion channel [Rhodococcus erythropolis SK121]
gi|229322083|gb|EEN87871.1| MscS Mechanosensitive ion channel [Rhodococcus erythropolis SK121]
Length=294
Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 167/272 (62%), Positives = 209/272 (77%), Gaps = 0/272 (0%)
Query 26 DWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASV 85
DW+ GL ++M ++ A++ AR V+W N+VT ++D + DALVRSEATKHR +VA V
Sbjct 12 DWLQTTGLSVLMTVLGAMILARLVSWGGNKVTDQIDSNYQLGDALVRSEATKHRHSVAQV 71
Query 86 ISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEK 145
I+WV I IYV+ +V+D L +P+G+LV PA VLGAALGFGAQR+VQD+LAGFFII E+
Sbjct 72 ITWVVITFIYVIATLKVLDQLNLPIGSLVAPATVLGAALGFGAQRVVQDILAGFFIITER 131
Query 146 QYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWAR 205
QYGFGD V L++ GS ++A G +EDVTLRVT++R+S+GEV TVPNG IVK+ NLSKDWAR
Sbjct 132 QYGFGDTVRLAITGSSDDAEGVIEDVTLRVTRMRNSDGEVITVPNGQIVKATNLSKDWAR 191
Query 206 AVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVA 265
AV+D+PVP +ADL RVNEVL Q A D L +LLLDEPTVMGVE +EVD V +R+VA
Sbjct 192 AVIDVPVPATADLTRVNEVLRQVGVDAMADRGLKKLLLDEPTVMGVESLEVDQVNVRMVA 251
Query 266 RTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD 297
RTLPGKQF+ GR LRV V AL R GI + D
Sbjct 252 RTLPGKQFQVGRALRVRVAAALRRQGITVSPD 283
>gi|111023367|ref|YP_706339.1| hypothetical protein RHA1_ro06405 [Rhodococcus jostii RHA1]
gi|226365871|ref|YP_002783654.1| MscS family transporter [Rhodococcus opacus B4]
gi|110822897|gb|ABG98181.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
gi|226244361|dbj|BAH54709.1| putative MscS family transporter [Rhodococcus opacus B4]
Length=298
Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/282 (60%), Positives = 217/282 (77%), Gaps = 3/282 (1%)
Query 26 DWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASV 85
DW+ + GL + + ++ A+L ARFV W ++VT R+D + + DALVRSEATKHR +VA V
Sbjct 16 DWLSSTGLAVSLTVLGAILMARFVNWGGSKVTDRIDSNYMQGDALVRSEATKHRHSVAQV 75
Query 86 ISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEK 145
I+WV I +IYV+ +V+D L +P+G+LV PA VLGAALGFGAQR+VQD+LAGFFII E+
Sbjct 76 ITWVIITIIYVIATMKVLDQLSLPIGSLVAPATVLGAALGFGAQRVVQDILAGFFIITER 135
Query 146 QYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWAR 205
QYGFGD V+L++ GS E+A G +EDVTLRVT++R+S+GEV TVPNG IVK++NLSKDWAR
Sbjct 136 QYGFGDTVQLAVTGSSEDAEGVIEDVTLRVTRMRNSDGEVITVPNGQIVKAINLSKDWAR 195
Query 206 AVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVA 265
AV+D+PVP ++D+ RVNEVLHQ A D L +LLLDEPTVMGVE + VD V++R+VA
Sbjct 196 AVIDVPVPATSDINRVNEVLHQVGVEAFADRGLKKLLLDEPTVMGVESLTVDEVSVRVVA 255
Query 266 RTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD---ARAAVAE 304
RTLPGKQF+ GR LRV + A+ R GI D RAA E
Sbjct 256 RTLPGKQFQVGRALRVRIATAMRRQGITVEPDLQTVRAAEGE 297
>gi|296140714|ref|YP_003647957.1| mechanosensitive ion channel MscS [Tsukamurella paurometabola
DSM 20162]
gi|296028848|gb|ADG79618.1| MscS Mechanosensitive ion channel [Tsukamurella paurometabola
DSM 20162]
Length=309
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/265 (63%), Positives = 203/265 (77%), Gaps = 1/265 (0%)
Query 28 ILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVIS 87
+ R L I + IAAVLA RFV W + RVT R+D F SD+LVRSE+ KH+ AV VIS
Sbjct 22 MFERVLPIALWSIAAVLANRFVNWASARVTMRIDAEFKNSDSLVRSESAKHQHAVIQVIS 81
Query 88 WVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQY 147
WV+I IY++ Y++I L VP+ ALV PA V+GAALGFGAQR+VQDLLAGFF+I E+QY
Sbjct 82 WVAIAAIYLLAGYQIIVALGVPITALVAPATVIGAALGFGAQRVVQDLLAGFFLITERQY 141
Query 148 GFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAV 207
GFGD+V L++ G A GTVEDVTLRVTKLR+++GEV TVPNG +VK+ NLSKDWARAV
Sbjct 142 GFGDVVNLALTGG-STAEGTVEDVTLRVTKLRNTDGEVITVPNGQVVKATNLSKDWARAV 200
Query 208 VDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVART 267
VDIP+PT+ DLG+VN +LH E A D + LLLDEP+VMGVE I++D V +R+VART
Sbjct 201 VDIPLPTTVDLGKVNALLHTVGERAFQDPYMSTLLLDEPSVMGVESIDLDQVNMRMVART 260
Query 268 LPGKQFEAGRQLRVLVIRALTRAGI 292
LPGKQFE GR LR ++R+L AGI
Sbjct 261 LPGKQFEVGRNLRERIVRSLATAGI 285
>gi|54026460|ref|YP_120702.1| putative transporter [Nocardia farcinica IFM 10152]
gi|54017968|dbj|BAD59338.1| putative transporter [Nocardia farcinica IFM 10152]
Length=282
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/266 (60%), Positives = 203/266 (77%), Gaps = 0/266 (0%)
