BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3114 Length=176 Score E Sequences producing significant alignments: (Bits) Value gi|15842685|ref|NP_337722.1| hypothetical protein MT3196 [Mycoba... 360 3e-98 gi|15610251|ref|NP_217630.1| hypothetical protein Rv3114 [Mycoba... 358 1e-97 gi|31794293|ref|NP_856786.1| hypothetical protein Mb3141 [Mycoba... 356 8e-97 gi|308232338|ref|ZP_07415761.2| hypothetical protein TMAG_03287 ... 329 1e-88 gi|17232126|ref|NP_488674.1| hypothetical protein alr4634 [Nosto... 90.1 1e-16 gi|119511953|ref|ZP_01631050.1| Cytidine/deoxycytidylate deamina... 89.4 2e-16 gi|75908250|ref|YP_322546.1| cytidine/deoxycytidylate deaminase ... 88.6 3e-16 gi|186682609|ref|YP_001865805.1| CMP/dCMP deaminase, zinc-bindin... 83.6 1e-14 gi|126659190|ref|ZP_01730328.1| Cytidine/deoxycytidylate deamina... 83.2 1e-14 gi|119486171|ref|ZP_01620231.1| Cytidine/deoxycytidylate deamina... 82.4 2e-14 gi|159901995|gb|ABX10725.1| cytidine and deoxycytidylate deamina... 79.0 3e-13 gi|283781867|ref|YP_003372622.1| CMP/dCMP deaminase zinc-binding... 73.6 1e-11 gi|229817012|ref|ZP_04447294.1| hypothetical protein BIFANG_0226... 72.4 2e-11 gi|313674792|ref|YP_004052788.1| cmp/dcmp deaminase zinc-binding... 70.1 1e-10 gi|297622621|ref|YP_003704055.1| CMP/dCMP deaminase zinc-binding... 70.1 1e-10 gi|254498334|ref|ZP_05111073.1| cytidine and deoxycytidylate dea... 69.3 2e-10 gi|253989703|ref|YP_003041059.1| hypothetical protein PAU_02223 ... 67.8 7e-10 gi|291326525|ref|ZP_06124898.2| tRNA-specific adenosine deaminas... 67.0 1e-09 gi|225558752|gb|EEH07036.1| conserved hypothetical protein [Ajel... 67.0 1e-09 gi|193213141|ref|YP_001999094.1| zinc-binding CMP/dCMP deaminase... 66.6 1e-09 gi|270284659|ref|ZP_05966459.2| cytidine/deoxycytidylate deamina... 65.5 3e-09 gi|237784829|ref|YP_002905534.1| putative cytosine/adenosine dea... 65.5 3e-09 gi|194333451|ref|YP_002015311.1| CMP/dCMP deaminase [Prosthecoch... 64.3 6e-09 gi|189499637|ref|YP_001959107.1| zinc-binding CMP/dCMP deaminase... 64.3 6e-09 gi|336118608|ref|YP_004573377.1| putative deaminase [Microlunatu... 63.9 8e-09 gi|302408545|ref|XP_003002107.1| FCY1p [Verticillium albo-atrum ... 63.5 1e-08 gi|78188173|ref|YP_378511.1| cytosine deaminase [Chlorobium chlo... 63.5 1e-08 gi|225352824|ref|ZP_03743847.1| hypothetical protein BIFPSEUDO_0... 63.2 1e-08 gi|311741106|ref|ZP_07714931.1| cytidine and deoxycytidylate dea... 63.2 1e-08 gi|325110159|ref|YP_004271227.1| CMP/dCMP deaminase zinc-binding... 62.8 2e-08 gi|336321999|ref|YP_004601967.1| CMP/dCMP deaminase zinc-binding... 62.4 2e-08 gi|255324366|ref|ZP_05365485.1| tRNA-specific adenosine deaminas... 62.4 2e-08 gi|291455623|ref|ZP_06595013.1| cytidine and deoxycytidylate dea... 62.4 2e-08 gi|333110575|gb|AEF27591.1| cytidine and deoxycytidylate deamina... 62.4 3e-08 gi|297243273|ref|ZP_06927208.1| cytidine and deoxycytidylate dea... 62.0 3e-08 gi|283783769|ref|YP_003374523.1| cytidine and deoxycytidylate de... 62.0 3e-08 gi|21673220|ref|NP_661285.1| cytosine deaminase, putative [Chlor... 61.6 4e-08 gi|293375825|ref|ZP_06622095.1| putative guanine deaminase [Turi... 61.6 5e-08 gi|325838575|ref|ZP_08166576.1| guanine deaminase [Turicibacter ... 61.6 5e-08 gi|183597629|ref|ZP_02959122.1| hypothetical protein PROSTU_0091... 61.2 6e-08 gi|46204383|ref|ZP_00209388.1| COG0590: Cytosine/adenosine deami... 60.8 6e-08 gi|78186386|ref|YP_374429.1| cytosine deaminase [Chlorobium lute... 60.8 7e-08 gi|73539205|ref|YP_299572.1| cytidine/deoxycytidylate deaminase ... 60.8 7e-08 gi|298252974|ref|ZP_06976766.1| cytidine and deoxycytidylate dea... 60.5 1e-07 gi|294790273|ref|ZP_06755431.1| tRNA-specific adenosine deaminas... 60.5 1e-07 gi|212716206|ref|ZP_03324334.1| hypothetical protein BIFCAT_0112... 60.5 1e-07 gi|339480065|gb|ABE96532.1| tRNA-specific adenosine deaminase [B... 60.1 1e-07 gi|311742000|ref|ZP_07715810.1| cytidine and deoxycytidylate dea... 60.1 1e-07 gi|11068000|gb|AAG28837.1| cytosine deaminase [Bifidobacterium l... 60.1 1e-07 gi|322690120|ref|YP_004209854.1| cytidine/deoxycytidine deaminas... 60.1 1e-07 >gi|15842685|ref|NP_337722.1| hypothetical protein MT3196 [Mycobacterium tuberculosis CDC1551] gi|167969723|ref|ZP_02552000.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis H37Ra] gi|254233738|ref|ZP_04927063.1| conserved hypothetical protein [Mycobacterium tuberculosis C] 8 more sequence titles Length=187 Score = 360 bits (925), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 176/176 (100%), Positives = 176/176 (100%), Gaps = 0/176 (0%) Query 1 VVAARLPFGWSADSGVTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFE 60 VVAARLPFGWSADSGVTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFE Sbjct 12 VVAARLPFGWSADSGVTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFE 71 Query 61 SGDRFAHAETNVLRAAMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLI 120 SGDRFAHAETNVLRAAMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLI Sbjct 72 SGDRFAHAETNVLRAAMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLI 131 Query 121 QCGWFQIRISASDVVAASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH 176 QCGWFQIRISASDVVAASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH Sbjct 132 QCGWFQIRISASDVVAASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH 187 >gi|15610251|ref|NP_217630.1| hypothetical protein Rv3114 [Mycobacterium