BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3118
Length=100
Score E
Sequences producing significant alignments: (Bits) Value
gi|308232340|ref|ZP_07415766.2| hypothetical protein sseC1 [Myco... 199 9e-50
gi|15607954|ref|NP_215329.1| hypothetical protein Rv0814c [Mycob... 199 1e-49
gi|289756901|ref|ZP_06516279.1| conserved hypothetical protein [... 197 4e-49
gi|306806669|ref|ZP_07443337.1| hypothetical protein TMGG_04071 ... 195 2e-48
gi|306796603|ref|ZP_07434905.1| hypothetical protein TMFG_04059 ... 193 8e-48
gi|254821038|ref|ZP_05226039.1| SseC [Mycobacterium intracellula... 192 1e-47
gi|342860290|ref|ZP_08716941.1| hypothetical protein MCOL_15486 ... 190 6e-47
gi|306774937|ref|ZP_07413274.1| hypothetical protein TMAG_03928 ... 189 1e-46
gi|41406742|ref|NP_959578.1| SseC [Mycobacterium avium subsp. pa... 189 2e-46
gi|183984837|ref|YP_001853128.1| sulphur metabolism protein, Sse... 186 1e-45
gi|240173188|ref|ZP_04751846.1| sulphur metabolism protein, SseC... 186 1e-45
gi|118616280|ref|YP_904612.1| sulphur metabolism protein, SseC2 ... 185 2e-45
gi|336458330|gb|EGO37309.1| Protein of unknown function (DUF1416... 184 3e-45
gi|145222237|ref|YP_001132915.1| hypothetical protein Mflv_1645 ... 184 5e-45
gi|120406050|ref|YP_955879.1| hypothetical protein Mvan_5102 [My... 181 2e-44
gi|108801493|ref|YP_641690.1| hypothetical protein Mmcs_4530 [My... 181 4e-44
gi|307078697|ref|ZP_07487867.1| hypothetical protein TMKG_04087 ... 179 2e-43
gi|308370502|ref|ZP_07421801.2| hypothetical protein TMCG_04017 ... 177 3e-43
gi|308369438|ref|ZP_07417771.2| hypothetical protein sseC1 [Myco... 176 1e-42
gi|169627840|ref|YP_001701489.1| hypothetical protein MAB_0739c ... 176 1e-42
gi|306966848|ref|ZP_07479509.1| hypothetical protein TMIG_04014 ... 174 5e-42
gi|699208|gb|AAA62972.1| u2266j [Mycobacterium leprae] 173 8e-42
gi|15828178|ref|NP_302441.1| hypothetical protein ML2199 [Mycoba... 172 1e-41
gi|118465007|ref|YP_880030.1| SseC protein [Mycobacterium avium ... 172 1e-41
gi|296166429|ref|ZP_06848861.1| SseC protein [Mycobacterium para... 171 2e-41
gi|308370501|ref|ZP_07421799.2| hypothetical protein TMCG_04015 ... 161 3e-38
gi|308375255|ref|ZP_07443317.2| hypothetical protein sseC2 [Myco... 161 3e-38
gi|308374777|ref|ZP_07437367.2| hypothetical protein sseC1 [Myco... 159 1e-37
gi|118468699|ref|YP_890018.1| SseC protein [Mycobacterium smegma... 155 2e-36
gi|306809099|ref|ZP_07445767.1| hypothetical protein sseC1 [Myco... 154 5e-36
gi|333992186|ref|YP_004524800.1| sulfur metabolism protein SseC2... 153 8e-36
gi|308369960|ref|ZP_07419669.2| hypothetical protein sseC2 [Myco... 152 1e-35
gi|226308298|ref|YP_002768258.1| hypothetical protein RER_48110 ... 150 8e-35
gi|326384908|ref|ZP_08206583.1| hypothetical protein SCNU_18282 ... 149 1e-34
gi|343926099|ref|ZP_08765611.1| hypothetical protein GOALK_053_0... 149 2e-34
gi|54022560|ref|YP_116802.1| hypothetical protein nfa5930 [Nocar... 148 2e-34
gi|262203797|ref|YP_003275005.1| hypothetical protein Gbro_3938 ... 147 4e-34
gi|111021826|ref|YP_704798.1| hypothetical protein RHA1_ro04855 ... 145 3e-33
gi|312138318|ref|YP_004005654.1| hypothetical protein REQ_08550 ... 145 3e-33
gi|226364347|ref|YP_002782129.1| hypothetical protein ROP_49370 ... 144 5e-33
gi|333918414|ref|YP_004491995.1| SseC protein [Amycolicicoccus s... 144 5e-33
gi|317509399|ref|ZP_07967018.1| hypothetical protein HMPREF9336_... 140 5e-32
gi|296141223|ref|YP_003648466.1| hypothetical protein Tpau_3548 ... 139 1e-31
gi|296395424|ref|YP_003660308.1| hypothetical protein Srot_3053 ... 139 1e-31
gi|324999024|ref|ZP_08120136.1| hypothetical protein PseP1_09682... 131 3e-29
gi|226362415|ref|YP_002780193.1| hypothetical protein ROP_30010 ... 128 3e-28
gi|331694336|ref|YP_004330575.1| hypothetical protein Psed_0454 ... 125 1e-27
gi|238061318|ref|ZP_04606027.1| hypothetical protein MCAG_02284 ... 123 1e-26
gi|330470367|ref|YP_004408110.1| hypothetical protein VAB18032_0... 122 2e-26
gi|145592863|ref|YP_001157160.1| hypothetical protein Strop_0297... 122 2e-26
>gi|308232340|ref|ZP_07415766.2| hypothetical protein sseC1 [Mycobacterium tuberculosis SUMu001]
gi|308214213|gb|EFO73612.1| hypothetical protein sseC1 [Mycobacterium tuberculosis SUMu001]
Length=121
Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 100/100 (100%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 22 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 81
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT
Sbjct 82 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 121
>gi|15607954|ref|NP_215329.1| hypothetical protein Rv0814c [Mycobacterium tuberculosis H37Rv]
gi|15840227|ref|NP_335264.1| hypothetical protein MT0836 [Mycobacterium tuberculosis CDC1551]
gi|15842689|ref|NP_337726.1| hypothetical protein MT3200 [Mycobacterium tuberculosis CDC1551]
136 more sequence titles
Length=100
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/100 (100%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT
Sbjct 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
>gi|289756901|ref|ZP_06516279.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294996294|ref|ZP_06801985.1| hypothetical protein Mtub2_17766 [Mycobacterium tuberculosis
210]
gi|340625829|ref|YP_004744281.1| hypothetical protein MCAN_08151 [Mycobacterium canettii CIPT
140010059]
gi|289712465|gb|EFD76477.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|326904966|gb|EGE51899.1| hypothetical protein sseC2 [Mycobacterium tuberculosis W-148]
gi|339293830|gb|AEJ45941.1| hypothetical protein CCDC5079_0751 [Mycobacterium tuberculosis
CCDC5079]
gi|340004019|emb|CCC43155.1| conserved hypothetical protein SSEC2 [Mycobacterium canettii
CIPT 140010059]
Length=100
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI
Sbjct 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
>gi|306806669|ref|ZP_07443337.1| hypothetical protein TMGG_04071 [Mycobacterium tuberculosis SUMu007]
gi|308346858|gb|EFP35709.1| hypothetical protein TMGG_04071 [Mycobacterium tuberculosis SUMu007]
gi|323720736|gb|EGB29809.1| SseC protein [Mycobacterium tuberculosis CDC1551A]
Length=98
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVK 98
FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVK
Sbjct 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVK 98
>gi|306796603|ref|ZP_07434905.1| hypothetical protein TMFG_04059 [Mycobacterium tuberculosis SUMu006]
gi|306802464|ref|ZP_07439132.1| hypothetical protein TMHG_04070 [Mycobacterium tuberculosis SUMu008]
gi|306971060|ref|ZP_07483721.1| hypothetical protein TMJG_04085 [Mycobacterium tuberculosis SUMu010]
gi|308342971|gb|EFP31822.1| hypothetical protein TMFG_04059 [Mycobacterium tuberculosis SUMu006]
gi|308350795|gb|EFP39646.1| hypothetical protein TMHG_04070 [Mycobacterium tuberculosis SUMu008]
gi|308359387|gb|EFP48238.1| hypothetical protein TMJG_04085 [Mycobacterium tuberculosis SUMu010]
Length=97
Score = 193 bits (490), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDV 97
FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDV
Sbjct 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDV 97
>gi|254821038|ref|ZP_05226039.1| SseC [Mycobacterium intracellulare ATCC 13950]
Length=100
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/99 (97%), Positives = 97/99 (98%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCS PKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSAPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPGSWTLRALSAAGNG+AVV PSGAGIHEVDVKI
Sbjct 61 FRFFAAPGSWTLRALSAAGNGNAVVTPSGAGIHEVDVKI 99
>gi|342860290|ref|ZP_08716941.1| hypothetical protein MCOL_15486 [Mycobacterium colombiense CECT
3035]
gi|342131945|gb|EGT85186.1| hypothetical protein MCOL_15486 [Mycobacterium colombiense CECT
3035]
Length=100
Score = 190 bits (482), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/99 (96%), Positives = 96/99 (97%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCS PKQGLTLPASVDLEKETVITGRVVDG+GQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSAPKQGLTLPASVDLEKETVITGRVVDGEGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPGSWTLRALS AGNGDAVV PSGAGIHEVDVKI
Sbjct 61 FRFFAAPGSWTLRALSKAGNGDAVVAPSGAGIHEVDVKI 99
>gi|306774937|ref|ZP_07413274.1| hypothetical protein TMAG_03928 [Mycobacterium tuberculosis SUMu001]
gi|308216509|gb|EFO75908.1| hypothetical protein TMAG_03928 [Mycobacterium tuberculosis SUMu001]
Length=95
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%), Gaps = 0/95 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEV 95
FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEV
Sbjct 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEV 95
>gi|41406742|ref|NP_959578.1| SseC [Mycobacterium avium subsp. paratuberculosis K-10]
gi|254773695|ref|ZP_05215211.1| SseC [Mycobacterium avium subsp. avium ATCC 25291]
gi|41395092|gb|AAS02961.1| SseC [Mycobacterium avium subsp. paratuberculosis K-10]
Length=100
