BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3122

Length=156
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|254233746|ref|ZP_04927071.1|  hypothetical protein TBCG_03059 ...   322    1e-86
gi|15610259|ref|NP_217638.1|  hypothetical protein Rv3122 [Mycoba...   321    3e-86
gi|31794297|ref|NP_856790.1|  hypothetical protein Mb3145 [Mycoba...   319    7e-86
gi|167970213|ref|ZP_02552490.1|  hypothetical protein MtubH3_2018...   288    2e-76
gi|289575834|ref|ZP_06456061.1|  conserved hypothetical protein [...   287    5e-76
gi|339633129|ref|YP_004724771.1|  hypothetical protein MAF_31290 ...   205    1e-51
gi|308271934|emb|CBX28542.1|  hypothetical protein N47_G38660 [un...   112    1e-23
gi|186474617|ref|YP_001863588.1|  hypothetical protein Bphy_7610 ...  66.2    1e-09
gi|255595127|ref|XP_002536233.1|  conserved hypothetical protein ...  60.5    8e-08
gi|308272218|emb|CBX28824.1|  unknown protein [uncultured Desulfo...  56.2    2e-06
gi|258652785|ref|YP_003201941.1|  hypothetical protein Namu_2600 ...  49.7    2e-04
gi|218289478|ref|ZP_03493706.1|  hypothetical protein AaLAA1DRAFT...  45.1    0.004
gi|257793012|ref|YP_003186411.1|  hypothetical protein Aaci_3019 ...  42.7    0.018
gi|340959603|gb|EGS20784.1|  helicase-like protein [Chaetomium th...  35.8    2.4  
gi|156100605|ref|XP_001616030.1|  erythrocyte membrane protein 3 ...  34.3    7.0  
gi|301101531|ref|XP_002899854.1|  conserved hypothetical protein ...  34.3    7.1  


>gi|254233746|ref|ZP_04927071.1| hypothetical protein TBCG_03059 [Mycobacterium tuberculosis C]
 gi|124599275|gb|EAY58379.1| hypothetical protein TBCG_03059 [Mycobacterium tuberculosis C]
Length=161

 Score =  322 bits (825),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 156/156 (100%), Positives = 156/156 (100%), Gaps = 0/156 (0%)

Query  1    VYSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC  60
            VYSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC
Sbjct  6    VYSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC  65

Query  61   AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAI  120
            AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAI
Sbjct  66   AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAI  125

Query  121  CEARPPNPAATAPPAGTTGHKKGGSATRSRRSSPPR  156
            CEARPPNPAATAPPAGTTGHKKGGSATRSRRSSPPR
Sbjct  126  CEARPPNPAATAPPAGTTGHKKGGSATRSRRSSPPR  161


>gi|15610259|ref|NP_217638.1| hypothetical protein Rv3122 [Mycobacterium tuberculosis H37Rv]
 gi|15842694|ref|NP_337731.1| hypothetical protein MT3205 [Mycobacterium tuberculosis CDC1551]
 gi|148662976|ref|YP_001284499.1| hypothetical protein MRA_3154 [Mycobacterium tuberculosis H37Ra]
 32 more sequence titles
 