tuberculosis H37Rv] gi|148662968|ref|YP_001284491.1| hypothetical protein MRA_3146 [Mycobacterium tuberculosis H37Ra] gi|148824307|ref|YP_001289061.1| hypothetical protein TBFG_13134 [Mycobacterium tuberculosis F11] 14 more sequence titles Length=176 Score = 358 bits (920), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 175/176 (99%), Positives = 176/176 (100%), Gaps = 0/176 (0%) Query 1 VVAARLPFGWSADSGVTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFE 60 +VAARLPFGWSADSGVTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFE Sbjct 1 MVAARLPFGWSADSGVTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFE 60 Query 61 SGDRFAHAETNVLRAAMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLI 120 SGDRFAHAETNVLRAAMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLI Sbjct 61 SGDRFAHAETNVLRAAMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLI 120 Query 121 QCGWFQIRISASDVVAASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH 176 QCGWFQIRISASDVVAASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH Sbjct 121 QCGWFQIRISASDVVAASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH 176 >gi|31794293|ref|NP_856786.1| hypothetical protein Mb3141 [Mycobacterium bovis AF2122/97] gi|121638999|ref|YP_979223.1| hypothetical protein BCG_3139 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991491|ref|YP_002646180.1| hypothetical protein JTY_3134 [Mycobacterium bovis BCG str. Tokyo 172] 26 more sequence titles Length=176 Score = 356 bits (913), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 174/176 (99%), Positives = 175/176 (99%), Gaps = 0/176 (0%) Query 1 VVAARLPFGWSADSGVTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFE 60 +VAARLPFGW ADSGVTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFE Sbjct 1 MVAARLPFGWPADSGVTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFE 60 Query 61 SGDRFAHAETNVLRAAMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLI 120 SGDRFAHAETNVLRAAMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLI Sbjct 61 SGDRFAHAETNVLRAAMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLI 120 Query 121 QCGWFQIRISASDVVAASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH 176 QCGWFQIRISASDVVAASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH Sbjct 121 QCGWFQIRISASDVVAASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH 176 >gi|308232338|ref|ZP_07415761.2| hypothetical protein TMAG_03287 [Mycobacterium tuberculosis SUMu001] gi|308369958|ref|ZP_07419664.2| hypothetical protein TMBG_03264 [Mycobacterium tuberculosis SUMu002] gi|308371237|ref|ZP_07424291.2| hypothetical protein TMCG_01530 [Mycobacterium tuberculosis SUMu003] 19 more sequence titles Length=161 Score = 329 bits (843), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 160/161 (99%), Positives = 161/161 (100%), Gaps = 0/161 (0%) Query 16 VTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA 75 +TADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA Sbjct 1 MTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA 60 Query 76 AMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVV 135 AMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVV Sbjct 61 AMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVV 120 Query 136 AASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH 176 AASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH Sbjct 121 AASTRPTRPSVYSGFLSHKTDLLYRNSENRRAMNPWTDPSH 161 >gi|17232126|ref|NP_488674.1| hypothetical protein alr4634 [Nostoc sp. PCC 7120] gi|17133771|dbj|BAB76333.1| alr4634 [Nostoc sp. PCC 7120] Length=140 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 5/140 (3%) Query 22 EAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTLP 81 E M LAI A+ AP+GA ++ + AF+ NT D AHAE NV+R + L Sbjct 4 EYFMRLAIAEAKKGDAPYGAVIVKDNQVVAFAH-NTVARDNDPSAHAEINVIRRLTAQLQ 62 Query 82 E--LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAST 139 L+ + + +T EPCPMCAAA V SG+ II+G SI+ LI QI+IS +V+A S Sbjct 63 SFSLAGYSIYTTGEPCPMCAAACVWSGIAEIIYGASIQDLILANQSQIQISCEEVIAKSL 122 Query 140 RPTRPSVYSGFLSHKTDLLY 159 R + V G L + L+ Sbjct 123 RNIK--VTKGILRQECLNLF 140 >gi|119511953|ref|ZP_01631050.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia spumigena CCY9414] gi|119463373|gb|EAW44313.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia spumigena CCY9414] Length=143 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/141 (37%), Positives = 79/141 (57%), Gaps = 5/141 (3%) Query 22 EAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL- 80 E M++A++ A+ AP+GA ++ + A + NT + D AHAE NV+R+ + L Sbjct 4 EYFMQIALEEAKKGDAPYGAVIVKHQEVVAVAH-NTVKGNSDPSAHAEINVIRSLTAKLK 62 Query 81 -PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAST 139 P L + + +T EPCPMCA A V +G+ I++G SI+ LI QI I+ +V+A S Sbjct 63 SPSLEGYSIYTTGEPCPMCATACVWAGISEIVYGASIQDLISVNQSQIDITCEEVIAKSF 122 Query 140 RPTRPSVYSGFLSHKTDLLYR 160 R + V G L H+ L+ Sbjct 123 RNIK--VTRGILKHECLELFN 141 >gi|75908250|ref|YP_322546.1| cytidine/deoxycytidylate deaminase [Anabaena variabilis ATCC 29413] gi|75701975|gb|ABA21651.