Query 27 WILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVI 86
W+ + GL IV+L++ A+L +RF T++ +R+T ++D GF DALVR+EA KHR A+A V+
Sbjct 13 WLRSNGLEIVLLILGAMLFSRFATYVRDRITAKIDAGFRGGDALVRTEAAKHRHALAQVL 72
Query 87 SWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQ 146
+WV + + YV+V EV+ L V LV PAAVLGAALGFGAQR+VQD+LAGFF+I E+Q
Sbjct 73 TWVVLTIAYVLVGMEVLQRLGFQVTGLVAPAAVLGAALGFGAQRIVQDILAGFFLITERQ 132
Query 147 YGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARA 206
YGFGD+V +++ GS E A GTVEDVTLR+T LR+++GEV TVPNG IVK NLSKDWARA
Sbjct 133 YGFGDVVRIAVTGSAEMAEGTVEDVTLRITTLRNADGEVITVPNGQIVKVTNLSKDWARA 192
Query 207 VVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVAR 266
+D+PV SAD+ RVNE+LH+ A D L LLLDEPTVMG++ + VD + +R+VAR
Sbjct 193 AIDVPVAASADITRVNEILHKVGAEAFRDPRLEPLLLDEPTVMGLDDLSVDQMNIRMVAR 252
Query 267 TLPGKQFEAGRQLRVLVIRALTRAGI 292
TLPGKQFE GR+LRV V AL R GI
Sbjct 253 TLPGKQFEVGRELRVRVASALRREGI 278
>gi|339295940|gb|AEJ48051.1| hypothetical protein CCDC5079_2861 [Mycobacterium tuberculosis
CCDC5079]
Length=183
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/183 (97%), Positives = 178/183 (98%), Gaps = 0/183 (0%)
Query 1 MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL 60
MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL
Sbjct 1 MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL 60
Query 61 DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL 120
DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL
Sbjct 61 DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL 120
Query 121 GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS 180
GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVT+
Sbjct 121 GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTQAAF 180
Query 181 SEG 183
G
Sbjct 181 QRG 183
>gi|120401156|ref|YP_950985.1| mechanosensitive ion channel protein MscS [Mycobacterium vanbaalenii
PYR-1]
gi|119953974|gb|ABM10979.1| MscS Mechanosensitive ion channel [Mycobacterium vanbaalenii
PYR-1]
Length=275
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 167/273 (62%), Positives = 208/273 (77%), Gaps = 2/273 (0%)
Query 24 IGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVA 83
+G WI+ GL I M+++ A++ R + W A RV+RR+ G + + VRSE KHRQAVA
Sbjct 5 VGQWIMTTGLHIAMVVVFALVVTRAIRWAAERVSRRIADG-DDREPTVRSETVKHRQAVA 63
Query 84 SVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIV 143
+ S V+I ++YV+V ++ + L +P+ +LV PAAVLGAALGFGAQRLVQDLL+GFF+I
Sbjct 64 AATSSVAIGVLYVLVALDIANQLGLPIASLVAPAAVLGAALGFGAQRLVQDLLSGFFVIS 123
Query 144 EKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDW 203
EKQYGFGDLVEL+ V + A GTVE VTLRVTKLR+SEGEV+TVPNG I KS NLSKDW
Sbjct 124 EKQYGFGDLVELT-VSAGGTATGTVEAVTLRVTKLRTSEGEVYTVPNGMIAKSRNLSKDW 182
Query 204 ARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRL 263
A AVVD+PVP++AD+ RVN+VL + A +D L LLLDEP +MGVE IEVDTV +R+
Sbjct 183 ASAVVDVPVPSTADINRVNDVLREVAVTAGNDEDLARLLLDEPQLMGVESIEVDTVNVRM 242
Query 264 VARTLPGKQFEAGRQLRVLVIRALTRAGIVTAA 296
VARTLPGKQFE GR+LR LV+ AL R GI AA
Sbjct 243 VARTLPGKQFEVGRRLRALVVAALRREGIALAA 275
>gi|158318417|ref|YP_001510925.1| mechanosensitive ion channel MscS [Frankia sp. EAN1pec]
gi|158113822|gb|ABW16019.1| MscS Mechanosensitive ion channel [Frankia sp. EAN1pec]
Length=293
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/275 (59%), Positives = 202/275 (74%), Gaps = 0/275 (0%)
Query 23 EIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAV 82
+I +W RGL IVM++IAAVL RF TW+ +RV RR+D ++SD +VRSEATKHR AV
Sbjct 10 DISEWARGRGLEIVMIVIAAVLLTRFATWVGDRVERRIDQQSSQSDGVVRSEATKHRHAV 69
Query 83 ASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFII 142
V++WVS+ L+Y V V V+ L VPV +V PA V+G ALGFGAQR+VQD+LAGFF++
Sbjct 70 VQVLTWVSLALVYCVAVVLVLQRLGVPVTGIVAPATVVGVALGFGAQRVVQDVLAGFFLV 129
Query 143 VEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKD 202
E+QYGFGDLV L + G+P GTVE+VTLR+T +R+S GEV PNG IV+ VNLS+D
Sbjct 130 TERQYGFGDLVRLVVQGAPSAVTGTVEEVTLRITSVRTSNGEVVITPNGQIVQVVNLSRD 189
Query 203 WARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLR 262
WARAVVD+P+PTS D+ V++VL + A D L +LLLD PTVMGVE I++D +R
Sbjct 190 WARAVVDVPIPTSVDVTTVSDVLARVGAEAYADDALHDLLLDAPTVMGVESIDLDQFKIR 249
Query 263 LVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAAD 297
