BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3125c
Length=391
Score E
Sequences producing significant alignments: (Bits) Value
gi|15842698|ref|NP_337735.1| PPE family protein [Mycobacterium t... 743 0.0
gi|31794300|ref|NP_856793.1| PPE family protein [Mycobacterium b... 741 0.0
gi|306777439|ref|ZP_07415776.1| PPE family protein [Mycobacteriu... 739 0.0
gi|308370157|ref|ZP_07666873.1| putative PPE family protein [Myc... 590 2e-166
gi|121639007|ref|YP_979231.1| PPE family protein [Mycobacterium ... 514 1e-143
gi|306799075|ref|ZP_07437377.1| putative PPE family protein [Myc... 401 1e-109
gi|183984295|ref|YP_001852586.1| PPE family protein, PPE49 [Myco... 351 2e-94
gi|308374780|ref|ZP_07437376.2| hypothetical protein TMFG_00329 ... 319 7e-85
gi|240170236|ref|ZP_04748895.1| PPE family protein, PPE49 [Mycob... 316 6e-84
gi|183983644|ref|YP_001851935.1| PPE family protein [Mycobacteri... 297 2e-78
gi|340627363|ref|YP_004745815.1| PPE family protein [Mycobacteri... 295 1e-77
gi|289575045|ref|ZP_06455272.1| PPE family protein [Mycobacteriu... 294 2e-77
gi|15841861|ref|NP_336898.1| PPE family protein [Mycobacterium t... 293 3e-77
gi|167969910|ref|ZP_02552187.1| PPE family protein [Mycobacteriu... 293 3e-77
gi|183983641|ref|YP_001851932.1| PPE family protein [Mycobacteri... 292 7e-77
gi|297634951|ref|ZP_06952731.1| PPE family protein [Mycobacteriu... 289 4e-76
gi|15841864|ref|NP_336901.1| PPE family protein [Mycobacterium t... 287 3e-75
gi|240170238|ref|ZP_04748897.1| PPE family protein [Mycobacteriu... 284 2e-74
gi|326903969|gb|EGE50902.1| LOW QUALITY PROTEIN: PPE family prot... 261 1e-67
gi|289745622|ref|ZP_06505000.1| PPE family protein [Mycobacteriu... 261 1e-67
gi|339298873|gb|AEJ50983.1| PPE family protein [Mycobacterium tu... 253 3e-65
gi|294994545|ref|ZP_06800236.1| PPE family protein [Mycobacteriu... 247 2e-63
gi|289762519|ref|ZP_06521897.1| ppe family protein [Mycobacteriu... 244 2e-62
gi|254551401|ref|ZP_05141848.1| PPE family protein [Mycobacteriu... 242 7e-62
gi|342857484|ref|ZP_08714140.1| hypothetical protein MCOL_01370 ... 215 1e-53
gi|342859619|ref|ZP_08716272.1| PPE family protein [Mycobacteriu... 200 4e-49
gi|254774763|ref|ZP_05216279.1| hypothetical protein MaviaA2_088... 192 1e-46
gi|41408234|ref|NP_961070.1| hypothetical protein MAP2136c [Myco... 189 9e-46
gi|296166320|ref|ZP_06848757.1| PPE13 protein [Mycobacterium par... 186 5e-45
gi|240169037|ref|ZP_04747696.1| PPE family protein [Mycobacteriu... 183 4e-44
gi|308370986|ref|ZP_07423462.2| putative PPE family protein [Myc... 177 2e-42
gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacteri... 176 6e-42
gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacteri... 176 8e-42
gi|183983558|ref|YP_001851849.1| PPE family protein [Mycobacteri... 175 1e-41
gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacteriu... 173 5e-41
gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacteriu... 172 1e-40
gi|308372058|ref|ZP_07427232.2| putative PPE family protein [Myc... 172 1e-40
gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacteriu... 172 1e-40
gi|307084423|ref|ZP_07493536.1| putative PPE family protein [Myc... 171 2e-40
gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium b... 171 2e-40
gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium t... 171 2e-40
gi|240171832|ref|ZP_04750491.1| PPE family protein [Mycobacteriu... 167 3e-39
gi|118466099|ref|YP_881935.1| PPE family protein [Mycobacterium ... 167 3e-39
gi|212595976|gb|ACJ35541.1| PPE16 [Mycobacterium avium subsp. av... 167 3e-39
gi|344221312|gb|AEN01943.1| PE family protein [Mycobacterium tub... 167 4e-39
gi|336457435|gb|EGO36444.1| PPE-repeat containing protein [Mycob... 166 4e-39
gi|240169713|ref|ZP_04748372.1| PPE family protein [Mycobacteriu... 165 1e-38
gi|240171260|ref|ZP_04749919.1| PPE family protein [Mycobacteriu... 159 6e-37
gi|118464876|ref|YP_882114.1| PPE family protein [Mycobacterium ... 159 6e-37
gi|212596073|gb|ACJ35549.1| PPE24 [Mycobacterium avium subsp. av... 159 6e-37
>gi|15842698|ref|NP_337735.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|57117062|ref|YP_177932.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148662979|ref|YP_001284502.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
56 more sequence titles
Length=391
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT
Sbjct 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA
Sbjct 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL
Sbjct 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT 240
AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT
Sbjct 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT 240
Query 241 SPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQ 300
SPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQ
Sbjct 241 SPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQ 300
Query 301 LVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAG 360
LVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAG
Sbjct 301 LVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAG 360
Query 361 AGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
AGMPGGLMDRDGAGWHVTQARLTVIPRTGVG
Sbjct 361 AGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
>gi|31794300|ref|NP_856793.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31619896|emb|CAD95240.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=391
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/391 (99%), Positives = 390/391 (99%), Gaps = 0/391 (0%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLA DLWASASSFESVLAALTTGPWT
Sbjct 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAVDLWASASSFESVLAALTTGPWT 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA
Sbjct 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL
Sbjct 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT 240
AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT
Sbjct 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT 240
Query 241 SPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQ 300
SPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQ
Sbjct 241 SPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQ 300
Query 301 LVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAG 360
LVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAG
Sbjct 301 LVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAG 360
Query 361 AGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
AGMPGGLMDRDGAGWHVTQARLTVIPRTGVG
Sbjct 361 AGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
>gi|306777439|ref|ZP_07415776.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|306973558|ref|ZP_07486219.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|307081266|ref|ZP_07490436.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308214155|gb|EFO73554.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308357045|gb|EFP45896.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308361000|gb|EFP49851.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=391
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/391 (99%), Positives = 390/391 (99%), Gaps = 0/391 (0%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT
Sbjct 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA
Sbjct 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL
Sbjct 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT 240
AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT
Sbjct 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT 240
Query 241 SPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQ 300
SPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQ
Sbjct 241 SPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQ 300
Query 301 LVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAG 360
LVGSMSVPPTWQGSIPISMASSAMSG GVPPNPVALTQAAGAAGGGMPMMLMPMSISGAG
Sbjct 301 LVGSMSVPPTWQGSIPISMASSAMSGWGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAG 360
Query 361 AGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
AGMPGGLMDRDGAGWHVTQARLTVIPRTGVG
Sbjct 361 AGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
>gi|308370157|ref|ZP_07666873.1| putative PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308371764|ref|ZP_07667245.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308373649|ref|ZP_07667620.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308325156|gb|EFP14007.1| putative PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308335519|gb|EFP24370.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308336851|gb|EFP25702.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
Length=366
Score = 590 bits (1520), Expect = 2e-166, Method: Compositional matrix adjust.
Identities = 365/366 (99%), Positives = 366/366 (100%), Gaps = 0/366 (0%)
Query 26 LFAAASAWEGLAADLWASASSFESVLAALTTGPWTGPASMSMAAAASPYVGWLSTVASQA 85
+FAAASAWEGLAADLWASASSFESVLAALTTGPWTGPASMSMAAAASPYVGWLSTVASQA
Sbjct 1 MFAAASAWEGLAADLWASASSFESVLAALTTGPWTGPASMSMAAAASPYVGWLSTVASQA 60
Query 86 QLAAIQARAAATAFEAALAATVHPTAVTANRVSLASLIAANVLGQNTPAIAATEFDYLEM 145
QLAAIQARAAATAFEAALAATVHPTAVTANRVSLASLIAANVLGQNTPAIAATEFDYLEM
Sbjct 61 QLAAIQARAAATAFEAALAATVHPTAVTANRVSLASLIAANVLGQNTPAIAATEFDYLEM 120
Query 146 WAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAAQVGTQVAGMATTASAAVTPVVEG 205
WAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAAQVGTQVAGMATTASAAVTPVVEG
Sbjct 121 WAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAAQVGTQVAGMATTASAAVTPVVEG 180
Query 206 AMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILTSPITTLASMARESATRLGPPAGGLA 265
AMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILTSPITTLASMARESATRLGPPAGGLA
Sbjct 181 AMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILTSPITTLASMARESATRLGPPAGGLA 240
Query 266 AANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMS 325
AANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMS
Sbjct 241 AANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMS 300
Query 326 GLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVI 385
GLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVI
Sbjct 301 GLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVI 360
Query 386 PRTGVG 391
PRTGVG
Sbjct 361 PRTGVG 366
>gi|121639007|ref|YP_979231.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991499|ref|YP_002646188.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121494655|emb|CAL73136.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224774614|dbj|BAH27420.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341603046|emb|CCC65724.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=282
Score = 514 bits (1323), Expect = 1e-143, Method: Compositional matrix adjust.