gi|148824315|ref|YP_001289069.1| hypothetical protein TBFG_13142 [Mycobacterium tuberculosis F11]
 gi|253800154|ref|YP_003033155.1| hypothetical protein TBMG_03166 [Mycobacterium tuberculosis KZN 
1435]
 gi|254365750|ref|ZP_04981795.1| hypothetical protein TBHG_03053 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289444686|ref|ZP_06434430.1| hypothetical protein TBLG_03743 [Mycobacterium tuberculosis T46]
 gi|289448801|ref|ZP_06438545.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289555396|ref|ZP_06444606.1| hypothetical protein TBXG_03146 [Mycobacterium tuberculosis KZN 
605]
 gi|289571331|ref|ZP_06451558.1| hypothetical protein TBJG_01862 [Mycobacterium tuberculosis T17]
 gi|289746932|ref|ZP_06506310.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751798|ref|ZP_06511176.1| hypothetical protein TBDG_02327 [Mycobacterium tuberculosis T92]
 gi|289755242|ref|ZP_06514620.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289759250|ref|ZP_06518628.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763305|ref|ZP_06522683.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|298526595|ref|ZP_07014004.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|2094816|emb|CAB08379.1| HYPOTHETICAL PROTEIN Rv3122 [Mycobacterium tuberculosis H37Rv]
 gi|13883014|gb|AAK47545.1| hypothetical protein MT3205 [Mycobacterium tuberculosis CDC1551]
 gi|134151263|gb|EBA43308.1| hypothetical protein TBHG_03053 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148507128|gb|ABQ74937.1| hypothetical protein MRA_3154 [Mycobacterium tuberculosis H37Ra]
 gi|148722842|gb|ABR07467.1| hypothetical protein TBFG_13142 [Mycobacterium tuberculosis F11]
 gi|253321657|gb|ACT26260.1| hypothetical protein TBMG_03166 [Mycobacterium tuberculosis KZN 
1435]
 gi|289417605|gb|EFD14845.1| hypothetical protein TBLG_03743 [Mycobacterium tuberculosis T46]
 gi|289421759|gb|EFD18960.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289440028|gb|EFD22521.1| hypothetical protein TBXG_03146 [Mycobacterium tuberculosis KZN 
605]
 gi|289545085|gb|EFD48733.1| hypothetical protein TBJG_01862 [Mycobacterium tuberculosis T17]
 gi|289687460|gb|EFD54948.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289692385|gb|EFD59814.1| hypothetical protein TBDG_02327 [Mycobacterium tuberculosis T92]
 gi|289695829|gb|EFD63258.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710811|gb|EFD74827.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289714814|gb|EFD78826.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496389|gb|EFI31683.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|326902655|gb|EGE49588.1| hypothetical protein TBPG_00504 [Mycobacterium tuberculosis W-148]
 gi|328459892|gb|AEB05315.1| hypothetical protein TBSG_03186 [Mycobacterium tuberculosis KZN 
4207]
 gi|344220956|gb|AEN01587.1| hypothetical protein MTCTRI2_3186 [Mycobacterium tuberculosis 
CTRI-2]
Length=156

 Score =  321 bits (822),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 155/156 (99%), Positives = 156/156 (100%), Gaps = 0/156 (0%)

Query  1    VYSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC  60
            +YSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC
Sbjct  1    MYSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC  60

Query  61   AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAI  120
            AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAI
Sbjct  61   AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAI  120

Query  121  CEARPPNPAATAPPAGTTGHKKGGSATRSRRSSPPR  156
            CEARPPNPAATAPPAGTTGHKKGGSATRSRRSSPPR
Sbjct  121  CEARPPNPAATAPPAGTTGHKKGGSATRSRRSSPPR  156


>gi|31794297|ref|NP_856790.1| hypothetical protein Mb3145 [Mycobacterium bovis AF2122/97]
 gi|121639003|ref|YP_979227.1| hypothetical protein BCG_3143 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224991495|ref|YP_002646184.1| hypothetical protein JTY_3138 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|31619892|emb|CAD96832.1| HYPOTHETICAL PROTEIN Mb3145 [Mycobacterium bovis AF2122/97]
 gi|121494651|emb|CAL73132.1| Hypothetical protein BCG_3143 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224774610|dbj|BAH27416.1| hypothetical protein JTY_3138 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341603042|emb|CCC65720.1| hypothetical protein BCGM_3127 [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=156

 Score =  319 bits (818),  Expect = 7e-86, Method: Compositional matrix adjust.
 Identities = 154/155 (99%), Positives = 155/155 (100%), Gaps = 0/155 (0%)

Query  1    VYSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC  60
            +YSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC
Sbjct  1    MYSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC  60

Query  61   AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAI  120
            AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAI
Sbjct  61   AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAI  120

Query  121  CEARPPNPAATAPPAGTTGHKKGGSATRSRRSSPP  155
            CEARPPNPAATAPPAGTTGHKKGGSATRSRRSSPP
Sbjct  121  CEARPPNPAATAPPAGTTGHKKGGSATRSRRSSPP  155