+VARTLPGKQFE GR LR + AL RAGI AD
Sbjct 250 VVARTLPGKQFEVGRALRAKITVALLRAGIHVPAD 284
>gi|284993248|ref|YP_003411803.1| mechanosensitive ion channel MscS [Geodermatophilus obscurus
DSM 43160]
gi|284066494|gb|ADB77432.1| MscS Mechanosensitive ion channel [Geodermatophilus obscurus
DSM 43160]
Length=301
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/266 (60%), Positives = 198/266 (75%), Gaps = 0/266 (0%)
Query 27 WILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVI 86
W+ RGL IV+L++ +VL ARFV W+ ++T R+D T DALVRSEA KHR ++ VI
Sbjct 10 WLAGRGLEIVLLILGSVLLARFVAWVGEKITDRIDARATGGDALVRSEAAKHRHSLTQVI 69
Query 87 SWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQ 146
+W IVLIY V V+ V+D +P+G LV PA VLG LGFGAQR+V D+LAGFFII E+Q
Sbjct 70 TWTLIVLIYAVAVFAVLDRAGIPIGGLVAPATVLGVGLGFGAQRIVGDVLAGFFIITERQ 129
Query 147 YGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARA 206
YGFGD+V + +VG E A GT+EDVTLRVT+LRS+ GEV T+PNG IVK NLS+DWARA
Sbjct 130 YGFGDVVSIQVVGGVEPAEGTIEDVTLRVTRLRSANGEVVTLPNGQIVKVTNLSRDWARA 189
Query 207 VVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVAR 266
VVD+PVPT+ D+ RVNE+L + A HD L LLLD P+VMGVE I+++ V +R+VAR
Sbjct 190 VVDVPVPTTVDVNRVNEILKEVGAEAFHDQRLRPLLLDPPSVMGVETIDLEQVNVRMVAR 249
Query 267 TLPGKQFEAGRQLRVLVIRALTRAGI 292
TLPGKQFE GR LR V+ A R G+
Sbjct 250 TLPGKQFEVGRDLRARVVLAFRREGL 275
>gi|288924090|ref|ZP_06418144.1| MscS Mechanosensitive ion channel [Frankia sp. EUN1f]
gi|288344561|gb|EFC79036.1| MscS Mechanosensitive ion channel [Frankia sp. EUN1f]
Length=302
Score = 295 bits (755), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 149/270 (56%), Positives = 192/270 (72%), Gaps = 0/270 (0%)
Query 23 EIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAV 82
+I +W +GL IVM++I AVL RF W RV RR+D +D VRSE TKHR AV
Sbjct 19 DISEWARGQGLEIVMIVIGAVLLTRFANWAGARVERRIDARALVTDGAVRSETTKHRHAV 78
Query 83 ASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFII 142
V++WV++VL+Y V V V+ L VP+ +V PA VLG ALGFGAQR+VQD+LAGFF++
Sbjct 79 VQVLTWVTLVLVYCVAVMLVLRRLGVPLTGIVAPATVLGVALGFGAQRIVQDVLAGFFMV 138
Query 143 VEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKD 202
E+QYGFGDLV L + GSP GTVE+VTLR+T++R+ GEV PNG IV+ VNLS+D
Sbjct 139 AERQYGFGDLVRLVVQGSPTAITGTVEEVTLRITRVRTPNGEVVITPNGQIVQVVNLSRD 198
Query 203 WARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLR 262
WARAV+++P+P+S D+ V +VL + A D L LLLDEPTVMGVE +++D ++
Sbjct 199 WARAVINVPIPSSVDVATVTDVLTEVGVDAYADEALHGLLLDEPTVMGVESLDLDQFKVQ 258
Query 263 LVARTLPGKQFEAGRQLRVLVIRALTRAGI 292
+VARTLPGKQFE GR LR + AL RAGI
Sbjct 259 IVARTLPGKQFEVGRALRARISGALLRAGI 288
>gi|111224900|ref|YP_715694.1| hypothetical protein FRAAL5535 [Frankia alni ACN14a]
gi|111152432|emb|CAJ64168.1| Conserved hypothetical protein [Frankia alni ACN14a]
Length=304
Score = 288 bits (738), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 144/284 (51%), Positives = 194/284 (69%), Gaps = 1/284 (0%)
Query 23 EIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAV 82
+IG W GL +V+L+ A L R TWL +RVT R+D+ T +D +VR+EA KHR AV
Sbjct 20 DIGHWARGSGLEVVLLVTGAALLTRLATWLGDRVTSRIDVPATGADRVVRTEAAKHRHAV 79
Query 83 ASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFII 142
A V++W +V++Y + V+ VP+ V PA ++G ALGFGAQR+VQD+LAGFFII
Sbjct 80 AQVVTWTVLVIVYCLTAVLVLQRFGVPLTGFVAPATIVGVALGFGAQRVVQDILAGFFII 139
Query 143 VEKQYGFGDLVELSMVGSP-ENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSK 201
E+QYGFGDLV L + G P + GTVE+VTLR+T++R+S GEV T NG IV+ +NLS+
Sbjct 140 AERQYGFGDLVRLLVAGGPAAGSTGTVEEVTLRITRIRTSSGEVVTTSNGQIVQVINLSR 199
Query 202 DWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTL 261
DWARA+VD+P+P +ADL V+++L++ A D L LLLD PTVMGVE +++D +
Sbjct 200 DWARAIVDVPIPATADLTTVSDLLNRVGAEAYADETLHALLLDAPTVMGVESMDLDEFKI 259
Query 262 RLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAES 305
R+VART PG+QFE GR LR + AL R GI+ D A S
Sbjct 260 RVVARTQPGRQFEVGRTLRARIGTALLREGIIVPTDLDTAAPTS 303
>gi|343924878|ref|ZP_08764415.1| putative MscS family protein [Gordonia alkanivorans NBRC 16433]
gi|343765224|dbj|GAA11341.1| putative MscS family protein [Gordonia alkanivorans NBRC 16433]
Length=321
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 154/290 (54%), Positives = 205/290 (71%), Gaps = 11/290 (3%)