Identities = 271/272 (99%), Positives = 271/272 (99%), Gaps = 0/272 (0%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLA DLWASASSFESVLAALTTGPWT
Sbjct 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAVDLWASASSFESVLAALTTGPWT 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA
Sbjct 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL
Sbjct 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT 240
AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT
Sbjct 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT 240
Query 241 SPITTLASMARESATRLGPPAGGLAAANTPNP 272
SPITTLASMARESATRLGPPAGGLAAANTPNP
Sbjct 241 SPITTLASMARESATRLGPPAGGLAAANTPNP 272
>gi|306799075|ref|ZP_07437377.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308340505|gb|EFP29356.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006]
Length=213
Score = 401 bits (1030), Expect = 1e-109, Method: Compositional matrix adjust.
Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT
Sbjct 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA
Sbjct 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL
Sbjct 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTV 213
AAQVGTQVAGMATTASAAVTPVVEGAMASVPTV
Sbjct 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTV 213
>gi|183984295|ref|YP_001852586.1| PPE family protein, PPE49 [Mycobacterium marinum M]
gi|183177621|gb|ACC42731.1| PPE family protein, PPE49 [Mycobacterium marinum M]
Length=389
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 210/329 (64%), Positives = 254/329 (78%), Gaps = 5/329 (1%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+L F+WLPPEINS R+F+GAGSGPLFAAASAWEGLA DL+ASASSF+SV++ L++G W+
Sbjct 1 MMLDFAWLPPEINSTRIFSGAGSGPLFAAASAWEGLAQDLYASASSFDSVVSGLSSGSWS 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS+SMAAAA+PYVGWLS A QA+ AA QAR AATAFEAAL+ATVHP AVTANR+SL
Sbjct 61 GPASVSMAAAAAPYVGWLSAAAGQAESAANQARTAATAFEAALSATVHPAAVTANRMSLV 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
SL+A N+LGQNTPAIAA EFDYLEMWAQDVAAMVGYH GA SVAA L PFSLPPV LAGL
Sbjct 121 SLVATNILGQNTPAIAANEFDYLEMWAQDVAAMVGYHGGASSVAAALVPFSLPPVDLAGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILT 240
A+Q+GTQ GM T+AS+A+ V+ MA+VPT ++ +QS LPLQ ASML P +
Sbjct 181 ASQIGTQAFGMVTSASSALATPVQSVMAAVPTALTTLQS----LPLQDASMLMYPFSMAM 236
Query 241 SPITTLASMA-RESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQA 299
SP+ L S + R S + A+ A + K +GG LG+ +SAGLG+A
Sbjct 237 SPLMNLMSSSLRGSTAGVAGATAAGIPASAAKLVDAPVSGVKAMGGAGLGSSISAGLGKA 296
Query 300 QLVGSMSVPPTWQGSIPISMASSAMSGLG 328
++VG++SVPPTW+GS+P MASSAMSGLG
Sbjct 297 RMVGAVSVPPTWEGSMPTRMASSAMSGLG 325
>gi|308374780|ref|ZP_07437376.2| hypothetical protein TMFG_00329 [Mycobacterium tuberculosis SUMu006]
gi|308340709|gb|EFP29560.1| hypothetical protein TMFG_00329 [Mycobacterium tuberculosis SUMu006]
Length=166
Score = 319 bits (817), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/166 (99%), Positives = 166/166 (100%), Gaps = 0/166 (0%)
Query 226 LQHASMLFLPVRILTSPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGG 285
+QHASMLFLPVRILTSPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGG
Sbjct 1 MQHASMLFLPVRILTSPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGG 60
Query 286 RELGAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGG 345
RELGAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGG
Sbjct 61 RELGAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGG 120
Query 346 GMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
GMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG
Sbjct 121 GMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 166
>gi|240170236|ref|ZP_04748895.1| PPE family protein, PPE49 [Mycobacterium kansasii ATCC 12478]
Length=388
Score = 316 bits (809), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 211/346 (61%), Positives = 254/346 (74%), Gaps = 13/346 (3%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+ F+WLPPE+NSAR+FAGAGSGPL AASAWE LAADL ASA+SF+SV++ L GPW+
Sbjct 1 MIPEFAWLPPEVNSARIFAGAGSGPLHTAASAWESLAADLRASAASFDSVVSGLAAGPWS 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS+SMAAAA+PYVGWLS A +A+ AA+QARAAAT FEAAL+ATVHP AVTANRVS+
Sbjct 61 GPASVSMAAAATPYVGWLSGAAGEAESAAVQARAAATVFEAALSATVHPAAVTANRVSVL 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVS---L 177
SL+A N LGQNTPAIAA E DYLEMWAQDVAAMVGY AGA SVA+TL PFSLPP++ L
Sbjct 121 SLVATNFLGQNTPAIAAAEGDYLEMWAQDVAAMVGYQAGATSVASTLTPFSLPPLTMAGL 180
Query 178 AGLAAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVR 237
AGLA+Q + V +A++A AA+ V+G +++ P+ +S +QS LPL S PV
Sbjct 181 AGLASQAASGVTAIASSAGAAIATPVQGIVSAAPSALSMLQS----LPL---SSFMYPVS 233
Query 238 ILTSPI-TTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGL 296
+ SP+ + L + AR A L G AAA P GAA P KP G LG+ MSAGL
Sbjct 234 MAISPLMSVLTNAARTPAAGLAGATAGGAAAGEPKFVGAAHPGTKPFAGGGLGSAMSAGL 293
Query 297 GQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVP--PNPVALTQAA 340
G+A++VG+MSVPPTWQGS P MASS +SGLG NP LT AA
Sbjct 294 GKARMVGTMSVPPTWQGSTPTRMASSPLSGLGAAGMANPAELTGAA 339
>gi|183983644|ref|YP_001851935.1| PPE family protein [Mycobacterium marinum M]
gi|183176970|gb|ACC42080.1| PPE family protein [Mycobacterium marinum M]
Length=388
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 234/396 (60%), Positives = 288/396 (73%), Gaps = 13/396 (3%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+L F+WLPPEINSAR+F+GAGSGPL AA+AW+GLAADL ASA+SF SV+++L +GPW+
Sbjct 1 MILDFAWLPPEINSARIFSGAGSGPLHMAAAAWQGLAADLAASAASFNSVISSLASGPWS 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS+SMAAAA+PYVGWL A QA AA QAR AATAFE AL+ATVHP AVTANR SL
Sbjct 61 GPASVSMAAAAAPYVGWLDAAAGQAAAAASQARVAATAFETALSATVHPAAVTANRTSLV 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
SLI N LGQNTPAIAATEFDY+EMWAQDV AMVGY AGA SVAA L PFS+PP+ LAGL
Sbjct 121 SLITTNFLGQNTPAIAATEFDYVEMWAQDVGAMVGYDAGATSVAAALTPFSIPPLDLAGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASM-----LFLP 235
AA + QVAG+AT +AA++P +GA+A +P V++G+QS + +PLQ ++
Sbjct 181 AAGINAQVAGVATAMTAAISPAAQGAIAGLPGVVAGVQSAAAAVPLQSVMQVAQIGMYPA 240
Query 236 VRILTSPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAG 295
+++ + L S SA G A G AAA+ P A P K LGG LGAGM+A
Sbjct 241 SMMMSPMMQLLNS--ANSAGLAGTQAAGFAAADMPKMVDAVSP-MKGLGGAGLGAGMAAD 297
Query 296 LGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMS 355
LG+A+LVG+MSVPPTW+GSIP +++SAM+GLG P + A A M MM MPM
Sbjct 298 LGKARLVGAMSVPPTWEGSIPKGLSTSAMAGLGAMP-----AEIAEAGRAPMGMMPMPMG 352
Query 356 ISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
+ GAGAGMPGG++ R GA HV Q+R +V+PR GVG
Sbjct 353 MGGAGAGMPGGMLGRGGASPHVVQSRPSVVPRIGVG 388
>gi|340627363|ref|YP_004745815.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340627365|ref|YP_004745817.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340005553|emb|CCC44715.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340005555|emb|CCC44717.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=391
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 245/397 (62%), Positives = 293/397 (74%), Gaps = 12/397 (3%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+
Sbjct 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGL
Sbjct 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPV 236
A+Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ QS+ + LP LQ P
Sbjct 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
Query 237 RILTSPITTLASMARESAT--RLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSA 294
+L P+ LA M + T G A GLAAA+ P +G G LGAGMSA
Sbjct 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
Query 295 GLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPM 354
LG+A+LVG+MSVPPTW+GS+P MASSAM+GLG P V AAGG M MM +PM
Sbjct 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVP------AAGGPMGMMPLPM 354
Query 355 SISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
+ GAGAGMP G+M R GA HV QAR +V+PR G+G
Sbjct 355 GMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
>gi|289575045|ref|ZP_06455272.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289539476|gb|EFD44054.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=389
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 228/397 (58%), Positives = 274/397 (70%), Gaps = 14/397 (3%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+
Sbjct 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGL
Sbjct 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPV 236
A+Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ QS+ + LP LQ P
Sbjct 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
Query 237 RILTSPITTLASMARESAT--RLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSA 294
+L P+ LA M + T G A GLAAA+ P +G G LGAGMSA
Sbjct 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
