BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3127
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
gi|323718214|gb|EGB27394.1| hypothetical protein TMMG_02261 [Myc... 699 0.0
gi|15842701|ref|NP_337738.1| hypothetical protein MT3212 [Mycoba... 698 0.0
gi|15610264|ref|NP_217643.1| hypothetical protein Rv3127 [Mycoba... 697 0.0
gi|31794302|ref|NP_856795.1| hypothetical protein Mb3150 [Mycoba... 694 0.0
gi|240168625|ref|ZP_04747284.1| hypothetical protein MkanA1_0489... 492 4e-137
gi|183981537|ref|YP_001849828.1| hypothetical protein MMAR_1522 ... 472 5e-131
gi|118617908|ref|YP_906240.1| hypothetical protein MUL_2417 [Myc... 466 2e-129
gi|296169079|ref|ZP_06850739.1| conserved hypothetical protein [... 430 2e-118
gi|15841519|ref|NP_336556.1| hypothetical protein MT2091 [Mycoba... 355 5e-96
gi|15609169|ref|NP_216548.1| hypothetical protein Rv2032 [Mycoba... 354 9e-96
gi|339298583|gb|AEJ50693.1| hypothetical protein CCDC5180_1856 [... 354 1e-95
gi|31793215|ref|NP_855708.1| hypothetical protein Mb2058 [Mycoba... 351 9e-95
gi|339632072|ref|YP_004723714.1| hypothetical protein MAF_20470 ... 351 1e-94
gi|289443530|ref|ZP_06433274.1| hypothetical protein TBLG_00632 ... 351 1e-94
gi|340627043|ref|YP_004745495.1| hypothetical protein MCAN_20551... 351 1e-94
gi|108800376|ref|YP_640573.1| hypothetical protein Mmcs_3410 [My... 343 2e-92
gi|126435999|ref|YP_001071690.1| hypothetical protein Mjls_3421 ... 342 6e-92
gi|306789159|ref|ZP_07427481.1| hypothetical protein acg [Mycoba... 338 9e-91
gi|169630982|ref|YP_001704631.1| hypothetical protein MAB_3903 [... 331 1e-88
gi|118469419|ref|YP_888240.1| hypothetical protein MSMEG_3952 [M... 323 2e-86
gi|333989875|ref|YP_004522489.1| hypothetical protein JDM601_123... 321 8e-86
gi|120402394|ref|YP_952223.1| hypothetical protein Mvan_1383 [My... 318 1e-84
gi|296169103|ref|ZP_06850762.1| conserved hypothetical protein [... 317 2e-84
gi|41407841|ref|NP_960677.1| hypothetical protein MAP1743c [Myco... 315 5e-84
gi|296170987|ref|ZP_06852482.1| conserved hypothetical protein [... 310 2e-82
gi|240171509|ref|ZP_04750168.1| hypothetical protein MkanA1_1950... 310 2e-82
gi|183983470|ref|YP_001851761.1| hypothetical protein MMAR_3487 ... 310 2e-82
gi|183983458|ref|YP_001851749.1| hypothetical protein MMAR_3475 ... 309 3e-82
gi|254822192|ref|ZP_05227193.1| hypothetical protein MintA_19824... 308 1e-81
gi|108801092|ref|YP_641289.1| hypothetical protein Mmcs_4128 [My... 308 1e-81
gi|296169087|ref|ZP_06850746.1| conserved hypothetical protein [... 306 3e-81
gi|118464897|ref|YP_881697.1| hypothetical protein MAV_2505 [Myc... 303 4e-80
gi|254775162|ref|ZP_05216678.1| hypothetical protein MaviaA2_108... 302 6e-80
gi|296170572|ref|ZP_06852156.1| conserved hypothetical protein [... 300 2e-79
gi|333990936|ref|YP_004523550.1| hypothetical protein JDM601_229... 297 2e-78
gi|145224427|ref|YP_001135105.1| hypothetical protein Mflv_3845 ... 297 2e-78
gi|108798048|ref|YP_638245.1| hypothetical protein Mmcs_1075 [My... 295 6e-78
gi|315444760|ref|YP_004077639.1| hypothetical protein Mspyr1_318... 294 1e-77
gi|254774704|ref|ZP_05216220.1| hypothetical protein MaviaA2_085... 285 7e-75
gi|118472552|ref|YP_889492.1| hypothetical protein MSMEG_5246 [M... 283 4e-74
gi|120403538|ref|YP_953367.1| hypothetical protein Mvan_2550 [My... 282 5e-74
gi|240171520|ref|ZP_04750179.1| hypothetical protein MkanA1_1955... 280 3e-73
gi|145225570|ref|YP_001136248.1| hypothetical protein Mflv_4994 ... 273 2e-71
gi|118468538|ref|YP_888232.1| hypothetical protein MSMEG_3943 [M... 252 7e-65
gi|111017049|ref|YP_700021.1| hypothetical protein RHA1_ro00027 ... 233 5e-59
gi|111017053|ref|YP_700025.1| hypothetical protein RHA1_ro00031 ... 230 2e-58
gi|226359602|ref|YP_002777380.1| hypothetical protein ROP_01880 ... 225 1e-56
gi|145226774|gb|ABP48140.1| hypothetical protein [Rhodococcus sp... 212 7e-53
gi|54024736|ref|YP_118978.1| hypothetical protein nfa27670 [Noca... 201 2e-49
gi|226306909|ref|YP_002766869.1| hypothetical protein RER_34220 ... 189 7e-46
>gi|323718214|gb|EGB27394.1| hypothetical protein TMMG_02261 [Mycobacterium tuberculosis CDC1551A]
gi|339295958|gb|AEJ48069.1| hypothetical protein CCDC5079_2879 [Mycobacterium tuberculosis
CCDC5079]
gi|339299568|gb|AEJ51678.1| hypothetical protein CCDC5180_2841 [Mycobacterium tuberculosis
CCDC5180]
Length=359
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/344 (100%), Positives = 344/344 (100%), Gaps = 0/344 (0%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA
Sbjct 16 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 75
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL
Sbjct 76 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 135
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW
Sbjct 136 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 195
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR
Sbjct 196 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 255
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP
Sbjct 256 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 315
Query 301 PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP 344
PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP
Sbjct 316 PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP 359
>gi|15842701|ref|NP_337738.1| hypothetical protein MT3212 [Mycobacterium tuberculosis CDC1551]
gi|254233751|ref|ZP_04927076.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254365754|ref|ZP_04981799.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
21 more sequence titles
Length=348
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/344 (100%), Positives = 344/344 (100%), Gaps = 0/344 (0%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA
Sbjct 5 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 64
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL
Sbjct 65 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 124
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW
Sbjct 125 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 184
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR
Sbjct 185 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 244
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP
Sbjct 245 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 304
Query 301 PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP 344
PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP
Sbjct 305 PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP 348
>gi|15610264|ref|NP_217643.1| hypothetical protein Rv3127 [Mycobacterium tuberculosis H37Rv]
gi|148662981|ref|YP_001284504.1| hypothetical protein MRA_3159 [Mycobacterium tuberculosis H37Ra]
gi|148824320|ref|YP_001289074.1| hypothetical protein TBFG_13147 [Mycobacterium tuberculosis F11]
47 more sequence titles
Length=344
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/344 (99%), Positives = 344/344 (100%), Gaps = 0/344 (0%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
+LKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA
Sbjct 1 MLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL
Sbjct 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW
Sbjct 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR
Sbjct 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP
Sbjct 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
Query 301 PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP 344
PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP
Sbjct 301 PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP 344
>gi|31794302|ref|NP_856795.1| hypothetical protein Mb3150 [Mycobacterium bovis AF2122/97]
gi|121639009|ref|YP_979233.1| hypothetical protein BCG_3149 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991501|ref|YP_002646190.1| hypothetical protein JTY_3144 [Mycobacterium bovis BCG str. Tokyo
172]
gi|31619898|emb|CAD95242.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121494657|emb|CAL73138.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224774616|dbj|BAH27422.1| hypothetical protein JTY_3144 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341603048|emb|CCC65726.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=344
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/344 (99%), Positives = 343/344 (99%), Gaps = 0/344 (0%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
+LKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA
Sbjct 1 MLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVE SPIDHVTAGQRNRAQAILQRRTDRL
Sbjct 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVECSPIDHVTAGQRNRAQAILQRRTDRL 120
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW
Sbjct 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR
Sbjct 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP
Sbjct 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
Query 301 PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP 344
PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP
Sbjct 301 PLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP 344
>gi|240168625|ref|ZP_04747284.1| hypothetical protein MkanA1_04890 [Mycobacterium kansasii ATCC
12478]
Length=338
Score = 492 bits (1266), Expect = 4e-137, Method: Compositional matrix adjust.
Identities = 238/327 (73%), Positives = 268/327 (82%), Gaps = 0/327 (0%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
VL NAVLLACRAPSVHNSQPWRWV E + VHLFV+RHR V ATDHSGR+A+ISCGA
Sbjct 12 VLANAVLLACRAPSVHNSQPWRWVVERNANVYAVHLFVDRHRIVRATDHSGREALISCGA 71
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
LDHLR+AM AA WQ +I+RFP P+ PD LAT+EF P DHVTA Q+ RA+AILQRRTDRL
Sbjct 72 ALDHLRVAMAAAQWQPSISRFPTPSHPDHLATIEFRPTDHVTAAQQQRAEAILQRRTDRL 131
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PFD P YW LFEPALR AVD D A LDV++D+QR LV ASQ SE LRRDDP YHAEL+W
Sbjct 132 PFDRPSYWDLFEPALRAAVDDDDATLDVLADEQRPLLVQASQYSEALRRDDPSYHAELDW 191
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WTSPF LA GVPP LASD ERLRVD+GRDFPVRS+ RR ++ D SK+LVLSTP DTR
Sbjct 192 WTSPFALAEGVPPSALASDTERLRVDVGRDFPVRSHHQRRPQITADWSKILVLSTPEDTR 251
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
D LRCGE LST+LLECTMAGMATCTL+HLIESS+SRD+VRGL RGEPQ L+RVGI P
Sbjct 252 LDVLRCGEALSTVLLECTMAGMATCTLSHLIESSESRDLVRGLIGHRGEPQVLVRVGITP 311
Query 301 PLAAVPAPTPRRPLDSVLQIRQTPEKG 327
P+ P PTPRRPL++VL+IR+ PEKG
Sbjct 312 PIDDAPPPTPRRPLNTVLEIREKPEKG 338
>gi|183981537|ref|YP_001849828.1| hypothetical protein MMAR_1522 [Mycobacterium marinum M]
gi|183174863|gb|ACC39973.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=333
Score = 472 bits (1214), Expect = 5e-131, Method: Compositional matrix adjust.