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Anabaena variabilis ATCC 29413] Length=141 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/140 (40%), Positives = 76/140 (55%), Gaps = 5/140 (3%) Query 22 EAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTLP 81 E M LAI A+ AP+GA ++ + AF+ NT D AHAE NV+R + L Sbjct 4 EYFMRLAIAEAKKGDAPYGAVIVKDDQVVAFAH-NTVGRDNDPSAHAEINVVRRLTAQLQ 62 Query 82 E--LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAST 139 L + + +T EPCPMCAAA V SG+ II+G SI+ LI QI+IS +V+A S Sbjct 63 SFSLEGYSIYTTGEPCPMCAAACVWSGIAEIIYGASIQDLILANQAQIQISCEEVIAKSF 122 Query 140 RPTRPSVYSGFLSHKTDLLY 159 R + V G L + L+ Sbjct 123 RNIK--VTKGILRQECLNLF 140 >gi|186682609|ref|YP_001865805.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] gi|186465061|gb|ACC80862.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] Length=141 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/143 (36%), Positives = 76/143 (54%), Gaps = 5/143 (3%) Query 20 IIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMST 79 I E M LA+ A+ P+GA ++ + A + NT D AHAE NV+R+ + Sbjct 2 IPEYFMRLALAQAKEGDTPYGAVIVKDNEVVAVAH-NTVSRDNDPSAHAEINVIRSLTAK 60 Query 80 LPE--LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAA 137 L L + + +T EPCPMCA A V SG+ I++G SI+ LI QI +S +V+A Sbjct 61 LKNHFLEGYSIYTTCEPCPMCATACVWSGLSEIVYGASIQDLISINQSQINLSCEEVIAK 120 Query 138 STRPTRPSVYSGFLSHKTDLLYR 160 S R + V G L ++ L++ Sbjct 121 SFRNIK--VTKGILKNECLELFK 141 >gi|126659190|ref|ZP_01730328.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece sp. CCY0110] gi|126619495|gb|EAZ90226.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece sp. CCY0110] Length=143 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/145 (37%), Positives = 74/145 (52%), Gaps = 11/145 (7%) Query 22 EAAMELAIDTARHATAPFGAALL--DVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMS- 78 E M A+ A+ P+GA L+ D +R + NT D AH E NVLRA Sbjct 4 EKFMREALVEAKKGDLPYGAILVNNDEIIMRGY---NTAQRDNDVSAHGEINVLRAMTQK 60 Query 79 ---TLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVV 135 +L L N+ L +T EPCPMCAAA V +GV I+FG S E LI G QI ++ +VV Sbjct 61 IGYSLDSLKNYTLYTTCEPCPMCAAACVWAGVSHIVFGASTEQLISLGTQQINLTCQNVV 120 Query 136 AASTRPTRPSVYSGFLSHKTDLLYR 160 + + + G L+ + L++ Sbjct 121 TQGFQDIQ--ITGGILAEECLDLFK 143 >gi|119486171|ref|ZP_01620231.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya sp. PCC 8106] gi|119456662|gb|EAW37791.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya sp. PCC 8106] Length=144 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/144 (35%), Positives = 72/144 (50%), Gaps = 8/144 (5%) Query 22 EAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA-----A 76 E M++A++ A+ P+GA L+ + G NT D AHAE NVLR Sbjct 4 EDYMKIALEEAKKGDMPYGAVLVKEDQI-VVQGHNTAQRDNDVTAHAEINVLRQFTLENK 62 Query 77 MSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVA 136 ++ L + L +T EPCPMCAAA V G+ I+FG S + LIQ G QI +S VV Sbjct 63 SYSIDALKGYTLYTTCEPCPMCAAACVWVGLSEIVFGASTQQLIQLGSQQIDLSCEAVVK 122 Query 137 ASTRPTRPSVYSGFLSHKTDLLYR 160 + + + G L+ L++ Sbjct 123 KGFQDIK--ITQGILAEDCLALFK 144 >gi|159901995|gb|ABX10725.1| cytidine and deoxycytidylate deaminase family protein [uncultured planctomycete 13FN] Length=164 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/143 (38%), Positives = 81/143 (57%), Gaps = 4/143 (2%) Query 22 EAAMELAIDTAR-HATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA-AMST 79 E++M AI+ A+ + PFGA ++ + + G S + HAE +V+ A S Sbjct 7 ESSMRHAIEVAKANPRHPFGAVIVSSASEVIVAEG-VNRSSKNPTLHAEIDVINNYAASG 65 Query 80 LPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAST 139 + L +TAEPCPMC +A + SGV++I++GTSI TL++ GW QI I A++ VAA + Sbjct 66 GTDWHRLTLYTTAEPCPMCMSAILWSGVKSIVYGTSIPTLVRLGWDQIDIRATE-VAAKS 124 Query 140 RPTRPSVYSGFLSHKTDLLYRNS 162 T V G L + D L+R + Sbjct 125 HQTSCEVIPGVLVSECDALFRKT 147 >gi|283781867|ref|YP_003372622.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] gi|283440320|gb|ADB18762.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] Length=157 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/147 (37%), Positives = 77/147 (53%), Gaps = 6/147 (4%) Query 22 EAAMELAIDTARHA-TAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLR-AAMST 79 E+ M AI+ ARH PFGA ++D ++ + +GG + H E L A Sbjct 14 ESYMRAAIELARHVPQLPFGAVIVDRSSGKIIAGGFNQSAMNPTW-HGEIVALNDLAQRG 72 Query 80 LPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAST 139 L + + L +TAEPCPMC A + S + +I+GTSI L Q GW QI I AS+V+A S Sbjct 73 LHDRPSLALYTTAEPCPMCMGAILWSQIEELIYGTSIRFLQQTGWRQIDILASEVLARSP 132 Query 140 RPTRPSVYSGFLSHKTDLLYRNSENRR 166 + ++ G L + + L+ E RR Sbjct 133 L-GKCTIVPGVLEEECNALF--VEARR 156 >gi|229817012|ref|ZP_04447294.1| hypothetical protein BIFANG_02267 [Bifidobacterium angulatum DSM 20098] gi|229785757|gb|EEP21871.1| hypothetical protein BIFANG_02267 [Bifidobacterium angulatum DSM 20098] Length=147 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/135 (35%), Positives = 61/135 (46%), Gaps = 6/135 (4%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 + A+ELA A H P GA +LD A G NT GD AHAE +R A Sbjct 7 MRCALELAHRAAEHGDVPVGALVLDAHGHIAGEGWNTREVDGDPLAHAEVAAMREAAEHG 66 Query 81 PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAASTR 140 L++ L+ T EPCPMCA A + + + I+FG L CG S D+ Sbjct 67 WNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACG------SVWDIPRDPHV 120 Query 141 PTRPSVYSGFLSHKT 155 + P VY G + + Sbjct 121 GSVPEVYGGVMEREC 135 >gi|313674792|ref|YP_004052788.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] gi|312941490|gb|ADR20680.