Query 295 GLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPM 354
LG+A+LVG+MSVPPTW+GS+P MASSAM+GLG P V
Sbjct 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMGMGGAGAG 360
Query 355 SISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
+G R GA HV QAR +V+PR G+G
Sbjct 361 MPAGMMG--------RGGANPHVVQARPSVVPRVGIG 389
>gi|15841861|ref|NP_336898.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|57116974|ref|YP_177870.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148662181|ref|YP_001283704.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
67 more sequence titles
Length=391
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 231/397 (59%), Positives = 277/397 (70%), Gaps = 12/397 (3%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+
Sbjct 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGL
Sbjct 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPV 236
A+Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ QS+ + LP LQ P
Sbjct 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
Query 237 RILTSPITTLASMARESAT--RLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSA 294
+L P+ LA M + T G A GLAAA+ P +G G LGAGMSA
Sbjct 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
Query 295 GLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPM 354
LG+A+LVG+MSVPPTW+GS+P MASSAM+GLG P V M
Sbjct 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG 360
Query 355 SISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
+ AG M R GA HV QAR +V+PR G+G
Sbjct 361 AGMPAGM------MGRGGANPHVVQARPSVVPRVGIG 391
>gi|167969910|ref|ZP_02552187.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|289575048|ref|ZP_06455275.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289539479|gb|EFD44057.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=406
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 231/397 (59%), Positives = 277/397 (70%), Gaps = 12/397 (3%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+
Sbjct 16 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 75
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 76 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 135
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGL
Sbjct 136 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 195
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPV 236
A+Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ QS+ + LP LQ P
Sbjct 196 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 255
Query 237 RILTSPITTLASMARESAT--RLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSA 294
+L P+ LA M + T G A GLAAA+ P +G G LGAGMSA
Sbjct 256 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 315
Query 295 GLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPM 354
LG+A+LVG+MSVPPTW+GS+P MASSAM+GLG P V M
Sbjct 316 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG 375
Query 355 SISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
+ AG M R GA HV QAR +V+PR G+G
Sbjct 376 AGMPAGM------MGRGGANPHVVQARPSVVPRVGIG 406
>gi|183983641|ref|YP_001851932.1| PPE family protein [Mycobacterium marinum M]
gi|183176967|gb|ACC42077.1| PPE family protein [Mycobacterium marinum M]
Length=387
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 241/395 (62%), Positives = 293/395 (75%), Gaps = 12/395 (3%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+L F+WLPPEINSAR+F+GAGSGPL AA+AW+GLAADL ASA+SF SV+++L +GPW+
Sbjct 1 MILDFAWLPPEINSARIFSGAGSGPLHMAAAAWQGLAADLAASAASFNSVISSLASGPWS 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS+SMAAAA+PYVGWL A QA AA QAR AATAFE AL+ATVHP AVTANR SL
Sbjct 61 GPASVSMAAAAAPYVGWLDAAAGQAAAAASQARVAATAFETALSATVHPAAVTANRTSLV 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
SLI N LGQNTPAIAATEFDY+EMWAQDV AMVGY AGA SVAA L PFS+PP+ LAGL
Sbjct 121 SLITTNFLGQNTPAIAATEFDYVEMWAQDVGAMVGYDAGATSVAAALTPFSIPPLDLAGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQH----ASMLFLPV 236
AA + QVAG+AT +AA++P EGA+A +P V++G+QS + +PL A + P
Sbjct 181 AAGINAQVAGVATAMTAAISPAAEGAIAGLPGVVAGVQSAAAAVPLDSVMSVAQIGMYPA 240
Query 237 RILTSPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGL 296
+L P+ L S A +A G A GLAAA+ P A P K LGG LGAGM+A L
Sbjct 241 SMLMGPLMQLGSSAN-TAGLAGAQAAGLAAADMPKMVDAISP-MKGLGGAGLGAGMAADL 298
Query 297 GQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSI 356
G+A+LVG+MSVPPTW+GSIP +++SAM+GLG A+ + AGA G M MM MPM +
Sbjct 299 GKARLVGAMSVPPTWEGSIPKGLSTSAMAGLG------AMPEVAGAGGAPMGMMPMPMGM 352
Query 357 SGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
GAGAGMPGG++ R GA HV Q+R +V+PR GVG
Sbjct 353 GGAGAGMPGGMLGRGGASPHVVQSRPSVVPRIGVG 387
>gi|297634951|ref|ZP_06952731.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length=389
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 229/395 (58%), Positives = 275/395 (70%), Gaps = 12/395 (3%)
Query 3 LGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGP 62
+ FSWLPPEINSAR++AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+GP
Sbjct 1 MDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 60
Query 63 ASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASL 122
AS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L +L
Sbjct 61 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 120
Query 123 IAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAA 182
+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGLA+
Sbjct 121 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLAS 180
Query 183 QVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPVRI 238
Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ QS+ + LP LQ P +
Sbjct 181 QAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASM 240
Query 239 LTSPITTLASMARESAT--RLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGL 296
L P+ LA M + T G A GLAAA+ P +G G LGAGMSA L
Sbjct 241 LIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAEL 300
Query 297 GQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSI 356
G+A+LVG+MSVPPTW+GS+P MASSAM+GLG P V M +
Sbjct 301 GKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAG 360
Query 357 SGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
AG M R GA HV QAR +V+PR G+G
Sbjct 361 MPAGM------MGRGGANPHVVQARPSVVPRVGIG 389
>gi|15841864|ref|NP_336901.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13882130|gb|AAK46715.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
Length=415
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 228/397 (58%), Positives = 273/397 (69%), Gaps = 19/397 (4%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+
Sbjct 32 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 91
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 92 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 151
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGL
Sbjct 152 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 211
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPV 236
A+Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ QS+ + LP LQ P
Sbjct 212 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 271
Query 237 RILTSPITTLASMARESAT--RLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSA 294
+L P+ LA M + T G A GLAAA+ P +G G LGAGMSA
Sbjct 272 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 331
Query 295 GLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPM 354
LG+A+LVG+MSVPPTW+GS+P MASSAM+GLG P V M M
Sbjct 332 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMPAGM 391
Query 355 SISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
G A HV QAR +V+PR G+G
Sbjct 392 MGRGG-------------ANPHVVQARPSVVPRVGIG 415
>gi|240170238|ref|ZP_04748897.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=385
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 216/405 (54%), Positives = 266/405 (66%), Gaps = 34/405 (8%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+L F+WLPPE+NSAR+FAG GSGPL AASAW LAADL ASA+SF+SV+ L TG W+
Sbjct 1 MILDFAWLPPEVNSARIFAGCGSGPLLRAASAWLSLAADLRASAASFDSVVTRLATGQWS 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS+SMAAAA+P+VGWLS A +A+L A QAR AATAFEAAL+ATVHP AVTANR+ L
Sbjct 61 GPASVSMAAAAAPFVGWLSGAAGEAELTAAQARVAATAFEAALSATVHPAAVTANRLRLR 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVS--LA 178
SL+ N L QNTPAIAATEFDY EMWAQDVAAM GYHAGA SVA+T+APFS PP + LA
Sbjct 121 SLVVTNFLAQNTPAIAATEFDYQEMWAQDVAAMAGYHAGAASVASTMAPFSPPPSNPGLA 180
Query 179 GLAAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRI 238
GLA+Q + V + ++A+A + A A+ +S + LP S+L P+ +
Sbjct 181 GLASQAASGVPSVVSSAAAPAQDIAAIASAA--------ESGLDSLPWSSVSLLMYPLSM 232
Query 239 LTSPITTLASMARESATRLGPPAGGLAAANTPNPSG--AAIPAFKPLGGREL-------- 288
SP+ +L S +ATR P GG+A A SG A +P + E+
Sbjct 233 AMSPLMSLMS----NATRT--PTGGMAGALA---SGLPADVPKLMTVPHAEITASGGGGL 283