Query 22 GEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQA 81
G + W+ GL IV+ ++ AVL AR + W A + R++ F+ SD +V++E KHR+A
Sbjct 22 GRVYVWLATSGLEIVIWILGAVLLARVIRWFAGKYAARVETRFSTSDLIVQTEDAKHRRA 81
Query 82 VASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFI 141
+ V++W IV I +VVV ++ V +P+ L GP AV+GAALGFGAQR+VQD+LAGFF+
Sbjct 82 LVDVVAWTLIVGIAIVVVIHILGVFGIPLSGLTGPTAVIGAALGFGAQRIVQDILAGFFV 141
Query 142 IVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSK 201
+ EKQYG+GD+V L++ G+ A GTVEDVTLRVTKLR++EGEV TVPNG I+K+ NLSK
Sbjct 142 VAEKQYGYGDVVNLTVTGN-APAEGTVEDVTLRVTKLRTTEGEVITVPNGQIIKATNLSK 200
Query 202 DWARAVVDIPVPTSADLGRVNEVL----HQECEHAR-HDSLLGELLLDEPTVMGVERIEV 256
DWARAVVD+PVP+ AD+G VN+ L HQ E R HD +LLD P+ +GV +E+
Sbjct 201 DWARAVVDVPVPSEADIGLVNDTLDRVGHQFYELPRWHD-----ILLDAPSSLGVINLEL 255
Query 257 DTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESP 306
D++T+R+V RTLPGKQFE GR LRV +IRAL R GI+ A A P
Sbjct 256 DSITVRMVTRTLPGKQFEVGRALRVHIIRALAREGIMVPAGREVQAAGGP 305
>gi|262203334|ref|YP_003274542.1| mechanosensitive ion channel protein MscS [Gordonia bronchialis
DSM 43247]
gi|262086681|gb|ACY22649.1| MscS Mechanosensitive ion channel [Gordonia bronchialis DSM 43247]
Length=320
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/277 (52%), Positives = 197/277 (72%), Gaps = 1/277 (0%)
Query 30 NRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWV 89
+GL +++ ++ A+L RF+ W A++ R+D FT SD +V++E KHR+A+ V++W
Sbjct 30 TKGLEVLVWILGAILVIRFIRWSADKYASRVDSRFTNSDLIVQTEDAKHRRALVDVVAWT 89
Query 90 SIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGF 149
IV++ ++V+ + V +GAL GP AV+GAALGFGAQR+VQD+LAGFF++ E+QYG+
Sbjct 90 LIVIVGIIVILHALSVYGFKLGALTGPTAVIGAALGFGAQRIVQDILAGFFVVAERQYGY 149
Query 150 GDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVD 209
GD+V L++ G ++A GTVEDVTLRVTKLR+SEGEV TVPNG I+K+ NLSKDWARAVVD
Sbjct 150 GDVVSLTVTGG-KDADGTVEDVTLRVTKLRTSEGEVITVPNGQIIKATNLSKDWARAVVD 208
Query 210 IPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLP 269
+PVP A++G VN+ L + +LLLD P+ +GV +E+D++T+R+V RTLP
Sbjct 209 VPVPAEAEIGLVNDTLDRVGREFYEQKRWHDLLLDAPSSLGVIDLELDSITVRMVTRTLP 268
Query 270 GKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESP 306
GKQFE GR LR V+RAL R GI A A P
Sbjct 269 GKQFEVGRALRANVVRALAREGITVAPGRDVTAAGGP 305
>gi|326383345|ref|ZP_08205033.1| MscS mechanosensitive ion channel [Gordonia neofelifaecis NRRL
B-59395]
gi|326198095|gb|EGD55281.1| MscS mechanosensitive ion channel [Gordonia neofelifaecis NRRL
B-59395]
Length=312
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/293 (48%), Positives = 191/293 (66%), Gaps = 7/293 (2%)
Query 16 WHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEA 75
W W +W+ + I++ +I +L RF W+A+R + R+ F SD +V+SE
Sbjct 16 WMRAWE----EWLAVDFVSILLWVIGGILVVRFFRWIADRYSSRILKQFESSDDIVQSED 71
Query 76 TKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDL 135
KHR+A+ V++W + +I V V V+ +P +LVG +AV+GAALGFGAQR+VQDL
Sbjct 72 MKHRRALVEVVTWTLVAIIAVAVTLHVLATW-IPSSSLVGLSAVVGAALGFGAQRVVQDL 130
Query 136 LAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVK 195
LAGFFII E QYG+GD+V LS+ G +A GTVEDVTLRVT+LR+S+GE+ VPNG ++K
Sbjct 131 LAGFFIIAEHQYGYGDVVNLSVTGGL-SAEGTVEDVTLRVTRLRNSDGELIVVPNGQMIK 189
Query 196 SVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIE 255
+ NLSKDWARAVVD+PVP AD+ VN L + + LLLD P+ +G+ +E
Sbjct 190 ATNLSKDWARAVVDVPVPIDADINEVNATLREVGAEFYDNPKWNRLLLDAPSSLGIISME 249
Query 256 VDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAES-PE 307
+D+ T+R+VARTLPG+QF GR LR +I L R GI +A V + PE
Sbjct 250 LDSATVRMVARTLPGQQFVIGRALRGDIIYGLARHGIFVQTKQKAVVKTAEPE 302
>gi|296392774|ref|YP_003657658.1| mechanosensitive ion channel protein MscS [Segniliparus rotundus
DSM 44985]
gi|296179921|gb|ADG96827.1| MscS Mechanosensitive ion channel [Segniliparus rotundus DSM
44985]
Length=326
Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 146/281 (52%), Positives = 191/281 (68%), Gaps = 2/281 (0%)
Query 24 IGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVA 83
GDW+L RG+RIVM +IAAVL ARF+ W A + R L F++ + VRSE ++ R+ +A
Sbjct 25 FGDWMLTRGVRIVMAMIAAVLLARFLRWAAG-IFGRGGL-FSQKHSGVRSEGSRQRETLA 82
Query 84 SVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIV 143
+ I+W VL+Y V + +L + L PA GA LGFGAQR+VQDLL+GFFII