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] Length=138 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/145 (36%), Positives = 74/145 (52%), Gaps = 14/145 (9%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 IE M+LAID A+ PFGA L+D + SG NT G AHAE N A+S + Sbjct 3 IEFWMKLAIDLAKERKTPFGAVLVDPEG-QHVSGYNTTILDG-AVAHAEIN----AISKI 56 Query 81 PEL-----SNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVV 135 +L L +T EPCPMC +A + +G+ +I+G I T + G QI I A + Sbjct 57 KQLDYDRAEELTLFTTVEPCPMCMSAIIWAGIGEVIYGCDISTASKYG-NQINIRAKKI- 114 Query 136 AASTRPTRPSVYSGFLSHKTDLLYR 160 AS P + G L+ + + L++ Sbjct 115 -ASESWYAPIIKGGLLAIECEGLFK 138 >gi|297622621|ref|YP_003704055.1| CMP/dCMP deaminase zinc-binding protein [Truepera radiovictrix DSM 17093] gi|297163801|gb|ADI13512.1| CMP/dCMP deaminase zinc-binding protein [Truepera radiovictrix DSM 17093] Length=153 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/115 (40%), Positives = 61/115 (54%), Gaps = 3/115 (2%) Query 22 EAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL- 80 EA M LA + A FGA L+ L A NT + D AHAE +++R A L Sbjct 13 EAWMRLAAEVAERGQTMFGAVLVRGGALLA-EAANTVAKDRDPSAHAELSLIRRACRELV 71 Query 81 -PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDV 134 +L L +T EPCPMCAAA V SGV ++FG SI + + G QI +S ++ Sbjct 72 TTDLDGCTLYTTVEPCPMCAAACVWSGVSGVVFGASIAEVAELGVPQIALSCEEL 126 >gi|254498334|ref|ZP_05111073.1| cytidine and deoxycytidylate deaminase family protein [Legionella drancourtii LLAP12] gi|254352442|gb|EET11238.1| cytidine and deoxycytidylate deaminase family protein [Legionella drancourtii LLAP12] Length=175 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/141 (32%), Positives = 75/141 (54%), Gaps = 5/141 (3%) Query 22 EAAMELAIDTAR-HATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 E M++AID A+ + APF A ++D T S G + F H E + + Sbjct 34 EYYMQIAIDLAKSNPKAPFAALIVDNKTGEILSKGINASKVNPTF-HGEMVAINNCVKEH 92 Query 81 PEL--SNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 P++ S L +TAEPC MC +A V + + ++F TS E LI GW QI I A+++ S Sbjct 93 PKVDWSQVTLYTTAEPCSMCQSAVVWTKISRVVFATSFEYLINHGWNQINIRAAEINKRS 152 Query 139 TRPTRPSVYSGFLSHKTDLLY 159 + + ++ G L+ ++++L+ Sbjct 153 SF-YKGTITGGTLASQSNVLF 172 >gi|253989703|ref|YP_003041059.1| hypothetical protein PAU_02223 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781153|emb|CAQ84315.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length=193 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/150 (33%), Positives = 80/150 (54%), Gaps = 9/150 (6%) Query 22 EAAMELAIDTARH-ATAPFGAALLDVTTLRAFSGG-NTYFESGDRFAHAETNVLRAAMST 79 E M AI+ A+ A PFGA +++ ++ S G N++ + + H E + ++ Sbjct 46 EKYMREAIEEAKKSAKYPFGAVIVNRSSGEILSRGVNSWVK--NPILHGEIQAINHYVTL 103 Query 80 LPE--LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAA 137 +N L +TAEPC MC +A +G+R +I+GTSI L G QI ISA ++ Sbjct 104 YGNQGWNNVALYTTAEPCSMCMSALAWTGIREVIWGTSISGLRNVGIRQIDISAQEIAER 163 Query 138 STRPTRP-SVYSGFLSHKTDLLYRNSENRR 166 ++ P S+ G L+++TD L+ SE R+ Sbjct 164 ASSFYSPISLVGGILANETDKLF--SERRK 191 >gi|291326525|ref|ZP_06124898.2| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] gi|291314071|gb|EFE54524.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] Length=169 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/138 (30%), Positives = 69/138 (50%), Gaps = 5/138 (3%) Query 24 AMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMS--TLP 81 A+ LA D A++ PFGA L+ + +G N D HAE ++R S + Sbjct 27 ALALATDAAKNGNEPFGAVLVKNNQV-VMTGENHIHTESDPTYHAELGLIRQYCSEHKVM 85 Query 82 ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAASTRP 141 +LS++ L ++ EPC MC+ A V S + +++ S + L + F I + + ++ A S P Sbjct 86 DLSDYTLYTSCEPCCMCSGAMVWSQLGRMVYSLSHDELAEIAGFNIMLGSDEIFAKS--P 143 Query 142 TRPSVYSGFLSHKTDLLY 159 +P V G L + +Y Sbjct 144 FKPEVVKGVLKEQAISIY 161 >gi|225558752|gb|EEH07036.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length=197 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 50/85 (59%), Gaps = 1/85 (1%) Query 76 AMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVV 135 ++ L L + AE CPMCAAA +G + ++GTS+ETLI+ GW QIRIS+ V Sbjct 109 SLEALEAFKEFTLYTNAESCPMCAAAIRWAGFKEYVYGTSMETLIRMGWPQIRISSRGVF 168 Query 136 AAST-RPTRPSVYSGFLSHKTDLLY 159 ST P+ ++ G L ++TD + Sbjct 169 EHSTGLPSSSNIIGGILMNETDTYF 193 >gi|193213141|ref|YP_001999094.1| zinc-binding CMP/dCMP deaminase [Chlorobaculum parvum NCIB 8327] gi|193086618|gb|ACF11894.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] Length=152 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/147 (35%), Positives = 65/147 (45%), Gaps = 16/147 (10%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 +E A AI P GA +LD L G N D AHAE L +AM+TL Sbjct 8 MELAFREAIKAYESKEVPVGAVVLDPNGLVIGRGYNQVETLSDATAHAEMIALTSAMATL 67 Query 81 PE--LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISAS----DV 134 L L T EPCPMCA A VLS + ++FG W ++ AS +V Sbjct 68 DNKYLEGCTLAVTLEPCPMCAGAIVLSKISRVVFGA---------W-DPKMGASGTVLNV 117 Query 135 VAASTRPTRPSVYSGFLSHKTDLLYRN 161 S +P VY G + HK + L ++ Sbjct 118 TGCSALNHQPEVYGGIMEHKAESLLQD 144 >gi|270284659|ref|ZP_05966459.2| cytidine/deoxycytidylate deaminase family protein [Bifidobacterium gallicum DSM 20093] gi|270276606|gb|EFA22460.1| cytidine/deoxycytidylate deaminase family protein [Bifidobacterium gallicum DSM 20093] Length=170 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/132 (34%), Positives = 59/132 (45%), Gaps = 8/132 (6%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 +E+A+ A+ +H P GA +LD G N + D AHAE +R A +TL Sbjct 28 MESAIAQALQAKQHGDVPIGACVLDAGGRVIGRGHNMRERNLDPLAHAEIEAMREAAATL 87 Query 81 P--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 