Query 289 GAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVP--PNPVALTQAAGAAGGG 346
G+ M+A LG A++VG MSVPPTWQGS+P MASSAMSGLG P P ALT G
Sbjct 284 GSAMAADLGNARMVGGMSVPPTWQGSVPAPMASSAMSGLGAAGIPTPAALT---GEPSSP 340
Query 347 MPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
M+ M GAGMPG ++ R GA + Q+R VIP TG+G
Sbjct 341 GMPMMPMMPSGTGGAGMPGEMIGRGGASPNAPQSRSGVIPVTGIG 385
>gi|326903969|gb|EGE50902.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
W-148]
Length=374
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 217/380 (58%), Positives = 261/380 (69%), Gaps = 12/380 (3%)
Query 18 FAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGPASMSMAAAASPYVGW 77
+AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+GPAS++MA AA+PYVGW
Sbjct 1 YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW 60
Query 78 LSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASLIAANVLGQNTPAIAA 137
LS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L +L+A N+LGQNTPAIAA
Sbjct 61 LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA 120
Query 138 TEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAAQVGTQVAGMATTASA 197
TEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGLA+Q G Q+ GMAT+ SA
Sbjct 121 TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA 180
Query 198 AVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPVRILTSPITTLASMARES 253
A++P+ EGA+ VP V++ QS+ + LP LQ P +L P+ LA M +
Sbjct 181 ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA 240
Query 254 AT--RLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTW 311
T G A GLAAA+ P +G G LGAGMSA LG+A+LVG+MSVPPTW
Sbjct 241 NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW 300
Query 312 QGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAGAGMPGGLMDRD 371
+GS+P MASSAM+GLG P V M + AG M R
Sbjct 301 EGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGM------MGRG 354
Query 372 GAGWHVTQARLTVIPRTGVG 391
GA HV QAR +V+PR G+G
Sbjct 355 GANPHVVQARPSVVPRVGIG 374
>gi|289745622|ref|ZP_06505000.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289686150|gb|EFD53638.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length=392
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 217/380 (58%), Positives = 261/380 (69%), Gaps = 12/380 (3%)
Query 18 FAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGPASMSMAAAASPYVGW 77
+AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+GPAS++MA AA+PYVGW
Sbjct 19 YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW 78
Query 78 LSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASLIAANVLGQNTPAIAA 137
LS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L +L+A N+LGQNTPAIAA
Sbjct 79 LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA 138
Query 138 TEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAAQVGTQVAGMATTASA 197
TEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGLA+Q G Q+ GMAT+ SA
Sbjct 139 TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA 198
Query 198 AVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPVRILTSPITTLASMARES 253
A++P+ EGA+ VP V++ QS+ + LP LQ P +L P+ LA M +
Sbjct 199 ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA 258
Query 254 AT--RLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTW 311
T G A GLAAA+ P +G G LGAGMSA LG+A+LVG+MSVPPTW
Sbjct 259 NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW 318
Query 312 QGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAGAGMPGGLMDRD 371
+GS+P MASSAM+GLG P V M + AG M R
Sbjct 319 EGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGM------MGRG 372
Query 372 GAGWHVTQARLTVIPRTGVG 391
GA HV QAR +V+PR G+G
Sbjct 373 GANPHVVQARPSVVPRVGIG 392
>gi|339298873|gb|AEJ50983.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=437
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 200/323 (62%), Positives = 240/323 (75%), Gaps = 6/323 (1%)
Query 18 FAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGPASMSMAAAASPYVGW 77
+AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+GPAS++MA AA+PYVGW
Sbjct 19 YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW 78
Query 78 LSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASLIAANVLGQNTPAIAA 137
LS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L +L+A N+LGQNTPAIAA
Sbjct 79 LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA 138
Query 138 TEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAAQVGTQVAGMATTASA 197
TEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGLA+Q G Q+ GMAT+ SA
Sbjct 139 TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA 198
Query 198 AVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPVRILTSPITTLASMARES 253
A++P+ EGA+ VP V++ QS+ + LP LQ P +L P+ LA M +
Sbjct 199 ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA 258
Query 254 AT--RLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTW 311
T G A GLAAA+ P +G G LGAGMSA LG+A+LVG+MSVPPTW
Sbjct 259 NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW 318
Query 312 QGSIPISMASSAMSGLGVPPNPV 334
+GS+P MASSAM+GLG P V
Sbjct 319 EGSVPARMASSAMAGLGAMPAEV 341
>gi|294994545|ref|ZP_06800236.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|339295254|gb|AEJ47365.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=364
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 199/359 (56%), Positives = 241/359 (68%), Gaps = 12/359 (3%)
Query 39 DLWASASSFESVLAALTTGPWTGPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATA 98
DL ASASSF++V+A L GPW+GPAS++MA AA+PYVGWLS A QA+L+A QA AAATA
Sbjct 12 DLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATA 71
Query 99 FEAALAATVHPTAVTANRVSLASLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHA 158
FEAALAATVHP AVTANRV L +L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHA
Sbjct 72 FEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHA 131
Query 159 GAKSVAATLAPFSLPPVSLAGLAAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQ 218
GA +VA TL PFS+PP+ LAGLA+Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ Q
Sbjct 132 GAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQ 191
Query 219 SLVSQLP----LQHASMLFLPVRILTSPITTLASMARESAT--RLGPPAGGLAAANTPNP 272
S+ + LP LQ P +L P+ LA M + T G A GLAAA+ P
Sbjct 192 SVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTF 251
Query 273 SGAAIPAFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPN 332
+G G LGAGMSA LG+A+LVG+MSVPPTW+GS+P MASSAM+GLG P
Sbjct 252 AGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPA 311
Query 333 PVALTQAAGAAGGGMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
V M + AG M R GA HV QAR +V+PR G+G
Sbjct 312 EVPAAGGPMGMMPMPMGMGGAGAGMPAGM------MGRGGANPHVVQARPSVVPRVGIG 364
>gi|289762519|ref|ZP_06521897.1| ppe family protein [Mycobacterium tuberculosis GM 1503]
gi|289710025|gb|EFD74041.1| ppe family protein [Mycobacterium tuberculosis GM 1503]
Length=373
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 198/358 (56%), Positives = 240/358 (68%), Gaps = 12/358 (3%)
Query 40 LWASASSFESVLAALTTGPWTGPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAF 99
L ASASSF++V+A L GPW+GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAF
Sbjct 22 LRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAF 81
Query 100 EAALAATVHPTAVTANRVSLASLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAG 159
EAALAATVHP AVTANRV L +L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAG
Sbjct 82 EAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAG 141
Query 160 AKSVAATLAPFSLPPVSLAGLAAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQS 219
A +VA TL PFS+PP+ LAGLA+Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ QS
Sbjct 142 AAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQS 201
Query 220 LVSQLP----LQHASMLFLPVRILTSPITTLASMARESAT--RLGPPAGGLAAANTPNPS 273
+ + LP LQ P +L P+ LA M + T G A GLAAA+ P +
Sbjct 202 VAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFA 261
Query 274 GAAIPAFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNP 333
G G LGAGMSA LG+A+LVG+MSVPPTW+GS+P MASSAM+GLG P
Sbjct 262 GDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAE 321
Query 334 VALTQAAGAAGGGMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
V M + AG M R GA HV QAR +V+PR G+G
Sbjct 322 VPAAGGPMGMMPMPMGMGGAGAGMPAGM------MGRGGANPHVVQARPSVVPRVGIG 373
>gi|254551401|ref|ZP_05141848.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=261
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 153/205 (75%), Positives = 179/205 (88%), Gaps = 0/205 (0%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+
Sbjct 16 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 75
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 76 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 135
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGL
Sbjct 136 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 195
Query 181 AAQVGTQVAGMATTASAAVTPVVEG 205
A+Q G Q+ GMAT+ SAA++P+ EG
Sbjct 196 ASQAGAQLTGMATSVSAALSPIAEG 220
>gi|342857484|ref|ZP_08714140.1| hypothetical protein MCOL_01370 [Mycobacterium colombiense CECT
3035]
gi|342134817|gb|EGT87983.1| hypothetical protein MCOL_01370 [Mycobacterium colombiense CECT
3035]
Length=408
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 174/415 (42%), Positives = 233/415 (57%), Gaps = 37/415 (8%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+ F + PPEINSA + G G+GPLF AASAW+GLA +L +SASSF + ++ L G W
Sbjct 1 MIPAFVFFPPEINSALIIGGPGAGPLFEAASAWDGLAVELSSSASSFHTTVSDLAGGAWM 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GP+SMSM AAA+PYV WL A+QA++AA+QAR AA A+E AL ATV V ANR L
Sbjct 61 GPSSMSMTAAAAPYVEWLIIAAAQAEVAALQARIAALAYEGALVATVPLPEVLANRARLL 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
LIA N G NT AIA TE +Y+EMWAQDVAAM+GYHAGA+S+A L FS+PP +L G
Sbjct 121 VLIATNFFGINTAAIAQTELEYVEMWAQDVAAMLGYHAGAQSMAQALPDFSVPPAALGGS 180
Query 181 AAQVGTQ-VAGMATTASAAVTPVVEG----------AMASVPTVMSGMQSLVSQLPLQHA 229
A +AG+ T + + +G + SV +S SL+S P+
Sbjct 181 APTADLAGLAGLVTAPLSLASQFFQGLSSLGTAFASELQSVLGALSPAVSLLSSTPVATL 240
Query 230 SML----FLPVRILTSPITTLASMARESATRLGPPAGGL----------AAANTPNPSGA 275
+ + P L +P+ TLA A + P + A + P+ SG+
Sbjct 241 TTVAQAGMYPATALMTPMVTLAQSAGPAGPAAAPASAPTLAPALVNAASAPLSAPHSSGS 300
Query 276 AIPAFKP--LGGRELGAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNP 333
A+ +P GG +AGLG A+ +GS+SVP W+GS+P +A+ AMSG+G
Sbjct 301 ALSDLQPLAGGGLGALGVATAGLGGARFIGSLSVPAAWEGSMPAYIATPAMSGVGAGTPA 360
Query 334 VALTQAAGAAGGGMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRT 388
VA A +G G+PM MP+ G P G DR G V ++R V+PR
Sbjct 361 VA---AGTGSGSGVPMAAMPV-----GDKKPEG-EDR-GTRAQVVRSRPKVVPRN 405
>gi|342859619|ref|ZP_08716272.1| PPE family protein [Mycobacterium colombiense CECT 3035]
gi|342132751|gb|EGT85971.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=458
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 145/335 (44%), Positives = 194/335 (58%), Gaps = 32/335 (9%)
Query 3 LGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGP 62
+ F+ LPPE+NSARM+AG GSGP+ AAA AW+ +AA L +A+S+++ + ALT+GPW GP
Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDEVAAALQTTANSYQAEITALTSGPWVGP 60
Query 63 ASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASL 122
+S +M AA +PY+ W+ T +QA+ A QAR AA A+E A A TV P VTANR LA+L
Sbjct 61 SSAAMVAAITPYLEWMRTAGAQAEETANQARTAAFAYETAFAETVPPPVVTANRTQLAAL 120
Query 123 IAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLP-PVSLAGLA 181
+A NVLGQNTPAIAATE +Y EMWA+D AAM GY AG + A L PFS P P S +G A
Sbjct 121 VATNVLGQNTPAIAATEAEYGEMWARDTAAMFGY-AGTTASATRLTPFSQPDPTSNSG-A 178
Query 182 AQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQ-SLVSQLPLQHASMLFLPVRILT 240
Q ++ A TA+ + V+ + ++VP ++S S + P +L L ++
Sbjct 179 GQ--SEAVAQAGTAAGSTRNTVQQSFSAVPNLLSNAALSPAAISPTSATDLLGLESDLIA 236
Query 241 SPITTLASMA----RESATRLGPP---AGGLAAANTPN-----------PSGAAIP---- 278
+ AS+A T + P AG L +T + P A+P
Sbjct 237 IFLDAPASVAGLGIDAPGTLVALPFDVAGALTGFHTDDIVSGWAGVQAWPGTGAVPPSPF 296
Query 279 --AFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTW 311
P GG G SAGLGQA VG +SVPP W
Sbjct 297 PVITNPAGG--FGTLASAGLGQASTVGGLSVPPGW 329
>gi|254774763|ref|ZP_05216279.1| hypothetical protein MaviaA2_08838 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|212595953|gb|ACJ35538.1| PPE13 [Mycobacterium avium subsp. avium]
Length=410
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 173/421 (42%), Positives = 233/421 (56%), Gaps = 41/421 (9%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+ F + PPEINSA + GAGSGPLF AASAW+GLAA+L +SASSF++V+ L GPW
Sbjct 1 MIPAFVFFPPEINSALIAGGAGSGPLFEAASAWDGLAAELSSSASSFQTVVTDLAAGPWM 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GP+S++M AAA+PYV WL A+QA++AA+QAR AA AFE AL ATV AV ANR L
Sbjct 61 GPSSVAMTAAAAPYVQWLIIAAAQAEVAALQARLAALAFEGALVATVPLPAVLANRARLL 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLA-- 178
LIA N GQNT AIA TE +Y+EMW +DVAAM+GYHAGA+S A L F++PP L
Sbjct 121 VLIATNFFGQNTAAIAQTELEYVEMWLRDVAAMLGYHAGAQSAAQALPAFTVPPAGLGGG 180
Query 179 -----------------GLAAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLV 221
A+Q G+++ +A T ++ +A++P +S + SL+
Sbjct 181 AASAGLGGLAGLVSAPLSFASQF---FEGLSSLGTAFAT-QLQSVLAALPPAVSSLTSLI 236
Query 222 SQLPLQHASML----FLPVRILTSPITTLASMARESATRLGPPAGGLAA-----ANTPNP 272
+ P+ + + P L +P+ TLA +A PA L TP+
Sbjct 237 TSTPVATLTSVAQAGMYPATALMTPMVTLAQSTAPAAAPAATPAPALVNTAKMPVETPHA 296
Query 273 SGAAIPAFKP--LGGRELGAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVP 330
+ + +P GG SAGLG A+ VG+M+VPPTWQGS+P +A+ AMSG
Sbjct 297 AANPLADLQPLAGGGLGALGVASAGLGTARFVGAMAVPPTWQGSMPAYIATPAMSG---- 352
Query 331 PNPVALTQAAGAAGGGMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGV 390
P A A G +P++ G P G DR V ++R V+PR
Sbjct 353 -APGAAPMTAATTGSTGSSSGVPVTAMAVGDKKPEG-EDRATRA-EVVRSRPKVVPRNRP 409
Query 391 G 391
G
Sbjct 410 G 410
>gi|41408234|ref|NP_961070.1| hypothetical protein MAP2136c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396589|gb|AAS04453.1| hypothetical protein MAP_2136c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=410
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 170/421 (41%), Positives = 229/421 (55%), Gaps = 41/421 (9%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+ F + PPEINSA + GAGSGPLF AASAW+GLAA+L +SASSF++V+ L G W
Sbjct 1 MIPAFVFFPPEINSALIAGGAGSGPLFEAASAWDGLAAELSSSASSFQTVVTDLAAGSWM 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GP+S++M AAA+PYV WL A+QA++AA+QAR AA AFE AL ATV AV ANR L
Sbjct 61 GPSSVAMTAAAAPYVQWLIIAAAQAEVAALQARLAALAFEGALVATVPLPAVLANRARLL 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLA-- 178
LIA N GQNT AIA TE +Y+EMW +DVAAM+GYHAGA+S A L F++PP L
Sbjct 121 VLIATNFFGQNTAAIAQTELEYVEMWLRDVAAMLGYHAGAQSAAQALPAFTVPPAGLGGG 180
Query 179 -----------------GLAAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLV 221
A+Q ++ + T A ++ +A++P +S + SL+
Sbjct 181 AASAGLGGLAGLVSAPLSFASQFFEGLSSLGT----AFATQLQSVLAALPPAVSSLTSLI 236
Query 222 SQLPLQHASML----FLPVRILTSPITTLASMARESATRLGPPAGGLAA-----ANTPNP 272
+ P+ + + P L +P+ TLA +A P L TP+
Sbjct 237 TSTPVATLTSVAQAGMYPATALMTPMVTLAQSTAPAAAPAATPTPALVNTAKMPVETPHA 296
Query 273 SGAAIPAFKP--LGGRELGAGMSAGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVP 330
+ + +P GG SAGLG A+ VG+M+VPPTWQGS+P +A+ AMSG
Sbjct 297 AANPLADLQPLAGGGLGALGVASAGLGTARFVGAMAVPPTWQGSMPAYIATPAMSG---- 352
Query 331 PNPVALTQAAGAAGGGMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGV 390
P A A G +P++ G P G DR V ++R V+PR
Sbjct 353 -APGAAPMTAATTGSTGSSSGVPVTAMAVGDKKPEG-EDRATRA-EVVRSRPKVVPRNRP 409
Query 391 G 391
G
Sbjct 410 G 410
>gi|296166320|ref|ZP_06848757.1| PPE13 protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898329|gb|EFG77898.1| PPE13 protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=403
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 181/408 (45%), Positives = 236/408 (58%), Gaps = 28/408 (6%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+ F PPEINSA M+ GAG GPL AASAW+ LAADL A+A+SFESV+ + GPWT
Sbjct 1 MIPAFMLFPPEINSALMYGGAGPGPLLTAASAWQALAADLAAAAASFESVVTGVAAGPWT 60
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GP+S +M AAA+PY+ WL + A QA++AA QA AAATA+EAA ATV AV ANR+ L
Sbjct 61 GPSSAAMVAAATPYLQWLISAAGQAEIAAAQATAAATAYEAAFMATVPTPAVLANRIRLL 120
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
+LIA N GQNTPAIA TE +Y+EMWAQDVAAMVGYH GA++VAA+L FS+PPV L GL
Sbjct 121 ALIATNFFGQNTPAIAMTEIEYMEMWAQDVAAMVGYHVGAQTVAASLPAFSVPPVGLGGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGM-------QSLVSQLPLQH----A 229
+ V T A+ A A + + G ++ + +V+ SL+S +P+ A
Sbjct 181 SGLV-TAPLSFASQALGAFSSLGAGFVSDLQSVLGAFFPGLSSVTSLLSSMPVTTMTALA 239
Query 230 SMLFLPVRILTSPITTLASMARESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGRELG 289
M P L SP+ LA +A A T + A A L G +
Sbjct 240 PMGMYPASALMSPMMVLAHNVGPAAAP-------AMAGVTTVAAQAPQAAASGLQGLQSA 292
Query 290 AGM---SAGLGQAQLVGSMSVPPTWQGSIPIS--MASSAMSGLGVP-PNPVA---LTQAA 340
G+ +AGLG A+ VG+++VPPTWQGS+P+ + S A+ LG P P+A + +
Sbjct 293 GGLGVATAGLGTARFVGAITVPPTWQGSMPVPAVLTSLAVPALGTQLPTPLATGGASSPS 352
Query 341 GAAGGGMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRT 388
A G P + M M A R G HV Q+R V+PRT
Sbjct 353 SAPAGSTPAVAMAMDGRNADEDKTDARGRRGGENPHVVQSRPKVVPRT 400
>gi|240169037|ref|ZP_04747696.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=391
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/338 (42%), Positives = 183/338 (55%), Gaps = 44/338 (13%)
Query 3 LGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGP 62
+ F LPPEINSARM+ G GSG L AAA W+G+A DL+ +AS+ +SV+ L GPW G
Sbjct 1 MDFGALPPEINSARMYTGPGSGSLLAAAQVWDGVAIDLYNAASAVQSVIWGLLVGPWRGT 60