Identities = 232/331 (71%), Positives = 268/331 (81%), Gaps = 4/331 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAE----SGSEHTTVHLFVNRHRTVPATDHSGRQAII 56
VLK AVLLACRAPSVHNSQPWRWVA+ SGSE VHLF +R RTVPATDHSGR+ +I
Sbjct 3 VLKTAVLLACRAPSVHNSQPWRWVADRDRDSGSEVVAVHLFADRGRTVPATDHSGRETLI 62
Query 57 SCGAVLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRR 116
SCGAVLDHL +AMTAA WQ +ITRFP P+ P+ LATV+FSPI+ VT + RA++ILQRR
Sbjct 63 SCGAVLDHLGVAMTAAGWQPSITRFPTPDDPNHLATVDFSPIEEVTETELKRAESILQRR 122
Query 117 TDRLPFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHA 176
TDRL FD P YW LFE LR+ +D D+AMLDV++D+QR +LV AS LS LRRDD YHA
Sbjct 123 TDRLAFDRPRYWDLFEGVLRNTIDNDIAMLDVLTDEQRPQLVQASHLSAALRRDDLSYHA 182
Query 177 ELEWWTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTP 236
EL+WWTSPFVL GVPP LASD ER RVDL RDFPVRS+Q+RR E+ D SK+LVLSTP
Sbjct 183 ELDWWTSPFVLTDGVPPLALASDTERQRVDLSRDFPVRSHQDRRPEITSDWSKILVLSTP 242
Query 237 SDTRADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRV 296
DTRAD LRCGEVLS++LLECTMAGMATCTLTHLIES++SRDIV L +RG+PQ LIR
Sbjct 243 GDTRADVLRCGEVLSSVLLECTMAGMATCTLTHLIESNESRDIVADLIGRRGQPQVLIRA 302
Query 297 GIAPPLAAVPAPTPRRPLDSVLQIRQTPEKG 327
GI P + +PAPTPRR LDS+ ++RQ PEKG
Sbjct 303 GITPLIEEIPAPTPRRGLDSIFEVRQKPEKG 333
>gi|118617908|ref|YP_906240.1| hypothetical protein MUL_2417 [Mycobacterium ulcerans Agy99]
gi|118570018|gb|ABL04769.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=335
Score = 466 bits (1200), Expect = 2e-129, Method: Compositional matrix adjust.
Identities = 230/331 (70%), Positives = 266/331 (81%), Gaps = 4/331 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAE----SGSEHTTVHLFVNRHRTVPATDHSGRQAII 56
VLK AVLLACRAPSVHNSQPWRWVA+ SGSE VHLF +R RTVPATDHSGR+ +I
Sbjct 5 VLKTAVLLACRAPSVHNSQPWRWVADRDRDSGSEVVAVHLFADRGRTVPATDHSGRETLI 64
Query 57 SCGAVLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRR 116
SCGAVLDHL +AMTAA WQ +ITRFP P+ P+ LATV+F PI+ VT + RA++ILQRR
Sbjct 65 SCGAVLDHLGVAMTAAGWQPSITRFPTPDDPNHLATVDFRPIEEVTETELKRAESILQRR 124
Query 117 TDRLPFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHA 176
TDRL FD YW LFE LR+ +D D+AMLDV++D+QR +LV AS LS LRRDD YHA
Sbjct 125 TDRLAFDRRRYWDLFEGVLRNTIDNDIAMLDVLTDEQRPQLVQASHLSAALRRDDLSYHA 184
Query 177 ELEWWTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTP 236
EL+WWTSPFVL GVPP LASD ER RVDL RDFPVRS+Q+RR E+ D SK+LVLSTP
Sbjct 185 ELDWWTSPFVLTDGVPPLALASDTERQRVDLSRDFPVRSHQDRRPEITSDWSKILVLSTP 244
Query 237 SDTRADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRV 296
DTRAD LRCGEVLS++LLECTMAGMATCTLTHLIES++SRDIV L +RG+PQ LIR
Sbjct 245 GDTRADVLRCGEVLSSVLLECTMAGMATCTLTHLIESNESRDIVADLIGRRGQPQVLIRA 304
Query 297 GIAPPLAAVPAPTPRRPLDSVLQIRQTPEKG 327
GI P + +PAPTPRR LDS+ ++RQ PEKG
Sbjct 305 GITPLIEEIPAPTPRRGLDSIFEVRQKPEKG 335
>gi|296169079|ref|ZP_06850739.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896270|gb|EFG75931.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=326
Score = 430 bits (1105), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 217/321 (68%), Positives = 244/321 (77%), Gaps = 4/321 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
VLK AVLLACRAPSVHNSQPWRWVAE G+ + LFV+RHR +PATDHSGR+ I+SCGA
Sbjct 10 VLKRAVLLACRAPSVHNSQPWRWVAEGGA----LRLFVDRHRAIPATDHSGREVILSCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDHL +AMTAA W + RFP P PDQLA+V FSP +HVT Q A+AILQR TDRL
Sbjct 66 VLDHLCVAMTAAGWDPKVVRFPDPGDPDQLASVTFSPSEHVTESQHRLAEAILQRHTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
P P YW LFEPALR D LDV+ DD R LV ASQL+E LRRDD YYHAEL+W
Sbjct 126 PLGRPTYWDLFEPALRGTFDDAQVALDVLPDDARPLLVEASQLTEELRRDDYYYHAELDW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WTS FVLA G+PP LASD E RVD+ R FPVRS+ +RR E+ D +K+LVLSTP D R
Sbjct 186 WTSSFVLAEGMPPSALASDKESWRVDVARSFPVRSHADRRGEVKVDWAKILVLSTPDDAR 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
AD LRCGEVLST+LLE T+AGMATC LTHLIE +SR+IVR L RGEPQ L+RVGIAP
Sbjct 246 ADVLRCGEVLSTVLLESTVAGMATCPLTHLIELEESREIVRALIGGRGEPQVLVRVGIAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
PL +PA TPRRPL VLQIR
Sbjct 306 PLEHLPAATPRRPLGDVLQIR 326
>gi|15841519|ref|NP_336556.1| hypothetical protein MT2091 [Mycobacterium tuberculosis CDC1551]
gi|13881763|gb|AAK46370.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=333
Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 182/321 (57%), Positives = 221/321 (69%), Gaps = 4/321 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+K+AV LACRAPS+HNSQPWRW+AE +HT V LF+++ R + ATDHSGR+A++ CGA
Sbjct 12 VIKSAVQLACRAPSLHNSQPWRWIAE---DHT-VALFLDKDRVLYATDHSGREALLGCGA 67
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDH R+AM AA AN+ RFP PN P LA+++FSP D VT G R RA AIL RRTDRL
Sbjct 68 VLDHFRVAMAAAGTTANVERFPNPNDPLHLASIDFSPADFVTEGHRLRADAILLRRTDRL 127
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF P W L E LR V D +DV++DD R L AS+L+E LR D YHAEL W
Sbjct 128 PFAEPPDWDLVESQLRTTVTADTVRIDVIADDMRPELAAASKLTESLRLYDSSYHAELFW 187
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT F + G+P +L S AE RV GRDFPV + +RR E DRSKVLVLST + R
Sbjct 188 WTGAFETSEGIPHSSLVSAAESDRVTFGRDFPVVANTDRRPEFGHDRSKVLVLSTYDNER 247
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
A LRCGE+LS +LL+ TMAG+ATCTLTH+ E SRD+V L Q PQAL+RVG+AP
Sbjct 248 ASLLRCGEMLSAVLLDATMAGLATCTLTHITELHASRDLVAALIGQPATPQALVRVGLAP 307
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
+ P TPRRP+D V +R
Sbjct 308 EMEEPPPATPRRPIDEVFHVR 328
>gi|15609169|ref|NP_216548.1| hypothetical protein Rv2032 [Mycobacterium tuberculosis H37Rv]
gi|148661846|ref|YP_001283369.1| hypothetical protein MRA_2047 [Mycobacterium tuberculosis H37Ra]
gi|148823248|ref|YP_001288002.1| hypothetical protein TBFG_12069 [Mycobacterium tuberculosis F11]
61 more sequence titles
Length=331
Score = 354 bits (909), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 182/321 (57%), Positives = 221/321 (69%), Gaps = 4/321 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+K+AV LACRAPS+HNSQPWRW+AE +HT V LF+++ R + ATDHSGR+A++ CGA
Sbjct 10 VIKSAVQLACRAPSLHNSQPWRWIAE---DHT-VALFLDKDRVLYATDHSGREALLGCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDH R+AM AA AN+ RFP PN P LA+++FSP D VT G R RA AIL RRTDRL
Sbjct 66 VLDHFRVAMAAAGTTANVERFPNPNDPLHLASIDFSPADFVTEGHRLRADAILLRRTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF P W L E LR V D +DV++DD R L AS+L+E LR D YHAEL W
Sbjct 126 PFAEPPDWDLVESQLRTTVTADTVRIDVIADDMRPELAAASKLTESLRLYDSSYHAELFW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT F + G+P +L S AE RV GRDFPV + +RR E DRSKVLVLST + R
Sbjct 186 WTGAFETSEGIPHSSLVSAAESDRVTFGRDFPVVANTDRRPEFGHDRSKVLVLSTYDNER 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
A LRCGE+LS +LL+ TMAG+ATCTLTH+ E SRD+V L Q PQAL+RVG+AP
Sbjct 246 ASLLRCGEMLSAVLLDATMAGLATCTLTHITELHASRDLVAALIGQPATPQALVRVGLAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
+ P TPRRP+D V +R
Sbjct 306 EMEEPPPATPRRPIDEVFHVR 326
>gi|339298583|gb|AEJ50693.1| hypothetical protein CCDC5180_1856 [Mycobacterium tuberculosis
CCDC5180]
Length=331
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/321 (57%), Positives = 221/321 (69%), Gaps = 4/321 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+K+AV LACRAPS+HNSQPWRW+AE +HT V LF+++ R + ATDHSGR+A++ CGA
Sbjct 10 VIKSAVQLACRAPSLHNSQPWRWIAE---DHT-VALFLDKDRVLYATDHSGREALLGCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDH R+AM AA AN+ RFP PN P LA+++FSP D VT G R RA AIL RRTDRL
Sbjct 66 VLDHFRVAMAAAGTTANVERFPNPNDPLHLASIDFSPADFVTEGHRLRADAILLRRTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF P W L E LR V D +DV++DD R L AS+L+E LR D YHAEL W
Sbjct 126 PFAEPPDWDLVESQLRTTVTADTVRIDVIADDMRPELAAASKLTESLRLYDSSYHAELFW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT F + G+P +L S AE RV GRDFPV + +RR E DRSKVLVLST + R
Sbjct 186 WTGAFETSEGIPHSSLVSAAESDRVTFGRDFPVVANTDRRPEFGHDRSKVLVLSTYDNER 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
A LRCGE+LS +LL+ TMAG+ATCTLTH+ E SRD+V L Q PQAL+RVG+AP
Sbjct 246 ASLLRCGEMLSAVLLDATMAGLATCTLTHITELHASRDLVAALIGQPATPQALVRVGLAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
+ P TPRRP+D V +R
Sbjct 306 EVEEPPPATPRRPIDEVFHVR 326
>gi|31793215|ref|NP_855708.1| hypothetical protein Mb2058 [Mycobacterium bovis AF2122/97]
gi|121637918|ref|YP_978141.1| hypothetical protein BCG_2051 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990412|ref|YP_002645099.1| hypothetical protein Acg [Mycobacterium bovis BCG str. Tokyo
172]
gi|31618807|emb|CAD96911.1| Conserved hypothetical protein Acg [Mycobacterium bovis AF2122/97]
gi|121493565|emb|CAL72039.1| Conserved hypothetical protein Acg [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773525|dbj|BAH26331.1| hypothetical protein Acg [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601955|emb|CCC64629.1| conserved hypothetical protein Acg [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=331
Score = 351 bits (901), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 181/321 (57%), Positives = 220/321 (69%), Gaps = 4/321 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+K+AV LACRAPS+HNSQPWRW+AE +HT V LF+++ R + ATDHSGR+A++ CGA
Sbjct 10 VIKSAVQLACRAPSLHNSQPWRWIAE---DHT-VALFLDKDRVLYATDHSGREALLGCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDH R+AM AA AN+ RFP PN P LA+++FSP D VT G R RA AIL RRTDRL
Sbjct 66 VLDHFRVAMAAAGTTANVERFPNPNDPLHLASIDFSPADFVTEGHRLRADAILLRRTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF P W L E LR V D +DV++DD R L AS+L+E LR D YHAEL W
Sbjct 126 PFAEPPDWDLVESQLRTTVTADTVRIDVIADDMRPELAAASKLTESLRLYDSSYHAELFW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT F + G+P +L S AE RV GRDFPV + +RR E DRSKVLVLST + R
Sbjct 186 WTGAFETSEGIPHSSLVSAAESDRVTFGRDFPVVANTDRRPEFGHDRSKVLVLSTYDNER 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