L + L+ T EPCPMCA A + + V I+FG L CG S D+ Sbjct 88 GSWNLEDCTLVVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACG------SVWDLPRDP 141 Query 139 TRPTRPSVYSGF 150 P VY G Sbjct 142 HIGAHPEVYGGI 153 >gi|237784829|ref|YP_002905534.1| putative cytosine/adenosine deaminase [Corynebacterium kroppenstedtii DSM 44385] gi|237757741|gb|ACR16991.1| putative cytosine/adenosine deaminase [Corynebacterium kroppenstedtii DSM 44385] Length=163 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/108 (38%), Positives = 54/108 (50%), Gaps = 6/108 (5%) Query 22 EAAMELAIDTARH---ATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMS 78 E M++A+D A+ P GA ++D + G N +GD AHAE LRAA Sbjct 16 ERWMQMALDVAKRTPPGDVPVGAVVVDASGHVVGEGCNERESTGDPTAHAEVIALRAAAR 75 Query 79 TLPE---LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCG 123 + + L NH L+ T EPC MCA A+V S + IIFG CG Sbjct 76 EVGDGWRLENHTLVVTLEPCVMCAGAAVTSRIGGIIFGAYEPKTGACG 123 >gi|194333451|ref|YP_002015311.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271] gi|194311269|gb|ACF45664.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM 271] Length=154 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 50/153 (33%), Positives = 63/153 (42%), Gaps = 12/153 (7%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 +E A AI P GA + D G N D AHAE L +AM+TL Sbjct 7 MEQAFREAIKAYEKKEIPVGAVVFDSNGSIVGRGYNQVEALSDATAHAEIIALTSAMATL 66 Query 81 --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 LS+ L T EPCPMCA A V + V +IFG + CG + ++ Sbjct 67 GSKYLSDCTLAVTLEPCPMCAGAIVNAKVGRLIFGAYDPKMGACG------TVMNITGNR 120 Query 139 TRPTRPSVYSGFLSHKTDLL----YRNSENRRA 167 +P VY G L HK L +R NR Sbjct 121 QLNHQPEVYGGILEHKAQSLLQDFFRGLRNREG 153 >gi|189499637|ref|YP_001959107.1| zinc-binding CMP/dCMP deaminase [Chlorobium phaeobacteroides BS1] gi|189495078|gb|ACE03626.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1] Length=156 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/144 (33%), Positives = 62/144 (44%), Gaps = 8/144 (5%) Query 20 IIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMST 79 +E A AI P GA + D G N D AHAE L +AM+T Sbjct 6 FMEPAFREAIKAYEKKEVPVGAVVFDANGHIIGRGYNQVEALTDATAHAEMIALTSAMAT 65 Query 80 L--PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAA 137 L LS+ L T EPCPMCA A V + V ++FG + CG + ++ A+ Sbjct 66 LGSKYLSDCTLAVTLEPCPMCAGAIVNAKVGRVVFGAYDAKMGACG------TVMNITAS 119 Query 138 STRPTRPSVYSGFLSHKTDLLYRN 161 +P VY G L HK L + Sbjct 120 RDLNHQPEVYGGILEHKAQSLLQE 143 >gi|336118608|ref|YP_004573377.1| putative deaminase [Microlunatus phosphovorus NM-1] gi|334686389|dbj|BAK35974.1| putative deaminase [Microlunatus phosphovorus NM-1] Length=155 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 37/93 (40%), Positives = 51/93 (55%), Gaps = 5/93 (5%) Query 25 MELAIDTARHA----TAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 ++LAI+ AR A PFGA L D + S NT D HAETN++R A T+ Sbjct 7 LDLAIEQARLARQAGNHPFGAVLSDPSGTVVLSAQNTVMTDSDATGHAETNLVRLASRTI 66 Query 81 -PELSNHVLISTAEPCPMCAAASVLSGVRAIIF 112 P L+ + + S+ EPC MCA A SG+ ++F Sbjct 67 GPNLAGYAIYSSTEPCAMCAGAIYWSGITKVVF 99 >gi|302408545|ref|XP_003002107.1| FCY1p [Verticillium albo-atrum VaMs.102] gi|261359028|gb|EEY21456.1| FCY1p [Verticillium albo-atrum VaMs.102] Length=239 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/143 (30%), Positives = 71/143 (50%), Gaps = 20/143 (13%) Query 37 APFGAALLDVTTLR----AFSGGNTYFESGDRFAHAETNVLRAAMSTLPE---------- 82 APFG +++ T +G NT +SG+ H E + L + Sbjct 69 APFGTVIVNHTVSGRGGIVCTGENTSHQSGNPIMHGEMAAIANCSHILTDPTGPYNMTVA 128 Query 83 -----LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAA 137 S+ + + AE CPMCA+A +G R ++GTSI+ L++ GW QIRI++ +V A Sbjct 129 EALAAFSDLTIYTNAESCPMCASAIRWAGFREYVYGTSIDELVRRGWDQIRIASREVFAM 188 Query 138 STR-PTRPSVYSGFLSHKTDLLY 159 S P + ++ L+++T+ L+ Sbjct 189 SVDLPRQTALIGAVLTNETNPLF 211 >gi|78188173|ref|YP_378511.1| cytosine deaminase [Chlorobium chlorochromatii CaD3] gi|78170372|gb|ABB27468.1| tRNA-adenosine deaminase [Chlorobium chlorochromatii CaD3] Length=153 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/142 (34%), Positives = 64/142 (46%), Gaps = 8/142 (5%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 + AA+ AI P GA +LD G N D AHAE L AAM+TL Sbjct 8 MSAALREAIKAYEQREVPVGAVVLDSNGHIIGRGHNQVETLHDATAHAEMIALTAAMATL 67 Query 81 PE--LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 L + L T EPCPMCA A V + V +IFG + CG + I+ + V+ Sbjct 68 GNKYLDDCTLAVTMEPCPMCAGAIVNAKVGRVIFGAYDSKMGACGTV-LNITGNRVL--- 123 Query 139 TRPTRPSVYSGFLSHKTDLLYR 160 +P V+ G + HK L + Sbjct 124 --NHQPEVFGGIMEHKCQELLQ 143 >gi|225352824|ref|ZP_03743847.1| hypothetical protein BIFPSEUDO_04457 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156335|gb|EEG69904.1| hypothetical protein BIFPSEUDO_04457 [Bifidobacterium pseudocatenulatum DSM 20438] Length=149 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/108 (38%), Positives = 53/108 (50%), Gaps = 2/108 (1%) Query 18 ADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAM 77 +D +E A+ELA + A P GA +LD SG N D AHAE + A Sbjct 4 SDDMELAIELAREAAAEGEVPVGAVVLDAGGAVIGSGRNLREAHADPLAHAEVKAMTQAA 63 Query 78 STLP--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCG 123 +L L++ LI T EPCPMCA A + + V I+FG L CG Sbjct 64 RSLGTWNLADCTLIVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACG 111 >gi|311741106|ref|ZP_07714931.1| cytidine and deoxycytidylate deaminase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303908|gb|EFQ79986.1| cytidine and deoxycytidylate deaminase [Corynebacterium pseudogenitalium ATCC 33035] Length=143 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/143 (35%), Positives = 63/143 (45%), Gaps = 12/143 (8%) Query 25 MELAIDTARHATA---PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTLP 81 M A+D A+ A A P GA L D +G N E D AHAE +R A+ Sbjct 1 MRRALDVAKRAPAGDVPVGAVLYDAAGTELATGVNRREELADPTAHAEVEAIRQAVRVHG 60 Query 82 E---LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 + LS L+ T EPC MCA A + V +++FG CG S DV+ A Sbjct 61 DGWRLSGCELVVTLEPCAMCAGALQAARVSSVVFGAFEPKTGACG------SLIDVLRAP 114 Query 139 TRPTRPSVYSGFLSHKTDLLYRN 161 T P P V G L + L RN Sbjct 115 TAPFTPQVRGGVLEGECAGLLRN 137 >gi|325110159|ref|YP_004271227.