Query 63 ASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASL 122
++ M AAASPYV WL T A+QA+L A Q R AATA+EAA A TV P + NR+ L +L
Sbjct 61 SAGLMVAAASPYVTWLGTTAAQAELTADQVRTAATAYEAAFATTVPPAVIAGNRIQLLTL 120
Query 123 IAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPP--VSLAGL 180
IA+N+ GQNTPAIA TE DY EMWAQD AAM GY A A TL PF P + GL
Sbjct 121 IASNLFGQNTPAIAVTEADYGEMWAQDAAAMYGYAGSAAVAAETLTPFDESPEITNAGGL 180
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMAS--VPTVMSGMQSLVS----QLPLQHASMLFL 234
Q G AV + A A+ + TV +Q L P L+
Sbjct 181 VQQAG------------AVEEATDTAAANQLISTVPQALQQLAEPGQGTTPFTAVGELWK 228
Query 235 PVRILTSPITTLASMARESATRLGPPAGGLAAANTPN-------PSGA-AIPAFKPLGGR 286
+ SPI+ + SM + L + G++ NT + P+ A A+ + G R
Sbjct 229 AISPHLSPISNIVSMLNNHVSML---SSGMSMTNTASSLLKGMAPAAAQAVESAVESGAR 285
Query 287 EL-------------GAGMSAGLGQAQLVGSMSVPPTW 311
+ G+G++AGLG+A +GS+SVP W
Sbjct 286 AMGSLGSGLGTSGIGGSGVAAGLGRALSIGSLSVPHGW 323
>gi|308370986|ref|ZP_07423462.2| putative PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308330170|gb|EFP19021.1| putative PPE family protein [Mycobacterium tuberculosis SUMu003]
Length=186
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/155 (79%), Positives = 138/155 (90%), Gaps = 0/155 (0%)
Query 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+
Sbjct 32 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 91
Query 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 92 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 151
Query 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVG 155
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVG
Sbjct 152 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVG 186
>gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacterium marinum M]
gi|183174804|gb|ACC39914.1| PPE family protein [Mycobacterium marinum M]
Length=427
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 144/357 (41%), Positives = 185/357 (52%), Gaps = 53/357 (14%)
Query 3 LGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGP 62
+ F LPPEINS RM+ G GSGP+ AAA W+ LAA+L+A+A+ + S L LT G W GP
Sbjct 1 MDFGALPPEINSGRMYVGPGSGPMLAAAVVWDELAAELYATAAGYRSTLDGLTGGSWRGP 60
Query 63 ASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASL 122
AS SMAAAA+PYV W++ A+QA+LA QA+ AA+A+E A AATV P + ANR L L
Sbjct 61 ASASMAAAAAPYVAWMTATAAQAELAGSQAKVAASAYETAFAATVPPPVIAANRALLMGL 120
Query 123 IAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPP--VSLAGL 180
+ N+ GQNTPAIAATE Y EMWAQD AAM Y AG+ + A + PF+ PP S +G
Sbjct 121 VFTNIFGQNTPAIAATEAHYAEMWAQDAAAMYAY-AGSSATATQVTPFTEPPQITSPSGA 179
Query 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQS------LVSQLPLQHASMLFL 234
+Q +AS+ +T + +A VP + GM + ++ LP + L
Sbjct 180 VSQAAAVTEAATASASSDITAQLSPLIAVVPNALQGMATSGNPAAAIAGLP-----DVAL 234
Query 235 PVRILTSPITTLASMARESATRLGP---------PAG-----GLAAANTPN--------- 271
P I IT L + T GP P G G A + N
Sbjct 235 PAGI----ITDLQNFTTILDTLDGPFTIQGLTGVPGGPFLAFGQVYAFSQNMVGAQAFFS 290
Query 272 PSGAAIPAFKPLGGR-ELGAGM-----------SAGLGQAQLVGSMSVPPTWQGSIP 316
P+ I PL G LGA S +G A LVG+MSVP W P
Sbjct 291 PAEPVIGGLAPLAGEANLGAAGVVGGPSVGGQASGAMGHAALVGNMSVPQGWTQEAP 347
>gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacterium sp. JDM601]
gi|333486619|gb|AEF36011.1| PPE family protein [Mycobacterium sp. JDM601]
Length=386
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/248 (48%), Positives = 160/248 (65%), Gaps = 10/248 (4%)
Query 3 LGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGP 62
+ F LPPEINSAR++AGAG G L AAA+AW+ LA +L ++A+S+ SV+A LTTG W GP
Sbjct 1 MDFGALPPEINSARIYAGAGPGSLLAAATAWQELATELNSAAASYGSVIAGLTTGSWAGP 60
Query 63 ASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASL 122
+S++MAAAA PY+ WL+ +QAQ AA Q AA A+E A AATV P +TANR A+L
Sbjct 61 SSVAMAAAAGPYITWLNATGAQAQQAAAQVSAAVAAYETAFAATVPPPLITANRSLQATL 120
Query 123 IAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAA 182
A N+LGQNT AIA TE DYLEMWAQD AAM GY AGA ++A ++PF+ PP + +
Sbjct 121 TATNILGQNTAAIATTEADYLEMWAQDTAAMYGY-AGASALATRVSPFTSPPQTT-DPSG 178
Query 183 QVGTQVAGMATTASAAVTPVVEGAM-------ASVPTVMSGMQSLVSQLPLQHASMLFLP 235
Q+ TQ +A +A+A E M ++ PT + G+ + ++ P +S
Sbjct 179 QI-TQSYSVAQSAAATTGTDTEALMSQGPQLISATPTALQGLAAPATETPSNASSASLSG 237
Query 236 VRILTSPI 243
+ LT P+
Sbjct 238 LTSLTMPL 245
>gi|183983558|ref|YP_001851849.1| PPE family protein [Mycobacterium marinum M]
gi|183176884|gb|ACC41994.1| PPE family protein [Mycobacterium marinum M]
Length=363
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/325 (43%), Positives = 176/325 (55%), Gaps = 34/325 (10%)
Query 5 FSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGPAS 64
+ LPPE+NS RM GAG P+ AA +AWEGLAA+L +A+SF SV L GPW GPAS
Sbjct 3 YGLLPPEVNSTRMHTGAGVAPMLAAGAAWEGLAAELSTAATSFGSVTTDLAGGPWQGPAS 62
Query 65 MSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASLIA 124
++M AA+PY+ WL+ A A AA A +AA FE ALA TVHP VTANR LA+L+A
Sbjct 63 VAMTTAAAPYIAWLTDAAGHAHTAATHAISAANVFETALATTVHPAVVTANRSLLATLVA 122
Query 125 ANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKS-VAATLAPFSLPPVSLAGLAAQ 183
N+LGQN+P IAATE Y +MWAQDVAAM Y +GA+S + A + PP A L
Sbjct 123 TNLLGQNSPTIAATEAAYEQMWAQDVAAMTAYDSGARSLITALKSEEKTPPPGDATLPEP 182
Query 184 VGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLPLQHASMLFLPVRILTSPI 243
+ T P G + M LVSQL + +P+ + +P+
Sbjct 183 IPTTTPKQ---------PAAGGGL---------MSGLVSQL-----AKSAMPLAMGLAPV 219
Query 244 TTLASMARESATRLGPP----AGGLAAANTPNPSGAAIPAFKPLGGRELGAGMSAGLGQA 299
A M + LGPP AGG + G + G +SA +GQA
Sbjct 220 ALSAGM-----SALGPPMSAAAGGAGPLAAAGAGAGITGGIAGVAGSQAGT-VSAAMGQA 273
Query 300 QLVGSMSVPPTWQGSIPISMASSAM 324
V ++SVPPTW S IS AS+A+
Sbjct 274 HSVRALSVPPTWGVSPTISGASNAV 298
>gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacterium colombiense CECT 3035]
gi|342131207|gb|EGT84488.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=417
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/172 (62%), Positives = 130/172 (76%), Gaps = 1/172 (0%)
Query 3 LGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGP 62
+ F LPPEINS RM+AG GSGP+ AAA+AW+GL A+L ++AS + SV++ LT PW GP
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPMMAAAAAWDGLGAELSSAASGYTSVISELTHAPWVGP 60
Query 63 ASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASL 122
AS SM +A +PYV WLS +A+QA+ A QARAAA AFEAA A TV P + ANRV LA+L
Sbjct 61 ASSSMLSAVTPYVSWLSVLAAQAEETAGQARAAAAAFEAAFAMTVPPPVIAANRVLLANL 120
Query 123 IAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPP 174
+A N LGQNTPAIAATE Y+EMWAQD AAM GY AG+ +VA+ L P + PP
Sbjct 121 VATNFLGQNTPAIAATEAQYMEMWAQDAAAMYGY-AGSSAVASELPPLTSPP 171
>gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|13377907|gb|AAK20893.1| Rv1808-like protein [Mycobacterium microti]
gi|13377909|gb|AAK20894.1| Rv1808-like protein [Mycobacterium microti]
gi|339294744|gb|AEJ46855.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339298372|gb|AEJ50482.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=410
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/349 (41%), Positives = 185/349 (54%), Gaps = 46/349 (13%)
Query 2 VLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTG 61
+L F LPPEINS RM+AG GSGPL AAA+AW+ LAA+L+++A+S+ S + LT PW G
Sbjct 1 MLDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMG 60
Query 62 PASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLAS 121
P+S++MAAA +PYV W+S A QA+ A QA+ AA +E A AATV P + ANR L S
Sbjct 61 PSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMS 120
Query 122 LIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLA 181
L+A N+ GQNTPAIAATE Y EMWAQD AAM GY AG+ + A+ LAPFS PP
Sbjct 121 LVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGY-AGSSATASQLAPFSEPP------- 172
Query 182 AQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP--LQHASMLFLPVRIL 239
Q + TA+ + A+ + + + L+S LP LQ +
Sbjct 173 -----QTTNPSATAAQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTATATSAS 227
Query 240 TSPITTLASMARESATRLGP---------PAG----------------GLAAANTPNPSG 274
T L S+ A GP P G G+AA P +
Sbjct 228 AGWDTVLQSITTILANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGPKAAA 287
Query 275 AAIPAFKPLGG------RELGAGMSAGLGQAQLVGSMSVPPTWQGSIPI 317
A+ PL G LG G + G+ +A VGS+SVP W + P+
Sbjct 288 GALSPLAPLRGGYIADITPLGGGATGGIARAIYVGSLSVPQGWAEAAPV 336
>gi|308372058|ref|ZP_07427232.2| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308334577|gb|EFP23428.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length=399
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/349 (41%), Positives = 185/349 (54%), Gaps = 46/349 (13%)
Query 2 VLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTG 61
+L F LPPEINS RM+AG GSGPL AAA+AW+ LAA+L+++A+S+ S + LT PW G
Sbjct 1 MLDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMG 60