A LRCGE+LS +LL+ TMAG+ATCTLTH+ E SRD+V L Q PQAL+RVG+AP
Sbjct 246 ASLLRCGEMLSAVLLDATMAGLATCTLTHITELHASRDLVAALIGQPATPQALVRVGLAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
+ P TPRR +D V +R
Sbjct 306 EMEEPPPATPRRLIDEVFHVR 326
>gi|339632072|ref|YP_004723714.1| hypothetical protein MAF_20470 [Mycobacterium africanum GM041182]
gi|339331428|emb|CCC27117.1| conserved hypothetical protein Acg [Mycobacterium africanum GM041182]
Length=331
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 181/321 (57%), Positives = 220/321 (69%), Gaps = 4/321 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+K+AV LACRAPS+HNSQPWRW+AE +HT V LF+++ R + ATDHSGR+A++ CGA
Sbjct 10 VIKSAVQLACRAPSLHNSQPWRWIAE---DHT-VALFLDKDRVLYATDHSGREALLGCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDH R+AM AA AN+ RFP PN P LA+++FSP D VT G R RA AIL RRTDRL
Sbjct 66 VLDHFRVAMAAAGTTANVERFPNPNDPLHLASIDFSPADFVTEGHRLRADAILLRRTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF P W L E LR V D +DV++DD R L AS+L+E LR D HAEL W
Sbjct 126 PFAEPPDWDLVESQLRTTVTADTVRIDVIADDMRPELAAASKLTESLRLYDSSCHAELFW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT F + G+P +L S AE RV GRDFPV + +RR E DRSKVLVLST + R
Sbjct 186 WTGAFETSEGIPHSSLVSAAESDRVTFGRDFPVVANTDRRPEFGHDRSKVLVLSTYDNER 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
A LRCGE+LS +LL+ TMAG+ATCTLTH+ E SRD+V L Q PQAL+RVG+AP
Sbjct 246 ASLLRCGEMLSAVLLDATMAGLATCTLTHITELHASRDLVAALIGQPATPQALVRVGLAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
+ P TPRRP+D V +R
Sbjct 306 EMEEPPPATPRRPIDEVFHVR 326
>gi|289443530|ref|ZP_06433274.1| hypothetical protein TBLG_00632 [Mycobacterium tuberculosis T46]
gi|289570141|ref|ZP_06450368.1| hypothetical protein acg [Mycobacterium tuberculosis T17]
gi|289416449|gb|EFD13689.1| hypothetical protein TBLG_00632 [Mycobacterium tuberculosis T46]
gi|289543895|gb|EFD47543.1| hypothetical protein acg [Mycobacterium tuberculosis T17]
Length=331
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 181/321 (57%), Positives = 220/321 (69%), Gaps = 4/321 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+K+AV LACRAPS+HNSQPWRW+AE +HT V LF+++ R + ATDHSGR+A++ CGA
Sbjct 10 VIKSAVQLACRAPSLHNSQPWRWIAE---DHT-VALFLDKDRVLYATDHSGREALLGCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDH R+AM AA AN+ RFP PN P LA+++FSP D VT G R RA AIL RRTDRL
Sbjct 66 VLDHFRVAMAAAGTTANVERFPNPNDPLHLASIDFSPADFVTEGHRLRADAILLRRTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF P W L E LR V D +DV++DD R L AS+L+E LR D YHAEL
Sbjct 126 PFAEPPDWDLVESQLRTTVTADTVRIDVIADDMRPELAAASKLTESLRLYDSSYHAELFC 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT F + G+P +L S AE RV GRDFPV + +RR E DRSKVLVLST + R
Sbjct 186 WTGAFETSEGIPHSSLVSAAESDRVTFGRDFPVVANTDRRPEFGHDRSKVLVLSTYDNER 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
A LRCGE+LS +LL+ TMAG+ATCTLTH+ E SRD+V L Q PQAL+RVG+AP
Sbjct 246 ASLLRCGEMLSAVLLDATMAGLATCTLTHITELHASRDLVAALIGQPATPQALVRVGLAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
+ P TPRRP+D V +R
Sbjct 306 EMEEPPPATPRRPIDEVFHVR 326
>gi|340627043|ref|YP_004745495.1| hypothetical protein MCAN_20551 [Mycobacterium canettii CIPT
140010059]
gi|340005233|emb|CCC44387.1| conserved hypothetical protein Acg [Mycobacterium canettii CIPT
140010059]
Length=331
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 182/321 (57%), Positives = 219/321 (69%), Gaps = 4/321 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+K AV LACRAPS+HNSQPWRW+AE +HT V LF+++ R + ATDHSGR+A++ CGA
Sbjct 10 VIKRAVQLACRAPSLHNSQPWRWIAE---DHT-VALFLDKDRVLYATDHSGREALLGCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDH R+AM AA AN+ RFP PN P LA+++FSP D VT G R RA AIL RRTDRL
Sbjct 66 VLDHFRVAMAAAGTTANVERFPNPNDPLHLASIDFSPADFVTEGHRLRADAILLRRTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF P W L E L V D LDV++DD R L AS+L+E LR D YHAEL W
Sbjct 126 PFAEPPDWDLVESQLCTTVTADTVRLDVIADDMRPELAAASKLTESLRLYDSSYHAELFW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT F + G+P +L S AE RV GRDFPV + +RR E DRSKVLVLST + R
Sbjct 186 WTGAFETSEGIPHSSLVSAAESDRVTFGRDFPVVANTDRRPEFGHDRSKVLVLSTYDNER 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
A LRCGE+LS +LL+ TMAG+ATCTLTH+ E SRD+V L Q PQAL+RVG+AP
Sbjct 246 ASLLRCGEMLSAVLLDATMAGLATCTLTHITELHASRDLVAALIGQPATPQALVRVGLAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
+ P TPRRP+D V +R
Sbjct 306 EVEEPPPATPRRPIDEVFHVR 326
>gi|108800376|ref|YP_640573.1| hypothetical protein Mmcs_3410 [Mycobacterium sp. MCS]
gi|119869505|ref|YP_939457.1| hypothetical protein Mkms_3473 [Mycobacterium sp. KMS]
gi|108770795|gb|ABG09517.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695594|gb|ABL92667.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=335
Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/323 (55%), Positives = 215/323 (67%), Gaps = 4/323 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
VL A+ LACRAPS+HNSQPWRW+ T V LF + R V +TD SGR+AIISCGA
Sbjct 10 VLVKAIRLACRAPSLHNSQPWRWIVG----ETVVDLFADHRRVVRSTDRSGREAIISCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
LDH R AM A W ++ RFP P + D LA+V F+P VTA QR+RA+AI++RRTDRL
Sbjct 66 ALDHFRTAMAACGWSTDVDRFPDPGERDHLASVTFAPARSVTANQRDRAEAIMRRRTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
P +P W FEP LR +++ +A L V+ D R L AS+L+E RR D YYH EL W
Sbjct 126 PLRAPERWQEFEPTLRRSIEPGMAALVVLDDQSRPILAEASRLTESHRRHDIYYHDELRW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT P GVPP L S+ E+ RVD+GR FPV + NR E+ D +K+LVL+TP DTR
Sbjct 186 WTEPSRPYRGVPPSALVSEEEQGRVDIGRAFPVSGHGNRCPEVRTDEAKILVLTTPGDTR 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
ADALRCGE LST+LL CT AG+ TC LTH+ E +SR + L RG PQ LIRVG AP
Sbjct 246 ADALRCGETLSTVLLACTAAGLGTCALTHVTELPESRATIENLIGDRGVPQVLIRVGTAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIRQT 323
+ APTPR PL V+QIR++
Sbjct 306 TIEENRAPTPRLPLSDVMQIRRS 328
>gi|126435999|ref|YP_001071690.1| hypothetical protein Mjls_3421 [Mycobacterium sp. JLS]
gi|126235799|gb|ABN99199.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=335
Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 175/323 (55%), Positives = 215/323 (67%), Gaps = 4/323 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
VL A+ LACRAPS+HNSQPWRW+ T V LF + R V +TD SGR+AIISCGA
Sbjct 10 VLVKAIRLACRAPSLHNSQPWRWIVG----ETVVDLFADHRRVVRSTDRSGREAIISCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
LDH R AM A W ++ RFP P + D LA+V F+P VTA QR+RA+AI++RRTDRL
Sbjct 66 ALDHFRTAMAACGWSTDVDRFPDPGERDHLASVTFAPARSVTADQRDRAEAIVRRRTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
P +P W FEP LR +++ +A L V+ D R L AS+L+E RR D YYH EL W
Sbjct 126 PLRAPERWQEFEPTLRRSIEPGMAALVVLDDQSRPILAEASRLTESHRRHDIYYHDELRW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT P GVPP L S+ E+ RVD+GR FPV + NR E+ D +K+LVL+TP DTR
Sbjct 186 WTEPSRPYRGVPPSALVSEEEQGRVDIGRAFPVSGHGNRCPEVRTDEAKILVLTTPGDTR 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
ADALRCGE LST+LL CT AG+ TC LTH+ E +SR + L RG PQ LIRVG AP
Sbjct 246 ADALRCGETLSTVLLACTAAGLGTCALTHVTELPESRATIENLIGDRGVPQVLIRVGTAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIRQT 323
+ APTPR PL V+QIR++
Sbjct 306 TIEEDRAPTPRLPLSDVMQIRRS 328
>gi|306789159|ref|ZP_07427481.1| hypothetical protein acg [Mycobacterium tuberculosis SUMu004]
gi|308334367|gb|EFP23218.1| hypothetical protein acg [Mycobacterium tuberculosis SUMu004]
Length=320
Score = 338 bits (867), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 173/300 (58%), Positives = 209/300 (70%), Gaps = 4/300 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+K+AV LACRAPS+HNSQPWRW+AE +HT V LF+++ R + ATDHSGR+A++ CGA
Sbjct 10 VIKSAVQLACRAPSLHNSQPWRWIAE---DHT-VALFLDKDRVLYATDHSGREALLGCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDH R+AM AA AN+ RFP PN P LA+++FSP D VT G R RA AIL RRTDRL
Sbjct 66 VLDHFRVAMAAAGTTANVERFPNPNDPLHLASIDFSPADFVTEGHRLRADAILLRRTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF P W L E LR V D +DV++DD R L AS+L+E LR D YHAEL W
Sbjct 126 PFAEPPDWDLVESQLRTTVTADTVRIDVIADDMRPELAAASKLTESLRLYDSSYHAELFW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT F + G+P +L S AE RV GRDFPV + +RR E DRSKVLVLST + R
Sbjct 186 WTGAFETSEGIPHSSLVSAAESDRVTFGRDFPVVANTDRRPEFGHDRSKVLVLSTYDNER 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
A LRCGE+LS +LL+ TMAG+ATCTLTH+ E SRD+V L Q PQAL+RVG+AP
Sbjct 246 ASLLRCGEMLSAVLLDATMAGLATCTLTHITELHASRDLVAALIGQPATPQALVRVGLAP 305
>gi|169630982|ref|YP_001704631.1| hypothetical protein MAB_3903 [Mycobacterium abscessus ATCC 19977]
gi|169242949|emb|CAM63977.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=330
Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/322 (52%), Positives = 213/322 (67%), Gaps = 1/322 (0%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V++ A+ LACRAPS+HN+QPWRW+ + G+ +HL+++R R V TD +GR+AIISCGA
Sbjct 10 VIQTAIQLACRAPSLHNTQPWRWIVDLGASAGDLHLYLDRTRCVTRTDGAGREAIISCGA 69
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
LDH R+AM +A W I R P P+ PD LA + FSP V G R RA AILQRRTDRL
Sbjct 70 ALDHFRVAMASAGWMTRIERIPDPDNPDHLAAITFSPRTVVVVGDRRRADAILQRRTDRL 129
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF++P W F L + +LDV+ D R +L AS LS+ LR D Y EL+W
Sbjct 130 PFETPPNWSQFARMLNTVIADRAVLLDVIDDVMRPKLADASALSDALRIYDSAYQTELDW 189
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+PF L GVP L S A+ RVD+GR FPV + + R L +D++KVL LST DT
Sbjct 190 WTAPFTLEDGVPRSALVSAADSDRVDIGRTFPVVAERASRPGLQEDQAKVLALSTARDTP 249
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
+ LRCGE+LS +LLE T+AGMATCT+TH++E + SR++V G R PQALIRVG+AP
Sbjct 250 KNLLRCGELLSEVLLEATLAGMATCTITHMLELTASREVV-GAAIGRSHPQALIRVGLAP 308
Query 301 PLAAVPAPTPRRPLDSVLQIRQ 322
+P PTPRR L V +IR
Sbjct 309 TFGRIPPPTPRRSLADVFEIRS 330
>gi|118469419|ref|YP_888240.1| hypothetical protein MSMEG_3952 [Mycobacterium smegmatis str.