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces brasiliensis DSM 5305] gi|324970427|gb|ADY61205.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces brasiliensis DSM 5305] Length=154 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/157 (32%), Positives = 76/157 (49%), Gaps = 19/157 (12%) Query 16 VTADIIEAAMELAIDTARHATA-PFGAALLDVTTLRAFSGGNTYFESG-DRFA-----HA 68 ++A+I M AI+ A H PFGA + SG T G +R + H Sbjct 2 ISAEIDARIMRRAIELAEHNRQFPFGAVITQ-------SGSETILAEGWNRGSENPTWHG 54 Query 69 ETNVLRAAMS--TLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQ 126 E + S P+ + L +TAEPCPMC +A +G+ +++GTSI TLI G+ Q Sbjct 55 EIVAINDFFSREQQPDTESLTLYTTAEPCPMCQSAIHWAGIDRVVYGTSIPTLISLGFQQ 114 Query 127 IRISASDVVAASTRPTRP-SVYSGFLSHKTDLLYRNS 162 I + ASD+ + P + + G L + D L++ + Sbjct 115 ISLRASDIQCRA--PFQECELTGGLLKEECDQLFKQA 149 >gi|336321999|ref|YP_004601967.1| CMP/dCMP deaminase zinc-binding protein [Cellvibrio gilvus ATCC 13127] gi|336105580|gb|AEI13399.1| CMP/dCMP deaminase zinc-binding protein [Cellvibrio gilvus ATCC 13127] Length=145 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/143 (35%), Positives = 61/143 (43%), Gaps = 12/143 (8%) Query 25 MELAIDTARHATA----PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 M LA+D ARHA A P GA ++D G N GD HAE LRAA L Sbjct 1 MGLALDEARHAVATGDVPVGAVVVDQHGAVVGRGRNVREADGDPTGHAEVQALRAAAEAL 60 Query 81 PE--LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 L + L+ T EPC MCA A+VL+ + ++ G CG S DVV Sbjct 61 GRWRLDDCTLVVTLEPCLMCAGATVLARIPRLVLGAWDPKAGACG------SQWDVVRDR 114 Query 139 TRPTRPSVYSGFLSHKTDLLYRN 161 R V G + L R+ Sbjct 115 RVNHRVEVVGGVREDECATLLRH 137 >gi|255324366|ref|ZP_05365485.1| tRNA-specific adenosine deaminase [Corynebacterium tuberculostearicum SK141] gi|255298585|gb|EET77883.1| tRNA-specific adenosine deaminase [Corynebacterium tuberculostearicum SK141] Length=143 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/143 (35%), Positives = 62/143 (44%), Gaps = 12/143 (8%) Query 25 MELAIDTARHATA---PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTLP 81 M A+D A+ A P GA L D +G N E D AHAE +R A+ Sbjct 1 MRRALDVAKRTPAGDVPVGAVLYDAAGTELATGVNRREELADPTAHAEVEAIRQAVRVHG 60 Query 82 E---LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 + LS L+ T EPC MCA A + V +++FG CG S DV+ A Sbjct 61 DGWRLSGCELVVTLEPCAMCAGALQAARVGSVVFGAFEPKTGACG------SLIDVLRAP 114 Query 139 TRPTRPSVYSGFLSHKTDLLYRN 161 T P P V G L + L RN Sbjct 115 TAPFTPQVRGGVLEEECAALLRN 137 >gi|291455623|ref|ZP_06595013.1| cytidine and deoxycytidylate deaminase family protein [Bifidobacterium breve DSM 20213] gi|291382551|gb|EFE90069.1| cytidine and deoxycytidylate deaminase family protein [Bifidobacterium breve DSM 20213] Length=152 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/107 (38%), Positives = 51/107 (48%), Gaps = 2/107 (1%) Query 19 DIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMS 78 +++ A+ELA A P GA ++D G NT GD AHAE +R A Sbjct 8 EMMHGALELAKRAAAAGDVPVGAVVVDADGQIIGRGYNTREADGDPLAHAEIIAMREAAR 67 Query 79 TLP--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCG 123 L LS+ L T EPCPMCA A V + + I+FG L CG Sbjct 68 ALGSWNLSDCTLAVTLEPCPMCAGACVQTHIGTIVFGAWDSKLGACG 114 >gi|333110575|gb|AEF27591.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bifidobacterium breve ACS-071-V-Sch8b] Length=152 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/107 (38%), Positives = 51/107 (48%), Gaps = 2/107 (1%) Query 19 DIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMS 78 +++ A+ELA A P GA ++D G NT GD AHAE +R A Sbjct 8 EMMHGALELAKRAAAAGDVPVGAVVVDADGQIIGRGYNTREADGDPLAHAEIIAMREAAR 67 Query 79 TLP--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCG 123 L LS+ L T EPCPMCA A V + + I+FG L CG Sbjct 68 ALGSWNLSDCTLAVTLEPCPMCAGACVQTHIGTIVFGAWDSKLGACG 114 >gi|297243273|ref|ZP_06927208.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis AMD] gi|296888807|gb|EFH27544.