Sbjct 83 ATIAWALTVLVYFVAGLRIAKLLEFDLTGLTVPATAAGAGLGFGAQRIVQDLLSGFFIIA 142
Query 144 EKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDW 203
EKQY GDLV+LS++G+ + GTVE+VTLRVTKLRSSEG++FTVPNG IVKS N+SKDW
Sbjct 143 EKQYRIGDLVQLSVLGTTYDPVGTVEEVTLRVTKLRSSEGQLFTVPNGQIVKSTNMSKDW 202
Query 204 ARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRL 263
++AVVDIPVP S D+G V E L + C A+ D L LL EP GVE IE+D ++R+
Sbjct 203 SQAVVDIPVPNSTDIGLVREKLVEICAAAKEDPNLATLLRGEPVYTGVESIELDRTSMRI 262
Query 264 VARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE 304
VA ++PG+QF R+LR ++ L + GI T A A E
Sbjct 263 VANSVPGQQFVLSRRLRARILSDLRKEGIATMASPGPAQPE 303
>gi|317507692|ref|ZP_07965399.1| mechanosensitive ion channel [Segniliparus rugosus ATCC BAA-974]
gi|316254019|gb|EFV13382.1| mechanosensitive ion channel [Segniliparus rugosus ATCC BAA-974]
Length=327
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/293 (47%), Positives = 189/293 (65%), Gaps = 3/293 (1%)
Query 16 WHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEA 75
W +F + G+W+L +G RI +++IA +L RFV AN + R F E + +R EA
Sbjct 19 WQHFGVRDFGEWLLVKGTRIALIIIATILVTRFVKASANVIARG---SFKEQEPQIRGEA 75
Query 76 TKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDL 135
+ R + S WV V+ V V + L +P+ AAV GA LGFGAQR+VQD+
Sbjct 76 ARQRATLLSAFIWVFTVIQIFVAVLMIATALELPISGFAPLAAVAGAGLGFGAQRIVQDV 135
Query 136 LAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVK 195
L+GFFII EKQY GDLV+L+++G+ + GTVE VTLRVTKLRS++GE++TVPNG I+K
Sbjct 136 LSGFFIIAEKQYRIGDLVQLAVLGTTNDPIGTVEQVTLRVTKLRSTDGELYTVPNGQIIK 195
Query 196 SVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIE 255
S NLSKDWA+AVVDIPVP S+D+ + E L + C+ A+ D L LL PT +GVE IE
Sbjct 196 STNLSKDWAQAVVDIPVPASSDIAVLREKLTEVCDTAKDDPNLKPLLRSAPTFLGVEGIE 255
Query 256 VDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESPEQ 308
+D + +R+VA ++PG+QF R+LR + AL + GI T + E P+Q
Sbjct 256 MDQINMRIVANSVPGQQFVLSRRLRAKALAALRQEGINTVKNGEDHAPERPQQ 308
>gi|339295939|gb|AEJ48050.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079]
Length=124
Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%)
Query 185 VFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLD 244
+FTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLD
Sbjct 1 MFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLD 60
Query 245 EPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE 304
EPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE
Sbjct 61 EPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE 120
Query 305 SPEQ 308
SPEQ
Sbjct 121 SPEQ 124
>gi|319951471|ref|ZP_08025280.1| MscS mechanosensitive ion channel [Dietzia cinnamea P4]
gi|319434863|gb|EFV90174.1| MscS mechanosensitive ion channel [Dietzia cinnamea P4]
Length=298
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/276 (47%), Positives = 193/276 (70%), Gaps = 4/276 (1%)
Query 27 WILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQAVASVI 86
W+ N GL +V+L++ AVL R + +A T R+D +D + SE +KH ++ V+
Sbjct 13 WLSNEGLEVVLLVLGAVLLTRVIGKIARMWTGRIDA--KNADKELWSEESKHLHSLIQVL 70
Query 87 SWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQ 146
S+V++ ++YV+ +++ V + ALV PA VLGAALGFGAQ++VQD LAGFF++ E+Q
Sbjct 71 SYVAVAVLYVLFGIQILLRFGVNLVALVAPATVLGAALGFGAQKIVQDFLAGFFVLAERQ 130
Query 147 YGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARA 206
YG+GD+VEL+ AAGT+EDVTLRVT+LR+ +GE VPNG IV +VN S+DWARA
Sbjct 131 YGYGDIVELTTATGV--AAGTIEDVTLRVTRLRTLDGEAVIVPNGQIVTAVNQSQDWARA 188
Query 207 VVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMGVERIEVDTVTLRLVAR 266
++D+PVP +AD+ + +EVL + C D +GE +LDEP+VMGV+ I+++ +RL+AR
Sbjct 189 IIDVPVPNNADMDKAHEVLAEVCRDIVDDDRVGEYVLDEPSVMGVQSIKLEQTIIRLLAR 248
Query 267 TLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAV 302
T PG Q+E GR++R +++R + GIV +A AA+
Sbjct 249 TKPGMQWEVGRRMRAVILRRFRQEGIVLEPEALAAI 284
>gi|295396667|ref|ZP_06806814.1| small conductance mechanosensitive ion channel family transporter
[Brevibacterium mcbrellneri ATCC 49030]
gi|294970476|gb|EFG46404.1| small conductance mechanosensitive ion channel family transporter
[Brevibacterium mcbrellneri ATCC 49030]
Length=348
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/296 (35%), Positives = 160/296 (55%), Gaps = 22/296 (7%)