MC2 155]
gi|118170706|gb|ABK71602.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=318
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/320 (52%), Positives = 212/320 (67%), Gaps = 4/320 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
++ AV LACRAPS+HNSQPWRWV T+V LF++ HR V ++D SGR+A ISCGA
Sbjct 1 MITEAVGLACRAPSLHNSQPWRWVDHG----TSVDLFLDHHRIVRSSDSSGREAHISCGA 56
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
LDHLR+AM AA W ++ RFP PN + LA ++FSP+ HVT R+RA AI +RRTDRL
Sbjct 57 ALDHLRVAMAAAGWVIHVDRFPNPNNREHLANIQFSPVAHVTDAMRDRASAITRRRTDRL 116
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
P P +W P + A+D + +++DD R RL ASQL+E LRR D +YH EL+W
Sbjct 117 PLHPPAHWDTVAPLVNAAIDHEAVRFVMLADDARGRLAEASQLTESLRRYDEFYHRELQW 176
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+ + GVP + L S E RV + R FP R + RR ++A D +++ VL TP DT
Sbjct 177 WTANVRHSDGVPAEALVSSPEAERVGVNRAFPSREHAERRPDVARDEARIAVLITPEDTP 236
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
DA+ CGE LSTILLECTMAG+ATC LTH+ E +SR I+ L G PQ LIR+G AP
Sbjct 237 RDAIACGEALSTILLECTMAGLATCPLTHITEMPESRRIILDLAGTTGIPQVLIRIGSAP 296
Query 301 PLAAVPAPTPRRPLDSVLQI 320
P+ VP TPRR L VL++
Sbjct 297 PVDDVPPVTPRRSLAEVLEV 316
>gi|333989875|ref|YP_004522489.1| hypothetical protein JDM601_1235 [Mycobacterium sp. JDM601]
gi|333485843|gb|AEF35235.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=325
Score = 321 bits (823), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 170/321 (53%), Positives = 212/321 (67%), Gaps = 6/321 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
VL AV LACRAPS+HNSQPWRWVAE G + LF+ R V D S R+A+ISCGA
Sbjct 10 VLTEAVRLACRAPSLHNSQPWRWVAERGR----LELFLEPSRAVHG-DRSAREALISCGA 64
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDHLR+AM AA + A + RFP QPD LA++EF+P V+ QR RA AIL RRTDRL
Sbjct 65 VLDHLRVAMAAAGFTAEVQRFPDAQQPDHLASIEFTPGGRVSDMQRYRANAILLRRTDRL 124
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +P W FE LRD+V+ D L V+ DD R +L SQLSE LR D YHAE+ W
Sbjct 125 PFMAPRNWEPFEAVLRDSVE-DPVRLCVLGDDVRPKLAEVSQLSEALRMYDAAYHAEINW 183
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+PF + G+P L S AE RVD+GR FPV + RR E+ DD + +++LST +D+
Sbjct 184 WTAPFEVRDGIPRSALVSAAESDRVDIGRAFPVTRNRERRVEVGDDHATIVLLSTATDSP 243
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
+D L CGE LS +LLECTMAG+ATC +TH+ E R ++ G+ + PQ LIR+G AP
Sbjct 244 SDTLACGEALSAVLLECTMAGLATCPVTHVTEVPAGRAMLAGVAGRDDLPQVLIRIGGAP 303
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
L P PTPRR L VL ++
Sbjct 304 ALEKAPEPTPRRALAEVLHVK 324
>gi|120402394|ref|YP_952223.1| hypothetical protein Mvan_1383 [Mycobacterium vanbaalenii PYR-1]
gi|119955212|gb|ABM12217.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=327
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/321 (51%), Positives = 212/321 (67%), Gaps = 4/321 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+ A+ LACRAPS+ NSQPWRWV SE V LF++ R TD +GR+ +ISCG
Sbjct 10 VITEALALACRAPSLFNSQPWRWV----SEGAVVSLFLDDARAPRYTDTTGRELVISCGI 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDH R+AM AA W+ N+ RFP PN D LA+++FS +D VT R RA+AI +RRTDRL
Sbjct 66 VLDHFRVAMAAAGWKCNVDRFPNPNNRDHLASIDFSAMDFVTDAHRQRAEAIARRRTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +P W F L + L ++D R LV AS+L+ RR D YHAEL
Sbjct 126 PFAAPPDWESFIAQLSSGTAQGSVSLHTIADGSRPELVKASELTRSARRYDSKYHAELIG 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+ +A G+P TL S+AE RVD+GRDFP +++RR E+A D +KV+VLST +TR
Sbjct 186 WTADVAVAEGIPTGTLLSEAESDRVDIGRDFPAAGHRDRRGEIAQDHAKVVVLSTVDETR 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
+RCGE+LS++LL+ TMAG+ATC L+HL E +SR IV LT + PQ ++RVG AP
Sbjct 246 DGFVRCGEMLSSLLLDATMAGLATCVLSHLTEVPESRRIVESLTGSQAVPQVVVRVGSAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
A+ +PTPRRP+ VL+IR
Sbjct 306 SGDAIGSPTPRRPVADVLEIR 326
>gi|296169103|ref|ZP_06850762.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896223|gb|EFG75885.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=332
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/323 (54%), Positives = 214/323 (67%), Gaps = 6/323 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+++AV LACRAPS+HNSQPWRWVA+ T +HL+ + + ATDH+GR+ I+SCGA
Sbjct 13 VIRDAVTLACRAPSLHNSQPWRWVADG----TRLHLWADPRHAMHATDHTGRELILSCGA 68
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDHLR+AM AA W++ RFP +PD LA+V F P+++VT R RA AIL+RRTDRL
Sbjct 69 VLDHLRVAMAAAGWESVTERFPTEGRPDHLASVGFLPVENVTPQCRLRADAILRRRTDRL 128
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
P +P W AL AV LDVV DD+R RL AS+L+E LRR D Y EL W
Sbjct 129 PLGAPTAWPTLRSALGRAVTPYGVSLDVVDDDERPRLAEASRLTEQLRRSDTSYLTELRW 188
Query 181 WTSPF-VLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTP-SD 238
WTSPF A VP L S +E RVD+ R FP RRA + D SK++VLSTP D
Sbjct 189 WTSPFEANADHVPESALLSSSEAARVDIARTFPPAGGGRRRASIEADHSKIVVLSTPHDD 248
Query 239 TRADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGI 298
A+ LRCGE LS LLECT+AGMATCTLTH+ E + SRDI+R +T G+PQ LIRVG
Sbjct 249 APAEVLRCGEALSAALLECTLAGMATCTLTHMTELALSRDIIRQVTGGAGQPQLLIRVGR 308
Query 299 APPLAAVPAPTPRRPLDSVLQIR 321
+P PT RRP+ VL++R
Sbjct 309 SPAKDPNAKPTARRPVTEVLEMR 331
>gi|41407841|ref|NP_960677.1| hypothetical protein MAP1743c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396195|gb|AAS04060.1| hypothetical protein MAP_1743c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=333
Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/322 (53%), Positives = 211/322 (66%), Gaps = 5/322 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+ A+ LAC APS+HNSQPWRWVA S T V LFV+ RTV + D SGR+AIISCGA
Sbjct 11 VITAAIELACHAPSLHNSQPWRWVAGS----TGVDLFVDPRRTVKSADKSGREAIISCGA 66
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
LDH R+AM AA W +N+ +FP PN D LA+++ P ++V +R+ A AIL+RRT+RL
Sbjct 67 ALDHFRVAMAAAGWSSNVAQFPNPNNLDHLASIDVVPTEYVARARRDLADAILRRRTNRL 126
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +P +W EP LRDA LDV+ D R LV A++L+E LRR D YH EL+W
Sbjct 127 PFRAPKHWSALEPVLRDAGRDHSVALDVLGPDARPGLVEAARLTEALRRYDDDYHHELDW 186
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WTSP G+P L S+A+ RVD+ R FPV R + + D +K+LVLSTP DTR
Sbjct 187 WTSPSRKFDGIPESALVSEADDRRVDVNRRFPVDPLDERSSAGSYDDAKILVLSTPEDTR 246
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGE-PQALIRVGIA 299
ADALR G+VLS ILLECT AG+ATC +TH+ E RD+++ L PQ LIRVG+
Sbjct 247 ADALRVGQVLSRILLECTAAGLATCPVTHVTELEAGRDLIQHLMADPAAVPQVLIRVGVE 306
Query 300 PPLAAVPAPTPRRPLDSVLQIR 321
P P TPRRPL VLQ R
Sbjct 307 PEGELPPRLTPRRPLGDVLQFR 328
>gi|296170987|ref|ZP_06852482.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894423|gb|EFG74170.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=336
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/321 (53%), Positives = 211/321 (66%), Gaps = 6/321 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
+L++AV ACRAPS+HNSQPW+WVA G V LF++ R + +D SGR+A+ISCGA
Sbjct 21 LLEDAVRSACRAPSLHNSQPWQWVAGGGR----VDLFLDASRAM-VSDRSGREALISCGA 75
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
LDHLR+A+ AA W+A I+RFP P P+ LA+V+ P VT R RA AI RRTDRL
Sbjct 76 ALDHLRVALAAAGWRARISRFPDPADPNHLASVDVIPAQDVTDDVRRRAGAIWTRRTDRL 135
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +PM W FEP+LR A+D D LDV++D+ R L AS ++E +R D Y EL W
Sbjct 136 PFVAPMNWEAFEPSLRGAIDGDAVHLDVMADEMRDMLAQASSVAESVRLYDQAYQEELHW 195
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+PF GVP L S AER RVD+GR FP RR E+ D S +LVLST DTR
Sbjct 196 WTAPFEATEGVPYSALVSPAERERVDVGRTFPTTHDPERRTEVPRDESTILVLSTDDDTR 255
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
AL GE LS +LLECTMA +ATC +TH+ E +R+++ L + PQ L+RVG+AP
Sbjct 256 LAALVSGEALSAVLLECTMANLATCPVTHVTELKVTREMIANLLDEGRRPQVLVRVGLAP 315
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
A PA TPRRPL VL++R
Sbjct 316 A-AEPPALTPRRPLSEVLRLR 335
>gi|240171509|ref|ZP_04750168.1| hypothetical protein MkanA1_19501 [Mycobacterium kansasii ATCC
12478]
Length=332
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/324 (52%), Positives = 211/324 (66%), Gaps = 7/324 (2%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V++ AV+LAC APS+HNSQPWRW+A T+ L+ + R++PATDH+GR+ ++SCGA
Sbjct 14 VIREAVMLACHAPSLHNSQPWRWIAVG----PTLQLWADSSRSMPATDHTGRELLLSCGA 69
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDHLR+AM+ A W RFP P DQLAT+ F D +TA Q+ RAQAIL+RRTDRL
Sbjct 70 VLDHLRVAMSVAGWDTTTERFPDPASQDQLATLRFRHADTITAEQQRRAQAILRRRTDRL 129
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PFD P W E LR V LDVV+D+QR L AS+L+E LRR D Y +EL W
Sbjct 130 PFDPPARWTAAESVLRRVVAPYDVQLDVVADEQRPALAEASRLTETLRRYDTTYLSELRW 189
Query 181 WTSPFVL--AHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSD 238
WTSPF +H P L S AE RVD+ R FP RR + D+SK++VLST SD
Sbjct 190 WTSPFTTDPSHA-PEGALVSTAEAARVDIARAFPPAGGGRRRPGIDHDQSKIVVLSTDSD 248
Query 239 TRADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGI 298
D LRCGE +S +LLECTMAGMATCTLTH+ E + SR+I+ +T G PQ LIR+G