Query 62 PASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLAS 121
P+S++MAAA +PYV W+S A QA+ A QA+ AA +E A AATV P + ANR L S
Sbjct 61 PSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMS 120
Query 122 LIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLA 181
L+A N+ GQNTPAIAATE Y EMWAQD AAM GY AG+ + A+ LAPFS PP
Sbjct 121 LVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGY-AGSSATASQLAPFSEPP------- 172
Query 182 AQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP--LQHASMLFLPVRIL 239
Q + TA+ + A+ + + + L+S LP LQ +
Sbjct 173 -----QTTNPSATAAQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTATATSAS 227
Query 240 TSPITTLASMARESATRLGP---------PAG----------------GLAAANTPNPSG 274
T L S+ A GP P G G+AA P +
Sbjct 228 AGWDTVLQSITTILANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGPKAAA 287
Query 275 AAIPAFKPLGG------RELGAGMSAGLGQAQLVGSMSVPPTWQGSIPI 317
A+ PL G LG G + G+ +A VGS+SVP W + P+
Sbjct 288 GALSPLAPLRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGWAEAAPV 336
>gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|253799148|ref|YP_003032149.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|254231990|ref|ZP_04925317.1| PPE family protein [Mycobacterium tuberculosis C]
24 more sequence titles
Length=410
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/349 (41%), Positives = 185/349 (54%), Gaps = 46/349 (13%)
Query 2 VLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTG 61
+L F LPPEINS RM+AG GSGPL AAA+AW+ LAA+L+++A+S+ S + LT PW G
Sbjct 1 MLDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMG 60
Query 62 PASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLAS 121
P+S++MAAA +PYV W+S A QA+ A QA+ AA +E A AATV P + ANR L S
Sbjct 61 PSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMS 120
Query 122 LIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLA 181
L+A N+ GQNTPAIAATE Y EMWAQD AAM GY AG+ + A+ LAPFS PP
Sbjct 121 LVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGY-AGSSATASQLAPFSEPP------- 172
Query 182 AQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP--LQHASMLFLPVRIL 239
Q + TA+ + A+ + + + L+S LP LQ +
Sbjct 173 -----QTTNPSATAAQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTATATSAS 227
Query 240 TSPITTLASMARESATRLGP---------PAG----------------GLAAANTPNPSG 274
T L S+ A GP P G G+AA P +
Sbjct 228 AGWDTVLQSITTILANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGPKAAA 287
Query 275 AAIPAFKPLGG------RELGAGMSAGLGQAQLVGSMSVPPTWQGSIPI 317
A+ PL G LG G + G+ +A VGS+SVP W + P+
Sbjct 288 GALSPLAPLRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGWAEAAPV 336
>gi|307084423|ref|ZP_07493536.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|308365983|gb|EFP54834.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
Length=336
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/349 (41%), Positives = 185/349 (54%), Gaps = 46/349 (13%)
Query 2 VLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTG 61
+L F LPPEINS RM+AG GSGPL AAA+AW+ LAA+L+++A+S+ S + LT PW G
Sbjct 1 MLDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMG 60
Query 62 PASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLAS 121
P+S++MAAA +PYV W+S A QA+ A QA+ AA +E A AATV P + ANR L S
Sbjct 61 PSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMS 120
Query 122 LIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLA 181
L+A N+ GQNTPAIAATE Y EMWAQD AAM GY AG+ + A+ LAPFS PP
Sbjct 121 LVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGY-AGSSATASQLAPFSEPP------- 172
Query 182 AQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP--LQHASMLFLPVRIL 239
Q + TA+ + A+ + + + L+S LP LQ +
Sbjct 173 -----QTTNPSATAAQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTATATSAS 227
Query 240 TSPITTLASMARESATRLGP---------PAG----------------GLAAANTPNPSG 274
T L S+ A GP P G G+AA P +
Sbjct 228 AGWDTVLQSITTILANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGPKAAA 287
Query 275 AAIPAFKPLGG------RELGAGMSAGLGQAQLVGSMSVPPTWQGSIPI 317
A+ PL G LG G + G+ +A VGS+SVP W + P+
Sbjct 288 GALSPLAPLRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGWAEAAPV 336
>gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|121637710|ref|YP_977933.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990194|ref|YP_002644881.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
29 more sequence titles
Length=409
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/348 (41%), Positives = 184/348 (53%), Gaps = 46/348 (13%)
Query 3 LGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGP 62
+ F LPPEINS RM+AG GSGPL AAA+AW+ LAA+L+++A+S+ S + LT PW GP
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60
Query 63 ASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASL 122
+S++MAAA +PYV W+S A QA+ A QA+ AA +E A AATV P + ANR L SL
Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120
Query 123 IAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAA 182
+A N+ GQNTPAIAATE Y EMWAQD AAM GY AG+ + A+ LAPFS PP
Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGY-AGSSATASQLAPFSEPP-------- 171
Query 183 QVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP--LQHASMLFLPVRILT 240
Q + TA+ + A+ + + + L+S LP LQ +
Sbjct 172 ----QTTNPSATAAQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTATATSASA 227
Query 241 SPITTLASMARESATRLGP---------PAG----------------GLAAANTPNPSGA 275
T L S+ A GP P G G+AA P +
Sbjct 228 GWDTVLQSITTILANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGPKAAAG 287
Query 276 AIPAFKPLGG------RELGAGMSAGLGQAQLVGSMSVPPTWQGSIPI 317
A+ PL G LG G + G+ +A VGS+SVP W + P+
Sbjct 288 ALSPLAPLRGGYIADITPLGGGATGGIARAIYVGSLSVPQGWAEAAPV 335
>gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661614|ref|YP_001283137.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148823021|ref|YP_001287775.1| PPE family protein [Mycobacterium tuberculosis F11]
9 more sequence titles
Length=409
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/348 (41%), Positives = 184/348 (53%), Gaps = 46/348 (13%)
Query 3 LGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGP 62
+ F LPPEINS RM+AG GSGPL AAA+AW+ LAA+L+++A+S+ S + LT PW GP
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60
Query 63 ASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASL 122
+S++MAAA +PYV W+S A QA+ A QA+ AA +E A AATV P + ANR L SL
Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120
Query 123 IAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAA 182
+A N+ GQNTPAIAATE Y EMWAQD AAM GY AG+ + A+ LAPFS PP
Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGY-AGSSATASQLAPFSEPP-------- 171
Query 183 QVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP--LQHASMLFLPVRILT 240
Q + TA+ + A+ + + + L+S LP LQ +
Sbjct 172 ----QTTNPSATAAQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTATATSASA 227
Query 241 SPITTLASMARESATRLGP---------PAG----------------GLAAANTPNPSGA 275
T L S+ A GP P G G+AA P +
Sbjct 228 GWDTVLQSITTILANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGPKAAAG 287
Query 276 AIPAFKPLGG------RELGAGMSAGLGQAQLVGSMSVPPTWQGSIPI 317
A+ PL G LG G + G+ +A VGS+SVP W + P+
Sbjct 288 ALSPLAPLRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGWAEAAPV 335
>gi|240171832|ref|ZP_04750491.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=1134
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/187 (60%), Positives = 138/187 (74%), Gaps = 0/187 (0%)
Query 5 FSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGPAS 64
FS PPEINSARMFAGAGSGP+ AA+AW+ LA +L +A+S SV + G W GPA+
Sbjct 3 FSVSPPEINSARMFAGAGSGPMLQAATAWDALANELRTAAASVGSVTTGIALGSWQGPAA 62
Query 65 MSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASLIA 124
+MAAAA+PY+GWL T A+QA+ AA QA A +AFEAALAA VHP + ANR L SL+
Sbjct 63 AAMAAAAAPYLGWLQTAAAQAEQAAAQASTAVSAFEAALAAIVHPGCIAANRSRLLSLVV 122
Query 125 ANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAAQV 184
+N+LGQN PAIA+ E +Y +MWAQDVAAM GYH+GA VAA L PF+ P SLAG +++
Sbjct 123 SNLLGQNAPAIASAEANYEQMWAQDVAAMFGYHSGASGVAAALTPFTRPLQSLAGQVSRL 182
Query 185 GTQVAGM 191
G VAG+
Sbjct 183 GGAVAGV 189
>gi|118466099|ref|YP_881935.1| PPE family protein [Mycobacterium avium 104]
gi|118167386|gb|ABK68283.1| ppe family protein [Mycobacterium avium 104]
Length=461
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/338 (41%), Positives = 187/338 (56%), Gaps = 36/338 (10%)
Query 3 LGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGP 62
+ F+ LPPE+NSARM+AG GSGP+ AAA AW+ LAA L ++A S+++ + ALT+GPW GP
Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDELAATLHSTADSYQAEITALTSGPWVGP 60
Query 63 ASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASL 122
++ +M AA +PY+ W+ T +QA+ A ARAAA A+E A A TV P VTANR LA L
Sbjct 61 SAAAMIAAITPYLTWMRTTGAQAEETANNARAAAFAYETAFAETVPPPVVTANRTLLAQL 120