Query 27 WILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFT----------------ESDAL 70
+++ LRI +L++ A+L V L + R++ G T ++D
Sbjct 39 FLIGAPLRIAILVVMAILVTFLVRLLIRKFARKIAEGTTAVSSRRFGGDARDRVIKTDPA 98
Query 71 VRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQR 130
+ + Q V S++S ++ ++I+V++ ++ L ++ A V G A+GFGAQ
Sbjct 99 SVARRAQRAQTVGSLLSSIAAIIIFVIMALMIMQELGYNPAPILASAGVAGVAIGFGAQS 158
Query 131 LVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFTVPN 190
LV+D L+GFFI+ E QYG GD V+L A GTVEDV LR TK+R +G ++ VPN
Sbjct 159 LVRDYLSGFFIVAEDQYGIGDTVDLG------EAVGTVEDVGLRTTKVRGIDGTLWHVPN 212
Query 191 GNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPTVMG 250
G I++ N S+ WARAV+D+PVP AD V+E + E R+ L +L+EP + G
Sbjct 213 GEILRVGNQSQGWARAVMDLPVPYDADQKVVDEAIQAAVESMRNKPDLAPSILEEPEIWG 272
Query 251 VERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESP 306
V+ I + VT+R V +T P +Q+ R R + R L + GI A A++ + P
Sbjct 273 VQEISGNAVTIRTVIKTKPNEQWGVARAFRAEIQRELRKRGITIAIPAQSLIGTVP 328
>gi|326333761|ref|ZP_08199994.1| transporter, small conductance mechanosensitive ion channel (MscS)
family [Nocardioidaceae bacterium Broad-1]
gi|325948343|gb|EGD40450.1| transporter, small conductance mechanosensitive ion channel (MscS)
family [Nocardioidaceae bacterium Broad-1]
Length=316
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/285 (35%), Positives = 161/285 (57%), Gaps = 25/285 (8%)
Query 23 EIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALV----------- 71
++G+W++ LRI+ L++ AV+ + W+ +RV ++ E+ AL
Sbjct 16 KLGEWVIGIPLRILGLILLAVV----LRWVLHRVIDKVVHRAVEAPALAGKITKMHEPGE 71
Query 72 ----RSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFG 127
S ++ QA+ S+ V ++ V ++D L + + ++ A ++G ALGFG
Sbjct 72 EIHASSRRSQRAQAIGSLFKSVVTGVLVAVFATMILDQLGINIAPIIASAGIVGLALGFG 131
Query 128 AQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFT 187
AQ LV+D L+G F+I+E QYG GD +E++ N +GTVE VTLR+T+LRS +G V+
Sbjct 132 AQSLVRDYLSGIFMIIEDQYGVGDSIEVN------NISGTVEAVTLRITRLRSLDGTVWY 185
Query 188 VPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPT 247
+PNG I+ N S++WARAV+D+ V + DL +V VL + D +++EP
Sbjct 186 IPNGEILTVGNHSQNWARAVIDVGVGYNEDLNKVQRVLREVSHDLWVDEDFKGQIIEEPE 245
Query 248 VMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGI 292
V GVE + D +T+R++ +TLP KQ+ R++R + L GI
Sbjct 246 VTGVEALAADAITVRVLVKTLPLKQWAIAREMRQRIKARLDYEGI 290
>gi|311743075|ref|ZP_07716883.1| mechanosensitive ion channel family protein [Aeromicrobium marinum
DSM 15272]
gi|311313755|gb|EFQ83664.1| mechanosensitive ion channel family protein [Aeromicrobium marinum
DSM 15272]
Length=304
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/243 (40%), Positives = 141/243 (59%), Gaps = 10/243 (4%)
Query 69 ALVRSEATKHRQ----AVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAAL 124
A +R A++ RQ A+ +++ ++ +LI + ++D L V + L+ A +LG AL
Sbjct 68 ADLRPGASQRRQQRATAIGDLLTSIASILIAGIAFVMILDQLGVNIAPLLTGAGILGVAL 127
Query 125 GFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGE 184
GFGAQ LV+D LAG F+I+E QYG GD++++ A+GTVE V LR+T+LR G
Sbjct 128 GFGAQTLVKDFLAGIFMILEDQYGVGDVIDMG------EASGTVEAVGLRITRLRDVNGT 181
Query 185 VFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLD 244
V+ V NG +V+ N S+ WAR V+DI V ADL V ++L +E D E++L+
Sbjct 182 VWYVRNGEVVRVGNQSQTWARTVLDITVSYDADLDVVQQILAEEAHAVYTDEKFSEVVLE 241
Query 245 EPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAE 304
EP V GVER + D +R+V +T P +Q+ R +R + AGI + RA V E
Sbjct 242 EPEVWGVERFDSDGAVVRVVLKTAPLQQWAVARAMRQRIKYRFDEAGIEIPSLFRARVEE 301
Query 305 SPE 307
S E
Sbjct 302 SSE 304
>gi|269125584|ref|YP_003298954.1| mechanosensitive ion channel MscS [Thermomonospora curvata DSM
43183]
gi|268310542|gb|ACY96916.1| MscS Mechanosensitive ion channel [Thermomonospora curvata DSM
43183]
Length=335
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/307 (35%), Positives = 168/307 (55%), Gaps = 29/307 (9%)
Query 9 ATSIAQHWH-NFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLG---- 63
AT +H + W NR IV+ L A++ R V + ++T R+ G
Sbjct 44 ATKFVHDYHLDLW--------TNRLFAIVVTLTVALILRRIVHRMIIKITTRMAEGTVPE 95
Query 64 --------FTESDALVRSEATKHR-QAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALV 114
E ++ SE + R + + SV+ ++ ++I V+ + L + + ++