Sbjct 249 DPLDVLRCGEAMSAVLLECTMAGMATCTLTHMTEIAMSRNIIAQITGTAGRPQLLIRLGR 308
Query 299 APPLAAVPAPTPRRPLDSVLQIRQ 322
+P T RRP+ VL+ R+
Sbjct 309 SPANDQHVERTARRPVTEVLEFRR 332
>gi|183983470|ref|YP_001851761.1| hypothetical protein MMAR_3487 [Mycobacterium marinum M]
gi|183176796|gb|ACC41906.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=326
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/322 (53%), Positives = 215/322 (67%), Gaps = 5/322 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+ AV LA RAPS+HNSQPWRWVA SG+ V LF++ HR V + D SGR+A+ISCGA
Sbjct 10 VIARAVELASRAPSLHNSQPWRWVAASGA----VDLFLDPHRMVTSADDSGREAVISCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
+LDH ++AM AA W +N+ FP PN PD LA+++F+ ID + +R RA+AI +RRTDR
Sbjct 66 LLDHFQVAMAAAGWDSNVDLFPNPNNPDHLASIDFAAIDDIAQARRERAEAISRRRTDRR 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +P W FEP LR +VD + L V+++D R RL AS+L+E LRR D YH EL W
Sbjct 126 PFRAPGDWESFEPVLRSSVDTETVTLAVLAEDARPRLAEASRLTEALRRYDDAYHHELAW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+P + G+P LAS V + R FPV + D + ++VLSTP D+R
Sbjct 186 WTAPSRESEGIPQSALASGTAAREVAVNRSFPVDWRSESSSAGRHDHATIVVLSTPGDSR 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
ADAL CG LS +LLECT+AG+ATC +THL E RD VR LT + EPQ L+RVGIAP
Sbjct 246 ADALNCGAALSAVLLECTLAGLATCPVTHLTEMDAGRDTVRELTGGQAEPQVLVRVGIAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIRQ 322
AA P TPRRPL VL+IR+
Sbjct 306 TGAA-PELTPRRPLRDVLEIRR 326
>gi|183983458|ref|YP_001851749.1| hypothetical protein MMAR_3475 [Mycobacterium marinum M]
gi|183176784|gb|ACC41894.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=329
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/322 (52%), Positives = 212/322 (66%), Gaps = 5/322 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V++ +V LA RAPS+HNSQPWRWVAE+ T+ L+ +R R++PATDH+GR+ I+SCGA
Sbjct 11 VIRESVALASRAPSLHNSQPWRWVAEAD----TLQLWADRARSMPATDHAGRELILSCGA 66
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDHLR+A +AA W + R P PD LAT+ F P+ VTA QR+RA AI QRRTDRL
Sbjct 67 VLDHLRVATSAAGWDSVTERTPDRGNPDHLATLRFHPMQAVTASQRHRADAIGQRRTDRL 126
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PFD W EP LR A + +L VV+DD R L AS+L+E LRR+D Y +EL W
Sbjct 127 PFDPVTQWAAIEPVLRHAAVRYDVLLHVVADDGRAALAEASRLTENLRRNDTTYMSELRW 186
Query 181 WTSPFVL-AHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDT 239
WTSPF A P L S +E RVD+ R FP RR+ + D+SK++VLST SD
Sbjct 187 WTSPFSSNADHAPEGALLSTSEASRVDVARSFPPAGGGRRRSAIEHDQSKIVVLSTDSDD 246
Query 240 RADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIA 299
D LRCGE LS +LLECTMAG+ATCTLTH+ E + SR+I+ + + PQ LIR+G +
Sbjct 247 LCDVLRCGESLSAVLLECTMAGLATCTLTHMTEMAMSRNIIAEIVQTTSLPQLLIRIGKS 306
Query 300 PPLAAVPAPTPRRPLDSVLQIR 321
P + RRP+D VL+ R
Sbjct 307 PGHDQHVERSGRRPVDDVLEFR 328
>gi|254822192|ref|ZP_05227193.1| hypothetical protein MintA_19824 [Mycobacterium intracellulare
ATCC 13950]
Length=325
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/319 (51%), Positives = 208/319 (66%), Gaps = 5/319 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V++NAV +ACRAPS++N+QPW WV ++ T + LF++ R V TD S R+A I CG
Sbjct 9 VIENAVRMACRAPSLYNTQPWLWV----TDGTGLDLFLDTSRVV-HTDRSMREAHIGCGG 63
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
LDHLR+ M AA W A++ R P+P P LA VEF D VT QR RA AIL+RRTDRL
Sbjct 64 ALDHLRVGMAAAGWIADVERLPEPGDPTHLARVEFVAADGVTEEQRRRADAILKRRTDRL 123
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +P+ W FEP LR D D LDV+ ++ R RL A++ +E LR D YH EL+W
Sbjct 124 PFLAPIDWESFEPLLRGGFDGDGVRLDVLPEETRPRLTEAAEFTESLRLYDSPYHLELDW 183
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+PF ++ G+P +L S AE RV + R FP RRA + D SK+L+LST D+
Sbjct 184 WTAPFEVSEGIPYSSLISAAESHRVGVNRHFPFTRNLERRAGITRDFSKILMLSTEDDSH 243
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
A AL CGE LS++LLECTMAG+ATC ++ L E S SR+++ +T PQ L+RVG+AP
Sbjct 244 ASALACGEALSSVLLECTMAGLATCPVSQLTELSVSRELLAAITGHTDLPQVLVRVGVAP 303
Query 301 PLAAVPAPTPRRPLDSVLQ 319
L P PTPRR L VL+
Sbjct 304 ALDGTPPPTPRRALADVLR 322
>gi|108801092|ref|YP_641289.1| hypothetical protein Mmcs_4128 [Mycobacterium sp. MCS]
gi|119870233|ref|YP_940185.1| hypothetical protein Mkms_4203 [Mycobacterium sp. KMS]
gi|126436930|ref|YP_001072621.1| hypothetical protein Mjls_4359 [Mycobacterium sp. JLS]
gi|108771511|gb|ABG10233.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696322|gb|ABL93395.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126236730|gb|ABO00131.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=325
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/320 (52%), Positives = 211/320 (66%), Gaps = 5/320 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V++ AV LACRAPS+HNSQPWRWV ++ + LF++ R + + D SGR+A+ISCGA
Sbjct 10 VIRGAVQLACRAPSLHNSQPWRWVVDTDG----LQLFLDPARLMFSADSSGREAVISCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VL HLR+A+ AA + A++ R P PN D LATV + +D VT R RA AIL RRTDRL
Sbjct 66 VLHHLRVALAAAGFAAHVDRLPDPNHRDHLATVTVTSMDFVTEAHRRRADAILLRRTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
P + W FE +R ++ DV LDV++D R RL S ++E LR D YHAEL W
Sbjct 126 PMAAAPAWESFEQWMRTRLEADV-QLDVLADHARPRLAETSHMTEALRLYDSSYHAELSW 184
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+PF ++ G+P L S E RVDLGR FPV RRA + +DR+ ++VLST D R
Sbjct 185 WTAPFEISAGIPQSALVSAEESERVDLGRSFPVTRGAERRAAIDEDRATIVVLSTDGDDR 244
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
DALR GE +S +LLE TMAG+ATCT+TH+ E SR +V GL + PQ LIR+G+AP
Sbjct 245 LDALRSGEAMSAVLLEATMAGLATCTVTHVTELESSRALVGGLLEREARPQVLIRIGLAP 304
Query 301 PLAAVPAPTPRRPLDSVLQI 320
+ VP PTPRR L+ VLQ
Sbjct 305 AIEQVPPPTPRRALEEVLQF 324
>gi|296169087|ref|ZP_06850746.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896207|gb|EFG75869.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=328
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/322 (54%), Positives = 211/322 (66%), Gaps = 5/322 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
VL AV LACRAPS+HNSQPWRWV TV LF + R V + D SGR++IISCGA
Sbjct 10 VLTRAVELACRAPSLHNSQPWRWVVGG----PTVDLFADPDRMVSSADSSGRESIISCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDH R+AM A W + + FP PN D LA+++F P D+V +R+RA AIL+RRTDR
Sbjct 66 VLDHFRVAMAADGWDSGVDEFPNPNNLDHLASIDFVPADYVAVARRDRAAAILRRRTDRR 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +P W FEP LR A D D LDV++ D R RLV A++L+E LRR D Y EL W
Sbjct 126 PFGAPRGWSSFEPVLRSAFDGDAVRLDVLAGDARPRLVEAARLTEALRRYDDLYEHELRW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+P G+P LA++A+ V + R FP + + D+++VLVLSTP DTR
Sbjct 186 WTAPDRHDDGIPEAALANEAQARAVGVNRRFPADEHARAGSAGLTDQAEVLVLSTPGDTR 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLT-RQRGEPQALIRVGIA 299
ADA RCG+ LS ILLECTMAG+ATCT+TH+ E RDIV GL + PQ LIRVG A
Sbjct 246 ADAFRCGQALSAILLECTMAGLATCTVTHVTELPAGRDIVSGLIPDAQAVPQVLIRVGTA 305
Query 300 PPLAAVPAPTPRRPLDSVLQIR 321
PP P PTPRRP+ VL++R
Sbjct 306 PPGRGGPEPTPRRPVRDVLELR 327
>gi|118464897|ref|YP_881697.1| hypothetical protein MAV_2505 [Mycobacterium avium 104]
gi|118166184|gb|ABK67081.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=333
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/322 (53%), Positives = 212/322 (66%), Gaps = 5/322 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+ A+ LAC APS+HNSQPWRWVA S T V LFV+ RTV + D SGR+AIISCGA
Sbjct 11 VITAAIELACHAPSLHNSQPWRWVAGS----TGVDLFVDPRRTVKSADKSGREAIISCGA 66
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
LDH R+AM AA W +N+ +FP PN D LA+++ P ++V +R+ A AIL+RRT+RL
Sbjct 67 ALDHFRVAMAAAGWSSNVAQFPNPNNLDHLASIDVVPTEYVARARRDLADAILRRRTNRL 126
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +P +W EP LRD LDV+ D R LV A++L+E LRR D YH EL+W
Sbjct 127 PFRAPKHWSALEPVLRDVGRDHSVALDVLGPDARPGLVEAARLTEALRRYDDDYHHELDW 186
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WTSP G+P L S+A+ RVD+ R FPV R + + D +K+LVLSTP DTR
Sbjct 187 WTSPSRKFDGIPESALVSEADDRRVDVNRRFPVDPLDERSSAGSYDDAKILVLSTPEDTR 246
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQ-RGEPQALIRVGIA 299
ADALR G+VLS ILLECT AG+ATC +TH+ E RD++R L PQ LIRVG+
Sbjct 247 ADALRVGQVLSRILLECTAAGLATCPVTHVTELEAGRDLIRHLMADPAAVPQVLIRVGVE 306
Query 300 PPLAAVPAPTPRRPLDSVLQIR 321
P + P PTPRRPL VLQ R
Sbjct 307 PEGESPPRPTPRRPLGDVLQFR 328
>gi|254775162|ref|ZP_05216678.1| hypothetical protein MaviaA2_10891 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=332
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/322 (53%), Positives = 211/322 (66%), Gaps = 5/322 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+ A+ LAC APS+HNS+PWRWVA S T V LFV+ RTV + D SGR+AIISCGA
Sbjct 10 VITAAIELACHAPSLHNSKPWRWVAGS----TGVDLFVDPRRTVKSADKSGREAIISCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
LDH R+AM AA W +N+ +FP PN D LA+++ P ++V +R+ A AIL+RRT+RL
Sbjct 66 ALDHFRVAMAAAGWSSNVAQFPNPNNLDHLASIDVVPTEYVARARRDLADAILRRRTNRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +P +W EP LRDA LDV+ D R LV A++L+E LRR D YH EL+W