>gi|167970213|ref|ZP_02552490.1| hypothetical protein MtubH3_20183 [Mycobacterium tuberculosis 
H37Ra]
 gi|254552206|ref|ZP_05142653.1| hypothetical protein Mtube_17423 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|294995484|ref|ZP_06801175.1| hypothetical protein Mtub2_13472 [Mycobacterium tuberculosis 
210]
 30 more sequence titles
 
gi|297635761|ref|ZP_06953541.1| hypothetical protein MtubK4_16637 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297732759|ref|ZP_06961877.1| hypothetical protein MtubKR_16797 [Mycobacterium tuberculosis 
KZN R506]
 gi|306777436|ref|ZP_07415773.1| hypothetical protein TMAG_03584 [Mycobacterium tuberculosis SUMu001]
 gi|306782156|ref|ZP_07420493.1| hypothetical protein TMBG_01812 [Mycobacterium tuberculosis SUMu002]
 gi|306785980|ref|ZP_07424302.1| hypothetical protein TMCG_01539 [Mycobacterium tuberculosis SUMu003]
 gi|306787838|ref|ZP_07426160.1| hypothetical protein TMDG_03955 [Mycobacterium tuberculosis SUMu004]
 gi|306794869|ref|ZP_07433171.1| hypothetical protein TMEG_03512 [Mycobacterium tuberculosis SUMu005]
 gi|306799070|ref|ZP_07437372.1| hypothetical protein TMFG_00326 [Mycobacterium tuberculosis SUMu006]
 gi|306804914|ref|ZP_07441582.1| hypothetical protein TMHG_02334 [Mycobacterium tuberculosis SUMu008]
 gi|306809104|ref|ZP_07445772.1| hypothetical protein TMGG_02664 [Mycobacterium tuberculosis SUMu007]
 gi|306969207|ref|ZP_07481868.1| hypothetical protein TMIG_02632 [Mycobacterium tuberculosis SUMu009]
 gi|306973554|ref|ZP_07486215.1| hypothetical protein TMJG_03299 [Mycobacterium tuberculosis SUMu010]
 gi|307081263|ref|ZP_07490433.1| hypothetical protein TMKG_02373 [Mycobacterium tuberculosis SUMu011]
 gi|307085864|ref|ZP_07494977.1| hypothetical protein TMLG_03470 [Mycobacterium tuberculosis SUMu012]
 gi|313660092|ref|ZP_07816972.1| hypothetical protein MtubKV_16802 [Mycobacterium tuberculosis 
KZN V2475]
 gi|308214152|gb|EFO73551.1| hypothetical protein TMAG_03584 [Mycobacterium tuberculosis SUMu001]
 gi|308325153|gb|EFP14004.1| hypothetical protein TMBG_01812 [Mycobacterium tuberculosis SUMu002]
 gi|308329384|gb|EFP18235.1| hypothetical protein TMCG_01539 [Mycobacterium tuberculosis SUMu003]
 gi|308335522|gb|EFP24373.1| hypothetical protein TMDG_03955 [Mycobacterium tuberculosis SUMu004]
 gi|308336848|gb|EFP25699.1| hypothetical protein TMEG_03512 [Mycobacterium tuberculosis SUMu005]
 gi|308340706|gb|EFP29557.1| hypothetical protein TMFG_00326 [Mycobacterium tuberculosis SUMu006]
 gi|308344442|gb|EFP33293.1| hypothetical protein TMGG_02664 [Mycobacterium tuberculosis SUMu007]
 gi|308348518|gb|EFP37369.1| hypothetical protein TMHG_02334 [Mycobacterium tuberculosis SUMu008]
 gi|308353068|gb|EFP41919.1| hypothetical protein TMIG_02632 [Mycobacterium tuberculosis SUMu009]
 gi|308357042|gb|EFP45893.1| hypothetical protein TMJG_03299 [Mycobacterium tuberculosis SUMu010]
 gi|308360997|gb|EFP49848.1| hypothetical protein TMKG_02373 [Mycobacterium tuberculosis SUMu011]
 gi|308364604|gb|EFP53455.1| hypothetical protein TMLG_03470 [Mycobacterium tuberculosis SUMu012]
 gi|323718209|gb|EGB27389.1| hypothetical protein TMMG_02256 [Mycobacterium tuberculosis CDC1551A]
 gi|339295954|gb|AEJ48065.1| hypothetical protein CCDC5079_2875 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299564|gb|AEJ51674.1| hypothetical protein CCDC5180_2837 [Mycobacterium tuberculosis 
CCDC5180]
Length=141