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis AMD] Length=153 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/143 (33%), Positives = 66/143 (47%), Gaps = 8/143 (5%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLR-AAMST 79 + A+ LA ++A P GA +LD G N +S D AHAE ++ AA+S Sbjct 11 MNQALNLARESASAGEVPVGAVVLDGGGNIIGKGANMREQSADPLAHAEVLAMKDAAISR 70 Query 80 LP-ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 LS+ L+ T EPCPMCA A + + ++ +IFG L CG S D++ Sbjct 71 KSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGACG------SVWDILRDP 124 Query 139 TRPTRPSVYSGFLSHKTDLLYRN 161 +RP V + L RN Sbjct 125 HVGSRPEVIGSVCESECARLLRN 147 >gi|283783769|ref|YP_003374523.1| cytidine and deoxycytidylate deaminase zinc-binding region [Gardnerella vaginalis 409-05] gi|283442021|gb|ADB14487.1| cytidine and deoxycytidylate deaminase zinc-binding region [Gardnerella vaginalis 409-05] Length=153 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/142 (31%), Positives = 67/142 (48%), Gaps = 8/142 (5%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 + A+ LA ++A P GA +LD + G N +S D AHAE ++ A ++ Sbjct 11 MNQALNLARESASAGEVPVGAVVLDGSGNIIGKGANMREQSADPLAHAEVLAMKDAATSR 70 Query 81 P--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCG--WFQIRI----SAS 132 LS+ L+ T EPCPMCA A + + ++ +IFG L CG W +R S Sbjct 71 KSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGACGSVWDILRDPHVGSRP 130 Query 133 DVVAASTRPTRPSVYSGFLSHK 154 +V+ + P F +H+ Sbjct 131 EVIGSVCEPECAQPLRTFFAHQ 152 >gi|21673220|ref|NP_661285.1| cytosine deaminase, putative [Chlorobium tepidum TLS] gi|21646303|gb|AAM71627.1| cytosine deaminase, putative [Chlorobium tepidum TLS] Length=152 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/143 (32%), Positives = 63/143 (45%), Gaps = 8/143 (5%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 +E A AI P GA +LD L G N D AHAE L +AM+T+ Sbjct 8 MELAFREAIKAYESKEVPVGAVVLDPNGLIIGRGYNQVETLSDATAHAEMIALTSAMATI 67 Query 81 --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 L L T EPCPMCA A VLS + ++FG + G + ++ A + Sbjct 68 GSKYLEGCTLAVTLEPCPMCAGAIVLSKISRVVFGAWDPKMGAAG------TVLNITACN 121 Query 139 TRPTRPSVYSGFLSHKTDLLYRN 161 +P VY G + K + L ++ Sbjct 122 ALNHQPEVYGGIMERKAESLLQD 144 >gi|293375825|ref|ZP_06622095.1| putative guanine deaminase [Turicibacter sanguinis PC909] gi|292645602|gb|EFF63642.1| putative guanine deaminase [Turicibacter sanguinis PC909] Length=154 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/111 (31%), Positives = 61/111 (55%), Gaps = 8/111 (7%) Query 21 IEAAMELAIDTARHAT-----APFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA 75 +E M++AI+ A + PFGA ++ + A NT + D HAE N +R Sbjct 1 MEKYMKMAIEEAENGVKCKHGGPFGAVIVKDNQVIA-KAHNTVVKENDPTCHAEINAIRL 59 Query 76 AMSTLP--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGW 124 A TL +L++ +L +++EPCPMC +A + +G+ + +G ++E + G+ Sbjct 60 ASRTLNTFKLNDCLLFTSSEPCPMCLSAILWAGIETVYYGCTVEDANKIGF 110 >gi|325838575|ref|ZP_08166576.1| guanine deaminase [Turicibacter sp. HGF1] gi|325490801|gb|EGC93104.1| guanine deaminase [Turicibacter sp. HGF1] Length=154 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/111 (31%), Positives = 61/111 (55%), Gaps = 8/111 (7%) Query 21 IEAAMELAIDTARHAT-----APFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA 75 +E M++AI+ A + PFGA ++ + A NT + D HAE N +R Sbjct 1 MEKYMKMAIEEAENGVKCKHGGPFGAVIVKDNQVIA-KAHNTVVKENDPTCHAEINAIRL 59 Query 76 AMSTLP--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGW 124 A TL +L++ +L +++EPCPMC +A + +G+ + +G ++E + G+ Sbjct 60 ASRTLNTFKLNDCLLFTSSEPCPMCLSAILWAGIETVYYGCTVEDANKIGF 110 >gi|183597629|ref|ZP_02959122.1| hypothetical protein PROSTU_00918 [Providencia stuartii ATCC 25827] gi|188022897|gb|EDU60937.1| hypothetical protein PROSTU_00918 [Providencia stuartii ATCC 25827] Length=157 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/129 (30%), Positives = 61/129 (48%), Gaps = 5/129 (3%) Query 33 RHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMS--TLPELSNHVLIS 90 + PFGA L+ + +G N D HAE ++R S + LS + L + Sbjct 24 KKGNEPFGAVLVKDNQV-VMTGENHIHTESDPTYHAELGLIRQYCSEHKIMNLSEYTLYT 82 Query 91 TAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAASTRPTRPSVYSGF 150 + EPC MC+ A V S + +++ S + L + F I + + ++ A S P +P V G Sbjct 83 SCEPCCMCSGAMVWSQLGRMVYSLSHDELAEIAGFNIMLGSDEIFAKS--PFKPEVTHGV 140 Query 151 LSHKTDLLY 159 L K L+Y Sbjct 141 LKEKAMLIY 149 >gi|46204383|ref|ZP_00209388.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum magnetotacticum MS-1] Length=111 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/94 (38%), Positives = 52/94 (56%), Gaps = 3/94 (3%) Query 24 AMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTLP-- 81 A+ LA+D+ HA PFGA L+ + F G N + D AHAE +R A + L Sbjct 14 AVALAVDSVAHAGGPFGAVLVTADG-QVFEGNNRVTQDNDPTAHAEVTAIRRACAALGTF 72 Query 82 ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTS 115 +L+ L S+ EPCPMC A+++ + V A+ + T Sbjct 73 DLTGATLYSSCEPCPMCLASALWARVHAVHYATD 106 >gi|78186386|ref|YP_374429.1| cytosine deaminase [Chlorobium luteolum DSM 273] gi|78166288|gb|ABB23386.1| tRNA-adenosine deaminase [Chlorobium luteolum DSM 273] Length=153 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 50/150 (34%), Positives = 69/150 (46%), Gaps = 14/150 (9%) Query 25 MELAIDTARHA----TAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 MELA AR A P GA +LD ++ G N D AHAE L AAM+TL Sbjct 7 MELAFREARKAFEAGEVPVGAVVLDASSHVVGRGYNQVETLSDATAHAEIIALTAAMATL 66 Query 81 PE--LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 L++ L+ T EPCPMCA A V + V ++FG + G S +V Sbjct 67 GNKYLNDCTLVVTLEPCPMCAGAIVNAKVGRVVFGAYDPKMGAAG------SVLNVTGCR 120 Query 139 TRPTRPSVYSGFLSHKTDLLYRN--SENRR 166 +P V+ G + + L ++ +E RR Sbjct 121 ALNHQPEVFGGIMEARAQGLLQDFFAELRR 150 >gi|73539205|ref|YP_299572.1| cytidine/deoxycytidylate deaminase zinc-binding subunit [Ralstonia eutropha JMP134] gi|72122542|gb|AAZ64728.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ralstonia eutropha JMP134] Length=152 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/95 (37%), Positives = 52/95 (55%), Gaps = 3/95 (3%) Query 20 IIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMST 79 ++ A+ELA+ R PFGA +L + +G N S D HAE +RAA Sbjct 7 LMREAVELAVTNLRRGGRPFGA-VLAIDGEAVATGVNDIVHSHDPTTHAEMEAVRAAARK 65 Query 80 L--PELSNHVLISTAEPCPMCAAASVLSGVRAIIF 112 L P+LS V+ ++ PCPMC AA ++GV+A+ + Sbjct 66 LGRPDLSGSVVYASGHPCPMCLAAMTMAGVQAVYY 100 >gi|298252974|ref|ZP_06976766.