Sbjct 96 RLRSSGRTHVEGSQVLLSERRQQRAKTLGSVLRSIASIVIMGTAVFSALGELGLNLTPVL 155
Query 115 GPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLR 174
A+V+G A+GFGAQ LV+D LAG FI++E Q+G GD+V++ A GTVE +TLR
Sbjct 156 ASASVIGVAVGFGAQSLVKDFLAGLFILLEDQFGVGDVVDVG------QAKGTVEAITLR 209
Query 175 VTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARH 234
VT+LR G V+ + NG I++ N S++WARAV+DIPV D +V E+L +
Sbjct 210 VTRLRDVNGVVWYIRNGEILRVGNESQNWARAVLDIPVGYEEDTTKVKEILKTTADKLAA 269
Query 235 DSLLGELLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVT 294
D +++L+EP+V GV+ + + V +RLV +T PG+Q E R+LR V +L AG VT
Sbjct 270 DPGWADIILEEPSVWGVQGLSGEAVVVRLVVKTAPGRQGEVARELRERVKYSLDAAG-VT 328
Query 295 AADARAA 301
A+ AA
Sbjct 329 VANPPAA 335
>gi|332669909|ref|YP_004452917.1| mechanosensitive ion channel MscS [Cellulomonas fimi ATCC 484]
gi|332338947|gb|AEE45530.1| MscS Mechanosensitive ion channel [Cellulomonas fimi ATCC 484]
Length=400
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/288 (37%), Positives = 155/288 (54%), Gaps = 27/288 (9%)
Query 26 DWILNRGLRIVML-------LIAAVLAARFVT--------WLANRVTRRL---DLGFT-- 65
+W L LRIV++ LI A R VT W V R L D+ T
Sbjct 36 EWFLGLPLRIVIIVAVGTVVLILLRRAIRGVTDHVADGTPWFQRGVMRPLGESDVARTLL 95
Query 66 -ESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAAL 124
+D L + ++ + + SV+ + V++ ++V V+ L V + + A ++G AL
Sbjct 96 RATDPLATARRSQRARTLGSVLRSTATVVVGTIMVLLVLAELGVNIAPFIASAGIVGVAL 155
Query 125 GFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGE 184
GFGAQ LV+D L G F+++E QYG GD+V++ A GTVE VTLRVTK+R S+G
Sbjct 156 GFGAQSLVKDFLTGLFMLLEDQYGVGDVVDVG------PATGTVEAVTLRVTKIRDSDGT 209
Query 185 VFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLD 244
++ VPNG++++ N ++ WA AVV+I V ADL +V +L + D +LG L
Sbjct 210 LWYVPNGSMLRVGNKTQGWATAVVEIDVDYFADLDQVRALLREAAARVEADPVLGAHLQG 269
Query 245 EPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGI 292
PT+ G+ER+ D +TLRL RT P Q++ R LR L RA +
Sbjct 270 APTITGIERLSADAITLRLKVRTSPAMQWDVARALRTATRDVLERADV 317
>gi|302529049|ref|ZP_07281391.1| MscS mechanosensitive ion channel [Streptomyces sp. AA4]
gi|302437944|gb|EFL09760.1| MscS mechanosensitive ion channel [Streptomyces sp. AA4]
Length=346
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/292 (34%), Positives = 157/292 (54%), Gaps = 22/292 (7%)
Query 17 HNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFT-ESDALVRS-- 73
HN W W++ + L+I+M+L+ A + L +RVT G + +L+R
Sbjct 40 HNEWLAASAGWLVTKPLKIIMILVIAFVVRYLTKRLIDRVTTLPSSGGNGKIPSLLRPLR 99
Query 74 ------------EATKHR-QAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL 120
E + R + + SV+ ++ LIY + V+ L + + ++ A ++
Sbjct 100 ERAPEMLGTAVVERRRQRAKTIGSVLKSMATFLIYGLAFILVLGELGIDLAPIIASAGIV 159
Query 121 GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS 180
G ALGFGAQ LV+D L+G F+++E QYG GD+V++ A GTVE V LR+T LR
Sbjct 160 GVALGFGAQNLVKDFLSGMFMMIEDQYGVGDVVDIG------EATGTVEAVGLRITTLRD 213
Query 181 SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE 240
+G V+ V NG +++ N S+ +A AVVD+P+ SAD+ + EVL A L
Sbjct 214 LKGTVWYVRNGEVLRVGNSSQGFAYAVVDVPLSYSADVDKATEVLSGAATKAVETDALSA 273
Query 241 LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGI 292
+L+ P ++GVE++ + + LRL + PGKQ+ R+LR ++ AL AG
Sbjct 274 NVLEPPEMLGVEQVTPEGIVLRLTVKVRPGKQWAVQRKLRGQLLGALEEAGF 325
>gi|271968587|ref|YP_003342783.1| mechanosensitive ion channel [Streptosporangium roseum DSM 43021]
gi|270511762|gb|ACZ90040.1| mechanosensitive ion channel [Streptosporangium roseum DSM 43021]
Length=337
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/245 (37%), Positives = 145/245 (60%), Gaps = 7/245 (2%)
Query 52 LANRVTRRLDLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVG 111
+A R+ + + DA+ + + + SV+ V+ ++I V++ L VP+
Sbjct 98 IAGRLRGKQSVALEGLDAVAAERRRQRAETIGSVLRPVASIVILGTAALTVLERLSVPIA 157
Query 112 ALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDV 171
L+ ++G A+GFGAQ LV+D +AG F+++E QYG GD+++ VG+ A GTVE V
Sbjct 158 PLLTSVGIVGVAVGFGAQELVKDFIAGMFMLLEDQYGVGDVID---VGA---AIGTVEAV 211
Query 172 TLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEH 231
TLR+T+LR +G V+ V NG I + N S+ W+RA VD+PV ++D+ V +L + E
Sbjct 212 TLRITRLRDIDGRVWYVRNGTITRVGNESQGWSRATVDVPVSYASDIPAVRALLKEVVED 271
Query 232 ARHDSLLGE-LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRA 290