 Score =  288 bits (737),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 140/141 (99%), Positives = 141/141 (100%), Gaps = 0/141 (0%)

Query  16   VGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVCAQEGHPGHGPRYLWT  75
            +GEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVCAQEGHPGHGPRYLWT
Sbjct  1    MGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVCAQEGHPGHGPRYLWT  60

Query  76   RTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAICEARPPNPAATAPPA  135
            RTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAICEARPPNPAATAPPA
Sbjct  61   RTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAICEARPPNPAATAPPA  120

Query  136  GTTGHKKGGSATRSRRSSPPR  156
            GTTGHKKGGSATRSRRSSPPR
Sbjct  121  GTTGHKKGGSATRSRRSSPPR  141


>gi|289575834|ref|ZP_06456061.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289540265|gb|EFD44843.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=141

 Score =  287 bits (734),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 139/140 (99%), Positives = 140/140 (100%), Gaps = 0/140 (0%)

Query  16   VGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVCAQEGHPGHGPRYLWT  75
            +GEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVCAQEGHPGHGPRYLWT
Sbjct  1    MGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVCAQEGHPGHGPRYLWT  60

Query  76   RTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAICEARPPNPAATAPPA  135
            RTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAICEARPPNPAATAPPA
Sbjct  61   RTVAGRGTKGRQLSVEEVDKVRAELANYHRFAQVSEQIVAVNEAICEARPPNPAATAPPA  120

Query  136  GTTGHKKGGSATRSRRSSPP  155
            GTTGHKKGGSATRSRRSSPP
Sbjct  121  GTTGHKKGGSATRSRRSSPP  140


>gi|339633129|ref|YP_004724771.1| hypothetical protein MAF_31290 [Mycobacterium africanum GM041182]
 gi|339332485|emb|CCC28199.1| hypothetical protein MAF_31290 [Mycobacterium africanum GM041182]
Length=156

 Score =  205 bits (522),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 97/98 (99%), Positives = 98/98 (100%), Gaps = 0/98 (0%)

Query  1   VYSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC  60
           +YSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC
Sbjct  1   MYSGCWINNQNGETRVGEDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVC  60

Query  61  AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRA  98
           AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRA
Sbjct  61  AQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEVDKVRA  98


>gi|308271934|emb|CBX28542.1| hypothetical protein N47_G38660 [uncultured Desulfobacterium 
sp.]
 gi|308271952|emb|CBX28560.1| hypothetical protein N47_G38840 [uncultured Desulfobacterium 
sp.]
 gi|308272635|emb|CBX29239.1| hypothetical protein N47_J02200 [uncultured Desulfobacterium 
sp.]
 gi|308273746|emb|CBX30348.1| hypothetical protein N47_D31570 [uncultured Desulfobacterium 
sp.]
 gi|308275192|emb|CBX31789.1| hypothetical protein N47_N26140 [uncultured Desulfobacterium 
sp.]
Length=128

 Score =  112 bits (281),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 51/98 (53%), Positives = 65/98 (67%), Gaps = 0/98 (0%)

Query  28   RARLYDQLAATGDFRRGSISENYRRCGKPNCVCAQEGHPGHGPRYLWTRTVAGRGTKGRQ  87
            R  LY QL  TGDFRRG IS  YR+CGK NC CA+EGHPGHGP++LW  T+ G+      
Sbjct  3    REHLYRQLQETGDFRRGIISVVYRKCGKKNCACAKEGHPGHGPQHLWNTTIKGKSYAKSV  62

Query  88   LSVEEVDKVRAELANYHRFAQVSEQIVAVNEAICEARP  125
                E+ K   E+AN+ R+ ++ E+IV VNE IC+ RP
Sbjct  63   KLGPELQKYLEEIANHQRYVKLCEEIVLVNERICDLRP  100


>gi|186474617|ref|YP_001863588.1| hypothetical protein Bphy_7610 [Burkholderia phymatum STM815]
 gi|184198576|gb|ACC76538.1| conserved hypothetical protein [Burkholderia phymatum STM815]
Length=110