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/99 (95%), Positives = 96/99 (97%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCS PKQG+TLPASVDLEKETVITGRVVD DGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSAPKQGVTLPASVDLEKETVITGRVVDSDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPGSWTLRALSAAGNG+AVV PSGAGIHEVDVKI
Sbjct 61 FRFFAAPGSWTLRALSAAGNGNAVVTPSGAGIHEVDVKI 99
>gi|183984837|ref|YP_001853128.1| sulphur metabolism protein, SseC2 [Mycobacterium marinum M]
gi|183178163|gb|ACC43273.1| sulphur metabolism protein, SseC2 [Mycobacterium marinum M]
Length=100
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/99 (93%), Positives = 95/99 (96%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC+ PKQGLTLPASVDLEKETVITGRVVD DGQ VGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCTAPKQGLTLPASVDLEKETVITGRVVDRDGQTVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPGSWT+RALS AGNGDAVV+PSGAGIHEVDVKI
Sbjct 61 FRFFAAPGSWTVRALSKAGNGDAVVRPSGAGIHEVDVKI 99
>gi|240173188|ref|ZP_04751846.1| sulphur metabolism protein, SseC2 [Mycobacterium kansasii ATCC
12478]
Length=100
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/99 (93%), Positives = 95/99 (96%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC+ PKQGLTLPASVDLEKETVITGRVVD DGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCTAPKQGLTLPASVDLEKETVITGRVVDRDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPGSWT+RALS GNGDAVV+PSGAGIHEVDVKI
Sbjct 61 FRFFAAPGSWTVRALSKVGNGDAVVRPSGAGIHEVDVKI 99
>gi|118616280|ref|YP_904612.1| sulphur metabolism protein, SseC2 [Mycobacterium ulcerans Agy99]
gi|118568390|gb|ABL03141.1| sulphur metabolism protein, SseC2 [Mycobacterium ulcerans Agy99]
Length=100
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/99 (92%), Positives = 95/99 (96%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC+ PKQGLTLPASVDLEKETVITGRVVD DGQ +GGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCTAPKQGLTLPASVDLEKETVITGRVVDRDGQTIGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPGSWT+RALS AGNGDAVV+PSGAGIHEVDVKI
Sbjct 61 FRFFAAPGSWTVRALSKAGNGDAVVRPSGAGIHEVDVKI 99
>gi|336458330|gb|EGO37309.1| Protein of unknown function (DUF1416) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=97
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/97 (95%), Positives = 94/97 (97%), Gaps = 0/97 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCS PKQG+TLPASVDLEKETVITGRVVD DGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSAPKQGVTLPASVDLEKETVITGRVVDSDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDV 97
FRFFAAPGSWTLRALSAAGNG+AVV PSGAGIHEVDV
Sbjct 61 FRFFAAPGSWTLRALSAAGNGNAVVTPSGAGIHEVDV 97
>gi|145222237|ref|YP_001132915.1| hypothetical protein Mflv_1645 [Mycobacterium gilvum PYR-GCK]
gi|315442676|ref|YP_004075555.1| hypothetical protein Mspyr1_10310 [Mycobacterium sp. Spyr1]
gi|145214723|gb|ABP44127.1| protein of unknown function DUF1416 [Mycobacterium gilvum PYR-GCK]
gi|315260979|gb|ADT97720.1| Protein of unknown function (DUF1416) [Mycobacterium sp. Spyr1]
Length=100
Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/99 (92%), Positives = 94/99 (95%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCS PKQGLTLPASVDLEKETVITGRVVDG GQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSAPKQGLTLPASVDLEKETVITGRVVDGSGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPG+WTLRALS +GNGDA V PSGAGIHEVDVK+
Sbjct 61 FRFFAAPGTWTLRALSPSGNGDASVAPSGAGIHEVDVKV 99
>gi|120406050|ref|YP_955879.1| hypothetical protein Mvan_5102 [Mycobacterium vanbaalenii PYR-1]
gi|119958868|gb|ABM15873.1| protein of unknown function DUF1416 [Mycobacterium vanbaalenii
PYR-1]
Length=100
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/99 (90%), Positives = 93/99 (94%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCS PKQGLTLPA VDLEKETVITGRVVDG GQAVGGA+VRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSAPKQGLTLPAGVDLEKETVITGRVVDGSGQAVGGAYVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPG+WTLRALS AGNGDA + PSGAGIHEVDVK+
Sbjct 61 FRFFAAPGTWTLRALSPAGNGDASIAPSGAGIHEVDVKV 99
>gi|108801493|ref|YP_641690.1| hypothetical protein Mmcs_4530 [Mycobacterium sp. MCS]
gi|119870646|ref|YP_940598.1| hypothetical protein Mkms_4617 [Mycobacterium sp. KMS]
gi|126437478|ref|YP_001073169.1| hypothetical protein Mjls_4913 [Mycobacterium sp. JLS]
gi|108771912|gb|ABG10634.1| protein of unknown function DUF1416 [Mycobacterium sp. MCS]
gi|119696735|gb|ABL93808.1| protein of unknown function DUF1416 [Mycobacterium sp. KMS]