Sbjct 126 PFRAPKHWSALEPVLRDAGRDHSVALDVLGPDARPGLVEAARLTEALRRYDDDYHHELDW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WTSP G+P L S+A+ RVD+ R FPV R + + D +K+LVLSTP DTR
Sbjct 186 WTSPSRKFDGIPESALVSEADDRRVDVNRRFPVDPLDERSSAGSYDDAKILVLSTPEDTR 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQ-RGEPQALIRVGIA 299
ADALR G+VLS ILLECT AG+ATC +TH+ E RD++R L PQ LIRVG+
Sbjct 246 ADALRVGQVLSRILLECTAAGLATCPVTHVTELEAGRDLIRHLMADPAAVPQVLIRVGVE 305
Query 300 PPLAAVPAPTPRRPLDSVLQIR 321
P PTPRRPL VLQ R
Sbjct 306 PEGELPRRPTPRRPLGDVLQFR 327
>gi|296170572|ref|ZP_06852156.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894804|gb|EFG74529.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=326
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/319 (51%), Positives = 208/319 (66%), Gaps = 5/319 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V++NAV LACRAPS++N+QPWRWVA+ + LF++ R V A D S R+A ISCG
Sbjct 10 VIENAVRLACRAPSLYNTQPWRWVADGAR----LDLFLDASRVVHA-DRSMREAHISCGG 64
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
L+HL +A AA W A++ RFP+P P LA V+ VT QR RA AIL+RRTDRL
Sbjct 65 ALEHLLVATAAAGWSADVERFPEPGNPAHLARVKLVAAAGVTDRQRRRADAILKRRTDRL 124
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +P+ W FEP LR V LDV+ ++ R RL A++ +E LR D YH EL+W
Sbjct 125 PFLAPIDWESFEPLLRGRVGTGPVRLDVLPEEIRPRLAEAAEFTESLRLYDSAYHLELDW 184
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+PF ++ G+P +L S AE RV + R FP +RRA + D S++L+LST D
Sbjct 185 WTAPFEVSEGIPYSSLVSAAESDRVGVNRHFPFTRNPDRRAGVTRDSSQILMLSTEDDGH 244
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
ADA CGEVLS++LLECTMAG+ATC ++ L E S SR+++ LT PQ LIRVG+AP
Sbjct 245 ADAFACGEVLSSVLLECTMAGLATCPVSQLTELSVSRELLAALTGHTDLPQVLIRVGVAP 304
Query 301 PLAAVPAPTPRRPLDSVLQ 319
L A P PTPRR L VL+
Sbjct 305 ALDATPPPTPRRALADVLR 323
>gi|333990936|ref|YP_004523550.1| hypothetical protein JDM601_2296 [Mycobacterium sp. JDM601]
gi|333486904|gb|AEF36296.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=327
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/320 (52%), Positives = 203/320 (64%), Gaps = 5/320 (1%)
Query 2 LKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGAV 61
+++AV ACRAPS HN QPWRWV + G E + LFV+ R +P +D GRQA+I CGA
Sbjct 11 IRDAVQTACRAPSQHNIQPWRWVLD-GDE---LRLFVDPGRILP-SDRGGRQAVIGCGAA 65
Query 62 LDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRLP 121
LDHLR A+ A + ++ RFP PN PD LA++ F+ + VTAG R AI RR+DRL
Sbjct 66 LDHLRAAVAAVGLRTDVQRFPNPNNPDHLASIRFARMGFVTAGHHRRVDAIRVRRSDRLA 125
Query 122 FDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEWW 181
+P W LFEP LR+ + LDV+ +D R RL ASQL+E LR D YHAEL W
Sbjct 126 LAAPSNWDLFEPVLRNHIGHMRVHLDVLPEDARPRLAQASQLAESLRLYDSNYHAELNRW 185
Query 182 TSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTRA 241
T PF + G+P +LAS E RV +GR FP Q RR L +D++ V+VLST SDTRA
Sbjct 186 TVPFEESAGIPYRSLASLTEGDRVGIGRAFPAGHRQERRVHLTEDQAAVVVLSTDSDTRA 245
Query 242 DALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAPP 301
DAL GE LS +LLECTMAG+ATC LTHL E SR+IV L PQ LIR+G AP
Sbjct 246 DALATGEALSAVLLECTMAGLATCPLTHLTEVQASREIVETLVGGDALPQVLIRIGHAPA 305
Query 302 LAAVPAPTPRRPLDSVLQIR 321
P T RRPL VL+++
Sbjct 306 TEESPPRTRRRPLGEVLKVQ 325
>gi|145224427|ref|YP_001135105.1| hypothetical protein Mflv_3845 [Mycobacterium gilvum PYR-GCK]
gi|145216913|gb|ABP46317.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=332
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/322 (50%), Positives = 205/322 (64%), Gaps = 5/322 (1%)
Query 2 LKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGAV 61
+ +AV +ACRAPS+HNSQPWRWVA ++H V L+ + R + A D +GR+A+ISCGAV
Sbjct 11 IIDAVDVACRAPSLHNSQPWRWVA---TDHG-VDLYADPDRMIRAADSTGREALISCGAV 66
Query 62 LDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRLP 121
LDH R+AM AA W + R P+P+ P +A++ F+ VTA Q+ RA AIL RRTDRLP
Sbjct 67 LDHFRVAMAAAGWSITVERLPEPSDPRHIASIRFAAATEVTAEQKRRADAILVRRTDRLP 126
Query 122 FDSPMYWHL-FEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
+P W + E A + + V +R LV ASQL+EVLR D YH+EL W
Sbjct 127 LSAPRDWDVPGETGAAGAEPDNPVRVHTVPGHKRDMLVEASQLAEVLRLYDSDYHSELFW 186
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+ FV G+P L S AE RV +GR FPV + RR EL D + ++VLST D+R
Sbjct 187 WTADFVATEGIPRSALVSAAEGDRVGIGRTFPVTTQPERRGELESDDAAIVVLSTEDDSR 246
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
LRCGE LS LL+ TM G+ATCT+TH+ E RD+V + PQ L+RVG AP
Sbjct 247 ESVLRCGEALSAFLLDATMTGLATCTVTHITEVPAGRDVVASVLATTSIPQVLVRVGAAP 306
Query 301 PLAAVPAPTPRRPLDSVLQIRQ 322
L A+PAPTPRRP+ VL+IR+
Sbjct 307 ALDAIPAPTPRRPVHDVLEIRR 328
>gi|108798048|ref|YP_638245.1| hypothetical protein Mmcs_1075 [Mycobacterium sp. MCS]
gi|119867143|ref|YP_937095.1| hypothetical protein Mkms_1091 [Mycobacterium sp. KMS]
gi|126433708|ref|YP_001069399.1| hypothetical protein Mjls_1102 [Mycobacterium sp. JLS]
gi|108768467|gb|ABG07189.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693232|gb|ABL90305.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126233508|gb|ABN96908.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=326
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 177/321 (56%), Positives = 217/321 (68%), Gaps = 7/321 (2%)
Query 2 LKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGAV 61
+ +AV LACRAPSVHNSQPW WVA+ + + L ++ R V ATD SGR+A++SCGAV
Sbjct 11 ISDAVQLACRAPSVHNSQPWHWVAD----RSGLQLLLDTDRLV-ATDKSGREALLSCGAV 65
Query 62 LDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRLP 121
LDHLR+AM A W A+I R+P PN LA ++FSP+ +VT G R RA+AI +R TDRLP
Sbjct 66 LDHLRVAMAAGGWIAHIDRYPNPNDHLHLAAIDFSPMSYVTDGHRARAEAIARRYTDRLP 125
Query 122 FDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEWW 181
F P W E LRDAVD+ VAMLDV+++D R +L ASQL+E LR D YHAEL WW
Sbjct 126 FGPPPDWDSLELLLRDAVDESVAMLDVIAEDARPQLAEASQLTESLRLYDSDYHAELAWW 185
Query 182 TSPFVLAHGVPPDTLASDAERLRVDLGRDFPV-RSYQNRRAELADDRSKVLVLSTPSDTR 240
T ++ G+P +L S AE RVD+GR FPV RR + +D S+VLV+S DTR
Sbjct 186 TGWLAVSDGIPHGSLVSAAESDRVDIGRHFPVTHGAAERRMSVPEDHSRVLVISAHDDTR 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
D L CGE LS +LLE T+AGMATCTLTHL E SRDI+ L R PQ LIRVG AP
Sbjct 246 RDILGCGETLSRVLLEATLAGMATCTLTHLTELRASRDIISALV-DRDLPQVLIRVGAAP 304
Query 301 PLAAVPAPTPRRPLDSVLQIR 321
VP PTPRR L+ VL++R
Sbjct 305 AYDPVPPPTPRRRLEDVLEVR 325
>gi|315444760|ref|YP_004077639.1| hypothetical protein Mspyr1_31880 [Mycobacterium sp. Spyr1]
gi|315263063|gb|ADT99804.1| hypothetical protein Mspyr1_31880 [Mycobacterium sp. Spyr1]
Length=332
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/322 (50%), Positives = 203/322 (64%), Gaps = 5/322 (1%)
Query 2 LKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGAV 61
+ +AV +ACRAPS+HNSQPWRWVA ++H V L+ + R + A D +GR+A+ISCGAV
Sbjct 11 IIDAVDVACRAPSLHNSQPWRWVA---TDHG-VELYADPDRMIRAADSTGREALISCGAV 66
Query 62 LDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRLP 121
LDH R+AM AA W + R P+P+ P +AT+ F+ VTA QR RA AIL RRTDRLP
Sbjct 67 LDHFRVAMAAAGWSITVERLPEPSDPRHIATIRFATAAEVTAEQRRRADAILLRRTDRLP 126
Query 122 FDSPMYWHLFEPALRDAVDKDVAM-LDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
+P W + D D + + V D+R LV AS L+E LR D YH+EL W
Sbjct 127 LSAPRDWDVPGETGAGGADPDSPVRVHSVPADKREVLVEASYLAEALRLYDSDYHSELFW 186
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+ FV G+P L S AE RV +GR FPV + RR EL D + ++VL T D+R
Sbjct 187 WTADFVATDGIPRSALVSAAEGDRVGIGRTFPVTARPERRGELDSDDAAIVVLCTEDDSR 246
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
LRCGE LS LL+ TM G+ATCT+TH+ E RD+V + PQ L+RVG AP
Sbjct 247 ESVLRCGEALSAFLLDATMTGLATCTVTHITEVPAGRDVVASVLATTSIPQVLVRVGAAP 306
Query 301 PLAAVPAPTPRRPLDSVLQIRQ 322
L A+PAPTPRRP+ VL+IR+
Sbjct 307 ALDAIPAPTPRRPVHDVLEIRR 328
>gi|254774704|ref|ZP_05216220.1| hypothetical protein MaviaA2_08533 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=322
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 164/319 (52%), Positives = 212/319 (67%), Gaps = 5/319 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+++AV LACRAPS++N+QPWRWVA+ + L ++ R V A D S R+A ISCG
Sbjct 6 VIEDAVRLACRAPSLYNTQPWRWVADGAG----LDLLLDTSRVVHA-DRSMREAHISCGG 60
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
L+HLR AM AA W A + RFP+P P LA V F+P D VT QR RA AILQRRTDRL
Sbjct 61 ALEHLRAAMAAAGWTAEVERFPEPGNPGHLARVSFAPSDGVTDHQRRRADAILQRRTDRL 120
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +P+ W FE LR +D V LDV+ ++ R RL A++ +E LR D YH EL+W
Sbjct 121 PFLAPLDWESFEGLLRGRIDAGVVRLDVLPEEMRPRLAEAAEFTESLRLYDSSYHVELDW 180
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+PF ++ G+P +L S AE RV + R FP +RRA + D SK+L+LST D+
Sbjct 181 WTAPFEVSEGIPYSSLISAAEADRVGVNRHFPFTRNPDRRAGVTRDFSKILMLSTEDDSH 240
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
A+A CGEVLS++LLECTMAG+ATC ++ L E S SR+++ +T PQ LIRVG+AP
Sbjct 241 ANAFACGEVLSSVLLECTMAGLATCPVSQLTELSVSRELLAAVTGHTDLPQVLIRVGVAP 300
Query 301 PLAAVPAPTPRRPLDSVLQ 319
L A P PTPRR L VL+
Sbjct 301 ALDAAPPPTPRRALADVLR 319
>gi|118472552|ref|YP_889492.1| hypothetical protein MSMEG_5246 [Mycobacterium smegmatis str.