 Score = 66.2 bits (160),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 35/82 (43%), Positives = 46/82 (57%), Gaps = 2/82 (2%)

Query  24   LEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVCAQEGHPGHGPRYLWTRTVAGRGT  83
            L +RRA+L  Q+ A     RGS+ E Y+RCGKP C CA    PGHGP+Y  + +  GR  
Sbjct  9    LRRRRAQLLKQMPALETLLRGSLIERYKRCGKPGCKCADG--PGHGPKYYLSVSFPGRRP  66

Query  84   KGRQLSVEEVDKVRAELANYHR  105
            +   +   +   V   LANYHR
Sbjct  67   QMDYVPQADYTDVAEHLANYHR  88


>gi|255595127|ref|XP_002536233.1| conserved hypothetical protein [Ricinus communis]
 gi|223520361|gb|EEF26150.1| conserved hypothetical protein [Ricinus communis]
Length=110

 Score = 60.5 bits (145),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 36/89 (41%), Positives = 47/89 (53%), Gaps = 3/89 (3%)

Query  18   EDSLED-LEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVCAQEGHPGHGPRYLWTR  76
            ED L   L +RRA L  Q+ A     RGS+ E Y+RCGKP C CA    PGHGP+Y  + 
Sbjct  2    EDILSSTLRKRRAELLRQMPALDTLLRGSLIERYKRCGKPGCKCAD--GPGHGPKYYLSV  59

Query  77   TVAGRGTKGRQLSVEEVDKVRAELANYHR  105
            +  GR  +   +   +   V   L +YHR
Sbjct  60   SFPGRRPQMDYVPQADHADVVERLESYHR  88


>gi|308272218|emb|CBX28824.1| unknown protein [uncultured Desulfobacterium sp.]
Length=70

 Score = 56.2 bits (134),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/67 (44%), Positives = 37/67 (56%), Gaps = 0/67 (0%)

Query  18  EDSLEDLEQRRARLYDQLAATGDFRRGSISENYRRCGKPNCVCAQEGHPGHGPRYLWTRT  77
           E+++E LE  R  LY QL  TGDFRRG IS  YR+CGK      + G  G G     T+ 
Sbjct  2   EETIESLEIEREHLYRQLQETGDFRRGIISVVYRKCGKKTAHVLKRGIQGMGRNIYGTQQ  61

Query  78  VAGRGTK  84
             G+ T+
Sbjct  62  SKGKATR  68


>gi|258652785|ref|YP_003201941.1| hypothetical protein Namu_2600 [Nakamurella multipartita DSM 
44233]
 gi|258652834|ref|YP_003201990.1| hypothetical protein Namu_2654 [Nakamurella multipartita DSM 
44233]
 gi|258556010|gb|ACV78952.1| hypothetical protein Namu_2600 [Nakamurella multipartita DSM 
44233]
 gi|258556059|gb|ACV79001.1| hypothetical protein Namu_2654 [Nakamurella multipartita DSM 
44233]
Length=112

 Score = 49.7 bits (117),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 28/92 (31%), Positives = 47/92 (52%), Gaps = 1/92 (1%)

Query  34   QLAATGDFRRGSISENYRRCGKPNCVCAQEGHPGHGPRYLWTRTVAGRGTKGRQLSVEEV  93
            QLAA G    GS++    RCGKP+C C  +    H P + WTR +AGR T  R+L+ +++
Sbjct  17   QLAALGFVLPGSVTHRQARCGKPSCRCHADPPVLHPPFWSWTRKLAGR-TVTRRLTEDQL  75

Query  94   DKVRAELANYHRFAQVSEQIVAVNEAICEARP  125
               +    N  R   +  ++  ++  + +  P
Sbjct  76   RDYQPWFDNSRRLRALVTELEDLSLRVLDQDP  107


>gi|218289478|ref|ZP_03493706.1| hypothetical protein AaLAA1DRAFT_1292 [Alicyclobacillus acidocaldarius 
LAA1]
 gi|218240346|gb|EED07528.1| hypothetical protein AaLAA1DRAFT_1292 [Alicyclobacillus acidocaldarius 
LAA1]
Length=300