gi|126237278|gb|ABO00679.1| protein of unknown function DUF1416 [Mycobacterium sp. JLS]
Length=100
Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/99 (90%), Positives = 93/99 (94%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC+ PKQGLTLPASVDLEKETVITGRVVDG GQAVGGAFVRLLD+SDEFTAEVVASATGD
Sbjct 1 MCAPPKQGLTLPASVDLEKETVITGRVVDGSGQAVGGAFVRLLDASDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPG+WTLRALS GNGDA V PSGAGIHEVDVK+
Sbjct 61 FRFFAAPGTWTLRALSKVGNGDATVAPSGAGIHEVDVKV 99
>gi|307078697|ref|ZP_07487867.1| hypothetical protein TMKG_04087 [Mycobacterium tuberculosis SUMu011]
gi|308363380|gb|EFP52231.1| hypothetical protein TMKG_04087 [Mycobacterium tuberculosis SUMu011]
Length=90
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/90 (100%), Positives = 90/90 (100%), Gaps = 0/90 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGA 90
FRFFAAPGSWTLRALSAAGNGDAVVQPSGA
Sbjct 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGA 90
>gi|308370502|ref|ZP_07421801.2| hypothetical protein TMCG_04017 [Mycobacterium tuberculosis SUMu003]
gi|308331720|gb|EFP20571.1| hypothetical protein TMCG_04017 [Mycobacterium tuberculosis SUMu003]
Length=91
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/91 (99%), Positives = 91/91 (100%), Gaps = 0/91 (0%)
Query 9 LTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPG 68
+TLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPG
Sbjct 1 MTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPG 60
Query 69 SWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
SWTLRALSAAGNGDAVVQPSGAGIHEVDVKI
Sbjct 61 SWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 91
>gi|308369438|ref|ZP_07417771.2| hypothetical protein sseC1 [Mycobacterium tuberculosis SUMu002]
gi|308327607|gb|EFP16458.1| hypothetical protein sseC1 [Mycobacterium tuberculosis SUMu002]
Length=90
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/90 (99%), Positives = 90/90 (100%), Gaps = 0/90 (0%)
Query 11 LPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSW 70
+PASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSW
Sbjct 1 MPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSW 60
Query 71 TLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
TLRALSAAGNGDAVVQPSGAGIHEVDVKIT
Sbjct 61 TLRALSAAGNGDAVVQPSGAGIHEVDVKIT 90
>gi|169627840|ref|YP_001701489.1| hypothetical protein MAB_0739c [Mycobacterium abscessus ATCC
19977]
gi|169239807|emb|CAM60835.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=101
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/99 (86%), Positives = 91/99 (92%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCS PKQGL +PA VD+EKETVITGRVVDG+GQ VGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSAPKQGLAIPAGVDVEKETVITGRVVDGNGQTVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPG WTLRALS+AGNG A V P+GAGIHEVD+KI
Sbjct 61 FRFFAAPGDWTLRALSSAGNGTATVSPTGAGIHEVDIKI 99
>gi|306966848|ref|ZP_07479509.1| hypothetical protein TMIG_04014 [Mycobacterium tuberculosis SUMu009]
gi|308355452|gb|EFP44303.1| hypothetical protein TMIG_04014 [Mycobacterium tuberculosis SUMu009]
Length=94
Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/87 (100%), Positives = 87/87 (100%), Gaps = 0/87 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD
Sbjct 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQP 87
FRFFAAPGSWTLRALSAAGNGDAVVQP
Sbjct 61 FRFFAAPGSWTLRALSAAGNGDAVVQP 87
>gi|699208|gb|AAA62972.1| u2266j [Mycobacterium leprae]
Length=143
Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 91/100 (91%), Gaps = 0/100 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCS PKQ L LPA+V+LEKETVITGRVVD GQAVGGAFVRLLDSS+EFTAEVV SATGD
Sbjct 44 MCSEPKQRLALPANVNLEKETVITGRVVDRKGQAVGGAFVRLLDSSNEFTAEVVTSATGD 103
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
FRFFAAPGSWTLRALS+ GNGDA++ PSG GIH+VDVKIT
Sbjct 104 FRFFAAPGSWTLRALSSVGNGDAMMSPSGTGIHKVDVKIT 143
>gi|15828178|ref|NP_302441.1| hypothetical protein ML2199 [Mycobacterium leprae TN]
gi|221230655|ref|YP_002504071.1| hypothetical protein MLBr_02199 [Mycobacterium leprae Br4923]
gi|13093732|emb|CAC31154.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933762|emb|CAR72296.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=100
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 91/100 (91%), Gaps = 0/100 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MCS PKQ L LPA+V+LEKETVITGRVVD GQAVGGAFVRLLDSS+EFTAEVV SATGD