MC2 155]
gi|118173839|gb|ABK74735.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=329
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/320 (49%), Positives = 205/320 (65%), Gaps = 4/320 (1%)
Query 2 LKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGAV 61
L NAV LA RAPS+HN+QPWR +AE G + LF++ R V +TD S R+A++SCG +
Sbjct 11 LANAVQLAARAPSLHNTQPWRLIAEDGE----LKLFLDPSRVVRSTDRSSREAVMSCGVL 66
Query 62 LDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRLP 121
LDHLR+A+ AA W + RFP PN D LAT+ F P+ VT G R RA AIL RRTDRLP
Sbjct 67 LDHLRVALAAAGWDTEVQRFPNPNDRDHLATLSFRPLQFVTEGHRKRADAILARRTDRLP 126
Query 122 FDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEWW 181
+ + W FE LR + +D + +D R + A+ L+E LR D YH+EL WW
Sbjct 127 MSAYVDWDAFETLLRARLGDGPVHMDTLGEDVREEVAEAAALTESLRLYDAAYHSELAWW 186
Query 182 TSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTRA 241
T+PF G+P L S E RV + RDFPV + +RR L +D + ++VLST +R
Sbjct 187 TTPFATEDGIPQTALISAEESERVAVSRDFPVAPHSSRRPALNNDAATIVVLSTDGYSRE 246
Query 242 DALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAPP 301
DAL GE LS +LLECTM+G+ATC +TH+ E SRDI+ L + PQ L+R+G+AP
Sbjct 247 DALDAGEGLSKVLLECTMSGLATCPVTHVTELHTSRDIIGRLIVRDACPQVLVRIGLAPA 306
Query 302 LAAVPAPTPRRPLDSVLQIR 321
L VP PTPRRP+D+ L++R
Sbjct 307 LDEVPPPTPRRPVDAFLEVR 326
>gi|120403538|ref|YP_953367.1| hypothetical protein Mvan_2550 [Mycobacterium vanbaalenii PYR-1]
gi|119956356|gb|ABM13361.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=331
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 155/320 (49%), Positives = 205/320 (65%), Gaps = 4/320 (1%)
Query 2 LKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGAV 61
+ +A+ LACRAPS+HNSQPWRWV +H + L+V+ R + + D +GRQA++SCGA
Sbjct 11 IVDALQLACRAPSLHNSQPWRWVV---VDHR-LDLYVDPARVIRSADATGRQALLSCGAA 66
Query 62 LDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRLP 121
LDH R+AMTAA W ++ RFP P LAT+EF+ V+ Q+ RA AIL R +DRLP
Sbjct 67 LDHFRVAMTAAGWNTSVRRFPDSADPHHLATIEFAAAGEVSYEQKRRADAILLRHSDRLP 126
Query 122 FDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEWW 181
+P W L A + A L VV++D R+ L S+L+E +R D YHAEL WW
Sbjct 127 LAAPPDWERLTDTLTSAAGRGPAQLHVVAEDLRSPLAEVSRLAEAMRLYDARYHAELHWW 186
Query 182 TSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTRA 241
T+ F G+P L + E RVD+GR FPV + RR L +DR+ VLVLST D+R
Sbjct 187 TASFAEREGIPRSALITATESERVDIGRSFPVTASPERRGHLDEDRAGVLVLSTADDSRE 246
Query 242 DALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAPP 301
LRCGE LS +LL+ TMAGM+TCT+TH+ E + RD++ L PQAL+RVG+AP
Sbjct 247 SVLRCGEALSAVLLDATMAGMSTCTVTHVTEVPEGRDVLASLIGGTAIPQALVRVGLAPA 306
Query 302 LAAVPAPTPRRPLDSVLQIR 321
+ A P PTPRRP+ VL+IR
Sbjct 307 MDATPPPTPRRPVREVLEIR 326
>gi|240171520|ref|ZP_04750179.1| hypothetical protein MkanA1_19556 [Mycobacterium kansasii ATCC
12478]
Length=326
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/322 (51%), Positives = 214/322 (67%), Gaps = 5/322 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+ AV LAC APS+HNSQPWRW+A+S T V LF++ HR V + D SGR+A+ISCGA
Sbjct 10 VITKAVELACHAPSLHNSQPWRWLADS----TAVDLFLDPHRLVTSADSSGREAVISCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
+LDH ++AM AA W A + FP PN D LA+++F+P+D+VT +R+RA AIL+RRTDR
Sbjct 66 LLDHFQVAMAAAGWNAAVDLFPNPNDLDHLASIDFAPMDYVTQPRRDRADAILRRRTDRR 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF +P W E LR + + D L V++D+ R RL AS+L+E LRR D YH EL W
Sbjct 126 PFRAPSEWASLESVLRSSFENDGIELAVLADEARPRLAEASRLTEALRRYDDSYHHELAW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+P + G+P LAS + V + R FP + R + D+++++VLSTP DTR
Sbjct 186 WTAPSRESEGIPESALASGSAARAVAVNRRFPTDWHSERSSASRPDQARIVVLSTPGDTR 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
ADAL CG LS +LLECT+AG+ATC +THL E + SR IV L PQ LIRVG+AP
Sbjct 246 ADALDCGRALSAVLLECTLAGLATCPVTHLTEIAASRAIVGDLVGSPAVPQVLIRVGVAP 305
Query 301 PLAAVPAPTPRRPLDSVLQIRQ 322
+P PTPRR L VL+ R+
Sbjct 306 A-GEIPPPTPRRLLRDVLEFRR 326
>gi|145225570|ref|YP_001136248.1| hypothetical protein Mflv_4994 [Mycobacterium gilvum PYR-GCK]
gi|315445923|ref|YP_004078802.1| nitroreductase family protein [Mycobacterium sp. Spyr1]
gi|145218056|gb|ABP47460.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315264226|gb|ADU00968.1| nitroreductase family protein [Mycobacterium sp. Spyr1]
Length=327
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/300 (49%), Positives = 190/300 (64%), Gaps = 4/300 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V+ +AV LA RAPS+HNSQPWRWVA++ T V LF++ TD +GR+ +ISCGA
Sbjct 10 VITDAVALASRAPSLHNSQPWRWVADA----TAVMLFLDDAAAPRHTDPTGRELVISCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
VLDH R+AM AA W+++ RFP PN D LATV FS +D VT R RA A+ +R TDRL
Sbjct 66 VLDHFRVAMAAAGWRSHTERFPNPNNLDHLATVGFSRLDFVTDAHRRRADAVSRRHTDRL 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF P +W F L L V+ D R LV AS+L+ +RR D YHAEL
Sbjct 126 PFAEPAHWDGFLRGLTPFSASQGVSLHVLPDASRAALVEASELTRTIRRYDSDYHAELIG 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
WT+ +A G+P L S E V + RDFP + +RR E+A+D ++V+VLST D+R
Sbjct 186 WTADVAVAEGIPSAALLSPIESAHVGIARDFPAAGHGDRRGEIAEDHARVVVLSTGDDSR 245
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
A L CGE+LS+ LL+ T+AG++TCTL+HLIE +SR + LT PQ L+RVG AP
Sbjct 246 AVFLACGEMLSSFLLDATLAGLSTCTLSHLIEVPESRKTLAALTGSPDSPQLLVRVGTAP 305
>gi|118468538|ref|YP_888232.1| hypothetical protein MSMEG_3943 [Mycobacterium smegmatis str.