+DS + ++++EP V G+E+I + R+ A+T+P +Q E R+LRV + AL RA
Sbjct 272 MWNDSTYRDSVMVEEPQVWGIEQISDTAIVFRISAKTIPSRQAEVARELRVRIKSALDRA 331
Query 291 GIVTA 295
I A
Sbjct 332 SIPIA 336
>gi|134097919|ref|YP_001103580.1| MscS mechanosensitive ion channel [Saccharopolyspora erythraea
NRRL 2338]
gi|291009511|ref|ZP_06567484.1| small conductance mechanosensitive ion channel, MscS family [Saccharopolyspora
erythraea NRRL 2338]
gi|133910542|emb|CAM00655.1| MscS mechanosensitive ion channel [Saccharopolyspora erythraea
NRRL 2338]
Length=326
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/302 (35%), Positives = 157/302 (52%), Gaps = 19/302 (6%)
Query 20 WRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTR------------RLDLGFTES 67
W + ++ + L IV +L+ A L FV N +TR + G T +
Sbjct 30 WLAAYAELLIAKPLNIVFILLVAFLLRYFVHRTINGLTRGNGKTPKLLQPLKERRGDTLT 89
Query 68 DALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFG 127
L+ + + + SV+ ++ LI+ + V+ V V +G ++ A VLG A+ FG
Sbjct 90 AELLSERRKQRARTIGSVLKSIASFLIFGIASMYVLKVFDVELGPVLASAGVLGVAVAFG 149
Query 128 AQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVFT 187
AQ LV+D L+G F++VE QYG GD+V+L A GTVE V LRVT LR G V+
Sbjct 150 AQNLVRDFLSGMFMMVEDQYGVGDVVDLG------EATGTVEAVGLRVTTLRDLNGTVWY 203
Query 188 VPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEPT 247
V NG I++ N S+ +A AVVD P+ ++D+ + EV + A L + +L+ P
Sbjct 204 VRNGEILRVGNSSQGFAVAVVDFPISHNSDVEKAIEVAGEVAAEATSREPLSQDVLEPPE 263
Query 248 VMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTA-ADARAAVAESP 306
++GV++I DT+TLRL + PGKQ+ R+LR + RA + I + R SP
Sbjct 264 MLGVDQITSDTITLRLTTKVRPGKQWAVQRRLRAEIKRAYDDSDIQPPYPNGRPVTPTSP 323
Query 307 EQ 308
Q
Sbjct 324 GQ 325
>gi|84494314|ref|ZP_00993433.1| small-conductance mechanosensitive channel [Janibacter sp. HTCC2649]
gi|84383807|gb|EAP99687.1| small-conductance mechanosensitive channel [Janibacter sp. HTCC2649]
Length=308
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/289 (37%), Positives = 157/289 (55%), Gaps = 29/289 (10%)
Query 24 IGDWILNRGLRIVMLLIAAV--------LAARFVTWLANRVTRRLDLG---------FTE 66
I +W+L GLRI++ L AV L AR V + ++ T R D G F E
Sbjct 16 IQEWLLTDGLRILLTLALAVIVRWLLHRLIARVVKTMTSKTTARDDEGRDRSLTGRLFAE 75
Query 67 SDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLP---VPVGALVGPAAVLGAA 123
+ A R+ +H+Q A++ S + + +VV + ++ V+ +P+G L+ A V G A
Sbjct 76 ASATARA---RHQQRTATLGSLLRSSVTFVVGLVAMLTVMALVGIPLGPLLASAGVGGVA 132
Query 124 LGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEG 183
LGFGAQ LV+D L+G F+I+E QYG GD+++ A GTVE+V+LRVT+LR + G
Sbjct 133 LGFGAQSLVKDFLSGVFMILEDQYGVGDVIDTG------EAIGTVEEVSLRVTRLRDANG 186
Query 184 EVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLL 243
+ + NG I++ NLS+ A A+VD+PV D+ V V+ D LL
Sbjct 187 VTWYIRNGEIIRIGNLSQHRATAIVDVPVAYDEDVAHVTAVISDAAAAMAADKAWEGRLL 246
Query 244 DEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGI 292
D P V G+E I T+TLR++A P + + R+LR + AL AG+
Sbjct 247 DTPKVAGIESIVGQTMTLRVLAEASPSDKVDIQRELRQRIKSALDVAGV 295
>gi|269929422|ref|YP_003321743.1| MscS Mechanosensitive ion channel [Sphaerobacter thermophilus
DSM 20745]
gi|269788779|gb|ACZ40921.1| MscS Mechanosensitive ion channel [Sphaerobacter thermophilus
DSM 20745]
Length=332
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/226 (39%), Positives = 132/226 (59%), Gaps = 7/226 (3%)
Query 67 SDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGF 126
+D R A+K +A+VI +LI +V V+ L V + L+ A + G A+G
Sbjct 72 ADTPPRELASKA-NTLANVIESAGRMLILIVAGMMVLSRLGVNIAPLLASAGIAGIAIGL 130
Query 127 GAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRSSEGEVF 186
GAQ L++DL+ GFFI+ E Q+G GD+V++ +A+G VE ++LR T LR+ +G
Sbjct 131 GAQSLIKDLIGGFFILFENQFGVGDVVQIG------DASGVVEQLSLRRTGLRAIDGSFI 184
Query 187 TVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGELLLDEP 246
VPNG+I N++KDW+RAVVD+ VP ADL +V E+L D ++G+ +L
Sbjct 185 VVPNGDIRTVTNMTKDWSRAVVDVAVPYDADLNKVIEILQGLVAGLDQDPVVGDAVLGPG 244
Query 247 TVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGI 292
+ GVE +E V LRL+ +T P +Q+ R+LR + A T AGI
Sbjct 245 EITGVEALESTQVKLRLLVKTKPMEQWRVQRELRRRIKDAFTDAGI 290
Lambda K H
0.322 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 524399257434
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40