Sbjct 1 MCSEPKQRLALPANVNLEKETVITGRVVDRKGQAVGGAFVRLLDSSNEFTAEVVTSATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
FRFFAAPGSWTLRALS+ GNGDA++ PSG GIH+VDVKIT
Sbjct 61 FRFFAAPGSWTLRALSSVGNGDAMMSPSGTGIHKVDVKIT 100
>gi|118465007|ref|YP_880030.1| SseC protein [Mycobacterium avium 104]
gi|118166294|gb|ABK67191.1| SseC protein [Mycobacterium avium 104]
Length=92
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/91 (96%), Positives = 89/91 (98%), Gaps = 0/91 (0%)
Query 9 LTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPG 68
+TLPASVDLEKETVITGRVVD DGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPG
Sbjct 1 MTLPASVDLEKETVITGRVVDSDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPG 60
Query 69 SWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
SWTLRALSAAGNG+AVV PSGAGIHEVDVKI
Sbjct 61 SWTLRALSAAGNGNAVVTPSGAGIHEVDVKI 91
>gi|296166429|ref|ZP_06848861.1| SseC protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898190|gb|EFG77764.1| SseC protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=92
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/91 (95%), Positives = 89/91 (98%), Gaps = 0/91 (0%)
Query 9 LTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPG 68
+TLPASVDLEKETVITGRVVDG+GQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPG
Sbjct 1 MTLPASVDLEKETVITGRVVDGEGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPG 60
Query 69 SWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
SWTLRALSA GNG+AVV PSGAGIHEVDVKI
Sbjct 61 SWTLRALSAVGNGNAVVSPSGAGIHEVDVKI 91
>gi|308370501|ref|ZP_07421799.2| hypothetical protein TMCG_04015 [Mycobacterium tuberculosis SUMu003]
gi|308373633|ref|ZP_07433125.2| hypothetical protein TMEG_02394 [Mycobacterium tuberculosis SUMu005]
gi|308377519|ref|ZP_07479508.2| hypothetical protein sseC2 [Mycobacterium tuberculosis SUMu009]
gi|308331740|gb|EFP20591.1| hypothetical protein TMCG_04015 [Mycobacterium tuberculosis SUMu003]
gi|308336876|gb|EFP25727.1| hypothetical protein TMEG_02394 [Mycobacterium tuberculosis SUMu005]
gi|308355471|gb|EFP44322.1| hypothetical protein sseC2 [Mycobacterium tuberculosis SUMu009]
gi|323720774|gb|EGB29845.1| hypothetical protein TMMG_03870 [Mycobacterium tuberculosis CDC1551A]
Length=99
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)
Query 19 KETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAA 78
KETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAA
Sbjct 18 KETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAA 77
Query 79 GNGDAVVQPSGAGIHEVDVKIT 100
GNGDAVVQPSGAGIHEVDVKIT
Sbjct 78 GNGDAVVQPSGAGIHEVDVKIT 99
>gi|308375255|ref|ZP_07443317.2| hypothetical protein sseC2 [Mycobacterium tuberculosis SUMu007]
gi|308346895|gb|EFP35746.1| hypothetical protein sseC2 [Mycobacterium tuberculosis SUMu007]
Length=99
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)
Query 19 KETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAA 78
KETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAA
Sbjct 18 KETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAA 77
Query 79 GNGDAVVQPSGAGIHEVDVKIT 100
GNGDAVVQPSGAGIHEVDVKIT
Sbjct 78 GNGDAVVQPSGAGIHEVDVKIT 99
>gi|308374777|ref|ZP_07437367.2| hypothetical protein sseC1 [Mycobacterium tuberculosis SUMu006]
gi|308340702|gb|EFP29553.1| hypothetical protein sseC1 [Mycobacterium tuberculosis SUMu006]
Length=99
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/82 (99%), Positives = 81/82 (99%), Gaps = 0/82 (0%)
Query 19 KETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAA 78
K TVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAA
Sbjct 18 KRTVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAA 77
Query 79 GNGDAVVQPSGAGIHEVDVKIT 100
GNGDAVVQPSGAGIHEVDVKIT
Sbjct 78 GNGDAVVQPSGAGIHEVDVKIT 99
>gi|118468699|ref|YP_890018.1| SseC protein [Mycobacterium smegmatis str. MC2 155]
gi|302595981|sp|A0R4D0.1|Y5790_MYCS2 RecName: Full=Uncharacterized protein MSMEG_5790
gi|118169986|gb|ABK70882.1| SseC protein [Mycobacterium smegmatis str. MC2 155]
Length=90
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/89 (86%), Positives = 83/89 (94%), Gaps = 0/89 (0%)
Query 11 LPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSW 70
+PA VDLEKETVITGRVVDG GQAVGGAFVRLLD SDEFTAEVVASATGDFRFFAAPG+W
Sbjct 1 MPAGVDLEKETVITGRVVDGSGQAVGGAFVRLLDGSDEFTAEVVASATGDFRFFAAPGTW 60
Query 71 TLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
T+RALS+AGNG+ V P+GAGIHEVDVK+
Sbjct 61 TVRALSSAGNGNVTVAPTGAGIHEVDVKV 89
>gi|306809099|ref|ZP_07445767.1| hypothetical protein sseC1 [Mycobacterium tuberculosis SUMu007]