Query 123 IAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAA 182
+A N+LGQNTPAIA TE +Y EMWA+D AAM +AGA + A L PF+ P + A
Sbjct 121 VATNILGQNTPAIATTEAEYAEMWARDAAAMY-GYAGAAAAATRLTPFTQPDPTTNSGAD 179
Query 183 QVGTQVAGMATTASAAVTPVVEGAMASVPTVMS---------GMQSLVSQLPLQHASMLF 233
Q AT A + V + ++VP +++ G S+ L L+ +
Sbjct 180 QSQAVSKAAATAAGSTRNTVTQQPFSAVPNMLNNLAVSPNALGDPSVTDLLGLESDLIAI 239
Query 234 LPVRILTSPITTLASMARESATRLGPP---AGGLAAANT-----------PNPSGAAIP- 278
L +P + + + + P AG L +T P P A+P
Sbjct 240 F----LDAPASVVGMGVDAPSATIALPFDIAGALTGFHTDDIVSGWAGVQPWPGTGAVPP 295
Query 279 -----AFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTW 311
P GG G SAGLGQA+ VG++SVPPTW
Sbjct 296 SPFPVITNPAGG--FGTLASAGLGQAKTVGTLSVPPTW 331
>gi|212595976|gb|ACJ35541.1| PPE16 [Mycobacterium avium subsp. avium]
Length=392
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/338 (41%), Positives = 187/338 (56%), Gaps = 36/338 (10%)
Query 3 LGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGP 62
+ F+ LPPE+NSARM+AG GSGP+ AAA AW+ LAA L ++A S+++ + ALT+GPW GP
Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDELAATLHSTADSYQAEITALTSGPWVGP 60
Query 63 ASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASL 122
++ +M AA +PY+ W+ T +QA+ A ARAAA A+E A A TV P VTANR LA L
Sbjct 61 SAAAMIAAITPYLTWMRTTGAQAEETANNARAAAFAYETAFAETVPPPVVTANRTLLAQL 120
Query 123 IAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAA 182
+A N+LGQNTPAIA TE +Y EMWA+D AAM +AGA + A L PF+ P + A
Sbjct 121 VATNILGQNTPAIATTEAEYAEMWARDAAAMY-GYAGAAAAATRLTPFTQPDPTTNSGAD 179
Query 183 QVGTQVAGMATTASAAVTPVVEGAMASVPTVMS---------GMQSLVSQLPLQHASMLF 233
Q AT A + V + ++VP +++ G S+ L L+ +
Sbjct 180 QSQAVSKAAATAAGSTRNTVTQQPFSAVPNMLNNLAVSPNALGDPSVTDLLGLESDLIAI 239
Query 234 LPVRILTSPITTLASMARESATRLGPP---AGGLAAANT-----------PNPSGAAIP- 278
L +P + + + + P AG L +T P P A+P
Sbjct 240 F----LDAPASVVGMGVDAPSATIALPFDIAGALTGFHTDDIVSGWAGVQPWPGTGAVPP 295
Query 279 -----AFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTW 311
P GG G SAGLGQA+ VG++SVPPTW
Sbjct 296 SPFPVITNPAGG--FGTLASAGLGQAKTVGTLSVPPTW 331
>gi|344221312|gb|AEN01943.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=394
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/336 (39%), Positives = 170/336 (51%), Gaps = 34/336 (10%)
Query 2 VLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTG 61
++ F LPPEINSARM+AG GS L AAA W+ +A+DL+++AS+F+SV+ LTTG W G
Sbjct 1 MVDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 60
Query 62 PASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLAS 121
++ M AAASPYV W+S A QA+L A Q R AA A+E A TV P + NR L
Sbjct 61 SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 120
Query 122 LIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLA 181
LIA N+LGQNTPAIA E +Y EMWAQD AAM GY A A + L PF P L
Sbjct 121 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAP-----LI 175
Query 182 AQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGM-QSLVSQLPLQHASMLFLPVRILT 240
G + A T M +VP + + Q S P S L+ +
Sbjct 176 TNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHL 235
Query 241 SPITTLASMARESATRLGPPAGGLAAANTPNPSGAAI----PAFKPLGGRELG------- 289
SP++ + SMA + G++ NT + + A E G
Sbjct 236 SPLSNIVSMANNHMSMTN---SGVSMTNTLHSMLKGLAPAAAAQAVQTAAENGVWAMSSL 292
Query 290 --------------AGMSAGLGQAQLVGSMSVPPTW 311
AG++A LG+A VGS+SVPP W
Sbjct 293 GSQLGSSLGSSGLGAGVAANLGRAASVGSLSVPPAW 328
>gi|336457435|gb|EGO36444.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=461
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/338 (41%), Positives = 186/338 (56%), Gaps = 36/338 (10%)
Query 3 LGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGP 62
+ F+ LPPE+NSARM+AG GSGP+ AAA AW+ LAA L ++A S+++ + ALT+GPW GP
Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDELAATLHSTADSYQAEITALTSGPWVGP 60
Query 63 ASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASL 122
++ +M AA +PY+ W+ T +QA+ A ARAAA A+E A A TV P VTANR LA L
Sbjct 61 SAAAMIAAITPYLTWMRTTGAQAEETANNARAAAFAYETAFAETVPPPVVTANRTLLAQL 120
Query 123 IAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAA 182
+A N+LGQNTPAIA TE +Y EMWA+D AAM +AGA + A L PF+ P + A
Sbjct 121 VATNILGQNTPAIATTEAEYAEMWARDAAAMY-GYAGAAAAATRLTPFTQPDPTTNSGAD 179
Query 183 QVGTQVAGMATTASAAVTPVVEGAMASVPTVMS---------GMQSLVSQLPLQHASMLF 233
Q AT A + V + ++VP +++ G S+ L L+ +
Sbjct 180 QSQAVSKAAATAAGSTRNTVTQQPFSAVPNMLNNLALSPNALGDPSVTDLLGLESDLIAI 239
Query 234 LPVRILTSPITTLASMARESATRLGPP---AGGLAAANT-----------PNPSGAAIP- 278
L +P + + + + P AG L +T P P A+P
Sbjct 240 F----LDAPASVVGMGVDAPSATIALPFDIAGALTGFHTDDIVSGWAGVQPWPGTGAVPP 295
Query 279 -----AFKPLGGRELGAGMSAGLGQAQLVGSMSVPPTW 311
P GG G SAGLGQA VG++SVPPTW
Sbjct 296 SPFPVITNPAGG--FGTLASAGLGQANTVGTLSVPPTW 331
>gi|240169713|ref|ZP_04748372.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=445
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/169 (60%), Positives = 127/169 (76%), Gaps = 2/169 (1%)
Query 5 FSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGPAS 64
F+ LPPE+NS RM+AG G GP+ AAA+AW+GLA+DL ++A + +SV++ LT+G W GPAS
Sbjct 3 FAMLPPEVNSGRMYAGPGPGPMLAAAAAWDGLASDLDSAADACQSVVSQLTSG-WLGPAS 61
Query 65 MSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASLIA 124
SMA AAS Y+ WL T A QA+ A QA AAATA+E A A TV P+ + ANR LA+L+A
Sbjct 62 TSMATAASGYLAWLRTSAGQAEQTARQAMAAATAYEEAFATTVPPSVIAANRAQLAALMA 121
Query 125 ANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLP 173
N+LGQNTPAIAATE DY EMWAQD AAM GY + + + AA L PF+ P
Sbjct 122 TNLLGQNTPAIAATEADYAEMWAQDAAAMYGYAS-SSAAAAALTPFTPP 169
>gi|240171260|ref|ZP_04749919.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=472
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 144/353 (41%), Positives = 191/353 (55%), Gaps = 31/353 (8%)
Query 5 FSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTGPAS 64
F+ LPPEINS RM+AG GSGP+ AA AW+ LAA L+++A+S+ SV+ ALT W GP+S
Sbjct 3 FALLPPEINSGRMYAGPGSGPMLTAAEAWDALAAQLYSTAASYSSVITALT-ATWQGPSS 61
Query 65 MSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLASLIA 124
+SMA AA+PY+ W S A+Q++ A QARAAA A+E AA V P + ANR LASL+A
Sbjct 62 VSMATAAAPYMAWTSATAAQSEQTAAQARAAAVAYETTFAAMVPPPVIAANRSELASLVA 121
Query 125 ANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVS------LA 178
N+ GQNTPAIAA E Y +MWAQD AM Y AG + A TL PF+ P + L
Sbjct 122 TNIFGQNTPAIAANEAQYAQMWAQDATAMNNY-AGQSAAATTLTPFAAPAATTSPGGLLG 180
Query 179 GLAAQVG---TQVAGMATTASAAVTPVVEGAMASVPTVMS----------------GMQS 219
LAA V TQ+ T A + A+ S T+++ GMQ+
Sbjct 181 QLAAIVNTYITQIVSSTQTQIANFFNAIPTALLSFTTIVTGPNPISGLLTAAQDFAGMQN 240
Query 220 LVSQL-PLQHASMLFLPVR-ILTSPITTLASMARESATRLGPPAGGLAAANTPNPSGAAI 277
+ S L+ L LPV I + I L + AG A + A +
Sbjct 241 INSLTGDLELIPKLILPVNDIFITIIMGLVFQTKYLNGLASTAAGAAAGNGGGSVLAAGL 300
Query 278 PAFKPLGGRE-LGAGMSAGLGQAQLVGSMSVPPTWQGSIP-ISMASSAMSGLG 328
+ L G LG ++A +G A LVG M+VPP+W + P I +S +SG G
Sbjct 301 GSGPNLAGSAGLGGAVAADVGHAGLVGGMAVPPSWATATPAIRTVASVLSGAG 353
>gi|118464876|ref|YP_882114.1| PPE family protein [Mycobacterium avium 104]
gi|118166163|gb|ABK67060.1| ppe family protein [Mycobacterium avium 104]
Length=421
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/177 (62%), Positives = 135/177 (77%), Gaps = 1/177 (0%)
Query 2 VLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTG 61
+ F LPPEINS RM+AG GSGPL AAA+AW+ +AA+L +AS + SV+A LT+GPW G
Sbjct 1 MFDFGALPPEINSGRMYAGPGSGPLMAAAAAWDEVAAELGIAASGYHSVIAELTSGPWVG 60
Query 62 PASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLAS 121
PAS+SM +A +PYVGWLS VA+QA+ A Q RAAA AFEAA A TV P + ANRV LA+
Sbjct 61 PASLSMVSAITPYVGWLSAVAAQAEETASQGRAAAAAFEAAFAMTVPPPVIAANRVLLAT 120
Query 122 LIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLA 178
L+A N GQNTPAIAATE Y+EMWAQD AAM GY A +++ A+TL+PF+ PP + A
Sbjct 121 LVATNFFGQNTPAIAATEAQYMEMWAQDAAAMYGYAAASQT-ASTLSPFAAPPNTTA 176
>gi|212596073|gb|ACJ35549.1| PPE24 [Mycobacterium avium subsp. avium]
Length=421
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/177 (62%), Positives = 135/177 (77%), Gaps = 1/177 (0%)
Query 2 VLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWTG 61
+ F LPPEINS RM+AG GSGPL AAA+AW+ +AA+L +AS + SV+A LT+GPW G
Sbjct 1 MFDFGALPPEINSGRMYAGPGSGPLMAAAAAWDEVAAELGIAASGYHSVIAELTSGPWVG 60
Query 62 PASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLAS 121
PAS+SM +A +PYVGWLS VA+QA+ A Q RAAA AFEAA A TV P + ANRV LA+
Sbjct 61 PASLSMVSAITPYVGWLSAVAAQAEETASQGRAAAAAFEAAFAMTVPPPVIAANRVLLAT 120
Query 122 LIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLA 178
L+A N GQNTPAIAATE Y+EMWAQD AAM GY A +++ A+TL+PF+ PP + A
Sbjct 121 LVATNFFGQNTPAIAATEAQYMEMWAQDAAAMYGYAAASQT-ASTLSPFAAPPNTTA 176
Lambda K H
0.315 0.126 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 768123887500
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40