 Score = 45.1 bits (105),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (50%), Gaps = 23/110 (20%)

Query  45   SISENYRRCGKPNCVCAQEGHPGHGPRYLWTRTVAGRG---------------TKGRQLS  89
            SI+  YR+CGKP C   +EG PGHGP +  ++TV GR                T+ +   
Sbjct  9    SIAAQYRKCGKPTCRVCREG-PGHGPYWYGSKTVDGRRISKYFGKTPPMAQEITQDKPSV  67

Query  90   VEEVDKVRAELANYH-RFAQVSEQIVAVNEAICEARPPNPAATAPPAGTT  138
            ++E+ ++R E A+   + AQ+  ++ A+        PP P+ +  P   T
Sbjct  68   LQELAQLREENASLRAQVAQLQAELAALRT------PPAPSNSPHPLEET  111


>gi|257793012|ref|YP_003186411.1| hypothetical protein Aaci_3019 [Alicyclobacillus acidocaldarius 
subsp. acidocaldarius DSM 446]
 gi|257479704|gb|ACV60022.1| hypothetical protein Aaci_3019 [Alicyclobacillus acidocaldarius 
subsp. acidocaldarius DSM 446]
Length=300

 Score = 42.7 bits (99),  Expect = 0.018, Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query  45   SISENYRRCGKPNCVCAQEGHPGHGPRYLWTRTVAGRGTK---GRQLSVE----------  91
            SI+  YRRCGK  C   +EG PGHGP +  ++TV GR      G+   VE          
Sbjct  9    SIAAQYRRCGKSACRVCREG-PGHGPYWYGSKTVDGRRLTKYFGKVPPVEQEIAQDEPSV  67

Query  92   --EVDKVRAELANYH-RFAQVSEQIVAVNEAICEARPPNP  128
              E+ ++R E  N   + AQ+  ++ A+      + PP+P
Sbjct  68   LKELSRLREENENLRAQVAQLQAELAALRTPPALSDPPHP  107


>gi|340959603|gb|EGS20784.1| helicase-like protein [Chaetomium thermophilum var. thermophilum 
DSM 1495]
Length=1886

 Score = 35.8 bits (81),  Expect = 2.4, Method: Composition-based stats.
 Identities = 17/31 (55%), Positives = 18/31 (59%), Gaps = 0/31 (0%)

Query  125  PPNPAATAPPAGTTGHKKGGSATRSRRSSPP  155
            P NPA    P+G T    G S T SRRSSPP
Sbjct  674  PMNPALFQKPSGGTYSLPGASQTNSRRSSPP  704


>gi|156100605|ref|XP_001616030.1| erythrocyte membrane protein 3 [Plasmodium vivax SaI-1]
 gi|148804904|gb|EDL46303.1| erythrocyte membrane protein 3, putative [Plasmodium vivax]
Length=1034

 Score = 34.3 bits (77),  Expect = 7.0, Method: Composition-based stats.
 Identities = 16/34 (48%), Positives = 20/34 (59%), Gaps = 0/34 (0%)

Query  122  EARPPNPAATAPPAGTTGHKKGGSATRSRRSSPP  155
            E  P NP   +PP+G   + K  SAT S +SSPP
Sbjct  105  EGMPDNPLTKSPPSGLKANIKDQSATHSLKSSPP  138


>gi|301101531|ref|XP_002899854.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262102856|gb|EEY60908.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length=543

 Score = 34.3 bits (77),  Expect = 7.1, Method: Compositional matrix adjust.
 Identities = 25/63 (40%), Positives = 34/63 (54%), Gaps = 6/63 (9%)

Query  88   LSVEEVDKVRAELANYHRFAQVSEQIVAVNEAICEARPPNPAATAPPAGTTGHKKGGSAT  147
            LS E VD++ AEL+ +  +  V E  +A+   +    PP  +ATA   G  G   GGSAT
Sbjct  208  LSPEFVDRLAAELSRWQFWVDVREMYIAL---LSRQHPPG-SATATEGGPIG--TGGSAT  261

Query  148  RSR  150
             SR
Sbjct  262  NSR  264



Lambda     K      H
   0.315    0.131    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 130065254832


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40