gi|308344438|gb|EFP33289.1| hypothetical protein sseC1 [Mycobacterium tuberculosis SUMu007]
Length=79
Score = 154 bits (389), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/79 (99%), Positives = 79/79 (100%), Gaps = 0/79 (0%)
Query 22 VITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAAGNG 81
+ITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAAGNG
Sbjct 1 MITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAAGNG 60
Query 82 DAVVQPSGAGIHEVDVKIT 100
DAVVQPSGAGIHEVDVKIT
Sbjct 61 DAVVQPSGAGIHEVDVKIT 79
>gi|333992186|ref|YP_004524800.1| sulfur metabolism protein SseC2 [Mycobacterium sp. JDM601]
gi|333488154|gb|AEF37546.1| sulfur metabolism protein SseC2 [Mycobacterium sp. JDM601]
Length=90
Score = 153 bits (387), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/89 (85%), Positives = 82/89 (93%), Gaps = 0/89 (0%)
Query 11 LPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSW 70
+PA+VDL KETVITGRVVD G VGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPG W
Sbjct 1 MPANVDLAKETVITGRVVDSSGATVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGLW 60
Query 71 TLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
T+RALS+AGNGDAVV PSGAG+HEVD+K+
Sbjct 61 TVRALSSAGNGDAVVSPSGAGLHEVDIKV 89
>gi|308369960|ref|ZP_07419669.2| hypothetical protein sseC2 [Mycobacterium tuberculosis SUMu002]
gi|308325861|gb|EFP14712.1| hypothetical protein sseC2 [Mycobacterium tuberculosis SUMu002]
Length=78
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/78 (99%), Positives = 78/78 (100%), Gaps = 0/78 (0%)
Query 23 ITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAAGNGD 82
+TGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAAGNGD
Sbjct 1 MTGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAAGNGD 60
Query 83 AVVQPSGAGIHEVDVKIT 100
AVVQPSGAGIHEVDVKIT
Sbjct 61 AVVQPSGAGIHEVDVKIT 78
>gi|226308298|ref|YP_002768258.1| hypothetical protein RER_48110 [Rhodococcus erythropolis PR4]
gi|229488437|ref|ZP_04382303.1| SseC protein [Rhodococcus erythropolis SK121]
gi|226187415|dbj|BAH35519.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229323941|gb|EEN89696.1| SseC protein [Rhodococcus erythropolis SK121]
Length=101
Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 82/100 (82%), Gaps = 0/100 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC P QG TLPA VD+EKETVITGRV+ DGQ +GGAFVRLLD S EFTAEVVAS TGD
Sbjct 1 MCGAPTQGQTLPAGVDVEKETVITGRVLAADGQPIGGAFVRLLDGSGEFTAEVVASGTGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
FRFFAAPG WT+RALS++GNG + V P G+G+H VDV ++
Sbjct 61 FRFFAAPGEWTVRALSSSGNGTSTVAPEGSGVHNVDVTVS 100
>gi|326384908|ref|ZP_08206583.1| hypothetical protein SCNU_18282 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196427|gb|EGD53626.1| hypothetical protein SCNU_18282 [Gordonia neofelifaecis NRRL
B-59395]
Length=101
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/99 (72%), Positives = 80/99 (81%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC+ PKQG TLPA VD EKETV+TG+VVDG G V GAFVRLLD + EFTAEVVASATGD
Sbjct 1 MCAAPKQGQTLPAGVDTEKETVLTGQVVDGSGNPVAGAFVRLLDGTGEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPG+WTLRALS+ GNGD + P G G+H DV +
Sbjct 61 FRFFAAPGTWTLRALSSQGNGDVTIAPEGPGVHNQDVTV 99
>gi|343926099|ref|ZP_08765611.1| hypothetical protein GOALK_053_00570 [Gordonia alkanivorans NBRC
16433]
gi|343764025|dbj|GAA12537.1| hypothetical protein GOALK_053_00570 [Gordonia alkanivorans NBRC
16433]
Length=101
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 82/100 (82%), Gaps = 0/100 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC+ PKQG LPA VD+EKETV+TG+V DG G V GAFVRLLDS+ EFTAEVVAS TGD
Sbjct 1 MCAAPKQGQKLPAGVDVEKETVLTGQVTDGSGNPVAGAFVRLLDSTGEFTAEVVASPTGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
FRFFAAPG+WT+RALS+ GNGDA + P G GIHE D+ ++
Sbjct 61 FRFFAAPGTWTVRALSSVGNGDASISPEGPGIHEQDIIVS 100
>gi|54022560|ref|YP_116802.1| hypothetical protein nfa5930 [Nocardia farcinica IFM 10152]
gi|54014068|dbj|BAD55438.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=101
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/99 (73%), Positives = 83/99 (84%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC+ P QG +PA VD+EKETVITGRV+ DGQ VGGAFVRLLD + +FTAEVVAS TGD
Sbjct 1 MCAAPTQGQAIPAGVDVEKETVITGRVLASDGQPVGGAFVRLLDGNGDFTAEVVASGTGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPG+WT+RALS+AGNG A V+P GAGIH VDV +
Sbjct 61 FRFFAAPGTWTVRALSSAGNGSAEVRPEGAGIHTVDVAV 99