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis 5-1] gi|297532369|gb|EFH71255.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis 5-1] Length=153 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/143 (31%), Positives = 64/143 (45%), Gaps = 8/143 (5%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 + A+ LA ++A P GA +LD G N +S D AHAE ++ A ++ Sbjct 11 MNQALNLARESASAGEVPVGAVVLDGGGNIIGKGANMREQSADPLAHAEVLAMKDAAASR 70 Query 81 P--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 LS+ L+ T EPCPMCA A + + ++ +IFG L CG S D++ Sbjct 71 KSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGACG------SVWDILRDP 124 Query 139 TRPTRPSVYSGFLSHKTDLLYRN 161 +RP V + RN Sbjct 125 HVGSRPEVIGSVCESECAQPLRN 147 >gi|294790273|ref|ZP_06755431.1| tRNA-specific adenosine deaminase [Scardovia inopinata F0304] gi|294458170|gb|EFG26523.1| tRNA-specific adenosine deaminase [Scardovia inopinata F0304] Length=185 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/172 (34%), Positives = 75/172 (44%), Gaps = 20/172 (11%) Query 12 ADSGVTADII-------EAAMELAIDTA-RHATA---PFGAALLDVTTLRAFSGGNTYFE 60 +D G++ D + E AM LA+ A R A A P GA LLD G N Sbjct 19 SDDGLSGDGLPEESLSDEQAMALALKNAVRAAQAGDVPVGAVLLDNRGRLISQGYNQRQA 78 Query 61 SGDRFAHAETNVLRAAMSTLPE--LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIET 118 D +HAE LRAA + L+ LI T EPCPMCA A+V + I+FGT Sbjct 79 RADPLSHAEIEALRAAGQVKGDWNLAGCSLIVTMEPCPMCAGAAVSVHLGRIVFGTWDPK 138 Query 119 LIQCGWFQIRISASDVVAASTRPTRPSVYSGFLSHK-TDLLYRNSENRRAMN 169 + CG S D+ ++P V G L + LL + R+ N Sbjct 139 MGACG------SVWDIPRDPHVGSQPEVVGGILRQDCSRLLSHFFQKTRSQN 184 >gi|212716206|ref|ZP_03324334.1| hypothetical protein BIFCAT_01122 [Bifidobacterium catenulatum DSM 16992] gi|212660866|gb|EEB21441.1| hypothetical protein BIFCAT_01122 [Bifidobacterium catenulatum DSM 16992] Length=149 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/116 (37%), Positives = 53/116 (46%), Gaps = 9/116 (7%) Query 10 WSADSGVTADIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAE 69 WS D G+ A+ELA + A P GA +LD G N D AHAE Sbjct 3 WSDDMGL-------AIELAREAAAEGEVPVGAVVLDAGGAVIGRGRNLREAHADPLAHAE 55 Query 70 TNVLRAAMSTLP--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCG 123 + A +L L++ LI T EPCPMCA A + + V I+FG L CG Sbjct 56 VKAMTQAARSLGTWNLADCTLIVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACG 111 >gi|339480065|gb|ABE96532.1| tRNA-specific adenosine deaminase [Bifidobacterium breve UCC2003] Length=149 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/107 (36%), Positives = 51/107 (48%), Gaps = 2/107 (1%) Query 19 DIIEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMS 78 +++ A+ELA A P GA +++ G NT GD AHAE +R A Sbjct 5 EMMHGALELAKRAAAAGDVPVGAVVVNADGQIIGRGYNTREADGDPLAHAEIIAMREAAR 64 Query 79 TLP--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCG 123 L LS+ L T EPCPMCA A + + + I+FG L CG Sbjct 65 ALGSWNLSDCTLAVTLEPCPMCAGACIQTHIGTIVFGAWDSKLGACG 111 >gi|311742000|ref|ZP_07715810.1| cytidine and deoxycytidylate deaminase [Aeromicrobium marinum DSM 15272] gi|311314493|gb|EFQ84400.1| cytidine and deoxycytidylate deaminase [Aeromicrobium marinum DSM 15272] Length=149 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/144 (35%), Positives = 62/144 (44%), Gaps = 12/144 (8%) Query 24 AMELAIDTARHA----TAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMST 79 AM LA++ AR A P GA +LD G NT GD HAE LR A Sbjct 6 AMRLALEEARAALDTGDVPVGAVVLDPAGDVIGRGRNTRERDGDPLGHAEVVALREAAER 65 Query 80 LPE--LSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAA 137 + L L+ T EPC MCA A V + V ++FG + G S DVV Sbjct 66 TGQWRLEGCTLVVTLEPCTMCAGALVGARVDRLVFGAWDDKAGAVG------SLWDVVRD 119 Query 138 STRPTRPSVYSGFLSHKTDLLYRN 161 RP V SG L+ ++ L R Sbjct 120 RRLNHRPEVVSGVLADESATLLRE 143 >gi|11068000|gb|AAG28837.1| cytosine deaminase [Bifidobacterium longum] Length=143 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/105 (38%), Positives = 48/105 (46%), Gaps = 2/105 (1%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 + A+ELA A P GA +LD G NT GD AHAE +R A L Sbjct 1 MRCALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQAL 60 Query 81 P--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCG 123 L++ L T EPCPMCA A + + + I FG L CG Sbjct 61 GAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACG 105 >gi|322690120|ref|YP_004209854.1| cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. infantis 157F] gi|320461456|dbj|BAJ72076.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. infantis 157F] Length=149 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/105 (38%), Positives = 48/105 (46%), Gaps = 2/105 (1%) Query 21 IEAAMELAIDTARHATAPFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 + A+ELA A P GA +LD G NT GD AHAE +R A L Sbjct 7 MRCALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQAL 66 Query 81 P--ELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCG 123 L++ L T EPCPMCA A + + + I FG L CG Sbjct 67 GAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACG 111 Lambda K H 0.320 0.130 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 149040830208 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40