MC2 155]
gi|118169825|gb|ABK70721.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=320
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 151/322 (47%), Positives = 190/322 (60%), Gaps = 6/322 (1%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
++ +A+ LACRAPS+HNSQPW W A T+HLFV++ R + + DH GR+A+I CGA
Sbjct 1 MIGDALRLACRAPSLHNSQPWLWAAVD----KTLHLFVDKQRILYSADHMGREAVIGCGA 56
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHV-TAGQRNRAQAILQRRTDR 119
+LDH +AM A W + R P LA++EF I +R RA AI +RRTDR
Sbjct 57 MLDHFCVAMAADGWVPKVARLTDRGDPLHLASIEFPEIRLFPREHRRRRAAAISRRRTDR 116
Query 120 LPFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELE 179
LPF P W E LR ++ D DVV D R L AS+L+E LR+ D YHAEL
Sbjct 117 LPFAEPADWPTLEVQLRKSIAFDTVGFDVVPDHARPELAYASRLTESLRQYDSSYHAELY 176
Query 180 WWTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDT 239
WWT F G+P L S +E RV +GR FP +R A D++KV+VLST +
Sbjct 177 WWTGQFESIDGIPYSALVSASESERVGVGRRFPNPRTGDRCAGPGHDQAKVVVLSTLEND 236
Query 240 RADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIA 299
R L CGE LS +LL+ T+AGMATCTLTH+ E + SRDIV L Q PQ LIRVG+A
Sbjct 237 RTSILNCGEALSAVLLDATVAGMATCTLTHITELATSRDIVARLIGQEATPQVLIRVGVA 296
Query 300 PPLAAVPAPTPRRPLDSVLQIR 321
PA TPRRPL+ R
Sbjct 297 TRDDDAPA-TPRRPLEEFFTGR 317
>gi|111017049|ref|YP_700021.1| hypothetical protein RHA1_ro00027 [Rhodococcus jostii RHA1]
gi|110816579|gb|ABG91863.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=338
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/330 (44%), Positives = 187/330 (57%), Gaps = 13/330 (3%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
+++AV LACRAPS+HNSQPWRWV T + L+ + R +PATD GRQ +ISCGA
Sbjct 14 TVESAVALACRAPSLHNSQPWRWVM-----GTALRLYSDPDRLLPATDGFGRQMVISCGA 68
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
L+HL A TA HW+ I R P + L+T+ F P T A AI +RRT+RL
Sbjct 69 ALNHLEYAFTANHWRLVIERLPHSSDRQLLSTINFIPAPAPTDFVARMAVAIGRRRTERL 128
Query 121 PFDSPMYW-HLFEPALRDAVDKDVAMLDVVSDDQRTR--LVVASQLSEVLRRDDPYYHAE 177
P D P W E +R V + D+ QR+R L AS+ LR DDP Y AE
Sbjct 129 PMDPPPAWADTLEQLVRITAGTGVELEDL---GQRSRPALEEASRRMTGLRHDDPTYQAE 185
Query 178 LEWWTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPS 237
L WW+ + GVP SD ++ V L R+FP ++DR+ +L+LST +
Sbjct 186 LRWWSGRGLFPDGVPEQARPSDRQQHSVHLSREFPPGRASTPDGGPSEDRAAILLLSTSA 245
Query 238 DTRADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVG 297
D+R D LR GEVLS +LL CT G+ TC +THL E + +R ++R L+ G PQ LIRVG
Sbjct 246 DSRLDWLRSGEVLSAVLLACTDRGLGTCPVTHLTERAVTRTLLRELSSGEGMPQVLIRVG 305
Query 298 IAPPLAAVPAPTPRRPLDSVLQIRQTPEKG 327
+ P+ TPRRPL VL +R+ P G
Sbjct 306 AGTGVGE-PSTTPRRPLSEVL-VRERPAPG 333
>gi|111017053|ref|YP_700025.1| hypothetical protein RHA1_ro00031 [Rhodococcus jostii RHA1]
gi|110816583|gb|ABG91867.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=337
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/320 (43%), Positives = 180/320 (57%), Gaps = 7/320 (2%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V++ AV LACRAPSVHNSQPW+W G + L+ R R + +TD SGRQ ++SCGA
Sbjct 18 VVRIAVDLACRAPSVHNSQPWQWTYADGQ----LDLYTERGRLLASTDPSGRQLVVSCGA 73
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
L+HL A+T W +I R P+ LAT+ F + + AI R +DR
Sbjct 74 ALNHLETALTGLKWSVDIRRVPEGPHSGHLATIRFRHDARPQSHDFDLLAAIRHRYSDRR 133
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF PAL D + L +++ D R L A++L+ R+ D Y AEL W
Sbjct 134 PFGPVSMKTPLPPALTDVTRRVDVHLTLLAQDARPTLAKATELTAAARKYDSAYQAELHW 193
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
W + G+P D+LA+ R RVD+GR FP + ++ A DRS VLVLST +D R
Sbjct 194 WAGHSIPQGGIPADSLATAENRDRVDIGRRFP--AGRDNDASPGIDRSTVLVLSTDTDGR 251
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
LR GE LS +LLE T+ G+ATC LTH+ E SR+++R L RG PQALIRVG
Sbjct 252 EAWLRAGEALSAVLLEATVGGLATCPLTHMTELRQSREMIRELVPDRGFPQALIRVGTTE 311
Query 301 PLAAVPAPTPRRPLDSVLQI 320
+ P TPRRP++SV I
Sbjct 312 K-KSPPRQTPRRPVESVFSI 330
>gi|226359602|ref|YP_002777380.1| hypothetical protein ROP_01880 [Rhodococcus opacus B4]
gi|226238087|dbj|BAH48435.1| hypothetical protein [Rhodococcus opacus B4]
Length=328
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/320 (43%), Positives = 182/320 (57%), Gaps = 7/320 (2%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V++ AV LACRAPSVHNSQPW+W G + L+ R R + +TD +GRQ ++SCGA
Sbjct 10 VVRIAVDLACRAPSVHNSQPWQWTYTDGQ----LDLYTARGRVLASTDPTGRQLVVSCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
L HL+ A+TA W A++ R P+ LAT+ F + + AI R +DR
Sbjct 66 ALHHLQTALTALKWAADVRRVPEGPHSGHLATIRFRHEARPQSHDFDLLAAIRHRHSDRR 125
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF AL D V + L V+ + R L A++ + R+ D Y AEL W
Sbjct 126 PFGPVSVKTPLPAALNDVVHRRDVNLTVLRQEARPTLARATETTAAARKYDTAYQAELHW 185
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
W + G+PPD LA+ +R RVD+GR FP + + A DRS VLVLST +D R
Sbjct 186 WAGHSIAQGGIPPDALATADDRDRVDIGRRFP--AGLDAGATTEPDRSTVLVLSTAADGR 243
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAP 300
+ LR GE LS +LLE T+ G++TC LTH+ E RDI+R L RG PQALIRVG
Sbjct 244 GEWLRAGEALSAVLLEATVGGLSTCPLTHMTELRQGRDIIRDLLPDRGFPQALIRVGTTE 303
Query 301 PLAAVPAPTPRRPLDSVLQI 320
+A P TPRRP++SVL +
Sbjct 304 KKSA-PRQTPRRPVESVLSV 322
>gi|145226774|gb|ABP48140.1| hypothetical protein [Rhodococcus sp. DK17]
Length=347
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 128/298 (43%), Positives = 165/298 (56%), Gaps = 6/298 (2%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V++ AV LACRAPSVHNSQPW W G + L R R + +TD +GRQ +ISCGA
Sbjct 27 VVRIAVDLACRAPSVHNSQPWHWRYAGGR----LDLHTERGRLLASTDPTGRQLVISCGA 82
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
L HL+ A+TA W +I R P+ LAT+ F + + AI R +DR
Sbjct 83 ALHHLQTALTALRWSTDIQRLPEGPHSGHLATIRFHRDARPQSHDFDLLAAIRHRFSDRR 142
Query 121 PFDSPMYWHLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEW 180
PF H +L + V + L V+ +D R L A+ + R+ D YHAEL W
Sbjct 143 PFGPVSPKHSLPRSLPELVRRQGVALTVLPEDARPVLAAATAYTAAARKYDSAYHAELHW 202
Query 181 WTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTR 240
W + G+P + LA+ RVD+GR FP AE+ DRS VLVLST SD R
Sbjct 203 WVGHSIPTGGIPAEALATADNSARVDIGRRFPAGRDDGSSAEV--DRSTVLVLSTDSDGR 260
Query 241 ADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGI 298
D LR GE LS +LLE T+ G+ATC LTH+ E SR+++R L G PQALIRVG+
Sbjct 261 PDWLRAGEALSLVLLEATVGGLATCPLTHMTECRPSREMIRELLPDGGYPQALIRVGV 318
>gi|54024736|ref|YP_118978.1| hypothetical protein nfa27670 [Nocardia farcinica IFM 10152]
gi|54016244|dbj|BAD57614.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=333
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/312 (45%), Positives = 173/312 (56%), Gaps = 6/312 (1%)
Query 9 ACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGAVLDHLRIA 68
A RAPS+HN+QPWRW + G E + LF + R + A D +GRQ +ISCGA+L H+R A
Sbjct 25 AARAPSLHNTQPWRWEFD-GRE---LRLFRDDDRLLDAADPNGRQLVISCGAMLHHVRTA 80
Query 69 MTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRLPFDSPMYW 128
AA W + R P P++PD LA + F P G R RA+AI RRTDRLP D P
Sbjct 81 FAAAGWHTDTKRLPAPDRPDLLAALTFRPWPDPPPGVRVRAEAIDHRRTDRLPLDPPPDL 140
Query 129 HLFEPALRDAVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEWWTSPFVLA 188
E R D + V+ + RL AS+ S LR D Y AEL WWT
Sbjct 141 GGLEHIARKLADPHDVTVGVLDETAPARLAAASEHSTALRHYDMPYQAELRWWTGHEHGE 200
Query 189 HGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDTRADALRCGE 248
HGVP LAS E RV +GR FP RR + DR+ +LVLST DT + L GE
Sbjct 201 HGVPAHALASPDEAARVPVGRPFPPAGPSARRGD-QPDRAGLLVLSTAGDTVSSWLHAGE 259
Query 249 VLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAPPLAAVPAP 308
LS ILLECT G+ATC LTH+ E + +R ++ L + G PQ ++RVG+AP P
Sbjct 260 ALSAILLECTADGLATCPLTHITELATTRQLLANLAGRAGVPQVVVRVGVAPGNEDH-VP 318
Query 309 TPRRPLDSVLQI 320
TPRR D L +
Sbjct 319 TPRRRPDEFLTV 330
>gi|226306909|ref|YP_002766869.1| hypothetical protein RER_34220 [Rhodococcus erythropolis PR4]
gi|226186026|dbj|BAH34130.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=323
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 132/326 (41%), Positives = 173/326 (54%), Gaps = 19/326 (5%)
Query 1 VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGA 60
V++ AV LACRAPS+HNSQPWRW G + LF + R + A D +GRQ ISCGA
Sbjct 10 VVQLAVDLACRAPSLHNSQPWRWTYADGR----LQLFGDHRRLLRAADPTGRQLHISCGA 65
Query 61 VLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRL 120
LDHLR+ + W A+I + P+ ATVEF + + AI +RRTDR
Sbjct 66 ALDHLRVGLLGLRWSADIHYEDRGVSPNLFATVEFRHDARPRSHDFDMLAAIRRRRTDRR 125
Query 121 PFDSPMYWHLFEP--ALRDAVDKDVAMLD----VVSDDQRTRLVVASQLSEVLRRDDPYY 174
F LF+ L D V + LD V+ DQR L+ A++ S RR D Y
Sbjct 126 AFG------LFDAIDELTDCVAEVGRKLDIGVTVLDSDQRAGLLRATEASAAARRYDSEY 179
Query 175 HAELEWWTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLS 234
AEL WW + + G+P +L S V + R FP R + A D S VL +
Sbjct 180 QAELHWWAGHSMSSGGIPETSLVSGGGS--VPIARTFPARRNAAMGDQGAIDESTVLAIG 237
Query 235 TPSDTRADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALI 294
T +DTR D LRCG+VLS+ILLE T+ G ATC L+H+ E SR ++ L + G PQ L+
Sbjct 238 TTTDTRRDWLRCGQVLSSILLEATVRGAATCPLSHMTEVPGSRALLNRLVPEVGVPQMLV 297
Query 295 RVGIAPPLAAVPAPTPRRPLDSVLQI 320
R+G AP P T RR + VL +
Sbjct 298 RIGRAPG-GTPPVMTTRRSMSEVLTV 322
Lambda K H
0.320 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 629895873072
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40