>gi|262203797|ref|YP_003275005.1| hypothetical protein Gbro_3938 [Gordonia bronchialis DSM 43247]
gi|262087144|gb|ACY23112.1| protein of unknown function DUF1416 [Gordonia bronchialis DSM
43247]
Length=101
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 81/100 (81%), Gaps = 0/100 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC+ PKQG LPA VD+EKETV+TG+V DG G V GAFVRLLDS+ EFTAEVVAS TGD
Sbjct 1 MCAAPKQGQKLPAGVDVEKETVLTGQVTDGSGNPVAGAFVRLLDSTGEFTAEVVASPTGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
FRFFAAPG+WTLRALS+ GNG+ + P G G+HE D+ ++
Sbjct 61 FRFFAAPGTWTLRALSSVGNGEKTINPDGPGVHEHDITVS 100
>gi|111021826|ref|YP_704798.1| hypothetical protein RHA1_ro04855 [Rhodococcus jostii RHA1]
gi|110821356|gb|ABG96640.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=101
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/99 (71%), Positives = 79/99 (80%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC P Q TLPA VD+EKETVITGRV+ DGQ +GGAFVRLLD EFTAEVVAS TGD
Sbjct 1 MCGAPVQTQTLPAGVDVEKETVITGRVLAADGQPIGGAFVRLLDGGGEFTAEVVASGTGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPG WT+RALS++GNG + V PS AG+H VDV +
Sbjct 61 FRFFAAPGEWTVRALSSSGNGTSTVSPSSAGVHNVDVTV 99
>gi|312138318|ref|YP_004005654.1| hypothetical protein REQ_08550 [Rhodococcus equi 103S]
gi|325674765|ref|ZP_08154452.1| sulfur metabolism protein SseC [Rhodococcus equi ATCC 33707]
gi|311887657|emb|CBH46969.1| conserved hypothetical protein [Rhodococcus equi 103S]
gi|325554351|gb|EGD24026.1| sulfur metabolism protein SseC [Rhodococcus equi ATCC 33707]
Length=101
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/99 (70%), Positives = 80/99 (81%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC P Q TLPA V++EKETVITGRV+ DGQ VGGAFVRLLD +DEFTAEVVASATGD
Sbjct 1 MCGAPVQTQTLPAGVNVEKETVITGRVLAADGQPVGGAFVRLLDGTDEFTAEVVASATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPG+W +RALS+ GNGD + P AG++ VDV +
Sbjct 61 FRFFAAPGTWKVRALSSTGNGDVTITPDSAGVYAVDVTV 99
>gi|226364347|ref|YP_002782129.1| hypothetical protein ROP_49370 [Rhodococcus opacus B4]
gi|226242836|dbj|BAH53184.1| hypothetical protein [Rhodococcus opacus B4]
Length=101
Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/99 (71%), Positives = 79/99 (80%), Gaps = 0/99 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC P Q TLPA VD+EKETVITGRV+ DGQ +GGAFVRLLD EFTAEVVAS TGD
Sbjct 1 MCGAPVQTQTLPAGVDVEKETVITGRVLATDGQPIGGAFVRLLDGGGEFTAEVVASGTGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPG WT+RALS++GNG A V P+ AG+H VDV +
Sbjct 61 FRFFAAPGDWTVRALSSSGNGTATVSPTSAGVHNVDVTV 99
>gi|333918414|ref|YP_004491995.1| SseC protein [Amycolicicoccus subflavus DQS3-9A1]
gi|333480635|gb|AEF39195.1| SseC protein [Amycolicicoccus subflavus DQS3-9A1]
Length=101
Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 81/100 (81%), Gaps = 0/100 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC P QG LPA VD EKETVITG+VV G+ +GGAFVRLLDS+ EFTAEVVAS +GD
Sbjct 1 MCGAPVQGQNLPAGVDAEKETVITGKVVGAAGEPIGGAFVRLLDSTGEFTAEVVASGSGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
FRFFAAPG+WT+RALSA+GNG+A V P AG+HEV + ++
Sbjct 61 FRFFAAPGTWTVRALSASGNGEASVSPESAGVHEVSITVS 100
>gi|317509399|ref|ZP_07967018.1| hypothetical protein HMPREF9336_03390 [Segniliparus rugosus ATCC
BAA-974]
gi|316252322|gb|EFV11773.1| hypothetical protein HMPREF9336_03390 [Segniliparus rugosus ATCC
BAA-974]
Length=101
Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 81/100 (81%), Gaps = 0/100 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC+ P+QG TLPASV+LEKETV++GRV+ DG V GAFVRLLD++DEFTAEVV SATGD
Sbjct 1 MCAAPRQGQTLPASVNLEKETVLSGRVLGSDGSPVAGAFVRLLDATDEFTAEVVTSATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
+RFFAAPG WTLRA+S G V+P+ AGIHE D+ ++
Sbjct 61 YRFFAAPGIWTLRAISRNGTATLEVRPATAGIHENDLTVS 100
>gi|296141223|ref|YP_003648466.1| hypothetical protein Tpau_3548 [Tsukamurella paurometabola DSM
20162]
gi|296029357|gb|ADG80127.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=101
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 78/100 (78%), Gaps = 0/100 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC PKQG LPA VD+EKETV+TG+V+DG G V GAFVRLLD + EFTAEVVAS TGD
Sbjct 1 MCGAPKQGQNLPAGVDVEKETVLTGQVLDGTGNPVAGAFVRLLDGTGEFTAEVVASGTGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
+RFFAAPG+WTLRALS+ GNGD V P G++ D+ ++
Sbjct 61 YRFFAAPGTWTLRALSSVGNGDIQVTPESNGVYNQDITVS 100
>gi|296395424|ref|YP_003660308.1| hypothetical protein Srot_3053 [Segniliparus rotundus DSM 44985]
gi|296182571|gb|ADG99477.1| protein of unknown function DUF1416 [Segniliparus rotundus DSM
44985]
Length=101
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/94 (70%), Positives = 76/94 (81%), Gaps = 0/94 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC+ P+QG TLP SV+LEKETV+TGRV+D +G V GAFVRLLD +DEFTAEVV SATGD
Sbjct 1 MCAAPRQGQTLPVSVNLEKETVLTGRVLDAEGSPVPGAFVRLLDGADEFTAEVVTSATGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHE 94
+RFFAAPG WTLRA+S G V+P GAG+HE
Sbjct 61 YRFFAAPGVWTLRAISRRGTATVEVRPEGAGVHE 94
>gi|324999024|ref|ZP_08120136.1| hypothetical protein PseP1_09682 [Pseudonocardia sp. P1]
Length=99
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/99 (65%), Positives = 78/99 (79%), Gaps = 1/99 (1%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC P Q LTLPA DLEKETV+ GRVV G G+ VGGAFVRLLD + EFTAEVV+SA+GD
Sbjct 1 MCGAPDQSLTLPAGTDLEKETVLAGRVVAG-GEPVGGAFVRLLDGTGEFTAEVVSSASGD 59
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPGSWT+RALS +GNG + + G G+H+ ++ +
Sbjct 60 FRFFAAPGSWTVRALSRSGNGQSALVADGPGLHQAEIAV 98
>gi|226362415|ref|YP_002780193.1| hypothetical protein ROP_30010 [Rhodococcus opacus B4]
gi|226240900|dbj|BAH51248.1| hypothetical protein [Rhodococcus opacus B4]
Length=101
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 75/100 (75%), Gaps = 0/100 (0%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
M + P T+PA VDL++ET I+G+VV GDGQ VGGAFVRLLD + FTAE+VAS GD
Sbjct 1 MSAAPTHTHTIPAGVDLDRETAISGKVVTGDGQPVGGAFVRLLDGTGTFTAEIVASGAGD 60
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT 100
FRFF APG WT+RALS G G A V+P+ +GIH VD+ +T
Sbjct 61 FRFFVAPGDWTVRALSPIGTGAASVKPTTSGIHTVDITLT 100
>gi|331694336|ref|YP_004330575.1| hypothetical protein Psed_0454 [Pseudonocardia dioxanivorans
CB1190]
gi|326949025|gb|AEA22722.1| protein of unknown function DUF1416 [Pseudonocardia dioxanivorans
CB1190]
Length=99
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/99 (62%), Positives = 77/99 (78%), Gaps = 1/99 (1%)
Query 1 MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD 60
MC P Q ++LP DL K+TV+ GRVV G G VGGAFVRLLD + EFTAEVV+SA+GD
Sbjct 1 MCGAPDQAVSLPVGTDLGKQTVLAGRVVAG-GAPVGGAFVRLLDGTGEFTAEVVSSASGD 59
Query 61 FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
FRFFAAPG+WT+RALS +GNG+AV+ G G+H+ +V +
Sbjct 60 FRFFAAPGTWTVRALSRSGNGEAVLNAEGPGLHQTEVAV 98
>gi|238061318|ref|ZP_04606027.1| hypothetical protein MCAG_02284 [Micromonospora sp. ATCC 39149]
gi|237883129|gb|EEP71957.1| hypothetical protein MCAG_02284 [Micromonospora sp. ATCC 39149]
Length=107
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/98 (65%), Positives = 73/98 (75%), Gaps = 1/98 (1%)
Query 2 CSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDF 61
C+ P Q LPAS+DLEKETVITG V G+AV GA+VRLLDS+ EFTAEVV S G F
Sbjct 9 CAAPDQAAPLPASLDLEKETVITGAVTSEAGEAVPGAYVRLLDSTGEFTAEVVTSPAGQF 68
Query 62 RFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
RFFAAPG+WTLRALS GNGD+ V + GI+EV V +
Sbjct 69 RFFAAPGTWTLRALSRHGNGDSTVT-AARGINEVTVTV 105
>gi|330470367|ref|YP_004408110.1| hypothetical protein VAB18032_02130 [Verrucosispora maris AB-18-032]
gi|328813338|gb|AEB47510.1| hypothetical protein VAB18032_02130 [Verrucosispora maris AB-18-032]
Length=107
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/98 (66%), Positives = 72/98 (74%), Gaps = 1/98 (1%)
Query 2 CSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDF 61
C+ P Q LPAS+DLEKETVITG V G+AV GA+VRLLDS+ EFTAEVV S G F
Sbjct 9 CAAPDQAAPLPASIDLEKETVITGVVHSAQGEAVPGAYVRLLDSTGEFTAEVVTSPVGQF 68
Query 62 RFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
RFFAAPG+WTLRALS GNGD V +G GI EV V +
Sbjct 69 RFFAAPGNWTLRALSRHGNGDIAVT-AGRGITEVTVTV 105
>gi|145592863|ref|YP_001157160.1| hypothetical protein Strop_0297 [Salinispora tropica CNB-440]
gi|145302200|gb|ABP52782.1| protein of unknown function DUF1416 [Salinispora tropica CNB-440]
Length=108
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/98 (65%), Positives = 72/98 (74%), Gaps = 1/98 (1%)
Query 2 CSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDF 61
C+ P Q LPAS+DLEKETVITG V D G+ V GA+VRLLDS+DEFTAEVV S G F
Sbjct 9 CAAPDQAAPLPASLDLEKETVITGVVHDAAGEPVTGAYVRLLDSADEFTAEVVTSPAGQF 68
Query 62 RFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKI 99
RFFAAPG+W LRALS GNGD V+ S GI+E V +
Sbjct 69 RFFAAPGTWRLRALSRHGNGDTVITAS-RGINEAAVTV 105
Lambda K H
0.315 0.133 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129239199826
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40